CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008796	Thermodesulfobacterium commune DSM 2178 chromosome, complete genome	2 crisprs	Cas9_archaeal,cas3,cas6,cas3HD,csa5gr11,cas7,cas5,cas4,cas1,cas2,csx1,DEDDh	0	2	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008796_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008796_1

1356859-1357792

Orphan

Consensus_repeat	Method
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	PILER-CR
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CRISPRCasFinder
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CRT

12 spacers

The CRISPR arrays of NZ_CP008796_1

>merge|NZ_CP008796|1|1356859-1357792|PILER-CR,CRISPRCasFinder,CRT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACTAACCTTTACTTCAACTTTTACTTTTTCCTTTTCCTTTTTGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACTGATAGTCAAGGGGCTTCATGTCAATTGAAGCTACCAATGTGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACTTATTGTCCTACTTACTTCTTGTTGATTTTGTTCGTCCATAAGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACAAGGGGATTATAGAACTCAAAGTTTGAAGGATTGTATTGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACTCCTCTTTTTCTTCTCCTAATCTTACCTCACCTGTCCATTGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACCTATCACAAGGTATCCCATCATGCGGACAATGATCAATGGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACAAATCGACTGTTACCTCAACTTTTACTCTTTCCATCGGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACCCAACACTTCAAAGGCAGTGTTGCAATCAGTCTTCCCCTAAAAAGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACCACCTCCCCCTCTTTTTCTATTTTATTTATCTTCTCTTCCAAGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACCCATTGCCCCCATTCCAAACTCTTCCCACACACTCCCTCCCTGAGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACTATAATACCTAAACCTCATCCTTCATCTCCTCCTTCGTAGAAACCTGCCCTACTTCAAAAGGGATTGCGACATGTCCTAGGTTTTCTCCCTTGGACGATTTGCCCAAGTAGAAACCTGCCCTACTTCAAAAGGGATTGGGAT

>NZ_CP008796|1|1|1356859-1357721|PILER-CR
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TAACCTTTACTTCAACTTTTACTTTTTCCTTTTCCTTTTT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TGATAGTCAAGGGGCTTCATGTCAATTGAAGCTACCAATGT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TTATTGTCCTACTTACTTCTTGTTGATTTTGTTCGTCCATAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAGGGGATTATAGAACTCAAAGTTTGAAGGATTGTATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TCCTCTTTTTCTTCTCCTAATCTTACCTCACCTGTCCATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CTATCACAAGGTATCCCATCATGCGGACAATGATCAATG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAATCGACTGTTACCTCAACTTTTACTCTTTCCATCG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCAACACTTCAAAGGCAGTGTTGCAATCAGTCTTCCCCTAAAAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CACCTCCCCCTCTTTTTCTATTTTATTTATCTTCTCTTCCAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCATTGCCCCCATTCCAAACTCTTCCCACACACTCCCTCCCTGA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TATAATACCTAAACCTCATCCTTCATCTCCTCCTTC
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC

>NZ_CP008796|1|1|1356859-1357792|CRISPRCasFinder
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TAACCTTTACTTCAACTTTTACTTTTTCCTTTTCCTTTTT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TGATAGTCAAGGGGCTTCATGTCAATTGAAGCTACCAATGT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TTATTGTCCTACTTACTTCTTGTTGATTTTGTTCGTCCATAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAGGGGATTATAGAACTCAAAGTTTGAAGGATTGTATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TCCTCTTTTTCTTCTCCTAATCTTACCTCACCTGTCCATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CTATCACAAGGTATCCCATCATGCGGACAATGATCAATG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAATCGACTGTTACCTCAACTTTTACTCTTTCCATCG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCAACACTTCAAAGGCAGTGTTGCAATCAGTCTTCCCCTAAAAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CACCTCCCCCTCTTTTTCTATTTTATTTATCTTCTCTTCCAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCATTGCCCCCATTCCAAACTCTTCCCACACACTCCCTCCCTGA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TATAATACCTAAACCTCATCCTTCATCTCCTCCTTC
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	ATGTCCTAGGTTTTCTCCCTTGGACGATTTGCCCAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGGGAT

>NZ_CP008796|1|1|1356859-1357792|CRT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TAACCTTTACTTCAACTTTTACTTTTTCCTTTTCCTTTTT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TGATAGTCAAGGGGCTTCATGTCAATTGAAGCTACCAATGT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TTATTGTCCTACTTACTTCTTGTTGATTTTGTTCGTCCATAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAGGGGATTATAGAACTCAAAGTTTGAAGGATTGTATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TCCTCTTTTTCTTCTCCTAATCTTACCTCACCTGTCCATT
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CTATCACAAGGTATCCCATCATGCGGACAATGATCAATG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	AAATCGACTGTTACCTCAACTTTTACTCTTTCCATCG
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCAACACTTCAAAGGCAGTGTTGCAATCAGTCTTCCCCTAAAAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CACCTCCCCCTCTTTTTCTATTTTATTTATCTTCTCTTCCAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	CCATTGCCCCCATTCCAAACTCTTCCCACACACTCCCTCCCTGA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	TATAATACCTAAACCTCATCCTTCATCTCCTCCTTC
GTAGAAACCTGCCCTACTTCAAAAGGGATTGCGAC	ATGTCCTAGGTTTTCTCCCTTGGACGATTTGCCCAA
GTAGAAACCTGCCCTACTTCAAAAGGGATTGGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008796.1\|WP_000546427.1\|1361232_1362168_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP008796.1\|WP_038062159.1\|1350123_1351434_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|273080
NZ_CP008796.1\|WP_038062156.1\|1351430_1353134_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NZ_CP008796.1\|WP_038062169.1\|1342455_1343613_-\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|274638
NZ_CP008796.1\|WP_038062166.1\|1343625_1344732_-\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|224180
NZ_CP008796.1\|WP_038062148.1\|1360151_1361240_-\|DUF763-domain-containing-protein	unknown	unknown	gnl\|CDD\|377525
NZ_CP008796.1\|WP_038062144.1\|1363535_1364861_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP008796.1\|WP_038062161.1\|1347968_1348622_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552
NZ_CP008796.1\|WP_022855262.1\|1365292_1365646_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379377
NZ_CP008796.1\|WP_051754570.1\|1347244_1347964_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP008796.1\|WP_158506234.1\|1362336_1363557_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236901
NZ_CP008796.1\|WP_158506235.1\|1364862_1365333_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008796.1\|WP_038062163.1\|1344825_1347237_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP008796.1\|WP_028841889.1\|1355223_1356321_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_CP008796.1\|WP_038062150.1\|1359387_1360080_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274164
NZ_CP008796.1\|WP_028841885.1\|1348626_1350120_-\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|223225
NZ_CP008796.1\|WP_051754571.1\|1358123_1358762_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP008796.1\|WP_028841888.1\|1353188_1355207_-\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP008796.1\|WP_022855255.1\|1358766_1359387_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP008796.1\|WP_038062153.1\|1357919_1358123_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008796.1\|WP_000546427.1\|1361232_1362168_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.30199e-86
NZ_CP008796.1\|WP_038062159.1\|1350123_1351434_-\|histidine--tRNA-ligase	gnl\|CDD\|273080	TIGR00442, hisS, histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. [Protein synthesis, tRNA aminoacylation].	0
NZ_CP008796.1\|WP_038062156.1\|1351430_1353134_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	3.2528e-115
NZ_CP008796.1\|WP_038062169.1\|1342455_1343613_-\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|274638	TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation.	0
NZ_CP008796.1\|WP_038062166.1\|1343625_1344732_-\|inositol-3-phosphate-synthase	gnl\|CDD\|224180	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism].	0
NZ_CP008796.1\|WP_038062148.1\|1360151_1361240_-\|DUF763-domain-containing-protein	gnl\|CDD\|377525	pfam05559, DUF763, Protein of unknown function (DUF763). This family consists of several uncharacterized bacterial and archaeal proteins of unknown function.	7.43682e-172
NZ_CP008796.1\|WP_038062144.1\|1363535_1364861_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.28276e-169
NZ_CP008796.1\|WP_038062161.1\|1347968_1348622_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	2.84905e-120
NZ_CP008796.1\|WP_022855262.1\|1365292_1365646_-\|hypothetical-protein	gnl\|CDD\|379377	pfam13801, Metal_resist, Heavy-metal resistance. This is a metal-binding protein which is involved in resistance to heavy-metal ions. The protein forms a four-helix hooked hairpin, consisting of two long alpha helices each flanked by a shorter alpha helix. It binds a metal ion in a type-2 like centre. It contains two copies of an LTXXQ motif.	5.94672e-05
NZ_CP008796.1\|WP_051754570.1\|1347244_1347964_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.48123e-59
NZ_CP008796.1\|WP_158506234.1\|1362336_1363557_+\|hypothetical-protein	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.66492e-43
NZ_CP008796.1\|WP_038062163.1\|1344825_1347237_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP008796.1\|WP_028841889.1\|1355223_1356321_-\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	1.55165e-79
NZ_CP008796.1\|WP_038062150.1\|1359387_1360080_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274164	TIGR02495, RADICAL-ACTIVATING_ENZYME, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG, which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	1.19162e-55
NZ_CP008796.1\|WP_028841885.1\|1348626_1350120_-\|anthranilate-synthase-component-I	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	0
NZ_CP008796.1\|WP_028841888.1\|1353188_1355207_-\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP008796.1\|WP_022855255.1\|1358766_1359387_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	2.77556e-71
NZ_CP008796.1\|WP_051754571.1\|1358123_1358762_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	4.68894e-25

>NZ_CP008796.1|WP_028841889.1|1355223_1356321_-|aminopeptidase-P-family-protein
MTNEIAQKLTKVRACFERWGVDGFLFSSQANVFYLSHFRSTNAYVLMTGDNVCFLTDSRYIEKAKKELASWEVVEIKGDTIGFLKKFIQKAGVKRLGFEKDKVSCAFKEKLRSNKFKLVGVVDPLGLIRMIKSKEEIEVLKEGVKKTDKVFNKVLQEIERSFAEGYPISELKIRGFLVSQMFIVGGRGESFPAIVAFGKNSSVPHWETSEALIERNGVLLLDFGMVWKGYATDFTRTIYLGDPPAEFVKLYNILKDAWFLGFEKVKVGEKVAEIDRAIRDYLVQKDLAKYFIHATGHGIGVEVHEAPRVIYTVDPDLRIEEGMVFTIEPGLYFPDNFGIRLENMVFVEGGRGEIVSEVSLDLITL
>NZ_CP008796.1|WP_028841888.1|1353188_1355207_-|ferrous-iron-transport-protein-B
MKTIKVALIGNPNVGKTSILNHLVGANLKIGNWAGVTVEKKEGKTFFQDYEVYFVDLPGVYTLEEVVSEDEKVTLDFLLSGDYDVILNVIETPRIERDLYLTCQLLDLGKPMVLALNMIDEAQKIGISIDLERLAELLKVRVVKTVGRTGEGVKEILPAVVEAYEKQTIPFQISYPPELEEKVKAFRESTGENLSKFETLRLLESEAQELSRIIKEKRLSFTRGVANEVVKRKLIPKESLTETLDRFLLHPFFGFLSFGFIMYLFFKTSFDFSKPIIDWIDGFLQEFLAPLCAQVLEDLGVSEFLRSFIANAVFGGVGVVLSFLPLITVMYFFLTLLETSGYLPRVSFLMDRFTHKIGLHGQSVIPLILGLGCNVPAILATRTFQETKDKLLVIAMVPFISCPARLVVFSFFAFVFFQNPVAVILGLYFLGIIFSVLTGVLLRKTLLKKELSHFVMDLPPYRMPAWRTVFNITKVYVKDFLYRAGTVIFGVSVLVWLLLNLPIGEKNIENTYAAKLGKALSYVLSPVGLGDWRISTSLVSGFLAREAILSNLGVIVSEEKEDGLEKIDPKEKAKEEFFKLGEALKQSFTSLFSFFPASFSVEEEEGSLKEKIKGLMNFKQALSLLVFVLIYNSCAATVITMAREGNVKFALGFLVYSFVLAWMLAFLVFRLV
>NZ_CP008796.1|WP_038062156.1|1351430_1353134_-|FAD-dependent-oxidoreductase
MRVLVIGAVACGTRAACRLKRLRPDAEILMIDQDQYISYGGCGMPYYLTGDVSHIDELRRTTFHAIRDERFFKEAKGIEVLTRVKAEEIDRRKKTVKVRWLDTGKTEEIGYDKLVLATGTKPKVPPIPGVDLEGVHTLSNLHDAIRIKEKLVKGEVKNPLVIGAGFIGLEVVEAFGESWGLPVTLLEYFPQVLPRLIDPVLSRIIENHLRKKGVKVVLNARIKEIVGKNGKVVGVRTEDGFYPADLVLLATGVIPNTDLAKQAGLLVSPLTGGIVVNERMQTSDPDIYAGGDCVEVVHLITGKRMLMPQGSLANKQGRVIGTNLAGGYARFKGTIGAFILKCFDMSIGGCGISLGVAKAEGFVDATYALNIQHERAHFFSIGCSYYNLVFDKRTGKVLGFQSVGPYTDGTLARVHAMSTLLLEKPSVADLVELELAYSPPFNTALDPINVVGHVAENLIFERFKPIEWEEVLRRLRERDRDLLIVDVRTPEEAKEMVQRYPNWINLPYQGAKEAIKTLPKDKDLVVVCSVGTRSYEVVRWLKAEGYDRVFMPMGGVVLAKSWGEDVR
>NZ_CP008796.1|WP_038062159.1|1350123_1351434_-|histidine--tRNA-ligase
MKLQAVRGFKDWLPEDFVKYEYLIEKARLWCKLFNFKEIKIPILEKTELFVRSIGEVTDIVQKETYSFEDRNKDWLTLRPEATAGICRMVIEHGLYVRPKPLKFFTIGPMFRHERPQKGRLREFFQIDLEVFSELNPYLEAEVIFLALKILKSPLPEESDQLYTLELNTLGCPECRPKYREALLSFLREHKDEVCETCKERIERNPLRVLDCKNEGCKKVVSGSPLITDFLCEDCKTHFQELKEALQSLDIEFSLNPRLVRGLDYYVRTIFEIKAKGLGAQDTVCAGGRYDYLVKELGGPELPAIGFAIGLERWAISLFGDEENKGLLDPNTLTEKLCPDLYLVFLGKPLIKQGVILSQKLREKGLRCETTYEEKSLKAQLKNADKLGANFVLILGEKEWAEKRAVFRDLKKSAQKEIGFDGLDDLVAKVVKEVKG
>NZ_CP008796.1|WP_028841885.1|1348626_1350120_-|anthranilate-synthase-component-I
MSLKVFPEKEVFIDLAKKHNLVPVYTEVACDLDTPISLFYKIGEGSYSFLLESLEGGEKWARYSFIGIDPYLVFKSKGNQINLLEKQGDRLVSKQEFFSDNPFYELRKFIKKIDCAVLDGLPRFFGGAVGFIGYEVVRLFEKIPVGEDVLGFSDLHFMFPEVVLIYDRFKHTLKIVYNANIDLNEDPSKIYQKAIHRLSEIKHRLSGFYSNGQSVEKVNVSSPQPEITKEEFCSMVEQAKRYILEGDIIQVVLSQRFRFRSQGSPFLFYRALRKINPSPYLFFLKLDDEVLIGSSPEILVRMEGSLVETRPIAGTRRRGKTEKEDKELEEDLKRDEKELAEHIMLVDLGRNDLGRVCKYGSVEVYELMVVERYSHVMHLVSGVKGEVLPGLDMFDVFAATFPAGTVSGAPKIRAMEIISELEKTVRGPYAGAVGYFGFSGNMDFCITIRTLFQKGELCYLQAGAGIVADSDPEKEYEETLNKAKAIFKAIETLGEFC
>NZ_CP008796.1|WP_038062161.1|1347968_1348622_-|aminodeoxychorismate/anthranilate-synthase-component-II
MKRIIVIDNYDSFTYNLVQLIGIMLEKLWGGEIKVFRNDAVSTEEVLKLKPDYLVISPGPCTPKEAGISVELIKKVAGKVPILGVCLGHQSIGYAFGAKIVKAKRLMHGKVSQIYHDGKGVFTGLPNPFQAMRYHSLAIDPGTLPEYFEVTARAEDGEIMGIRHKEYPIEGVQFHPESIGTSLERWMKYSLPPKDWDFSKEDLPEGVILLRNFFTVY
>NZ_CP008796.1|WP_051754570.1|1347244_1347964_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MEKVAEVLRNFLCWVYCLVTVPVFGSLALLIRKHFWARIWCKGLLKVLGIEIKVYQEIDLPKGSYVFMSNHQSQLDIPVLEKVLEAYNIRFLAKKSLFNIPFFGWGLKALGYVPVEREDPKEGFKSILACVERLKEGVSLVVFPEGTRSKDGDLLPFKLGGFLIPIKAQVKVVPVSLWGTKDILPKGSLWLKVGKRRKVGVYLGAPIETTGLSLRDKQVLAQQVKESILKGIEHLKKEV
>NZ_CP008796.1|WP_038062163.1|1344825_1347237_-|DNA-gyrase-subunit-A
MSEVITVSLEEELKESYLDYAMSVIVGRALPDVRDGLKPVQRRILYAMYETGNDWNKPYKKSARIVGEVIGKYHPHGDMPVYESIVRMAQDFTMRYPLIDGQGNFGSVDGDAPAAMRYTEVRLAKIAHELLADIEKETVEFVPNYDNTLKEPVVLPSKIPNLLINGSSGIAVGMATSIPPHNLSEVINGLIFLLRNPEASVEDLMQYIKGPDFPTGAYIVGTEGIKQAYTTGRGSIKLKAKHKIEREKDKVRIVFDEIPYQVSKAKVVEKIAQLAKDKKIEGIAEVRDESDREGIRIVVELKKEWANAPYTILKKIYEMTPLQTSFGVIMLALVNGKPEVLNLKDILQNFLNWRKTVIIRRTQYELRKSKERLHILEGFLKALSHIDEIIELIKKSQTPKEAKEALIKRFDFSEIQAQEILNLRLQRLTALEREKILLEYEEIKRAISYYEKILTHEPTLLAVVEEELKEIKEKYGDERRTQIIFEDDSDEVIQEEKLPSEEVLFLISEEGYVRKLPLELFSPQKRGGKGSLAFTSEERLKVAIQTEATAVLWIFTEDGKVYPLDLRELSFSGKTVKGTYIKNLLPNLESPVSFVLPPAEEGFLVLATAKGIVKKLEIEELKNLRKNGLIVISLKKGDRLCKGVITNGNDRLLFLTKKGMSLHFEEEELGVTKRQAEGVVGIRLDANDEVLGLIKTSSQGYLFTITEKGFGKKTPFSDFRLQGRGGKGIIAHGLNEKTGYLADGVATFEKEDFVVFSSSGKAIRISSQDVPQQGRATKGVRIITLLPGEIVMGITPIRIEEKT
>NZ_CP008796.1|WP_038062166.1|1343625_1344732_-|inositol-3-phosphate-synthase
MSKTVKVAIAGVGNCASSLVQGVFYYKEVDLSKIHGIMFPKIGDYKPSDIEFVAAWDVDARKVGKDLSEAIFSPPNCTTIFYRDVPKLNVKVRKGKVLDGVANHMFNFPVDKSFQISPEKEDSLEDMVAVLKETQADVLINYVPVGSEQAARFYAEVCLKAGVAFVNAMPTFIVSDPEWGARFEKEGIPAVGDDIKSQLGATILHRTLVQLFIDRGIPLKRTYQLNFGGNTDFLNMLERGRLKTKKISKTEAVTSLLPYDIGWENVHIGPSDWVPWLKDKKIAYIRLEGEHFGGVPLSVEVKLEVEDSPNSAGSALDAIRCAKLAKDRGIGGPLLSISAYTMKHPPKQFPDHIARQMVLEFIEGKRER
>NZ_CP008796.1|WP_038062169.1|1342455_1343613_-|LL-diaminopimelate-aminotransferase
MELSNRLKKVPPYLFVEIDRLKSEKLKEGADVIDLGIGDPDLPTPAEIVEVAKRALEKPENHKYPSNAGAFFYRKACADYMKRRFGLDFDPETEVTTLIGSKEGIAHFPIAFVNPGDIVLCPDPGYPVYHLGAIFTDGEPFYLPLTWENDFLPDFTKVPTQILERTKILWLNYPNNPTGATASKEFFKEVIALAKKYNFIVAHDAAYIEMYYEEPPISIFEVEGAKEIAIEFHSLSKTFCMTGWRIGFAVGNATLVSALAKVKSNIDSGAFTAIQEAGAYALNNLEKITPSLIKVFKERRDFLCAELERLGYQLKKPSATFYLWVKVPEGMDSREFCKKVLQDLAIVVTPGVGFGSAGEGYFRIALTVDIQRLKEAVGRLATLKF
>NZ_CP008796.1|WP_038062153.1|1357919_1358123_+|hypothetical-protein
MSTGKIVNLENKNKTAEDFKLSPLEEITLKTTKEIVIKFIEMGRCSPATFEEVFTQVFSVIKKTLTK
>NZ_CP008796.1|WP_051754571.1|1358123_1358762_+|flavodoxin-family-protein
MQLLAIHASPRSQGNSEIFLDAFLSTLNHQKIKTEKIKLTELKFSPCVECGGCEKDGTCILKDDLTEVYPKILKANFLVVATPIFFYSHPSFLQAFFERFQAFWVSKYLLKAPPPSQKPKGILLALGATKGKKVFECLVRSFKYVLDTIDGEYIGGIFLRGIDKKGEILKHLEGLEKVKTLGEKLSILEKKDLTKSKEELAQFLGLDLDPTP
>NZ_CP008796.1|WP_022855255.1|1358766_1359387_-|thiamine-phosphate-synthase
MVLKGFYVITDEVLTPYQDGEIFRMVEKALKGGAKFVQLRDKNSDLEVLTNIAIELKKLCHRFGAYFIVNDRVDLAAKVLADGVHVGKDDQPLSQVKEIFKGPIIGVSCYGDLRRAMEAEKQGATYVAFGSFYPSPTKPNSTVVDKTLIPLAKKTLKIPVCAIGGITLERAKELVQLGADMVAVISDLWKDNDIEGKARAYAKLFE
>NZ_CP008796.1|WP_038062150.1|1359387_1360080_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MIKGFIGTSLVDYPGKISSVIFTYGCNYRCPFCYNVDLVLPERYKKLKNLSEDWVIEELKRRKGFIKGVVITGGEPTLWGKRLVSFIEEVRSQTGLPVKLDTNGSSPELVEELVISGLVDFFAIDFKTSPDRYAELGGDFALVEQTFRVLKNIADRVEIRVTMYPPLLTEKDLEKMVPYLAWFKRIALQKFVQENTLKKDLVGEVNPEFYHRVDAYLKERLPEVSIVKRY
>NZ_CP008796.1|WP_038062148.1|1360151_1361240_-|DUF763-domain-containing-protein
MVSRSIVDLPLHGGKCPPWLFERMVRLSRAILLLVYQEFGAKELIKRLSDPFWFQALGCLLGFDWHSSGLTTTVGGAIKEALKPYFNDLGIYVCGGKGKRALNTPQEIIFWGEKQGLPKQAYKFVTLSRLTARIDNNAIQDGFQLYFHLFIFSKDGQWGVIQQGMDEKTAYARRYQWYSEKVLDLCENPHTGIVSSVKKENVLNLVAKESKPVQNSLVRLLTEDLSLVIKELTPKVHLIFKEDHTLTLKDLSVKSLKKVWEKVYQNPPSDFQSLLLTEGMGAKTLRALTLASELIYEVKASREDPVVYSYAHGGKDGHPYRLNKQLYDTTIQELEEILRKAKLGETEKLSLFKRLPKIFNIG
>NZ_CP008796.1|WP_000546427.1|1361232_1362168_-|cation-transporter
MHHHHHGHDEKTEIRGKNLFYVALLNLLITVFEFIGGLISGSMALLSDAFHNLGDVMSVVITYFAHKISLRNPNERKTFGYKRITILASLFNSVTLLIICFFLIKKSIERLVTPSLIDVKTVFVVGSIGFLGNLLSLKFLKGSAKEDLNVKSAYLHMLGDALSSLAVMTGAVFIYYFGWVRVDSVISILIAFYIAKESLEVLLKSVDIIMQATPFHVEIPKIVEELLKIQDIQDVHHIHVWSLDDKTHFFEGHVNLKSDMNVSETAKVLQNIQKELKKFDIHHITIQFEYQGVCPECEVFHNNFLKRDKDG
>NZ_CP008796.1|WP_158506234.1|1362336_1363557_+|hypothetical-protein
MFLGISLLAGVFFIFAAVSNYQNIRKTLDTGLKLQAIGVEITLKSLIKNFGLDLIKKEKNFFAELLLGEEWEVVAYVAIYDTEGKILLHSNPELIGTKIQDRVSFNVTFPRSFYQTTLTEEKLFVYENLLKTEKQQAVLRVALHIFPVEEILGYAKKHVYLEFFLGLGFFGLGVIGFWFFKRSERLIQRIEDLERWKFISQVLAHEMKNPLASIKGFTQLILKKTPEEKTQKALNLILKETLRMEKLLQTLNSYTHPQKPNFSSFDLYSFLTEVIETFKLLYPEADLRVTLEGKNFMVVSDQDKLKEILINLLENAWQASQEAGNLRVDLGLISEKTFYIIYIKDFGKGIPQELIPKIWEPFFTTKAKGMGLGLTIVKNLCEELNCRIELKSEPSSGTEVWIKIPR
>NZ_CP008796.1|WP_038062144.1|1363535_1364861_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MDKNPSIVIVEDDTSFASFLEMTFQEENYKVWVFHNPETALFHLPELNPDIVITDLKMPGLDGITFIKKAKKILPETVFLVITAFGTIPSAVEAMKAGAVDYLTKPLSSPEELLAKVNLYLKKFKKSPSFYPADLPPLEVVFAGMEDLYEQLIEIAPTDATVCLLGETGTGKSLIAKIIHVLSGRKGPFVEINCAALPENLVEAELFGYEKGAFTGAIKTKPGKFELAREGTLFLDEISEMSLTVQAKFLRVLQDKAFERLGGLETLKTDARFIVATNKDLEKLVAEGIFREDLFYRINVFSFYLPPLRDRKKHLKTIVQYLLEKICQKLGKPLKPLSPSSWEKLENYSFPGNIRELENILERAVILSKGDMIEVEIPFKAKDLFQDKTTLKDDLQIKNLEKKAILKALEVTKGNKPEAAKLLGISLKTLYNKLKDLGLKE
>NZ_CP008796.1|WP_158506235.1|1364862_1365333_-|hypothetical-protein
MVSMVTGEGTAVGKMKVKSRAFGPGFWIFLSFFLILILTPSLNAHQFKFFQELPYDPNLEITFKGKILSVYLPPRGLASLEVEREGKAYTVFLCPVHYYRFLNPDFSAGHQVEVTGAKTYFPKYGIIFMARHVKNLTTGKLYLFRSPVAPYKPVWE
>NZ_CP008796.1|WP_022855262.1|1365292_1365646_-|hypothetical-protein
MNIKKTLALALGLGTLLTGPVFAYKGMGPQGMGRPMAPPVDQAKLQEFCKEVQPLYQREAQLRAEARSLILQPNPNWDTILAKEQELAKIRVEIMKKGHEKGLPLGKHGHWRRYCGW

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Crispr_ID: NZ_CP008796_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008796_2

1461789-1463221

TypeI-A

Consensus_repeat	Method
GTTTTGAGCCTACCTACAAGGAATTGAAAC	PILER-CR
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CRISPRCasFinder
GTTTTGAGCCTACCTANAAGGAATTGAAAC	CRT

21 spacers

cas2,cas1,cas4,cas5,cas7,csa5gr11,cas3HD,cas3

The CRISPR arrays of NZ_CP008796_2

>merge|NZ_CP008796|2|1461789-1463221|PILER-CR,CRISPRCasFinder,CRT
GTTTTGAGCCTACCTACAAGGAATTGAAACCTCCTGTTTTTCCTGAGTATTCAGCTCTTATTGACCCGGTTTTGAGCCTACCTACAAGGAATTGAAACTCAAGAGACTTGTAATAATTGTCCATCTGGATATGTTTAGTTTTGAGCCTACCTACAAGGAATTGAAACGTGCTTGGTATGATGTTTTAGAGGTTTATGTAGATGGTTTTGAGCCTACCTACAAGGAATTGAAACTAAGCAATTTTCTCAACATCTTTTATCCCCACCTCCGTGTTTTGAGCCTACCTACAAGGAATTGAAACTTTCCAGCCTTTTCCCATCTATTTCGTCCTCAAAAAGTTTTGAGCCTACCTACAAGGAATTGAAACCAAACTACTACCTTCTCCCCCAAATAATTAAAATAAGTTTTGAGCCTACCTACAAGGAATTGAAACGAAGAAGAGGTAGCTCAAAAATTAGGTATTAAAAAATGTTTTGAGCCTACCTACAAGGAATTGAAACGTTCAATACGACACATAGAAGGCTTGTGGGAACTATACGTTTTGAGCCTACCTACAAGGAATTGAAACAGGAAAAAGAAGGATAATTCTTCGGTGGAAAAATAACGTTTTGAGCCTACCTACAAGGAATTGAAACTGAATTTGTAATGAAAAGATGAAGCGAGATGTTTTTGTTTTGAGCCTACCTACAAGGAATTGAAACTGAGAACTGGAAATTATCAGTATTCAGTGCCTGAGATGTTTTGAGCCTACCTACAAGGAATTGAAACATCTATCTGTTTAGGTATCTGAAATTCAATCATTCCGGTTTTGAGCCTACCTACAAGGAATTGAAACTTTACCATGAAGGACCCCACTGATCATTCGGGAAATCGTTTTGAGCCTACCTATAAGGAATTGAAACACCGCTCCCTTTCCTATCCGAGCCAACTCAAAAGAGAGTTTTGAGCCTACCTATAAGGAATTGAAACCTTTAAACTTCCCAATCCAAGGCACAGGAGCCGAATGTTTTGAGCCTACCTATAAGGAATTGAAACACTGTTTAAATTTCTTGCTTGCCTCTTGACTATATTGGTTTTGAGCCTACCTATAAGGAATTGAAACCCCTCAGGTAATCTTGTCCTGAGAACAAAGTGTATGGGTTTTGAGCCTACCTATAAGGAATTGAAACGTTTCACCGTTCAATTCTTGCATATATCTAATTAGGTTTTGAGCCTACCTATAAGGAATTGAAACGAAGATAGCCCAGACCCAGAGCATCCACAGTGCATAAGTTTTGAGCCTACCTATAAGGAATTGAAACATGAGTCTCTTGACATTTTCTAAAAATATGTTAAAAGTTTTGAGCCTACCTATAAGGAATTGAAACATATTAATATACACAACACGTTGCCCTGCTTTATCAGTTTTGAGCCTACCTATAAGGAATTGAAAC

>NZ_CP008796|2|2|1461789-1463221|PILER-CR
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CTCCTGTTTTTCCTGAGTATTCAGCTCTTATTGACCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TCAAGAGACTTGTAATAATTGTCCATCTGGATATGTTTA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTGCTTGGTATGATGTTTTAGAGGTTTATGTAGATG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TAAGCAATTTTCTCAACATCTTTTATCCCCACCTCCGT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTCCAGCCTTTTCCCATCTATTTCGTCCTCAAAAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CAAACTACTACCTTCTCCCCCAAATAATTAAAATAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GAAGAAGAGGTAGCTCAAAAATTAGGTATTAAAAAAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTTCAATACGACACATAGAAGGCTTGTGGGAACTATAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	AGGAAAAAGAAGGATAATTCTTCGGTGGAAAAATAAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAATTTGTAATGAAAAGATGAAGCGAGATGTTTTT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAGAACTGGAAATTATCAGTATTCAGTGCCTGAGAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	ATCTATCTGTTTAGGTATCTGAAATTCAATCATTCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTACCATGAAGGACCCCACTGATCATTCGGGAAATC
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACCGCTCCCTTTCCTATCCGAGCCAACTCAAAAGAGA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CTTTAAACTTCCCAATCCAAGGCACAGGAGCCGAAT
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACTGTTTAAATTTCTTGCTTGCCTCTTGACTATATTG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CCCTCAGGTAATCTTGTCCTGAGAACAAAGTGTATGG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GTTTCACCGTTCAATTCTTGCATATATCTAATTAG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GAAGATAGCCCAGACCCAGAGCATCCACAGTGCATAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATGAGTCTCTTGACATTTTCTAAAAATATGTTAAAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATATTAATATACACAACACGTTGCCCTGCTTTATCA
GTTTTGAGCCTACCTATAAGGAATTGAAAC

>NZ_CP008796|2|2|1461789-1463221|CRISPRCasFinder
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CTCCTGTTTTTCCTGAGTATTCAGCTCTTATTGACCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TCAAGAGACTTGTAATAATTGTCCATCTGGATATGTTTA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTGCTTGGTATGATGTTTTAGAGGTTTATGTAGATG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TAAGCAATTTTCTCAACATCTTTTATCCCCACCTCCGT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTCCAGCCTTTTCCCATCTATTTCGTCCTCAAAAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CAAACTACTACCTTCTCCCCCAAATAATTAAAATAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GAAGAAGAGGTAGCTCAAAAATTAGGTATTAAAAAAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTTCAATACGACACATAGAAGGCTTGTGGGAACTATAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	AGGAAAAAGAAGGATAATTCTTCGGTGGAAAAATAAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAATTTGTAATGAAAAGATGAAGCGAGATGTTTTT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAGAACTGGAAATTATCAGTATTCAGTGCCTGAGAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	ATCTATCTGTTTAGGTATCTGAAATTCAATCATTCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTACCATGAAGGACCCCACTGATCATTCGGGAAATC
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACCGCTCCCTTTCCTATCCGAGCCAACTCAAAAGAGA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CTTTAAACTTCCCAATCCAAGGCACAGGAGCCGAAT
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACTGTTTAAATTTCTTGCTTGCCTCTTGACTATATTG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CCCTCAGGTAATCTTGTCCTGAGAACAAAGTGTATGG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GTTTCACCGTTCAATTCTTGCATATATCTAATTAG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GAAGATAGCCCAGACCCAGAGCATCCACAGTGCATAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATGAGTCTCTTGACATTTTCTAAAAATATGTTAAAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATATTAATATACACAACACGTTGCCCTGCTTTATCA
GTTTTGAGCCTACCTATAAGGAATTGAAAC

>NZ_CP008796|2|2|1461789-1463221|CRT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CTCCTGTTTTTCCTGAGTATTCAGCTCTTATTGACCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TCAAGAGACTTGTAATAATTGTCCATCTGGATATGTTTA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTGCTTGGTATGATGTTTTAGAGGTTTATGTAGATG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TAAGCAATTTTCTCAACATCTTTTATCCCCACCTCCGT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTCCAGCCTTTTCCCATCTATTTCGTCCTCAAAAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	CAAACTACTACCTTCTCCCCCAAATAATTAAAATAA
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GAAGAAGAGGTAGCTCAAAAATTAGGTATTAAAAAAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	GTTCAATACGACACATAGAAGGCTTGTGGGAACTATAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	AGGAAAAAGAAGGATAATTCTTCGGTGGAAAAATAAC
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAATTTGTAATGAAAAGATGAAGCGAGATGTTTTT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TGAGAACTGGAAATTATCAGTATTCAGTGCCTGAGAT
GTTTTGAGCCTACCTACAAGGAATTGAAAC	ATCTATCTGTTTAGGTATCTGAAATTCAATCATTCCG
GTTTTGAGCCTACCTACAAGGAATTGAAAC	TTTACCATGAAGGACCCCACTGATCATTCGGGAAATC
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACCGCTCCCTTTCCTATCCGAGCCAACTCAAAAGAGA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CTTTAAACTTCCCAATCCAAGGCACAGGAGCCGAAT
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ACTGTTTAAATTTCTTGCTTGCCTCTTGACTATATTG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	CCCTCAGGTAATCTTGTCCTGAGAACAAAGTGTATGG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GTTTCACCGTTCAATTCTTGCATATATCTAATTAG
GTTTTGAGCCTACCTATAAGGAATTGAAAC	GAAGATAGCCCAGACCCAGAGCATCCACAGTGCATAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATGAGTCTCTTGACATTTTCTAAAAATATGTTAAAA
GTTTTGAGCCTACCTATAAGGAATTGAAAC	ATATTAATATACACAACACGTTGCCCTGCTTTATCA
GTTTTGAGCCTACCTATAAGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008796.1\|WP_028841911.1\|1461363_1461627_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP008796.1\|WP_038060515.1\|1468863_1469217_+\|DUF86-domain-containing-protein	unknown	unknown	gnl\|CDD\|225236
NZ_CP008796.1\|WP_038042052.1\|1459876_1460371_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP008796.1\|WP_038060513.1\|1468574_1468871_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP008796.1\|WP_038060518.1\|1473537_1473978_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008796.1\|WP_038060500.1\|1455332_1456091_+\|CRISPR-associated-endonuclease-Cas3''	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|193608
NZ_CP008796.1\|WP_156095573.1\|1459358_1459529_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225438
NZ_CP008796.1\|WP_038060509.1\|1460367_1461360_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP008796.1\|WP_038060502.1\|1456113_1457487_+\|type-I-A-CRISPR-associated-protein-Csa5	csa5gr11	cd09653_csa5gr11_CAS-I-A	gnl\|CDD\|273849
NZ_CP008796.1\|WP_038060504.1\|1457488_1458448_+\|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	gnl\|CDD\|376656
NZ_CP008796.1\|WP_038060519.1\|1474003_1475215_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP008796.1\|WP_038060508.1\|1459580_1459874_+\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|379306
NZ_CP008796.1\|WP_038060516.1\|1470452_1473023_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|224400
NZ_CP008796.1\|WP_038060511.1\|1463243_1466549_+\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|350769
NZ_CP008796.1\|WP_038060498.1\|1453642_1455352_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP008796.1\|WP_081856538.1\|1466551_1468075_+\|DUF1156-domain-containing-protein	unknown	unknown	gnl\|CDD\|224657
NZ_CP008796.1\|WP_051754585.1\|1476257_1477424_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_CP008796.1\|WP_144241984.1\|1468071_1468563_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NZ_CP008796.1\|WP_038060506.1\|1458459_1459257_+\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|274218
NZ_CP008796.1\|WP_038060583.1\|1475175_1476246_-\|heme-b-synthase	unknown	unknown	gnl\|CDD\|275338

Protein	Function_ID	Function_description	E-value
NZ_CP008796.1\|WP_028841911.1\|1461363_1461627_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.72398e-32
NZ_CP008796.1\|WP_038060515.1\|1468863_1469217_+\|DUF86-domain-containing-protein	gnl\|CDD\|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	7.56318e-42
NZ_CP008796.1\|WP_038042052.1\|1459876_1460371_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.67645e-71
NZ_CP008796.1\|WP_038060513.1\|1468574_1468871_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	3.35373e-28
NZ_CP008796.1\|WP_038060500.1\|1455332_1456091_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|193608	cd09641, Cas3''_I, CRISPR/Cas system-associated protein Cas3''. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; HD-like nuclease, specifically digesting double-stranded oligonucleotides and preferably cleaving at G:C pairs; signature gene for Type I.	1.90227e-08
NZ_CP008796.1\|WP_156095573.1\|1459358_1459529_+\|hypothetical-protein	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	8.11262e-05
NZ_CP008796.1\|WP_038060509.1\|1460367_1461360_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.09555e-172
NZ_CP008796.1\|WP_038060502.1\|1456113_1457487_+\|type-I-A-CRISPR-associated-protein-Csa5	gnl\|CDD\|273849	TIGR01878, Uncharacterized_protein_AF_1870, CRISPR type I-A/APERN-associated protein Csa5. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents a minor family of Cas protein found in the (all archaeal) APERN subtype of CRISPR/Cas locus, so the family is designated Csa5, for CRISPR/Cas Subtype Protein 5.	9.80704e-15
NZ_CP008796.1\|WP_038060504.1\|1457488_1458448_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	5.79508e-59
NZ_CP008796.1\|WP_038060519.1\|1474003_1475215_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	3.9798e-165
NZ_CP008796.1\|WP_038060508.1\|1459580_1459874_+\|DUF4143-domain-containing-protein	gnl\|CDD\|379306	pfam13635, DUF4143, Domain of unknown function (DUF4143). This domain is almost always found C-terminal to an ATPase core family.	1.46727e-10
NZ_CP008796.1\|WP_038060516.1\|1470452_1473023_+\|ATP-binding-protein	gnl\|CDD\|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	5.91502e-36
NZ_CP008796.1\|WP_038060511.1\|1463243_1466549_+\|DUF3883-domain-containing-protein	gnl\|CDD\|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.35367e-68
NZ_CP008796.1\|WP_038060498.1\|1453642_1455352_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.34048e-63
NZ_CP008796.1\|WP_081856538.1\|1466551_1468075_+\|DUF1156-domain-containing-protein	gnl\|CDD\|224657	COG1743, COG1743, Adenine-specific DNA methylase containing a Zn-ribbon [DNA replication, recombination, and repair].	4.2253e-88
NZ_CP008796.1\|WP_051754585.1\|1476257_1477424_-\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.26505e-57
NZ_CP008796.1\|WP_144241984.1\|1468071_1468563_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	4.15783e-13
NZ_CP008796.1\|WP_038060506.1\|1458459_1459257_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|274218	TIGR02593, CRISPR-associated_protein_Cas5, CRISPR-associated protein Cas5, N-terminal domain. This model represents a shared N-terminal domain, about 43 amino acids in length, common to a number of related protein families each of which is associated with a distinct subtype of CRISPR/cas system, where CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeat and Cas is an abbreviation for CRISPR-associated. Members of this family are widely distributed enough that we designated the family Cas5. Homology appears remote, or absent, between the more C-terminal regions different subfamilies of these proteins, which typically are 210 to 265 amino acids in total length. Cas5 proteins of six different CRISPR/cas subtypes so far defined are described by respective full-length models TIGR01868, TIGR01876, TIGR01895, TIGR01874, TIGR02586, and TIGR02592. The best characterized protein in this family is DevS or Myxococcus xanthus, a Cas protein that appears to participate in a species-specific developmental pathway.	2.1221e-09
NZ_CP008796.1\|WP_038060583.1\|1475175_1476246_-\|heme-b-synthase	gnl\|CDD\|275338	TIGR04545, rSAM_ahbD_hemeb, heme b synthase. Members of this family are AhbD (alternative heme biosynthetic protein D), a radical SAM enzyme in sulfate-reducing bacteria and methanogens that performs the last decarboxylations to synthesize heme b from Fe-coproporphyrin III. Members include DVU_0855, previously included in error in TIGR04055, the NirJ2 family thought to be involved in heme d1 biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	0

>NZ_CP008796.1|WP_028841911.1|1461363_1461627_+|CRISPR-associated-endonuclease-Cas2
MYVILVYDINEKRVQKVLKICRKFLHWVQNSVFEGEITEAKLFKLKQQLNHVIDPEEDSVVIYTFLTEKYSRREILGKNKAVTDVII
>NZ_CP008796.1|WP_038060509.1|1460367_1461360_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKTVYIFTDGELKRKDNTICLETSNGKKYLPVENVAEILVFGEVTVNKRFLEFLTQSEIILHFFNRYGYYVGSFYPREHLNSGYMILKQAEFYLDRDKRFVLAKKFVWGAIENIKKVLTYYQNRGKNLEEIIDKVNSISDGLVRCRNVDELMAIEGNVREQYYHAFDRILNKEHFVFEARSKRPPKNRLNALISFGNSLLYTVCLSEIYRTHLDPRIGFLHTTNFRRFSLNLDVAEIFKPIIVDRVIFNLVNKSIIKSQHFESKLDGIVLNEKGKQVFIKEFDEKLKTTLYHKRLKRKISYRSLIRLELYKIEKHLMGDEEYKPFISEW
>NZ_CP008796.1|WP_038042052.1|1459876_1460371_+|CRISPR-associated-protein-Cas4
MVSVTGTLIWYYYICPREVWLMSRHLNPSQDDPFIEIGRLISKEAYQRERKEVRVENIVIDLLKSSEGEVVVGEVKKSSKYEKSAKMQICYYLMRLKALGILAKGVLLFPKEKKRIEVDLTPEIEEELKNTIADIKAISEKETPPPAKKIKFCAKCGYKEFCWA
>NZ_CP008796.1|WP_038060508.1|1459580_1459874_+|DUF4143-domain-containing-protein
MLKEKARQNFAKIYFWRTKDKSEVDFVVERGNEVIPVEVKYKRLTKPEITRGMRSFIERYKPKKAFIVNLELESTFCLNSTKLYVVPYYKLLTDCFL
>NZ_CP008796.1|WP_156095573.1|1459358_1459529_+|hypothetical-protein
MIKRKLLEEIKGHLNKREITFIVGPRQAGKTTLMLMFKEFLEFFYFSEQADKEDRA
>NZ_CP008796.1|WP_038060506.1|1458459_1459257_+|CRISPR-associated-protein-Cas5
MKAIAFKVRLNSLYSIRIPFTWQSALTYPVLPPSAVIGMFANALQRYKNDRNPLDYLNLVEENIIWAGSRLLTPCLIKSYTTSAITKWEDHIGAKFTNALGRQFAFTKTLEIAGIFKDDTLINELVEALITSPLTCGDSESAISLENKPEDMIKEVEKVDDLESIVTNYPFPFTNDIEISEGKGLLYLMHERCKPSEKNFPLTLYLVPIEEKERILFPTSVTIQIVKKNSESPKEVFKIQDIGYVLKSQFKNRRTKAKIKKRKKN
>NZ_CP008796.1|WP_038060504.1|1457488_1458448_+|DevR-family-CRISPR-associated-autoregulator
MLKFVTLAVKVQLNVHDLNNETVAGNVTDIRVMEFLDENGTRREAPAVSGRMLKHWHYEGMRHLILNGLYTSVPLCAGCKVGEPIRPAEIKNGNLKQIAKPEEDAILSCVICDVHGYLIAREAEGESDRGISARRTSRAMFSWLMPVLGPETTSTQVIHTRVSQIRERGEGEQAAQMIFNKSYASGIYAFVSALDVDRIGLVELNLGSSNPYVINNNDRKNRIKVALEAYRYLISGQMGASLSHAIPHMNPIEVFVAYSEVGPLPFPVSPMYSDYLSKTVGLFPQHAKFLYWGQKTPEGVIKKEKISEIFDELLGKVEE
>NZ_CP008796.1|WP_038060502.1|1456113_1457487_+|type-I-A-CRISPR-associated-protein-Csa5
MINLYTPATGFPDLEVKIAYGLARVGIEAFGINRVKIIPEKGFYLVLIDGNIPKLNDTFHKISARVLSSDFIPRSTPGITGRTADTIKVSKNETFDLSIYTHIIEIAEHKKSENFCRHKEKIKVSNVIGFTAAATTGVLCKRDGLDITYYQGVPRRPTDPREICKTCALLALLGMWYASFIFNIADKEVIITPIPNNEVSGLKLQEIFSIQHQIRKEWFGQEIPQVLIPLFFLSRIPSSADILEGFDLFVAVLSRQQGYHVDGIYLLSIEKYLNFLRDNPFNIASIDVMLRNNAFSALTELNNVIYYKKDSITKFARLYVQETSSDKFVNLLYPQTAKYLLREVGMIRQDIIENPALASLARTLRYFIRERKYGYADDIRNARKDSRDFEETIARMLREGRLRLEQKEKIHLPTEDEIKEVFRLANENFEATKTALVILAFSFPSKVEQTAENIEEV
>NZ_CP008796.1|WP_038060500.1|1455332_1456091_+|CRISPR-associated-endonuclease-Cas3''
MVVLLFSAPEEEYLKHIKRCEEKFEILFSIFSHTVRRILNSSFSEDELRQYFLKMIRFHDLGKLTKKWQENIGKDKNKKLPSHAPIGAAYLWKVLPKGIKESLAFAVAIHHTDRGLLGDNIERPDVQAILDGIVKNDGSIDWHKGVDDLDKEYFPDGARELTINDLREMARGLRVWARGCDLFEQHRRRLQVALAHHILKLCDISAAVERKEYQKGDENKEVYFGGWLMSSNIKSYVENVYNRMQQLKRLKT
>NZ_CP008796.1|WP_038060498.1|1453642_1455352_+|CRISPR-associated-helicase-Cas3'
MQNISLNVRDFYKKYFQIDEPYEFQERIWDLILQGKNPLLVRAPTGSGKTEAVIAPFLAQFINNDFIIAPRLIYVLPMRVLVNGIAQRIKKYAERISPNISVEIQHGDIPDSPFFIADIIVTTLDQFLYGFARASRQVGYHIDVPAGSIASSLVVFDEAHMYRDGFTFSIMRALMEILYRSNIPFVVMTATMPKTLEESLFERIEMDEEQKIFADLPSSSKIKITLIDKPLFSKEDINLSDELLEKIKKKKTLIVANQVKRAQKIYEKIKLRLDLRDEEIVLLHSRFTKADRAFHETKALSLIPHKEDGKIVVPEGAGIVVSTQVLEAGIDFSAELLLTELAPADSLVQRSGRCARYNGQKGEMYIFPVEEENKGYLPYEKKCLEKTWEWLKNNPDFDIKDFNQVCNFVDFTLDYKANDYEAADTLIDLYECVLYADTEPRNIQLRKSKPVTIVILDIPDRSGEKIRKEVEAKYLEHLRNTTIKDVSFEIDTNIAWAWFKDRLIKYEIKWRYNENTKRNEFEVIDLFKMRTSREPEEEDPRINPFGIYVIPKAYYDPTLGVEKDGSPFI
>NZ_CP008796.1|WP_038060511.1|1463243_1466549_+|DUF3883-domain-containing-protein
MLTEGSIIEGDFWPEPVEVKRVEEVEDGYRIVGSTIISRQHVDDFIAFSDLPKIKTKEFLLSFTQPGSEAFLALEALRFRYASLFDPLLAVNVSKVEPLPFQIEAVYGYILKLPHIRFLLADDPGAGKTIMAGLVIKELKLRGLARRILIVVPGHLKDQWLRELQERFKETFVVFDRYTLNASYGDNFLLRNNQVITSMDFAKQEEILPLFASSHWDLTIVDEAHKMAAYRYGEKVEKTQRYKLGETLSKTSTHLLFLTATPHKGDPENFRLLLDLLKPGFFATSEMVEASLRDQDNPLFIRRLKEDLRDFEGKPLFTNRYPKTIKFTLSDEERELYQELSQYVVEQYNKALTLDKKRNIGFALLILQRRMASSTYALLKSLERRKNRLEDLLKSPELDKKLTNLEDFEEVEDYQEKERWKIEEKWETISLARNKEELRREIWTIERLIEKAKEILAEEKEVKLSELKKAIEEGFRKLKEVGGNEKILIFTESKDTLEYLVNKIKSWGYSINYIHGGMDLRERVEAERVFRDKTQIMVATEAAGEGINLQFCNLMINYDIPWNPNRLEQRIGRIHRYGQQKDVFIFNLVAIDTIEGRILSKLFDKLEEIKEKLGSDRVFDIIGEVFLGKNLYQLIVEAVVQAKTLDEIIKEIDIEVDEEYIRKVKSALGESLATKFIDYTRIKELFEKAKENRLIPEYVEEFFKKAFTKAGGSYHIRKDGFISLEALPFELKNIAQKQNITLAKYPKATFDKDKAFKNPDAEFISFGHPLLETLIDWVHQTFLNNLQKGAMFEDPDGKYNGIIWFFEGEVKDGKGETAGKRIFAIYDDMEKNFTEINPAVIWDLIPIDNPTEVPNLENLNSRKENTKNFARQLIMKYKKEIEEERTRQAEIKEKYGIKSLEYLIDKLDEELVVLYEREDKGKEVRLAIQNKEERKKYYQKALDELKEEIKREKTLTITWPQFKGAILVKPKKTDQMVSDEEIERIGMEIAMEYERSQGREPEDVSKENLGFDIRSRGKDEIRYIEVKARKDEGDVALTVNEWLKAKRFKENYWLYIVCNAITNPTLYIINNPAENLKVQDKVEVVRFIVPLEEWKKKGERA
>NZ_CP008796.1|WP_081856538.1|1466551_1468075_+|DUF1156-domain-containing-protein
MKEQKSFIEVTFPIKEVSEESAREKNIRHGHISTLHIWWARRPLASSRATTYAALIPYPSTEKEAKEKAKFIVELSKWENSLKEDLIQKAREDILKTNGGKPLRVLDPFSGGGSIPLECLRLGLETHAVEYNPVAVLILKCTLEYPQRYGRQNKVKKDEGLFNFEKEESPLIADVRKWGEWVLEKAREEIGKFYPADEDGSVPAGYIWARTIPCQNPSCGAETPLMRQFWLARKENKMISLYPFVHEGRVEFAIVKKNGDEWQVVESSIPGFSPKVPFNFEPEKGTVSRAIAVCPVCGGMVDDKQVRRLFQEGKAGQRMVAVVLSRPQGKAYRLATKRDVEFYRKAEEYLEEKREKLWEEWGIDPVPDEEIDPNSLKPRTMWLYGMSRWGDLFNSRQKLALITFTEKVRLVYNKMIEEGYDKDYAKAVVSYLGLGVNRLAIYATTFGYWHNTRELVNPGMGRQALAMTWDYSEVNPFGGNADWESAISWIIYVLSHLTQIPPVETEE
>NZ_CP008796.1|WP_144241984.1|1468071_1468563_+|nucleotidyltransferase-domain-containing-protein
MMDKETAKKVLEIMLTADGGCEYCVRNLYLQFIKEFPQYSYLARKLYRKTFNQELVTEDMAEDIIKEVINETLKAYNLEGEKIILFGSRARGTQRKDSDWDILVVVKQPVAKETKQKLFKEITERLSYYLIPCDVIIKSVKDLEFYKNFYGTVTYEALKEGHS
>NZ_CP008796.1|WP_038060513.1|1468574_1468871_+|nucleotidyltransferase-family-protein
MKTIEEIKRILAEHKSEIREKYGVVIVGIFGSYARGEQKETSDIDIIVELDRPVGLDFYEFWDYIENLFGTKVDVLTLSALKQKPLLWEKVKDNIVYV
>NZ_CP008796.1|WP_038060515.1|1468863_1469217_+|DUF86-domain-containing-protein
MSKPNRDWKLLILDILESINKIERYTEGMDYELFEKAEQTKDAVVRNLEIIGEASSKIPKDIQQKYNHIPWGKIIAMRNRMIHGYFTIDYRIVWKIIKEDLPELKEQLEQTLKKEKG
>NZ_CP008796.1|WP_038060516.1|1470452_1473023_+|ATP-binding-protein
MRPFTTVAVPHDDILKEKLTMDVFAADLWQVYKGSAPAEYQDPREFFRKTFLTKGMSYLIDVVRKRLEGRGGDSVIQLQTPFGGGKTHSLIALYHKAKTEFNAKVVVLSGTAFDPRDTFLWEEIERQLTGKVDILKGNISPGKEKLRKVLENHQPLLILMDEILAYTIKADGVKVGNTTLGDQTLCFIQELTETLSTLSNAVLVFTLPSSLLEHFDEKGEKRFQQLQKFVGRMEKVLTPIEDEEVAHVIRKRLFKYVDESLAEEIIQEFTDYAEREGFLKMDKVLYKQRFKASYPFQPEVIDVLYKRWGSFPTFQRTRGVLRLLALVVKSLKDSNLPFISLGDIDLSNEEIRRELIKHIGSEYDSVIAADITSSNSGAKKVDASLGLSYLSFRLGTKIATTIFMYSFSGGPEKGATLSEIKLSCARPEFQSSIIVEALEKLRNTLFYLSDSESIYLFTNKPNLNRILLIKMDGISEARLIEEEEHLLKQVFKKSEHFDIYICPKHTRDIPDSEKLKLIIMESNNPTMIKEFIETYGERPRVYRNTMIFLCPLEGEKSKILDMLRKKLAWEEIEKDKNLELTPDQKERVKENIKTLNEGIKERIKSVYRIVFLPNKDEPERIDLGAPTYIGKKEYTDEIYTRLKEEGKILEKISPRLLKEKYLKIKDYVQTKNILDSFYKIPGELRIKNKEVLARAIKEGIRLGEFGLGYLEDGKIECKYYKTDGEPYFEETEVLIKKELCEVEKNEYKPEPIYDQPETPGKGAEKVKEPSSSHIVIIEPSTTLLKYRQLSLKLSISSGKLSDVVKTINFIKQKFSNVEIKIEISAKNGEILKTEYEDKIKEAINQLGLEIEDEKIE
>NZ_CP008796.1|WP_038060518.1|1473537_1473978_+|hypothetical-protein
MKKMVRLLMVFTVLCLMVNLKDLSAQEVIDVTKEVNVTGNNPDLVYYPVPFIPVLKDLSYQGEQSALLKTDKIITGMLVFKGNYKANSLLEFYRVQMKNNGWEEVGSFTSKITFVAYKRPEGHAFISVSEGYFSTELRIVIIFNKN
>NZ_CP008796.1|WP_038060519.1|1474003_1475215_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MVANGLKGRNILVGLTGGIAVYKVCELIRKLKNSGANVKVILSKGAEKFVTPLLFASLSGEKAYTDEDFFKPTGEILHIDLAKFPDVVIIAPATASFMAKLASGQADELLLSTLLATKTPVYIFPSMNTNMWEHPATQRNVETLKSWGYRVYEPASGALACNTTGKGRLPEVEEIFETLQAHFVKKDMLGQKVLITGGPTREYIDEVRFITNDSSGKMAFLLAKEAYYRGAEVYLIWGGKELPGIFPRINDFLGIPYPKVFSVSTTKEMLEVAKTLFPKCNLAIFAAAPCDFRPKQAFSGKIKKQEILTLDLELTEDIAKTLSSQKQPDQITIGFALETPENLEKYALLKKKEKNFDFIVANPISTLSAESSDFIVFTPKDKLEFKEVSKAYLAKVLFDLIGV
>NZ_CP008796.1|WP_038060583.1|1475175_1476246_-|heme-b-synthase
MEKTFKPRLIAWELTRSCNLDCVHCRAAASKGPYANELTTEEIFRILEEIKEVAEPIIILTGGEPLLRKDLFQIAKRCIDLGFKPVLATNGTLITKEVAQQIKETGISRVSISLDGSTPESHDNFRKVPGAFEGALKGIENLKKVGVPFQINTTITPQNLEELPKVHELAKSLGAVAHHIFLLVPVGRGKELSTGGINAEKYEEILGWFYEQRDKCNLQLKATCAPTYYRILRQRAKKEGKDVTVENFGLDAMTRGCLAGTGFCFISHVGIVQTCGYLEVPCGNLREQTFKEVWENSEVFNNLRDFSKYKGKCGRCEYIRVCGGCRARAYEATGDYLEEEPLCPYTPIKSNKTLAK
>NZ_CP008796.1|WP_051754585.1|1476257_1477424_-|metallophosphoesterase
MFWFLLIFFTVFSLIYLYLYLTKIRPLVKRRNLRKFIVTVFILLVFSPVFIRYTDQHLPPLFSKWLAFLVLIWIGFVLYLCVFCVVFDLIKLVFRWKTLTSKKILLGAVFLAVGFSVYSYYETLGLEVIRLQIRTDKLPPQVSRVKIMQISDLHLGPVLGQEKIELVKKVWEKEKPDLIVNTGDLVDGNMRKKDHLAEELAKITAPLGKYAVMGNHEYYRGWKQALEFIEKSGFKVLKDETEVIAGFLVLVGLDDRDCRYYKACSPGFDENTFLCKIPRDKFVLVLKHQPVVQKETIGCFNLMLSGHTHGGLYKGIGSFLVRLLYETDRGLKYLGKGSYLFVSKGVGTGGPPMRFLTPPDVVIIELINIKNEKQPEGRAVLLRERYKM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008796_2	2.17\|1462891\|37\|NZ_CP008796\|PILER-CR,CRISPRCasFinder,CRT	1462891-1462927	37	KP282676	Hydrogenobaculum phage 1 strain HP1, complete genome	16543-16579	4	0.892
NZ_CP008796_2	2.20\|1463090\|36\|NZ_CP008796\|PILER-CR,CRISPRCasFinder,CRT	1463090-1463125	36	AP018319	Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome	290970-291005	8	0.778
NZ_CP008796_2	2.20\|1463090\|36\|NZ_CP008796\|PILER-CR,CRISPRCasFinder,CRT	1463090-1463125	36	MH552560	Microviridae sp. isolate ctcf390, complete genome	3706-3741	8	0.778

1. spacer 2.17|1462891|37|NZ_CP008796|PILER-CR,CRISPRCasFinder,CRT matches to KP282676 (Hydrogenobaculum phage 1 strain HP1, complete genome) position: , mismatch: 4, identity: 0.892

ccctcaggtaatcttgtcctgagaacaaagtgtatgg	CRISPR spacer
ccctcaggtaatcttgtcctgagaacaaagtgcaacc	Protospacer
********************************.*

2. spacer 2.20|1463090|36|NZ_CP008796|PILER-CR,CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.778

atgagtctc----ttgacattttctaaaaatatgttaaaa	CRISPR spacer
----ctctcaaggttgatattatctaaaaatatgttaaag	Protospacer
     ****    ****.*** *****************.

3. spacer 2.20|1463090|36|NZ_CP008796|PILER-CR,CRISPRCasFinder,CRT matches to MH552560 (Microviridae sp. isolate ctcf390, complete genome) position: , mismatch: 8, identity: 0.778

atgagtctcttgacattttctaaaaatatgttaaaa	CRISPR spacer
agcatttttttgtcattttctaaaaatattttaaag	Protospacer
*  * *.*.*** **************** *****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1015482 : 1023080

Staphylococcus_phage(33.33%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051754513.1\|1015482_1016337_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-11	24.3
WP_038549648.1\|1016454_1017660_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_051754514.1\|1017666_1018506_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.3e-24	29.7
WP_038549650.1\|1018800_1021221_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	9.2e-191	48.6
WP_038062578.1\|1021229_1022483_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.1e-134	58.0
WP_038062577.1\|1022489_1023080_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.3e-53	54.7

DBSCAN-SWA_2

1045636 : 1055353

Bacillus_virus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038062810.1\|1045636_1046932_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.7e-88	42.5
WP_038062814.1\|1046933_1048313_-	hypothetical protein	NA	NA	NA	NA
WP_038062817.1\|1048382_1049453_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_038062820.1\|1049463_1050576_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	1.7e-14	23.5
WP_051754520.1\|1050585_1051488_+	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	1.5e-21	43.0
WP_038062823.1\|1051542_1052781_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.6e-96	51.0
WP_022855380.1\|1052787_1053339_+	cell division protein DedD	A0A1J0GVF3	Mycobacterium_phage	3.5e-21	45.8
WP_038062825.1\|1053443_1054361_+	J domain-containing protein	A0A0N9QPY2	Chrysochromulina_ericina_virus	1.7e-20	28.1
WP_038062828.1\|1054444_1055353_+	spermine synthase	A0A1C9C533	Heterosigma_akashiwo_virus	1.7e-20	29.7

DBSCAN-SWA_3

1241153 : 1249917

Bordetella_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038062446.1\|1241153_1241609_-	single-stranded DNA-binding protein	A0A291LA01	Bordetella_phage	1.7e-26	54.5
WP_038549552.1\|1241944_1243150_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_081856536.1\|1243833_1246428_-	calcium-translocating P-type ATPase, PMCA-type	M1HX51	Paramecium_bursaria_Chlorella_virus	1.2e-92	32.1
WP_038062672.1\|1246548_1247607_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	4.2e-108	61.7
WP_051754547.1\|1247621_1248626_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	E3SL45	Synechococcus_phage	3.7e-13	28.2
WP_038062675.1\|1248636_1249917_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	1.5e-131	54.9

DBSCAN-SWA_4

1264794 : 1338204

Staphylococcus_phage(15.38%)

capsid,transposase,plate,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038549575.1\|1264794_1266000_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_038549729.1\|1266006_1266189_-	diguanylate cyclase	NA	NA	NA	NA
WP_038549575.1\|1266266_1267472_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_051754552.1\|1267401_1268934_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.7e-12	34.7
WP_028841519.1\|1269032_1270052_-	hypothetical protein	NA	NA	NA	NA
WP_028841520.1\|1270055_1271366_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_038061471.1\|1271458_1272022_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_028841522.1\|1272067_1272469_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_081856496.1\|1272498_1273608_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_038061477.1\|1273687_1275637_+	hypothetical protein	NA	NA	NA	NA
WP_038061480.1\|1275668_1276970_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_038061483.1\|1276972_1278175_+	alpha-amylase	NA	NA	NA	NA
WP_051754553.1\|1278177_1280742_+	alpha-glucan family phosphorylase	NA	NA	NA	NA
WP_038061486.1\|1280788_1281409_+	hypothetical protein	NA	NA	NA	NA
WP_051754554.1\|1281449_1281770_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_038061489.1\|1281779_1282583_-	NAD(+)/NADH kinase	NA	NA	NA	NA
WP_051754555.1\|1282902_1283352_+	adenosylmethionine decarboxylase	E3SIG3	Synechococcus_phage	3.7e-05	38.2
WP_038061492.1\|1283348_1284170_+	spermine synthase	NA	NA	NA	NA
WP_051754556.1\|1284183_1284768_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_038061495.1\|1284739_1285459_-	hypothetical protein	NA	NA	NA	NA
WP_038061498.1\|1285470_1286310_-	fumarate hydratase	NA	NA	NA	NA
WP_038061501.1\|1286302_1287250_-	glycoside hydrolase family 3 protein	NA	NA	NA	NA
WP_038061504.1\|1287251_1288379_-	cysteine desulfurase	NA	NA	NA	NA
WP_038061507.1\|1288484_1291985_+	reverse gyrase	A0A076FM50	Aureococcus_anophage	6.9e-38	30.4
WP_081856497.1\|1292069_1292972_+	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA
WP_038061510.1\|1292992_1293706_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	2.1e-18	38.2
WP_051754557.1\|1293691_1295572_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_038061516.1\|1301663_1302305_-	hypothetical protein	NA	NA	NA	NA
WP_038061519.1\|1302837_1303221_-	DUF3862 domain-containing protein	NA	NA	NA	NA
WP_038061521.1\|1303295_1303991_-	helix-turn-helix transcriptional regulator	A0A0D4DBI5	Acinetobacter_phage	1.5e-08	28.6
WP_038061523.1\|1304036_1304267_+	transcriptional regulator	A0A0C5AJQ3	Paenibacillus_phage	9.4e-05	36.2
WP_038061528.1\|1304269_1304521_+	hypothetical protein	NA	NA	NA	NA
WP_144241977.1\|1304738_1305038_+	hypothetical protein	NA	NA	NA	NA
WP_038061533.1\|1305021_1305522_+	hypothetical protein	NA	NA	NA	NA
WP_144241978.1\|1305536_1305758_+	hypothetical protein	NA	NA	NA	NA
WP_038061539.1\|1305767_1306442_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_038061542.1\|1306465_1306702_+	hypothetical protein	NA	NA	NA	NA
WP_038061544.1\|1306701_1308645_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038061545.1\|1308663_1309548_+	ATP-binding protein	NA	NA	NA	NA
WP_051754558.1\|1309574_1310027_+	hypothetical protein	NA	NA	NA	NA
WP_038549552.1\|1309956_1311162_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_001259312.1\|1311348_1311840_+	hypothetical protein	NA	NA	NA	NA
WP_000963365.1\|1311826_1312246_+	hypothetical protein	NA	NA	NA	NA
WP_000737858.1\|1312229_1312457_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038061552.1\|1312528_1313050_+	hypothetical protein	NA	NA	NA	NA
WP_038061555.1\|1313046_1313253_+	hypothetical protein	R9U1D8	Rhizobium_phage	1.3e-05	36.6
WP_038061557.1\|1313237_1314257_+	hypothetical protein	A0A067ZG47	Vibrio_phage	1.1e-20	28.2
WP_051754559.1\|1314253_1314661_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-16	41.5
WP_038061560.1\|1315032_1315299_+	hypothetical protein	NA	NA	NA	NA
WP_038061563.1\|1315295_1315592_+	hypothetical protein	A0A0N7ACI6	Bacillus_phage	1.4e-05	41.0
WP_038061567.1\|1315594_1316086_+	DUF3486 family protein	NA	NA	NA	NA
WP_158506233.1\|1316096_1317389_+	hypothetical protein	A0A2P9JZI8	Alteromonadaceae_phage	1.8e-68	38.6
WP_144241979.1\|1317366_1318770_+\|portal	phage portal protein	NA	NA	NA	NA
WP_051754561.1\|1318895_1319483_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_144241980.1\|1319469_1319871_+	hypothetical protein	NA	NA	NA	NA
WP_038061574.1\|1320063_1321371_+	hypothetical protein	NA	NA	NA	NA
WP_051754562.1\|1321348_1321699_+	hypothetical protein	NA	NA	NA	NA
WP_051754563.1\|1322004_1322316_+	hypothetical protein	Q6QIA0	Burkholderia_phage	2.5e-08	38.5
WP_038061576.1\|1322312_1323410_+\|plate	baseplate J/gp47 family protein	A0A0C5AEG2	Bacteriophage	2.1e-73	41.0
WP_156095581.1\|1323464_1324160_+	hypothetical protein	NA	NA	NA	NA
WP_038061577.1\|1324152_1324575_+	hypothetical protein	NA	NA	NA	NA
WP_038061578.1\|1324574_1324838_+	hypothetical protein	NA	NA	NA	NA
WP_038061580.1\|1324837_1325737_+\|capsid	N4-gp56 family major capsid protein	A0A0A0RSW8	Bacillus_phage	1.9e-32	32.4
WP_038061582.1\|1325750_1325930_+	hypothetical protein	NA	NA	NA	NA
WP_038061584.1\|1325933_1326263_+	hypothetical protein	NA	NA	NA	NA
WP_144241982.1\|1326289_1326469_+	hypothetical protein	NA	NA	NA	NA
WP_051754564.1\|1326459_1326879_+	hypothetical protein	G9BWH2	Planktothrix_phage	4.5e-05	29.6
WP_038061588.1\|1326879_1327359_+	hypothetical protein	NA	NA	NA	NA
WP_038061590.1\|1327362_1327557_+	hypothetical protein	NA	NA	NA	NA
WP_038061592.1\|1327546_1328812_+	hypothetical protein	R9U4C2	Rhizobium_phage	1.1e-81	43.6
WP_038061593.1\|1328816_1329335_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.2e-28	37.6
WP_038061595.1\|1329339_1329606_+	hypothetical protein	NA	NA	NA	NA
WP_038549552.1\|1329706_1330912_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-11	24.3
WP_038062180.1\|1331068_1333486_+\|tail	phage tail tape measure protein	M1FQW0	Enterobacteria_phage	2.1e-46	28.7
WP_051754565.1\|1333535_1334234_+\|tail	phage tail protein I	A0A2K9V471	Faecalibacterium_phage	1.2e-18	37.0
WP_051754566.1\|1334244_1335600_+	hypothetical protein	A0A0C5AEQ0	Bacteriophage	7.8e-30	45.3
WP_038062177.1\|1335599_1336046_+	hypothetical protein	NA	NA	NA	NA
WP_081856499.1\|1336105_1336579_+	single-stranded DNA-binding protein	R9TPS8	Aeromonas_phage	1.9e-20	52.6
WP_081856500.1\|1336992_1338204_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.9e-13	45.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008796

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection