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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009158 Glaesserella parasuis strain SH03 chromosome, complete genome 7 crisprs PD-DExK,DEDDh,WYL,cas3,cas2 6 3 15 0

Results visualization

1. NZ_CP009158
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_1 196288-196386 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_3 487252-487392 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_2 487017-487185 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_4 576642-576996 Orphan NA
4 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_6 1493012-1493152 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_5 1492778-1492946 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009158_7 2261836-2261939 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009158_4 4.3|576844|50|NZ_CP009158|CRISPRCasFinder 576844-576893 50 NZ_CP009158.1 1812985-1813034 0 1.0
NZ_CP009158_3 3.1|487276|39|NZ_CP009158|CRISPRCasFinder 487276-487314 39 NZ_CP009158.1 268439-268477 1 0.974
NZ_CP009158_4 4.4|576925|41|NZ_CP009158|CRISPRCasFinder 576925-576965 41 NZ_CP009158.1 268586-268626 1 0.976
NZ_CP009158_4 4.4|576925|41|NZ_CP009158|CRISPRCasFinder 576925-576965 41 NZ_CP009158.1 944254-944294 1 0.976
NZ_CP009158_6 6.1|1493036|39|NZ_CP009158|CRISPRCasFinder 1493036-1493074 39 NZ_CP009158.1 268439-268477 1 0.974
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NZ_CP009158.1 661953-661982 2 0.933
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NZ_CP009158.1 661953-661982 2 0.933

1. spacer 4.3|576844|50|NZ_CP009158|CRISPRCasFinder matches to position: 1812985-1813034, mismatch: 0, identity: 1.0

ctaaaggagatagaggtccaaaaggtgatacaggtgagagaggtgcaact	CRISPR spacer
ctaaaggagatagaggtccaaaaggtgatacaggtgagagaggtgcaact	Protospacer
**************************************************

2. spacer 3.1|487276|39|NZ_CP009158|CRISPRCasFinder matches to position: 268439-268477, mismatch: 1, identity: 0.974

gtgaaccgggtcctaaaggtgaacaaggtattccaggcc	CRISPR spacer
gtgaaccaggtcctaaaggtgaacaaggtattccaggcc	Protospacer
*******.*******************************

3. spacer 4.4|576925|41|NZ_CP009158|CRISPRCasFinder matches to position: 268586-268626, mismatch: 1, identity: 0.976

acaaaggtgatacgggtccagcaggaccacgaggccctgcg	CRISPR spacer
acaaaggtgatacgggtccagcaggaccacaaggccctgcg	Protospacer
******************************.**********

4. spacer 4.4|576925|41|NZ_CP009158|CRISPRCasFinder matches to position: 944254-944294, mismatch: 1, identity: 0.976

acaaaggtgatacgggtccagcaggaccacgaggccctgcg	CRISPR spacer
acaaaggtgatacgggtccagcaggaccaccaggccctgcg	Protospacer
****************************** **********

5. spacer 6.1|1493036|39|NZ_CP009158|CRISPRCasFinder matches to position: 268439-268477, mismatch: 1, identity: 0.974

gtgaaccgggtcctaaaggtgaacaaggtattccaggcc	CRISPR spacer
gtgaaccaggtcctaaaggtgaacaaggtattccaggcc	Protospacer
*******.*******************************

6. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to position: 661953-661982, mismatch: 2, identity: 0.933

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gtccaacgggtccagcaggaccacaaggcc	Protospacer
**** .************************

7. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to position: 661953-661982, mismatch: 2, identity: 0.933

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gtccaacgggtccagcaggaccacaaggcc	Protospacer
**** .************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 MK494124 Mycobacterium phage Kristoff, complete genome 2323-2352 5 0.833
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 MN586038 Mycobacterium phage WalterMcMickey, complete genome 2157-2186 5 0.833
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 JX411619 Mycobacterium virus Rebeuca, complete genome 2324-2353 5 0.833
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NC_041982 Mycobacterium phage Twister, complete genome 2157-2186 5 0.833
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 MK494124 Mycobacterium phage Kristoff, complete genome 2323-2352 5 0.833
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 MN586038 Mycobacterium phage WalterMcMickey, complete genome 2157-2186 5 0.833
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 JX411619 Mycobacterium virus Rebeuca, complete genome 2324-2353 5 0.833
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NC_041982 Mycobacterium phage Twister, complete genome 2157-2186 5 0.833
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 1105772-1105801 6 0.8
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 MG925349 Mycobacterium phage Mendokysei, complete genome 2648-2677 6 0.8
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 1105772-1105801 6 0.8
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 MG925349 Mycobacterium phage Mendokysei, complete genome 2648-2677 6 0.8
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 506-535 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 6835-6864 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 10193-10222 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 KU716094 Mycobacterium phage Eidsmoe, complete genome 4673-4702 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 MH371122 Mycobacterium phage Priya, complete genome 4674-4703 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NC_023716 Mycobacterium virus Alma, complete genome 4674-4703 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 MG872835 Mycobacterium phage Conquerage, complete genome 4673-4702 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 506-535 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 6835-6864 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 10193-10222 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 KU716094 Mycobacterium phage Eidsmoe, complete genome 4673-4702 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 MH371122 Mycobacterium phage Priya, complete genome 4674-4703 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NC_023716 Mycobacterium virus Alma, complete genome 4674-4703 7 0.767
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 MG872835 Mycobacterium phage Conquerage, complete genome 4673-4702 7 0.767
NZ_CP009158_3 3.2|487339|30|NZ_CP009158|CRISPRCasFinder 487339-487368 30 NZ_CP054620 Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence 17585-17614 8 0.733
NZ_CP009158_6 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder 1493099-1493128 30 NZ_CP054620 Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence 17585-17614 8 0.733
NZ_CP009158_7 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder 2261871-2261904 34 NZ_CP012107 Bacillus thuringiensis strain HS18-1 plasmid pHS18-8, complete sequence 4646-4679 9 0.735
NZ_CP009158_7 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder 2261871-2261904 34 NZ_CP009710 Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence 24762-24795 11 0.676
NZ_CP009158_7 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder 2261871-2261904 34 NC_006154 Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence 17818-17851 11 0.676
NZ_CP009158_7 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder 2261871-2261904 34 NC_006154 Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence 18587-18620 11 0.676

1. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to MK494124 (Mycobacterium phage Kristoff, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

2. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to MN586038 (Mycobacterium phage WalterMcMickey, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

3. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to JX411619 (Mycobacterium virus Rebeuca, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

4. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NC_041982 (Mycobacterium phage Twister, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

5. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to MK494124 (Mycobacterium phage Kristoff, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

6. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to MN586038 (Mycobacterium phage WalterMcMickey, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

7. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to JX411619 (Mycobacterium virus Rebeuca, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

8. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NC_041982 (Mycobacterium phage Twister, complete genome) position: , mismatch: 5, identity: 0.833

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gacccacgggtccagcaggaccgcaaggcg	Protospacer
* **..****************.****** 

9. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.8

gtcctgc-gggtccagcaggaccacaaggcc	CRISPR spacer
-cccggtggggtccaccaggaccacgaggcc	Protospacer
 .** *. ******* *********.*****

10. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to MG925349 (Mycobacterium phage Mendokysei, complete genome) position: , mismatch: 6, identity: 0.8

gtcctgcgggtccagcaggac---cacaaggcc	CRISPR spacer
gtactgcgggtccagcaggacagacgccag---	Protospacer
** ******************   *.* **   

11. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.8

gtcctgc-gggtccagcaggaccacaaggcc	CRISPR spacer
-cccggtggggtccaccaggaccacgaggcc	Protospacer
 .** *. ******* *********.*****

12. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to MG925349 (Mycobacterium phage Mendokysei, complete genome) position: , mismatch: 6, identity: 0.8

gtcctgcgggtccagcaggac---cacaaggcc	CRISPR spacer
gtactgcgggtccagcaggacagacgccag---	Protospacer
** ******************   *.* **   

13. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

14. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

15. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

16. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to KU716094 (Mycobacterium phage Eidsmoe, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

17. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to MH371122 (Mycobacterium phage Priya, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

18. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NC_023716 (Mycobacterium virus Alma, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

19. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to MG872835 (Mycobacterium phage Conquerage, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

20. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

21. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

22. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagatcctggtccaacaggaccacaaggcg	Protospacer
*   * * ******.************** 

23. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to KU716094 (Mycobacterium phage Eidsmoe, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

24. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to MH371122 (Mycobacterium phage Priya, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

25. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NC_023716 (Mycobacterium virus Alma, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

26. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to MG872835 (Mycobacterium phage Conquerage, complete genome) position: , mismatch: 7, identity: 0.767

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gagccaccggtccagcaggcccacaaggcg	Protospacer
*  *..* *********** ********* 

27. spacer 3.2|487339|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gtccggcaggtccagcaggaccaggaactg	Protospacer
**** **.*************** .*. . 

28. spacer 6.2|1493099|30|NZ_CP009158|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

gtcctgcgggtccagcaggaccacaaggcc	CRISPR spacer
gtccggcaggtccagcaggaccaggaactg	Protospacer
**** **.*************** .*. . 

29. spacer 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder matches to NZ_CP012107 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-8, complete sequence) position: , mismatch: 9, identity: 0.735

ttgtgagtaaaaaaataaaaggaaattgagatgg	CRISPR spacer
tcttgagcgaaaaaataaaaggaaattttcaacg	Protospacer
*. ****..******************   *  *

30. spacer 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder matches to NZ_CP009710 (Yersinia pseudotuberculosis IP 32953 strain IP32953 plasmid pYAC_2, complete sequence) position: , mismatch: 11, identity: 0.676

ttgtgagtaaaaaaataaaaggaaattgagatgg	CRISPR spacer
tcgtgagaaaaaaaataaaaggcaatgtcagccc	Protospacer
*.***** ************** ***   ...  

31. spacer 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder matches to NC_006154 (Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence) position: , mismatch: 11, identity: 0.676

ttgtgagtaaaaaaataaaaggaaattgagatgg	CRISPR spacer
tcgtgagaaaaaaaataaaaggcaatgtcagccc	Protospacer
*.***** ************** ***   ...  

32. spacer 7.1|2261871|34|NZ_CP009158|CRISPRCasFinder matches to NC_006154 (Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence) position: , mismatch: 11, identity: 0.676

ttgtgagtaaaaaaataaaaggaaattgagatgg	CRISPR spacer
tcgtgagaaaaaaaataaaaggcaatgtcagccc	Protospacer
*.***** ************** ***   ...  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 20289 : 28670 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 34458 : 43914 16 Mannheimia_phage(66.67%) NA NA
DBSCAN-SWA_3 48234 : 59745 13 Mannheimia_phage(36.36%) NA NA
DBSCAN-SWA_4 130783 : 169848 42 Mannheimia_phage(75.0%) tail,transposase,terminase NA
DBSCAN-SWA_5 181871 : 190050 14 Mannheimia_phage(66.67%) NA NA
DBSCAN-SWA_6 193915 : 224378 39 Mannheimia_phage(80.0%) tail,terminase NA
DBSCAN-SWA_7 348741 : 400237 52 Pseudomonas_phage(15.38%) transposase,tRNA,terminase,protease,integrase attL 361376:361391|attR 409331:409346
DBSCAN-SWA_8 473897 : 481391 7 Mollivirus(14.29%) tRNA NA
DBSCAN-SWA_9 543835 : 549843 10 Mannheimia_phage(44.44%) NA NA
DBSCAN-SWA_10 557267 : 562606 11 Mannheimia_phage(85.71%) tail,capsid,terminase NA
DBSCAN-SWA_11 646242 : 702344 61 Mannheimia_phage(44.83%) transposase,tRNA,terminase,tail,integrase attL 661811:661848|attR 709934:709971
DBSCAN-SWA_12 752254 : 766068 10 Bacillus_virus(12.5%) NA NA
DBSCAN-SWA_13 1399825 : 1494952 75 uncultured_Caudovirales_phage(22.22%) transposase,tRNA,terminase,protease,head,tail,portal,integrase attL 1393293:1393308|attR 1466697:1466712
DBSCAN-SWA_14 1602133 : 1610504 13 Haemophilus_phage(100.0%) transposase,integrase attL 1596588:1596601|attR 1610360:1610373
DBSCAN-SWA_15 1876184 : 1940125 57 Shigella_phage(17.65%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage