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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007490 Rhodoluna lacicola strain MWH-Ta8 chromosome, complete genome 2 crisprs DEDDh,WYL,cas3 0 1 4 0

Results visualization

1. NZ_CP007490
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007490_1 1106477-1106581 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007490_2 1140755-1140835 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 NZ_CP012100 Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence 508688-508716 6 0.793
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 NZ_CP030933 Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence 753600-753628 7 0.759
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 NZ_AP014822 Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence 40473-40501 7 0.759
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 NZ_AP014825 Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence 46563-46591 7 0.759
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 MT774400 CrAssphage cr4_1, complete genome 57649-57677 7 0.759
NZ_CP007490_1 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder 1106515-1106543 29 MN693524 Marine virus AFVG_25M219, complete genome 25922-25950 7 0.759

1. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to NZ_CP012100 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-1, complete sequence) position: , mismatch: 6, identity: 0.793

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
agttcagcatcttgttcttttgctaattc	Protospacer
  .*****.**** ************** 

2. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 7, identity: 0.759

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
aaatcagcgtcattttctttggctaagta	Protospacer
   ******** ******** ***** *.

3. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to NZ_AP014822 (Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence) position: , mismatch: 7, identity: 0.759

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
gattttgcgacttcttcttttgctaattg	Protospacer
  .*. *** ***.***************

4. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to NZ_AP014825 (Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence) position: , mismatch: 7, identity: 0.759

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
gattttgcgacttcttcttttgctaattg	Protospacer
  .*. *** ***.***************

5. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to MT774400 (CrAssphage cr4_1, complete genome) position: , mismatch: 7, identity: 0.759

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
agccttgcttctttttgttttgctaattg	Protospacer
  *.. ** ******* ************

6. spacer 1.1|1106515|29|NZ_CP007490|CRISPRCasFinder matches to MN693524 (Marine virus AFVG_25M219, complete genome) position: , mismatch: 7, identity: 0.759

ctctcagcgtctttttcttttgctaattg	CRISPR spacer
ttctcagcgtatttttctttttctgtatc	Protospacer
.********* ********** **.  * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 157026 : 163979 7 Mycobacterium_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_2 569216 : 576294 8 Acanthocystis_turfacea_Chlorella_virus(16.67%) NA NA
DBSCAN-SWA_3 1053019 : 1063011 11 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_4 1165615 : 1174231 9 Staphylococcus_phage(57.14%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage