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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP012512 Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-4, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP012509 Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP012510 Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-2, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP012508 Piscirickettsia salmonis strain PM32597B1 chromosome, complete genome 2 crisprs DEDDh,cas3,DinG,csa3 0 0 32 0
NZ_CP012511 Piscirickettsia salmonis strain PM32597B1 plasmid pPSB1-3, complete sequence 0 crisprs NA 0 0 2 0

Results visualization

1. NZ_CP012510
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 26126 : 37376 14 Moraxella_phage(25.0%) tail,transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP012511
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 130296 120 Streptococcus_phage(44.23%) integrase,transposase,portal attL 18329:18388|attR 70723:71237
DBSCAN-SWA_2 166313 : 171244 7 Streptococcus_phage(42.86%) portal,transposase,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP012508
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012508_1 1098271-1098366 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP012508_2 1656178-1656287 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3091 : 61662 54 Escherichia_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_2 191889 : 322697 113 Acinetobacter_phage(11.76%) tail,transposase,protease,tRNA NA
DBSCAN-SWA_3 330663 : 384077 49 Staphylococcus_phage(57.14%) transposase NA
DBSCAN-SWA_4 441074 : 563458 108 Staphylococcus_phage(24.14%) transposase,tRNA NA
DBSCAN-SWA_5 571955 : 679071 111 Acinetobacter_phage(19.35%) transposase,protease,tRNA NA
DBSCAN-SWA_6 686427 : 758657 53 Staphylococcus_phage(44.44%) transposase,tRNA NA
DBSCAN-SWA_7 771130 : 831354 51 Acinetobacter_phage(27.27%) transposase NA
DBSCAN-SWA_8 845017 : 893343 40 Bacillus_virus(16.67%) transposase,protease,integrase attL 871096:871155|attR 887253:887749
DBSCAN-SWA_9 902829 : 1045434 118 Staphylococcus_phage(19.23%) protease,transposase,tRNA NA
DBSCAN-SWA_10 1050646 : 1112271 55 Bacillus_phage(22.22%) protease,transposase,tRNA NA
DBSCAN-SWA_11 1119135 : 1153277 30 Acinetobacter_phage(33.33%) transposase NA
DBSCAN-SWA_12 1193753 : 1242139 41 uncultured_Mediterranean_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_13 1253036 : 1299666 38 uncultured_Caudovirales_phage(12.5%) transposase NA
DBSCAN-SWA_14 1361899 : 1402305 38 Tupanvirus(22.22%) transposase,tRNA NA
DBSCAN-SWA_15 1568534 : 1584105 14 unidentified_phage(25.0%) transposase NA
DBSCAN-SWA_16 1599092 : 1652358 54 Staphylococcus_phage(33.33%) transposase,protease,integrase attL 1600160:1600219|attR 1658726:1659266
DBSCAN-SWA_17 1674718 : 1793213 100 Acinetobacter_phage(14.81%) transposase,tRNA NA
DBSCAN-SWA_18 1799630 : 1846356 39 Acinetobacter_phage(50.0%) plate,transposase,tRNA NA
DBSCAN-SWA_19 1876111 : 1989612 97 Staphylococcus_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_20 2007114 : 2074403 49 Acinetobacter_phage(22.22%) transposase NA
DBSCAN-SWA_21 2084510 : 2135609 48 Acinetobacter_phage(27.27%) transposase NA
DBSCAN-SWA_22 2150772 : 2212557 56 Acinetobacter_phage(20.0%) transposase,protease,tRNA NA
DBSCAN-SWA_23 2236522 : 2280803 41 Staphylococcus_phage(45.45%) transposase,integrase attL 2237956:2238015|attR 2280759:2282300
DBSCAN-SWA_24 2335721 : 2388301 45 Synechococcus_phage(14.29%) transposase,tRNA NA
DBSCAN-SWA_25 2405923 : 2424403 15 Staphylococcus_phage(28.57%) transposase,protease NA
DBSCAN-SWA_26 2457885 : 2505300 44 Staphylococcus_phage(40.0%) plate,transposase,tRNA NA
DBSCAN-SWA_27 2530600 : 2575168 37 Escherichia_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_28 2634725 : 2687818 49 Staphylococcus_phage(22.22%) transposase NA
DBSCAN-SWA_29 2730778 : 2790902 56 Staphylococcus_phage(18.18%) transposase NA
DBSCAN-SWA_30 2794555 : 2833887 43 Staphylococcus_phage(33.33%) protease,transposase,tRNA NA
DBSCAN-SWA_31 2917548 : 3028386 102 Staphylococcus_phage(13.33%) protease,transposase,tRNA NA
DBSCAN-SWA_32 3061380 : 3122848 56 Acinetobacter_phage(33.33%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP012512
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 21561 : 31760 15 unidentified_phage(37.5%) head,transposase,tail,capsid,terminase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage