CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007518	Aeromonas hydrophila YL17 chromosome, complete genome	8 crisprs	cas3,WYL,csa3,DEDDh,DinG	0	3	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007518_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_1

149159-149275

Orphan

Consensus_repeat	Method
GCAGCTTGGACAACTCAGTAGCTGCATACCAGTTTCCAGCTGC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP007518_1

>merge|NZ_CP007518|1|149159-149275|CRISPRCasFinder
GCAGCTTGGACAACTCAGTAGCTGCATACCAGTTTCCAGCTGCTATCGCCCGCTCTGAGCTCGCTGCTGGTGCGGCAGCTTGGACAACTCAGTAGCTGCATACCAGTTTCCAGCTGC

>NZ_CP007518|1|1|149159-149275|CRISPRCasFinder
GCAGCTTGGACAACTCAGTAGCTGCATACCAGTTTCCAGCTGC	TATCGCCCGCTCTGAGCTCGCTGCTGGTGCG
GCAGCTTGGACAACTCAGTAGCTGCATACCAGTTTCCAGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_010633011.1\|157776_159879_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP007518.2\|WP_005297834.1\|145931_146459_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP007518.2\|WP_005297820.1\|160918_161128_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP007518.2\|WP_010633010.1\|162438_162984_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_CP007518.2\|WP_005297833.1\|146526_146934_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP007518.2\|WP_005297845.1\|141120_143676_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP007518.2\|WP_010633023.1\|139357_140383_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226642
NZ_CP007518.2\|WP_010633012.1\|156099_157515_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP007518.2\|WP_017763975.1\|163030_164110_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_CP007518.2\|WP_010633016.1\|147597_148833_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP007518.2\|WP_010633024.1\|138311_139355_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226690
NZ_CP007518.2\|WP_005297832.1\|146950_147586_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP007518.2\|WP_025201222.1\|165005_165269_+\|DUF2132-domain-containing-protein	unknown	unknown	gnl\|CDD\|378300
NZ_CP007518.2\|WP_010633008.1\|164136_165009_+\|phosphatidylserine-decarboxylase	unknown	unknown	gnl\|CDD\|234591
NZ_CP007518.2\|WP_025201225.1\|136411_138229_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP007518.2\|WP_005297812.1\|165373_165625_+\|DUF2960-domain-containing-protein	unknown	unknown	gnl\|CDD\|371406
NZ_CP007518.2\|WP_005297842.1\|143786_144551_+\|DUF3450-domain-containing-protein	unknown	unknown	gnl\|CDD\|378764
NZ_CP007518.2\|WP_025201223.1\|152779_154924_+\|ExeM/NucH-family-extracellular-endonuclease	unknown	unknown	gnl\|CDD\|225249
NZ_CP007518.2\|WP_017784161.1\|144547_145921_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP007518.2\|WP_005297821.1\|159977_160646_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|282128

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_010633011.1\|157776_159879_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.33426e-71
NZ_CP007518.2\|WP_005297834.1\|145931_146459_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	3.25405e-19
NZ_CP007518.2\|WP_005297820.1\|160918_161128_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	5.8355e-30
NZ_CP007518.2\|WP_010633010.1\|162438_162984_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	1.50031e-129
NZ_CP007518.2\|WP_005297833.1\|146526_146934_+\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	2.75514e-30
NZ_CP007518.2\|WP_005297845.1\|141120_143676_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.27562e-54
NZ_CP007518.2\|WP_010633023.1\|139357_140383_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226642	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only].	3.19077e-105
NZ_CP007518.2\|WP_010633012.1\|156099_157515_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP007518.2\|WP_017763975.1\|163030_164110_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_CP007518.2\|WP_010633016.1\|147597_148833_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.46715e-06
NZ_CP007518.2\|WP_010633024.1\|138311_139355_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.9664e-108
NZ_CP007518.2\|WP_005297832.1\|146950_147586_+\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.53346e-16
NZ_CP007518.2\|WP_025201222.1\|165005_165269_+\|DUF2132-domain-containing-protein	gnl\|CDD\|378300	pfam09905, VF530, DNA-binding protein VF530. VF530 contains a unique four-helix motif that shows some similarity to the C-terminal double-stranded DNA (dsDNA) binding domain of RecA, as well as other nucleic acid binding domains.	1.11249e-47
NZ_CP007518.2\|WP_010633008.1\|164136_165009_+\|phosphatidylserine-decarboxylase	gnl\|CDD\|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	0
NZ_CP007518.2\|WP_025201225.1\|136411_138229_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.14409e-172
NZ_CP007518.2\|WP_005297812.1\|165373_165625_+\|DUF2960-domain-containing-protein	gnl\|CDD\|371406	pfam11173, DUF2960, Protein of unknown function (DUF2960). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	2.63306e-36
NZ_CP007518.2\|WP_005297842.1\|143786_144551_+\|DUF3450-domain-containing-protein	gnl\|CDD\|378764	pfam11932, DUF3450, Protein of unknown function (DUF3450). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are about 260 amino acids in length.	1.20041e-93
NZ_CP007518.2\|WP_025201223.1\|152779_154924_+\|ExeM/NucH-family-extracellular-endonuclease	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	1.57234e-114
NZ_CP007518.2\|WP_017784161.1\|144547_145921_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	1.06105e-31
NZ_CP007518.2\|WP_005297821.1\|159977_160646_+\|hypothetical-protein	gnl\|CDD\|282128	pfam04225, OapA, Opacity-associated protein A LysM-like domain. This family includes the Haemophilus influenzae opacity-associated protein. This protein is required for efficient nasopharyngeal mucosal colonisation, and its expression is associated with a distinctive transparent colony phenotype. OapA is thought to be a secreted protein, and its expression exhibits high-frequency phase variation. This is a LysM-like domain.	2.74886e-11

>NZ_CP007518.2|WP_010633016.1|147597_148833_+|tetratricopeptide-repeat-protein
MKKLHTLILAPVAMAVLLSTAGWAAEQPALSDRAYRAVNKAQALITEKKYGEANAKLQEALSGAGERVYDKGVILQTLGFVAAQQEKYGQATKYFADAIATGGLPQPVAQQVRYNLAQLYMAEGNFKASISTMNQWFANLGKDEKPTPHAYITLANAHVQLKQYREAIPAVDNAIKLSAGKAPESWYLLKMAAHYELKQYKPATEVLTALVDRYPEKKKYWTQLSAMHMQAGNDAKALAALEGAYNLGMLTEASELQRLANYLAFAGIPHRAARVMEKAMKEGTIESNAANYKTLANYWHQAKELDPAIDTLAKSYKLAPSADLQLKMARMMIQSKRYQDLVAFAAKPAANASGEQRADLKFLTGVAYFEQQKPKEALSAFTQAAQNGNVSGRASPWISFLKEQQGGAVTQ
>NZ_CP007518.2|WP_005297832.1|146950_147586_+|energy-transducer-TonB
MRYLISLAVSCVVVFFLFLGMNKLITPDHRELTEKEDVTMTDFIRLKPQETLQERQRELPKPPPPKRPPPPPEMEVASTDRPQMESSPMDMPKLDIPVNIGGGNALGAYSTGGGGGGMGGNNGAIPLATFEPMMPRKAALAGLASGKVLVEFTVTERGTVSNVRIVKEEPRSYDLGKAARQTIAKWTFKPAMVDGKPQASRMQQEIEFATN
>NZ_CP007518.2|WP_005297833.1|146526_146934_+|biopolymer-transporter-ExbD
MRKRHSDSSADEAAIDLTPMLDIVFIMLIFFIVTTSFVKESGVEINRPSASTAETVKKGNIMVAVRENGQVWVDKRIVEVGAVRANIERLRAENPESAVVIQADSESRSGLVVQVMDQIRMAGVQNISIAADKSS
>NZ_CP007518.2|WP_005297834.1|145931_146459_+|MotA/TolQ/ExbB-proton-channel-family-protein
MWFWLIEEVESVRRFLGLGGDVLVALFFLTLMMWALLLERWFYFMAVYPQQVKQTKAAWLARSDHLSWSARQIRRELVSRVAMAVDKGMPVIKVLIALCPLMGLLGTVVGMVQVFDTLAITGTGSPRAMASGISKATVPTMAGMIAALSGLFFVSRLDHKAKLAVQKLEDNLKHG
>NZ_CP007518.2|WP_017784161.1|144547_145921_+|MotA/TolQ/ExbB-proton-channel-family-protein
MKGIKLAIASLIAGATLVTLPVTAAEKPVDLNALLNQVKAASTTESQLNKEREARFLADKNEQTALLAKAKADLAAETARGEQLKATFDANDKQLTELTETLRQRSGNMGEMFGVLRQFAGEFKGIFNASARRVEHPEQTALLTRLAESKELPSSDDLTAFWTTTLSRMVDGGKVSQIPATVVYGEGNQAEKTVTQIGEFNTVSEGKYLTFVPETGKFEQLSRQPENNVLEPVAKFEQGGGSVEPIFIDPSRGVILSLLVQSPTLKERIDQGGSVGYVILALGVIGTLLALFCGARLSLIGGSMRKQLKSDQIIKGNPIGEMLGAYQAHRGDNIEDLESKLDEIILRNVPKFEKGISIIKLIASVAPLLGLLGTVVGMIATFQAITLFGTGDPKLMAGGISEALVTTMQGLVVAVPMLFLYTIVQTQSRRLIQVLEEQSAGFVARYQERLHASKAAA
>NZ_CP007518.2|WP_005297842.1|143786_144551_+|DUF3450-domain-containing-protein
MKKALLGSLVSAALLTSFNLSAASASQAVDAQAATDNASKVSQQKIDNYADSAESALAQYKAALRQVDSLRTYNEQVGKMVESQSSELASMQRQIAQIDQTSTEVVPLMLKMIDSLDQFVSLDLPFQKVEREDRVAALTDLMNRADVTISEKYRKILEAYQIEEGFSRTIESYKASLDKDGSEKTYEFLRVGRIALLYQSPDGQETGMWNKQTRQWEELPQEYRSAVEQGLRIAKKQAPPALIKLPVQTAEKAS
>NZ_CP007518.2|WP_005297845.1|141120_143676_+|TonB-dependent-receptor
MLRKSRLSAAVAFALASAAVVATPVLAEEGQNVEKLQKIKVTGSRISRVDVEGATPVVSVSKAKIEQSGQQTVADYLKQASYNSFGSISPSSGSSAQSQATVSLRGLGSERTLVLLNGKRVAGSPSMGGSAINLNSIPMAAVERVEVNLDGGSALYGSDAIGGVINVILKQDYEGLEFQGRIGSPTEEGGDEKSGSIVSGITGEKGALMMVYEHDVKDEIYYKDRDYLALQGSSAPSLYGRNIKGIDAATGKTVTRTLDGIDCANTGPGFVPVGTACRFDFAQVAAKTASRTRDTVYVNGRYHINDNVDFVPQLIGSRVTSFGRFAPAAGPFSIDGTTPGGAQLLADNGFIGDKATVYYRFSNVGPRDNDVTDLTGSMNLGFEGTLPTEAVGDVEWNAGYMYSKTDNKNRGTGYVLNPAVQQEVDSGNFKNGEFSSAATNSLSYDTSRTSKMDFFQWYGGLGWSMGELPAGPIGWYLGAEYNDWVYSDTYDSQSAAGNVIGSSGNSGGGVRDVFAAYIESLIPITEQIELNLAGRFDKYSDFGSAFSPKASLRYQPLDNLLFRTSWSQSFRAPGLDDLYAADADSADFAKDYVSCQKNGVANCPEEQYTTVRQSNKNLKEETADTFGIGAAYSPIDDLNLSLDYYYIKIDDVIQLATTQTQFYQELNTGSNPNVIRDANGDVEQVYAGMVNLGQLKTSGLDFKADYKYDFNVATVRYDFGSTYILKYEEGLFAGGPMVDKKGWNAKPELRFNSGVGVNVPQWWNMDTYLSASYIDSQSQDYVDGRTEGHIASQTTWNLNVGVDTPWNGKLQAGVKNMFNVGPSLSSDGFTYDEDLYGIDGRIVYLDYTQKF
>NZ_CP007518.2|WP_010633023.1|139357_140383_-|ABC-transporter-permease-subunit
MLSYFLRRMLLIIPTFLGITLLVFTITRFVPGGPVERMLLQAQVSQNESGRSSGSKGAQALSDEQIEELKAFYGLDKPMLVAYWEWLQKLAVLDLGESTRYYEPVWDLIKDRLPVTAFFGLATFLLSYAVSIPLGVAKALRHNTRFDSVSSMLIYMAYALPAYVVGIFLITVFAFHLEWLPMGGFPGDEFDGMENSWDQIRTLFAHALLPLIAYAIGDFAILTMTMKNSLMENLSADYVRTAVAKGLPFRKAVTDHAMRNSLIPIASHLGSVLTVFFGGSFLIETIFNIDGIGLLGYEAIVERDYPTVMGILAITSMLMLVGNIVSDICVALVDPRVRFGE
>NZ_CP007518.2|WP_010633024.1|138311_139355_-|ABC-transporter-permease-subunit
MNLNPVTLKKLKRFKSIKRGYYSFIIFTTLVLLSLLAELLVNSRALMVSYQGELYFPTYGDVIPGQQFGLDYEYETNYRQLKDKFSAEGKGNWALLPPVPWNPYEQDFKQDAYPPYAPSLAERHLLGTDTSGRDVLARLVYGFRIAIGFAFIALVASYAIGVTIGCMMGFLGGRFDLVLQRFIEIWSQVPFLYVIMILVSLAKPNFGLFVAINVLFGWMGITWYMRTLTYKERARDYVMAARAQGAGTGRIIFNHILPNTLMMIVTLAPFAVVGNISTLTALDYLGFGLAPPTPSWGELLSQGINNLDAIWIVSSVVAAVSLVLIMVSFIGEAIREAFDPRKFTRYQ
>NZ_CP007518.2|WP_025201225.1|136411_138229_-|ABC-transporter-substrate-binding-protein
MNNKIKWIGALFLLVNGTWVWAASLPADLKWETNDTDPVFASPKALPGGSITMFVDSFPLTFRTVGPDSNGAFRSFIMDNQLRLISFHPNTGNPIPALATHWAIAPDNQTVYFKLDPQAKWSDGKPVVADDYTFGYEMMRSKDIKGPWFNNYYTTEVVAVEKIDDHTILVKAGTRKAKLDLLNTTELWPQPKHYYKLTPNWVKQYNWAVVPTTGPYVMTDVKKGKSITFSKQKGWWAQNYRYNQHRFNLDTIKVQVIRDHNIAFRHFLKGELDTFEMILPNWWHEKAVTPEYKQGYVQKVMAMTDTKQGGQGLHLNIATPKLADINVRLGIQHALNIDKMIKTVLRGDYDRATTFGSGFGEFTDMQLPERAYDISKARDYFAKAGYSKPGPDGILQNDKGERLNLALTYTSQEHSKRLTVLKEEAKKAGLDLELNLVDGATGFKAMLEKKHEAAWMGWAGGGLYPQYWESFHSANANKPQTNNLFNVADKELDALIDAYNVEFDMAKRAELSRQIQQRIYDLAIFVPGVQLNYVRASSWRYVMLPEVPATKNTPDLLYWPMDGYPHSSGGLLWLDPKVKEETLKAKEAGEALAPINLLDKTYARH
>NZ_CP007518.2|WP_025201223.1|152779_154924_+|ExeM/NucH-family-extracellular-endonuclease
MKGTRTLLSLAVGIALASPSVYAAGFSCPADSDLTPIPVIQGSGDKSPLIPADKFESPQSVMVKAVVSGLGENLNKGFYLLDVQGDGNPQTSDGIFVFLSDKNFTSKYPDIKPGAEVCLEAKVEEYYGHTQLKPMTDNGTARLQVIAQGTAPAAIPLRVLENETLARALERHEGMRVRLDADSALKISRNFSYDYAARRNNLVLSHQAPLMKPTQLHDADSKAAKALAKANAGNRVFLESDFKAADGKLPWLPAWEPEQGYLRIGDAPVNLDAMVGYSYNEYRLIVPQDQVITAGDLLRTSDNDRQSAPARADGTDLRVGSFNVLNYFTSHSSVGGALNVLCKDQADADSAKGCNRGAKNLEDFQKQRAKIVNAITEMDADLLGLMEMENNGFDSHSAISDLVQALNAQQKEAGKQYAFVTLPKALLQGEHYFGGDAIMVAMLYRPAKLTPQGDANVITLPVQKYLDAKGVEKQASQRDSLVQTFTVEGSKDPLTLVVNHLKSKGSGCLENLDGKEPADLQGKCTEFRVSAAKVLGEAVSKLPGQVLLVGDFNSYAREDAIRVLTDYVPTDGQRKIVSASQTFLGDQVFEQTGSEVAKSYGLVDMNVKFNKEKAISYSYEAELGTLDYALANPALAGKVIAVADWHINSFESNLFEYGRDFTGDMIKSDNPFSASDHDPIIVDLKLKEESNGGGGAMGALLLALLPLAWRRRHG
>NZ_CP007518.2|WP_010633012.1|156099_157515_-|glutamate--tRNA-ligase
MKVKTRFAPSPTGFLHVGGARTALYSWLFAKNQGGEFVLRIEDTDLERSTQEAIDAIIEGMEWLELNWDEGPYYQTKRFDRYNGLIDEMLADGRAYKCYCSKERLEALREGQMANGEKPRYDGKCRDHAHDHPADAPHVIRFRNPTEGSVVFDDHVRGRIEFANTELDDLIIRRTDGAPTYNFCVVVDDWDMEITHVVRGEDHINNTPRQINIYKALNAPVPEFAHVSMILGDDGAKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEIFSLEEMIKLFSLDAISKSASAFNTDKLLWLNNHYMRSLDPAYVAKHLAWHMENQKIDTSKGPSLPEVVTLLAERCNTLVEMAAQSRYLFEEYEAIDEAAAKKHLRGVAAEPLTLAKAKLAALETWTTEALHELIEATAAELGQGMGKVGMPLRVAVTGLGQSPAIDAVMALVGKERVLARIDRALAYIEARMAAE
>NZ_CP007518.2|WP_010633011.1|157776_159879_+|methyl-accepting-chemotaxis-protein
MQFRSIQNRILVMAGIAMTAALVILILLNQYSGQQTQKLTISSSRAALQQEAWQKVSANARAEAATITQLLQKGLSYTQQMASALALQQEGKLPLDRQQATDLLKAQLALEPQLYGAFAGFEPNGFDGQDASFAGQTALGSDSKGRFVPYFYRDKENIGTDLLLSIEKSDPDEFGNPANDYYACPKREGRSCLIDPFKVDINGQQVLVSTITTPIMVGGQFKGIAALDLAVDSISRQAQSLNSNIYDGKGETLIVSAAGVITGTSGDASLLGSRADKLLGNGWQQYLKPEVQRQELDDAFRISVPITVPGMSRNWAIIVTLPYKVVLAGADQLETQLSDMNRAAMTQQLVGAVVVLVLALATMLVIARSITGPIRQMVSLVDDIADGEGDLTKRLNTQSQDELGDLAKGINRFIDKLQVLLGDVLKTASEVNRHAGDTDRIAGQTDNNLQHHQAEMEQMLTAVQEMSYVSQEVATHANNTADSAKQAQGAADQGKVRFQQVIQSMHKVAAEAGKGAEVVEGLAHDSEQITSILTVIQGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAGNTQQAVQNTQELIEKIRHSSANAVNAINQSQQLTHQAVGEADLAEEALGSIYQAISTINDMTYQIASAAEEQSSVSETVSGNLSKTNALANDIAQDATETAKASQALRQAAERLQQLLGQFRLS
>NZ_CP007518.2|WP_005297821.1|159977_160646_+|hypothetical-protein
MPTPDRRPRGHNRRAQQRRQDESQGSLLHRINAATLPLRQRIGQGMSGLGQRGQEPRTGKFKLASPLPRKHTIGLLILIPLWLLVLAWEPAPTEPKAAPSGSLTVPIAVPAQALTVGNGASGNAPAAAKPVEEKVNGTWLQHDVQAGETLYSIFRKFELPGAELSRLIAIEGPDRPLTRLQSGRAIFILVDDTRRIQRVEIRSYGQAIYRYDRQGEGFALKE
>NZ_CP007518.2|WP_005297820.1|160918_161128_+|cold-shock-protein
MSDIRTGQVKWFNETKGFGFIEQSQGPDVFVHFSSIQSAGFKTLAEGQKVQFTVTQGKKGPQAENVTVI
>NZ_CP007518.2|WP_010633010.1|162438_162984_-|oligoribonuclease
MTVSAQNLVWIDMEMTGLDPEENVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELAKMDDWNVNTHTKSGLVARVKASQHDEAKAVAETLDFIRQWVPERTSPLCGNSIGQDRRFMVKHMSDLEAFFHYRNVDVSTIKELVRRWQPELLDQFKKSGTHQALDDIRESIAELQFYRSHVFKI
>NZ_CP007518.2|WP_017763975.1|163030_164110_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MYHTGFGSVHKLANRVAKKAKLNLGQQRRVQANRERRLQKEHTTEVDDTLFGPAIEGVVISRFGQHADVEASDGTIHRSNLRRSSISSLVCGDKVVWRPGLNAATAGVIEAVHPRHSVLTRPDFYDGVKPIAANIDQIIIVSAVMPEFSTNIVDRYLVAAEDVEIRPLIVLNKVDMLDDAARARIERQLETYRKLNYEVLLVSCESGEGLDELKAALTDKISIFVGQSGVGKSSLTNALMPGLDVLTGEISENSGLGQHTTTTARLYHFPSGGDLIDSPGIREFALWHLEADRITWCFVEFRDYLGGCKFRDCTHKDDPGCALRAAVEAGAISADRFHNYHRILETMQEARHGRQQARL
>NZ_CP007518.2|WP_010633008.1|164136_165009_+|phosphatidylserine-decarboxylase
MSITDNLKIAGQYCLPKHALSRLVGKLAAAEAGNLTTRVIEAFIKQYQVDMSEALHESPAHYKSFNEFFTRELKPGIRPLVEDAMTLALPVDGTVSQLGPISQGRIIQAKGHDYSARELLGGYEDLVAPFKDGDFATIYLAPKDYHRIHMPLDGVLESMVFVPGDLFSVNPLTAENVPNLFARNERVVATFRTPHGPMALVLVGATIVASIETIWAGNIAPTKEKKVVRWDYTGDEAITLQKGAEMGLFKLGSTVVCLFGPGMLAGFEPHLANGVTTRMGQPFAKLAEQA
>NZ_CP007518.2|WP_025201222.1|165005_165269_+|DUF2132-domain-containing-protein
MSDQPVSSQKNNPLHGLTLEAIVTALVEHYGWEKLGQEINIRCFTQDPSIKSSLKFLRKTPWAREKVESLYLYVQLKQAKQAGSHSV
>NZ_CP007518.2|WP_005297812.1|165373_165625_+|DUF2960-domain-containing-protein
MAFKITYTYGKKTKEIGYANDKFNSIYDAIAAAEGINLTSFHAMEEQLAQVCRRDKKSVKDYRENYFKELGFSNIVIERDAKE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_2

1656979-1657093

Orphan

Consensus_repeat	Method
CTTCGCTCGGCACGGCTGCACTGGTGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007518_2

>merge|NZ_CP007518|2|1656979-1657093|CRISPRCasFinder
CTTCGCTCGGCACGGCTGCACTGGTGGCCTGGGCACTGCTGGTTGGCGTTGCTGCACTGGTGATGGCTGGTTTGTCCGCAGTGGTGACTTCGCTCGGCACGGCTGCGCTGGTGGC

>NZ_CP007518|2|2|1656979-1657093|CRISPRCasFinder
CTTCGCTCGGCACGGCTGCACTGGTGGC	CTGGGCACTGCTGGTTGGCGTTGCTGCACTGGTGATGGCTGGTTTGTCCGCAGTGGTGA
CTTCGCTCGGCACGGCTGCGCTGGTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_025202288.1\|1663823_1666358_+\|fimbria/pilus-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185184
NZ_CP007518.2\|WP_010635270.1\|1661303_1661627_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_025202283.1\|1670215_1671622_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341285
NZ_CP007518.2\|WP_024943467.1\|1662724_1663267_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP007518.2\|WP_025202287.1\|1666368_1667100_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP007518.2\|WP_025202284.1\|1668678_1669914_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|294013
NZ_CP007518.2\|WP_010635276.1\|1653849_1654593_-\|lipase-chaperone	unknown	unknown	gnl\|CDD\|234937
NZ_CP007518.2\|WP_010635279.1\|1650875_1652609_+\|HTH-type-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP007518.2\|WP_010635275.1\|1654589_1655501_-\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_CP007518.2\|WP_025202286.1\|1667102_1668128_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
NZ_CP007518.2\|WP_017781004.1\|1649199_1650468_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl\|CDD\|180392
NZ_CP007518.2\|WP_081050808.1\|1647167_1648343_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|224890
NZ_CP007518.2\|WP_010635268.1\|1663366_1663756_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_010635274.1\|1655792_1656218_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_025202291.1\|1648460_1649090_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|239344
NZ_CP007518.2\|WP_010635271.1\|1658063_1660811_-\|collagenase	unknown	unknown	gnl\|CDD\|366791
NZ_CP007518.2\|WP_025202285.1\|1668136_1668676_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP007518.2\|WP_010635273.1\|1656239_1656854_+\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
NZ_CP007518.2\|WP_010635278.1\|1652644_1653040_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP007518.2\|WP_025202290.1\|1653071_1653785_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_025202287.1\|1666368_1667100_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	7.53143e-66
NZ_CP007518.2\|WP_025202283.1\|1670215_1671622_-\|AMP-binding-protein	gnl\|CDD\|341285	cd17630, OSB_MenE-like, O-succinylbenzoic acid-CoA ligase. This family contains O-succinylbenzoyl-CoA (OSB-CoA) synthetase (also known as O-succinylbenzoic acid CoA ligase) that belongs to the ANL superfamily and catalyzes the ligation of CoA to o-succinylbenzoate (OSB). It includes MenE in the bacterial menaquinone biosynthesis pathway which is a promising target for the development of novel antibacterial agents. MenE catalyzes CoA ligation via an acyl-adenylate intermediate; tight-binding inhibitors of MenE based on stable acyl-sulfonyladenosine analogs of this intermediate provide a pathway toward the development of optimized MenE inhibitors.	4.60879e-135
NZ_CP007518.2\|WP_024943467.1\|1662724_1663267_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.93432e-29
NZ_CP007518.2\|WP_025202288.1\|1663823_1666358_+\|fimbria/pilus-outer-membrane-usher-protein	gnl\|CDD\|185184	PRK15284, PRK15284, putative fimbrial outer membrane usher protein StfC; Provisional.	0
NZ_CP007518.2\|WP_010635276.1\|1653849_1654593_-\|lipase-chaperone	gnl\|CDD\|234937	PRK01294, PRK01294, lipase secretion chaperone.	4.5833e-12
NZ_CP007518.2\|WP_081050808.1\|1647167_1648343_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|224890	COG1979, COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion].	0
NZ_CP007518.2\|WP_010635275.1\|1654589_1655501_-\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	3.34515e-67
NZ_CP007518.2\|WP_025202286.1\|1667102_1668128_+\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	1.78985e-20
NZ_CP007518.2\|WP_010635271.1\|1658063_1660811_-\|collagenase	gnl\|CDD\|366791	pfam01752, Peptidase_M9, Collagenase. This family of enzymes break down collagens.	1.56943e-83
NZ_CP007518.2\|WP_010635279.1\|1650875_1652609_+\|HTH-type-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP007518.2\|WP_025202291.1\|1648460_1649090_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|239344	cd03046, GST_N_GTT1_like, GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.	3.15403e-35
NZ_CP007518.2\|WP_017781004.1\|1649199_1650468_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl\|CDD\|180392	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.	0
NZ_CP007518.2\|WP_025202285.1\|1668136_1668676_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.46932e-26
NZ_CP007518.2\|WP_010635273.1\|1656239_1656854_+\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	1.4684e-107
NZ_CP007518.2\|WP_010635278.1\|1652644_1653040_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.70512e-29
NZ_CP007518.2\|WP_025202284.1\|1668678_1669914_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	2.79144e-16

>NZ_CP007518.2|WP_010635273.1|1656239_1656854_+|superoxide-dismutase
MSHTLPALAYAYDALEPHIDALTMEIHHSRHHQTYINNLNAALADHPELAALPVEELLARFDSLPVQLQGAVRNHGGGHANHSLFWRVMSPQGGGEPAGELAAAIQRDLGGFEAFKQAFTQAALSRFGSGWAWLVVDGSGKLQVVSSANQDSPLQDGLVPILGLDVWEHAYYLKYQNKRPDYIAAFYKVIDWNEVARRYVAALA
>NZ_CP007518.2|WP_010635274.1|1655792_1656218_+|hypothetical-protein
MVHWKVQTMSGNRHFDAGEHAKALSCYQQALWLARQQFADWHDVDEAVAALVVAHHNLADLLVAMALPDRAADLLCHIHDCLLATSQSPASSGALRDAALRHTRSTHTELLAFVRKHGSHDGIRRCLGQCLCQTEPAPQLH
>NZ_CP007518.2|WP_010635275.1|1654589_1655501_-|triacylglycerol-lipase
MKKWLLVLLCALPMLGQAASYTQTRYPIVLVHGLFGFDKLLGVDYFYGIPQALTRDGAKVYVAQVSATQSSELRGEQLLKQVQQVLAITGAEKVNLIGHSHGGPTIRYVASVAPELVASATSVGGVNYGSEIADLVRANVAPGSVAEKLAVAAASALSGVISLLSGGSQLPQDPLAALDALTSAGAQRFNQRYPEGLPSQYCGEGPMQAANGVYYFSWSGRGTMTNILDPVDPALALTGSFFKEPNDGLVGVCSSHLGKVIGTDYRMNHLDEVNQSFGIRHLFETDPVGLYRQHANRLQRLGL
>NZ_CP007518.2|WP_010635276.1|1653849_1654593_-|lipase-chaperone
MNKAWLMAALLGAALLLGGWQLWPTPSHDSAAPLAQEAEPVSPLARQTAPSPDEHSLQARYEAFLAAENSLTVPTDPGLASLQVLFDEREQLRQQSFTPAEQDQLFAEDRLMEQWTLRRKALAEAGDADKPLLASELELWLAEQPQWFREAEANSRLLGDLQSLERLPAAERDAVLREQLGPEAADRLHQLAESQQGFEQQLAGYLAELKPLPAERRAEQQPEILARWFEPGQWRRVEALTRLRLGE
>NZ_CP007518.2|WP_025202290.1|1653071_1653785_+|hypothetical-protein
MRNTVIALSLGLGLGLCSLPSMAASLAEQFSLMEKGAESALDTRLFSHDGIDIKAWVDGAPVIIAVPIMNEQGKQEGESRYYFKGGKLFGVKEPAAQFAFDDGGKLTRWLDEKGQPAEFVSKMSMQQREVWLTKRAAELGQLFAPSAAEQKAAKGGVKLKGAELAHWLCNGKLMALAGGDKVTFEPAKLKSRAEGIEGEVSLRQDKGWQDLSLKCEVQGPQVTRLTWQPLPGANKPQ
>NZ_CP007518.2|WP_010635278.1|1652644_1653040_+|acyl-CoA-thioesterase
MLEMQIQPRFQETDALGHINNTVPAVWFESARDPLFRIFSPELDVHNWHLIIAGYTVQFKRELFYGQQVLIKTGVRRIGSSSFTLWQEAWQEGELAVTAETTLIHFDYQSRQSIPLGDRHREELRVWLIES
>NZ_CP007518.2|WP_010635279.1|1650875_1652609_+|HTH-type-transcriptional-regulator-SgrR
MPTSRLYQQFQRLARQLGCDEREISLAEVADLLCCTPRNARLLLRRMQEQGWLGWSAEAGRGRRSRLTLLDNQESLTRRRLRDLLIQGQLAQAVRLAEDRLDLLTPLLIEQLGQATRAGRQILRVPYYRPLPQLLPTGPLRRSEIHLSRQIFNGLTRRNEENGEIEGDLAHHWECLGPCHWRFYLRPAVRFHHGRELVVEDVTESLQSLRDRPLFAHLARLESPWPRTLDLHLDSPDPLLPHLLAEPVAVILPRELKGEAGFALQPAGTGPYRVTANDPMHLCLEAFDDYFGLRALLDEIDIWMLPELAERLESHLQLGRDSPELGTMRGESELESGCYFLLQDERSGALQDPALRQWLAGLLNPIALMARVAPELQRGWTSALGLLPHWREAQPAPLPAPAGRPRQLVLACFNQHLEFNECANAMSSLLAEQGIELEVRTLDYGRWVSGADEDVDLWLGTLNLEHEHAFAPYAWLQGTPLLRKVWGGQHGLWQGLTQWRASGEEPGPRALLASVQQQGWFVPLFHHWLELESRVGVHGVRMTALGWFDFRSAWLRPELAVGAGDTTGELESRGGPR
>NZ_CP007518.2|WP_017781004.1|1649199_1650468_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MKDATLALHHGFANDPTTKAVAVPIYQTVAYEFESAQHGADLFNLAVPGNIYTRIMNPTNDVLEQRMAALEGGIAALVVSAGSAAITYAIQALTAAGDNIVSTPQLYGGTYTLFAHMLPSFGVEVRFAKDDSAEAIAALIDDKTKAVYCESIGNPAGNIVDIAALAKVAHARGVPLIVDNTVATPVLCKPIEHGADIVVHSLTKYVGGHGNSLGGVVVDSGKFPWADHAERFPQLTQPEPSYHGVVYTEAFGPAAFIGRVRTVPLRNTGAALAPMNAFLLLQGLETLSLRMERHVDNALQVAHHLKHHPKVAWVSYAGLPGHPHYLLAEKYMAGRPSAILSFGLKEGYEAGVRFYDALKIFKRLVNIGDAKSLACHPASTTHRQLSEEEQTKAGVKPEMIRLSVGIEAIEDILADLDQALEA
>NZ_CP007518.2|WP_025202291.1|1648460_1649090_-|glutathione-S-transferase-family-protein
MIVLHHLNKSRSQRIIWLLEELGLPYEIKAYQRDAATFLAPPELKAVHPLGKSPVIEFDGRVLAESGAITEYLIARHAPDRLAPAADSPDYAEYLQWLHFAESSGILPLLLDMFVRKDGSPMRFLPDYAKAECAKVLGYLDEVLASRRYLVADRLTGADILNSFLVDLLAQSGQLAQFPHLQAYWQRLNAHPARQKAAALERELDRSAE
>NZ_CP007518.2|WP_081050808.1|1647167_1648343_+|iron-containing-alcohol-dehydrogenase
MHSTEGSAVYNFQYANPTRVCFGEGQIAKLPELIPAGSRLLVLYGGGSIKQNGVYEQLTQALAGREWLEFPGIGANPQYDQLMEAVDLVKRERIDFLLAVGGGSVVDGSKFVAAAARFEGDDPWEILLHKAPVKAALPLGCVLTLPATGSESNPAAVVSRGEAKLSFMNPLVQPVFAVLDPTTTYSLPPRQVGNGVVDAFVHILEQYLTFPVGGEVQDRLAEGLLQVLVDNGPRALAEPTNYQVRANLMWAASLALNGLIGRGVPQDWSTHAIGHQLTALHGLDHAQSLAVVLPSLLREQAAQKQEKLAQFAERVWHSSREDKALRIEEAIIRTEQFFQQMGVGTRLADYGLDARCIPGICSNLKLFGLTALGEQQDIDPDKVARILSHAL
>NZ_CP007518.2|WP_010635271.1|1658063_1660811_-|collagenase
MNNLGTRLLLLAAPGLLATSALANYSPSDWQQYQLKGESSRQLGDQLTEVTYELSARSGDAPYQQLRVYRRFDWSEANLAALAEQQCGEPQLKIEQGWQIRYLSCEEVVPAGKAVPASSYDFGYGMKQGRWEPLAGTPTAPRQDRLPLAERVILGHSEQELDRCELNAEGRCAEQAWQYQPQNWQQLKVLEETPNERDGRLEQIFFRLQPVAGSQAARQVSELHVWRQYTWLLEQAKTQQECDEPQTRQEGDKTISYRVCRQTLPAGSEVQVVLKDTGYQYPVGGSEWQTLPETTEWQESRVLNRPIVLASKEEQLDCRRADGRACSEPDLPDTDLLDAEAARIVQDASGQPAPVWQENYGHDDAKLLAVSRGIQSLLAANQPAHPAMKLLLEYVRAHNYHNYGKHKEDGPAAAEALAEALTALGAHPLLFPEQPTDEVGSVIGAWSIALHGQFKSPAVQSRFGTLLGEFNQMLAYSTRHASEINGQHAWATGLFDLLNFLDFASDYSDPFASDFRQQDGELRKQLHALGMSELALWKGRDGADLFLLNNVLDAYTRLYRVARYTRPDELDGYRRLLDDSVIALVRHHDLIPGGQQSQDLLEDMSLTLSTYYLTYTDRTSEACISGDFAGLCTPIRVEDVLPFEHTCSPTLRLRAQDLTLDQAEGICRELGAEEQQFHQQMETGWQPVADDHNEALELVIFDSSADWKRYGSALFGGVSTDNGGIYIEGDPARPGNQARFFAYEAEWKRPAFQVWNLRHEYVHYLDGRFNQYGSFGHYPLNRTTWWSEGLAEFIAHGQCFARGLDNVAGRPAGDRPALADILHLDYDKGGEMVYSWSYTVHRFLNETGRGASWLAMAQALRNPDQQQAMSAFEAELDQLIANDSEAYQQWLGRELLPWWEANKDSDECKANDSSH
>NZ_CP007518.2|WP_010635270.1|1661303_1661627_-|hypothetical-protein
MNTSTASVRNSAIRFASSAAAAMLLGAALLPATASAYDGSVTFTGTIYEAPCDFADNSVTCYSGTQRQTMDLVSLQQAGSLNTISSTMQYKLSAGSSNMAIVTVSYL
>NZ_CP007518.2|WP_024943467.1|1662724_1663267_+|type-1-fimbrial-protein
MKANKILVAMGVGSMLLCGTAFAAGNTGSGKVTFNGEIINAPCSVAPESVDQVVEMGQISTKELANGGESNSKPFSIKLLNCEISDQEDAVKVTFSGAKDPVDSSLLVIGGGDAKGAGIKMTAPGGAAIVLGTPTAAFGLVNGDNELPFSAVLKGYADQTTNPLQAGAFTAVTNFTLSYE
>NZ_CP007518.2|WP_010635268.1|1663366_1663756_+|hypothetical-protein
MMAAMVLQLVMMAGSVHANEISDGLAESGCTLDVQRSIPLQARQPGTLKISGCQVEGAAEASLPFISMSVRGAMSDELGILNNGQYHKVSGESFIISDIVNSDLEFNLGLTSSQLFFPDSTTLFELNYM
>NZ_CP007518.2|WP_025202288.1|1663823_1666358_+|fimbria/pilus-outer-membrane-usher-protein
MSVSTSDSVRKKHYSKMAFMLCVPGLMAVANHAWAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLPLQKIPFYETDTGKGKGGVACLPQEVIPKLALTDEAIAKIDSWHDGQCANLLALDGVVIANDIGNGLLRIAVPQAWMKYSDPNWIPPEQWDEGIPGMMLDYNINAQINEGDGYSNRNISSYGTLGFNYGAWRLRGDYQTNAYWGDNDRTTSELNRIYAYRPLPNMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTVSQSGRILYETNVPAGPFRIQGLDSSVRGRLDVRVEEQDGSVNSFQVDTATVPYLTRPGYVRYNLAVGAPSEQTDSVHDVHGPAFVTGDFSWGVANSWSLYGGSLVAGEYNSMGLGIGRDLYAFGAISADLTQSISKLPGLSTKIGQSVRVNYAKQFDEYNSSITFAGYRFSQHDFMTMSQFLNNKDRLEKNENTSSDDYNNWGDKELYTITANKTFWADDAAKALTVYLDYTHRTYWEHDAEDRYGLTINKNVNIGSFKDVSVYVSAYKTKTENYEDDKSVMLTLSMPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYYNHNSDIGAVSLNAYSVQSEYTSVGASLRGGLTATEHGAALHQATRRGGTRMMVDTDKTSGVSFNNGRAVTNRFGVAVISDMTDYRKSDTRVDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEIAEGFKLLANVKLSDGSVPPFGATVVRDSGRVLSVVDEDGLVYLTGVKPNEAFELSWGGARQCKIVAPQQVTDLSMKTLTCK
>NZ_CP007518.2|WP_025202287.1|1666368_1667100_+|molecular-chaperone
MKKLLSYTCLAVLGMTSLNVSAAIVLDRTRAVYPGGAKSISLNIKNENQKLPYLAQSWIEDAQGQKISSPFVVLPPVQRVDANQKSIVRIASVPAIDSLPKDRESIYYFNLREIPPKSEKSNVMQIAVQSKIKLFYRPEAILPERGAIWQDQVLITKQGKTLQVNNPTPYYITYVGLGHPQGKGRTAIKGFSAFMVAPKSEQTVNIPEALGNEFVISYVNDYGGYMDIKYQCAGNACKAVKER
>NZ_CP007518.2|WP_025202286.1|1667102_1668128_+|fimbrial-protein
MILRTGVLGIIFLSMPVMAINGEIRAATKTYDIELKKEDIDNQVNAKKEFKWDLNSTYPGTAFCPDQDIRNQPIYYKAVMSAGLPSVGGGFVKLNEFLDLKVDIWIEGNRRAYVTAPFTEESNQGQFTYYKSKGSADFGFRSGSKGIVTFRVRKPIINGVQIDDHEIVEMFGRLGRTDSGFNNEVMSRIVIKSSVLYVPEKCTINGGQTIEVEFGDLPGTGLDGNNFEKTVPLNFVCSGGVFDKDASLKINLAISGKPTSFSQSYLRTTRDGYKGGDVINNLGIKFKQLDGSTLNLNDWYPVSMQGNIGDWGFIAAPISPAGAEVAAGDFYATGTIVASFQ
>NZ_CP007518.2|WP_025202285.1|1668136_1668676_+|type-1-fimbrial-protein
MLRLGCLGLLILPLWVNAAADDLELLGGELNLHGRIIDQPCEIAPESIEQEVEMGVVDVKELYANGAGVQVPFSIRLTNCKPGIFRMAKVTFTGSQDPQLSGGLAFTAGMAKGAGIRLYDVTQSPLDLGTPSRGYLLGGAADNELQFFARVEAHPDALAAKTIQPGDYSAVANFIVAYE
>NZ_CP007518.2|WP_025202284.1|1668678_1669914_-|winged-helix-turn-helix-transcriptional-regulator
MSNKNYKIAEDIFFSAAIFRLSKGDKDIKLSNKEAELLEMLCDEAGTVIARSKLQDALWPNQDNTDTNLNRQILSLRRKLESFGLMDAIDTIPRVGYIFCAPIEVAGETEEAVPNEEIQTIATANVPQVRRQYTRRKYDRYFSPQRILLVALLLVSLTALVISIYHYATANTLRTINLGHVSLYMTSDTEQALKVKIDALSPLVQKISRKDDEQVSLLVGKEAISYFSIDNNSRQLSENVFLLRNGHPLAEEVQCVISTMAQQGKNVSHNYYNNTDTTVRYHSNCQAPDNWVELTRKNKFIVTLSREIVVATIIATDSQGQTLFNLDSVGDLERDDGDISVEVKNTIVNYIDQKALTNNGMVATLVAALTPPKQKALFVQLPGGIYLSSYLGGVINWPSLGNSKVIQRNDF
>NZ_CP007518.2|WP_025202283.1|1670215_1671622_-|AMP-binding-protein
MPPLSDHHSHPEPCPVRHWARSAPARIAIHAAVPLTYRQLDARLNSLCQQLAMAGLQPGDRLAAVVRGALEDVLLAWACVRSAIVFCPLNPAFPLTRQTELATLLDVRACWSAGEIPTGGWQPLRLDFTRELAADEGDCMLAPARLNNMILTSGSSGTPKAVVHRLANHLASARGSTSQIPLDERCGWLLSLPLFHVGGYAILFRVFLAGAALVLDDRARPLRERLEQQPITHLSLVPTQLWRLLAQGFDPARTRLRELLLGGAAIPQPLVHRLTAMGLVPKVSYGLSEMGSQVCTGRPAAAGVVGKALPGREVCIRQGEICVRGDTLFAGYFKEGGLARSLDEDGWFHTRDKGHFTANGELVVEGRLDNLFISGGENIQPETIEQRLVDHPAVAQALVVPVPSDEWGQRPAAFIDWHGEPRPYAELATWIRQTLPGFMVPDQWHPWPDLGGQLKPQRRQYQRMLQEQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_3

2048925-2049062

Orphan

Consensus_repeat	Method
CCAACTCGCGTTGGGTCTGGTCGTTATCAACCAGACGATGCTTTCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007518_3

>merge|NZ_CP007518|3|2048925-2049062|CRISPRCasFinder
CCAACTCGCGTTGGGTCTGGTCGTTATCAACCAGACGATGCTTTCACAGTTTTATCAGTTATGGGTAACCACGATAAAAAGTGCATGGCATCCAACTCGCGTTGGGTCTGGTCGTTATCAACCAGACGATGCCTTCAC

>NZ_CP007518|3|3|2048925-2049062|CRISPRCasFinder
CCAACTCGCGTTGGGTCTGGTCGTTATCAACCAGACGATGCTTTCAC	AGTTTTATCAGTTATGGGTAACCACGATAAAAAGTGCATGGCAT
CCAACTCGCGTTGGGTCTGGTCGTTATCAACCAGACGATGCCTTCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_049866856.1\|2041771_2043142_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240554
NZ_CP007518.2\|WP_005304399.1\|2057903_2058353_+\|pullulanase	unknown	unknown	gnl\|CDD\|199891
NZ_CP007518.2\|WP_010634992.1\|2041271_2041748_+\|FxsA-family-protein	unknown	unknown	gnl\|CDD\|377238
NZ_CP007518.2\|WP_010634982.1\|2063028_2063736_-\|thiamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226360
NZ_CP007518.2\|WP_005309514.1\|2043353_2043647_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP007518.2\|WP_080628999.1\|2047929_2048118_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_010634984.1\|2060719_2061403_+\|ribonucleotide-reductase-system	unknown	unknown	gnl\|CDD\|236330
NZ_CP007518.2\|WP_005309517.1\|2043689_2045324_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP007518.2\|WP_010634988.1\|2048191_2048848_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP007518.2\|WP_025202180.1\|2045940_2047872_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
NZ_CP007518.2\|WP_025202179.1\|2058561_2060709_+\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|274168
NZ_CP007518.2\|WP_005309503.1\|2037931_2039251_-\|anaerobic-C4-dicarboxylate-transporter	unknown	unknown	gnl\|CDD\|236503
NZ_CP007518.2\|WP_010634979.1\|2067022_2067952_-\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
NZ_CP007518.2\|WP_005309505.1\|2039378_2040821_-\|aspartate-ammonia-lyase	unknown	unknown	gnl\|CDD\|237031
NZ_CP007518.2\|WP_010634980.1\|2065427_2066408_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP007518.2\|WP_010634987.1\|2049069_2051937_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP007518.2\|WP_010634983.1\|2061589_2062960_+\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224787
NZ_CP007518.2\|WP_005309520.1\|2045419_2045917_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226429
NZ_CP007518.2\|WP_005304376.1\|2066642_2066933_+\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP007518.2\|WP_010634981.1\|2063808_2065431_-\|thiamine/thiamine-pyrophosphate-ABC-transporter,-permease-protein	unknown	unknown	gnl\|CDD\|181853

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_049866856.1\|2041771_2043142_-\|MATE-family-efflux-transporter	gnl\|CDD\|240554	cd13149, MATE_like_2, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	5.39385e-140
NZ_CP007518.2\|WP_005304399.1\|2057903_2058353_+\|pullulanase	gnl\|CDD\|199891	cd02861, E_set_pullulanase_like, Early set domain associated with the catalytic domain of pullulanase-like proteins. E or "early" set domains are associated with the catalytic domain of pullulanase at either the N-terminal or C-terminal end, and in a few instances at both ends. Pullulanase (also called dextrinase or alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The E set domain of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase. This domain is also a member of the CBM48 (Carbohydrate Binding Module 48) family whose members include maltooligosyl trehalose synthase, starch branching enzyme, glycogen branching enzyme, glycogen debranching enzyme, isoamylase, and the beta subunit of AMP-activated protein kinase.	5.94285e-20
NZ_CP007518.2\|WP_010634992.1\|2041271_2041748_+\|FxsA-family-protein	gnl\|CDD\|377238	pfam04186, FxsA, FxsA cytoplasmic membrane protein. This is a bacterial family of cytoplasmic membrane proteins. It includes two transmembrane regions. The molecular function of FxsA is unknown, but in Escherichia coli its over-expression has been shown to alleviate the exclusion of phage T7 in those cells with an F plasmid.	4.02912e-38
NZ_CP007518.2\|WP_010634982.1\|2063028_2063736_-\|thiamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226360	COG3840, ThiQ, ABC-type thiamine transport system, ATPase component [Coenzyme metabolism].	8.74022e-97
NZ_CP007518.2\|WP_005309514.1\|2043353_2043647_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	4.25275e-45
NZ_CP007518.2\|WP_010634984.1\|2060719_2061403_+\|ribonucleotide-reductase-system	gnl\|CDD\|236330	PRK08665, PRK08665, vitamin B12-dependent ribonucleotide reductase.	2.40839e-13
NZ_CP007518.2\|WP_005309517.1\|2043689_2045324_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP007518.2\|WP_010634988.1\|2048191_2048848_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	8.75951e-95
NZ_CP007518.2\|WP_025202180.1\|2045940_2047872_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.58393e-92
NZ_CP007518.2\|WP_025202179.1\|2058561_2060709_+\|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase	gnl\|CDD\|274168	TIGR02504, ribonucleotide_reductase, ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent. This model represents a group of adenosylcobalamin(B12)-dependent ribonucleotide reductases (Class II RNRs) related to the characterized species from Pyrococcus, Thermoplasma, Corynebacterium, and Deinococcus. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA. This is the rate-limiting step of DNA biosynthesis. This model identifies genes in a wide range of deeply branching bacteria. All are structurally related to the class I (non-heme iron dependent) RNRs. In most species this gene is known as NrdJ, while in mycobacteria it is called NrdZ. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP007518.2\|WP_005309503.1\|2037931_2039251_-\|anaerobic-C4-dicarboxylate-transporter	gnl\|CDD\|236503	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed.	0
NZ_CP007518.2\|WP_010634979.1\|2067022_2067952_-\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	0.00243185
NZ_CP007518.2\|WP_005309505.1\|2039378_2040821_-\|aspartate-ammonia-lyase	gnl\|CDD\|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NZ_CP007518.2\|WP_010634980.1\|2065427_2066408_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP007518.2\|WP_010634987.1\|2049069_2051937_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP007518.2\|WP_010634983.1\|2061589_2062960_+\|PhoH-family-protein	gnl\|CDD\|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	7.55875e-179
NZ_CP007518.2\|WP_005309520.1\|2045419_2045917_+\|hypothetical-protein	gnl\|CDD\|226429	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown].	6.66983e-32
NZ_CP007518.2\|WP_005304376.1\|2066642_2066933_+\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	1.98701e-14
NZ_CP007518.2\|WP_010634981.1\|2063808_2065431_-\|thiamine/thiamine-pyrophosphate-ABC-transporter,-permease-protein	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0

>NZ_CP007518.2|WP_010634988.1|2048191_2048848_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MFVYSPPLEPWLDILFKDKDIMVVNKPTGLLSVPGRGPENEDSVLHRVKQQHPKAAAAHRLDMATTGVLVIPLNPNSHRELSRQFRERETEKHYLAWVWGEPELDAGEVNLPLCVDWPNRPKQKVDFEEGRHALTLWQKLKVENSNSLIKLTPITGRSHQLRVHMLELGHPILGDNLYANPEALAAAPHLYLHAASLTISHPRSGERMTFEAPAPFPV
>NZ_CP007518.2|WP_080628999.1|2047929_2048118_+|hypothetical-protein
MDISSSASASFGSALMTASLAKKQQTQEGESALKLLQTAAQSAPVAPTSANASLGSKIDIRV
>NZ_CP007518.2|WP_025202180.1|2045940_2047872_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MKAKTKAWPLLIVLYLSILLFTGSTLYCLAQIQNATRVMEKYTYDVSWALMQLQLELGRFLNSVEIYHYGGIDHDTLMLRYDILWSRTPILLSGQLRQSMKDKQKTLRLVQLIESNIREMEPNITNLKSGTPDYQQIMMRLSPLQEPLSYSLASVMQKNINVYSGNDKRFGQLRNALLFMVSGLVLSVMLLSGLLIREARRHFKVARIDPLTGLSNRLALLEKMESYASKETPFGLVLVDINDFRDINSKFGYNTGDFLLQELAKRMRSLCENGEWVARLGGDQFAMIQRESSDLRQVRELVARLLHALKQDIIIDNYPFRLEVGIGIAFFPMDSKQAQELLSRAEQALFHSRKTHVPYVIYDSSLLNETARRKHLASDMIMALEHNALELYYQPIVNLESGRCEAVEALLRWRHPELGFIPPNEVIQVAEEFQLAEKLGSWVLNTACEQLYQWQQLGLVDLQMCVNISPGMYQRNLLKLVAKALMDHHIPAASLVLEVTEDTTMREVKNSLQLMQDLNQQGVQLALDDFGTGYSSLSYLQKLPVSKVKIDRSFIQGIDTSIEASELVANICRMGSMLGKSLVCEGIETQAQLDVLRTLTDIHLYGQGYLFSRPEQAEKVYQTLLEMEEEWLERRQPDKAYLI
>NZ_CP007518.2|WP_005309520.1|2045419_2045917_+|hypothetical-protein
MRVLGLISLLFSLAMPAMALETPQGPVILKVTGNVQPAEATEGVVSFDLAMLKALPQHEIVTANPWVDKPHKYVGPKLADLLAAVGADGKAITLTALNSFQIRLNWDKVKQYDPILAWQDDGVTMRVRNKGPLWFILPLDQYPELKRSEFTDMMIWQLNAIDIQH
>NZ_CP007518.2|WP_005309517.1|2043689_2045324_+|chaperonin-GroEL
MAAKEVKFGNEARIKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVVAAVAELQALSQPCADNNAIAQVGTISANSDEKVGKLIAEAMDKVGRDGVITVEDGQGLEDELAVVEGMQFDRGYLSPYFVNKPETGAVELDDPFILLVDKKISNIREMLPVLEGVAKAGKPLIIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGMELEKATLEDLGRAKRIVITKENTTIIDGVGDAGLIESRVAQIRQQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLTGLRGDNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGNYGYNAYTEQYGDMLAMGILDPTKVTRSALQFASSVAGLMITTECMVSELPKKDTPAMPDMGGMGGMGMM
>NZ_CP007518.2|WP_005309514.1|2043353_2043647_+|co-chaperone-GroES
MKIRPLHDRVIIKRIEAEAKSAGGIVLTGTAAQKSTRGEVLAVGTGRILDNGDVKALAVKVGDKVIFNEGYGVKTEKLDGQDVLILSETDILAIVEE
>NZ_CP007518.2|WP_049866856.1|2041771_2043142_-|MATE-family-efflux-transporter
MYRDQPVTRPNPLLTAPMTSVLLRMTGPMILGIVAILAFNLVDTFFVGMLGTQALAAISFTFPVTFVVTSLAMGLGAGLSAVMGHALGQGKHEEAARITTDNLFLAVLLVTFIAVAGALTIHPLFRLLGASDALIALIYDYMLIWYLTVPMLVLPMVGNAAIRATGDTKTPSLVMTVAGLVNGVLDPLLIFGIGPFPEWGIRGAAIATSLSWLMAMLVSLYILRHREGLLRWRLSPRPQLLAHWRALLHVAVPASFTNMLNPLANAVLMTIFAGLGTEVVAAYGAASRVEALLLIVMMALSSVLAPFISQNCGAGNPARAKAALQLCMRFALLFQLAVYALTWLLAPFIADLFSDHPQVVRLIVLYLHLVPIGYGFQGMVMLLASALNGVRASSISFLFNGLRLFVFLLPGAWLGAKLGGEQGIYLGILLANLAAGTLAWWYARHRFEQLCHQGKP
>NZ_CP007518.2|WP_010634992.1|2041271_2041748_+|FxsA-family-protein
MGKLFLLLVGLVVLELTVMIEVGSVIGALPTVGLLILTAVLGSSLVRSEGIKTLFNAQQKMQQGEMPGREVMGGMMLALAGLLLIIPGFVTDFFGILLLQPWLRNKLADKLIGSNQFRMQMGGFQSRQQTFDEVPGSDQPGQSQRAGTTIEGEFERKE
>NZ_CP007518.2|WP_005309505.1|2039378_2040821_-|aspartate-ammonia-lyase
MSDIKNVRIEEDLLGTKEVSNDMYYGVHTLRAVENFKISSQKISDVPEFVRGMVLTKKAAALANGELGTIRPEIADKIVEACDLMLNTGKCFDQFPVDVYQGGAGTSVNMNTNEVLANIALELMGLEKGRYDVINPNDHVNKCQSTNDAYPTGFRVAVVNSTDTTLFALEALIAAFDAKAAEFKNILKMGRTQLQDAVPMTLGQEFHAFAVTLREEIKSIKRCQELLLEVNLGATAIGTGLNTPPEYSALAIKRLAEITGRAYVPAEDLIEATSDCGAYVMLHGAIKRMAMKLSKICNDLRLLSSGPRTALKEINLPEMQAGSSIMPAKVNPVIPEVVNQSCFKVFGNDVTITFAAEAGQLQLNVMEPVIGQAMFESLSLMEKACISLREKCVEGITANPEICMNHVLNSIGIVTYLNPFIGHHEGDIVGKICAQTGKNVREVVLERGLLTAEQLDEILSIENLMNPQYKAKRYTREATV
>NZ_CP007518.2|WP_005309503.1|2037931_2039251_-|anaerobic-C4-dicarboxylate-transporter
MIGIELLVVLAAIYLGARIGSIGIGFAGGLGVLVLTWGLGVQIPSDQLVTYIPWDVIMIIASVICAIACMQLAGGMDYLVHLAEKALRKNPKYITFAAPVVTYLMTMLAGTGHTAFSTLPVIAEVAKEQGIRPSRPLSIAVVASQIAITASPISAAVVAFSGMLEPFGVDYLTLLAICIPSTFIACILGAFVANMLGKPLDQDEVYLERKAKGQIKLRGTTQLEIKPYAKLSVWIFIAAIVAVMAYATAISGKVGLITNPPIPRDGAIMGIMLAAATIMTLVCKLDVTQVTNMPTFKSGMSACICVLGVAWLGNVFVKGNMDTIQLIAGDLLNQYSWLLAVVLFFAAMLLYSQGATTKALMPAALALGVSPLTAIASFAAVSALFVLPTYPTLLAAVEMDDTGSTRIGKAVFNHPFFVPGVATIAIAVALGFFFGGMML
>NZ_CP007518.2|WP_010634987.1|2049069_2051937_-|RNA-polymerase-associated-protein-RapA
MPFALGQRWISDTETDLGLGTVVAVEGRMVTLLFPATGENRMYAKEEAPVTRVSFNVGDQIASHEDWTMMVDEVQEKDGLLIYVGVRTDNDEPVALKEVFLNNFIKFNKPQDRLFAGQIDRMSRFTLRYEALVNQHKRRRNPTRGLAGGRVSLIPHQLYIAHEVGHRYAPRVLLADEVGLGKTIEAGMIIHQQLLSGRAHRVLILLPETLQHQWLVEMLRRFNLHFSLFDEERCIEAFADAENPFETEQLVICSLDFLRKKRRRFEQLLEAEWDLLVVDEAHHLEWSEEAPSRAYEMVEALAEQVPGVLLLTATPDQLGHQSHFARLRLLDPERFYDYEAFLAEEQAYGQVASAAQELLDGEALSEAAKQTLAGQLDGLDLTEAAARQQAVAKLLDQHGTGRVLFRNSRANIQGFPERHLNVYPMPLPEQYKTAIKVMGMMGGNGGDLQTRALRYLYPEKIFQQFEGDNASWTQFDPRVDWLLELLISARQQKILVICSEAATAIALEEAVRTREGIRAAVFHEGMSILERDKASAYFAQAEGGAQVLLCSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDRIGQQNTVEIHVPYLEGTSQRALQLWYHDGLDAFEQTCPTARPVFEAVRDELFELLAANTGEQVTLEALLTRTRELHEPLKAKLEQGRDRLLEIHSSGGEAAKQLVEKLAAEDDDTGMISFALKMFDEIGVNQDDRGENALVLMPGDHMLVPSFPGLPQDGMTITFDRTTALSRDDMSFLSWDHPMMRGGIDLILGSEIGATSVALLKNKALPVGSILLELIFVAESAAHPQLYRFMPPTPIRLLMDKNGNNLGEKVAFDAFNRQLTPVNRHLGSKLVTASQPVIHGLIGQGQAIAEGLKANIVDQARAQMAQTLQQDLDRLEALKAVNPNVRDSELDYLRNLQAELHHLIDQTQLKLDAIRFIVVTHN
>NZ_CP007518.2|WP_005304399.1|2057903_2058353_+|pullulanase
MFKRTVTMMLAAGTLVLGGCASNGGAEQAADNSDFGGKSIYLRGEMNDWMATDASKVVKVADKLYMAKGTLKKEWAPYKFKFADSGWSCGTNFGYKSPSDGVAVLGGEAVPVNPCSKYEDMKFSPDADGVYEFYLNMAGDTPTVYVKKP
>NZ_CP007518.2|WP_025202179.1|2058561_2060709_+|adenosylcobalamin-dependent-ribonucleoside-diphosphate-reductase
MAKSHPVRESESGSRHIPLQETSLEIWDSKYRLKSKDGTLIDGAIDDTYQRVARALAAQEHDSDAWYEPFLWALCNGAIPAGRIISNAGAFEHKPATSTINCTVSGTIEDSMDDILGKVHEAGLTLKAGCGIGYDFSTLRPRGAFVSGAGAHTSGPLSFMDIYDKMCFTISSAGGRRGAQMGTMDIRHPDVIEFIQAKREDGRLRQFNLSLLITEEFVKAVKEDAPWQLIFPYTAREVGQDGIALDDPAQVVWADWPNKEGVVVNALGQVACKVYKTLPARRLWNVIMTSTYDYAEPGFILIDKVNQMNNNWFCEEIRATNPCGEQPLPPYGACLLGSINLTRFVRDPFTEQAAFDWPAFRKVVAIFTRMLDNVVEINQLPLAKQREEIISKRRHGMGFLGLGSTLTMLRIRYGSAAAIAFTEQVSQELAMTGWRESLALAKEKGPAPIMEQEFEVTGKLLRLRPEMAADGIKPGDKVKGKVLHARYSRYMQKVAEVEPALVAELAEVGGRFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYSRNVIKPGKKSKESVDVYSYELLAYRELVNPAAMPYAEDEVTRLPDYFITADDITPAQHVDIQAAAQRWIDSSISKTANVPTDFPFERFKDIYLYASDSGLKGCTTFRFNPATFQGVLVKEQDLEKTLYEFTLEDGSVVTAKGNEEIEYDGELHTAANLYDALKEGYYGKF
>NZ_CP007518.2|WP_010634984.1|2060719_2061403_+|ribonucleotide-reductase-system
MVKKIDGKIVAYQVKTRDEPQAEPAQQDAVVQMHETVLRPERLMGTTYKLKTPEHVSEHSLFITINDIVLNEGTVHETRRPFEIFINSKSLEHYQWIVALTRIISAVFRKGGDVTFLVEELRSVFDPKGGYWNKGKYVPSLIAEIGNVIETHLTEIGMLKVAGLDEHQQAFLAGKQAEIQAAQEADEQQAGSGFPPGAALCYKCHSKALVQKDGCMTCLNCGDSKCS
>NZ_CP007518.2|WP_010634983.1|2061589_2062960_+|PhoH-family-protein
MDNTDRKLFILDTNVLLHEPLAIYSFKEHDVLIPMTVLEELDNIKDRHKDVSRDARIAIRALEDVFRDATPEQIVQGVALAGEASGHISIFSDHHLPQDAEVFTDKEADNRIINAALYLQKHELKRQVVLVTKDINMRLKAKGAGFAHVEDYRSDQLIDDIRLLAKGFQTVPGSFWERVGECDSETHGRDTVHVIDAKLLEGVHVNQYLIDEENFFAARVLSHDNQKIRIKDLGRERLMSRKAWGVHPKNVYQGMALDALLDPHIDLVILTGPAGCGKTLLAMAAALELVIEKGIYEKVIVTRNTPEIAESIGFLPGTEEEKMMPWLAAVTDTLEVLHKQDENMSGSLSYIMEKANIQFKSVNFMRGRSIQNTFVLLDECQNLTASQIKTIITRCGEGTKIVCSGNLAQIDSNYLSPVTSGLTYIVERFKDFDGSANIFLNGVVRSKLASFAEENL
>NZ_CP007518.2|WP_010634982.1|2063028_2063736_-|thiamine-ABC-transporter-ATP-binding-protein
MLNIDTLVTSYPDWRVSFSATLPKGEITALIGPSGAGKSTLLGMIAGFVPIESGTLSFDGEDLLPLGPAARPVTTLFQDHNLFLHLSVFDNIAIGLHPGLRLNAAQRAQVKDAANRVGLGEMLTRLPEQLSGGQQQRVGLARALVRGKPLLLLDEPFSALDPALRREMLAEVARLACEQGITVLMVSHNPEDAQLIADQVLFIDEGRIALQGKPDILQNSAHPGLLRYLGRTKEQ
>NZ_CP007518.2|WP_010634981.1|2063808_2065431_-|thiamine/thiamine-pyrophosphate-ABC-transporter,-permease-protein
MSRLFVKPGARLLWWLPGSAATVLILLLSLGPLAALLWQAGGLAPRTLLADPYLRHVLGFSLWQALLSTLLSLGLAIPVARALARRRFPGRTLLIKLFGLSLVLPVIIAVFGIVAVHGKQGWLPQLLHGFGLAPGNYLYGLFGILLAHVFFNMPLAARLLLQSLESIPESSWRLASQLGMRSSHIFRLLEWPLIRAQLPGLASLIFMLCFTSFATVLALGGGPKSTTLEVAVYQALRFDFDLATAGGLALVQLILTAALLMLQHKLQSSPASRITSHRPCLRPDRHQPGSALVDALALAIGLAVFLPPLLAIVVAGLNPGLPDALTSGKLWLASGQSLLIALAAGSLATLLGSALLLTSRHLRVREHKRRAAALWETSGSVILMIPAVVLSTGLFILCMPFADVFALGPWLVVLVNALMALPYVLRTLSAPMQLVVRQYDRLADSLGVHGLHRLRLVEWPLLRRPLGQAAALAMILSLGDLGAIAMFGSQELTTLPWLLYQQLGSYRLTEAAATALLLLTLCFSLFWLVERGLGGKHADH
>NZ_CP007518.2|WP_010634980.1|2065427_2066408_-|thiamine-ABC-transporter-substrate-binding-subunit
MKTLLLVATGLLSAQAFAADTLTVYTYSSFTAEWGPGPKIKQAFEKECGCTLNLVPLEDGVAILNRLRLEGKHSKADLVLGLDDALVSEAKQSGLFAPHATKLDGLKVPGGWQDDTFVPYDYGYFAFVYDKEKLKQPPKSLKELVARPDLKIIYQDPRTSTPGQGLMLWMKSVYGDQAPAAWAQLAKKTVTVTKGWSEAYGMFLDGEADMVLSYTSSPAYHLIAEHKPQYQAAAFAEGHYRQVEVAAKLKSAKQEKLADQFLQFMISPAFQNGMATGNWMYPVIDTPLPKGFEQMITVAKPLAFSSDEVAANRKGWIREWLQAVTQ
>NZ_CP007518.2|WP_005304376.1|2066642_2066933_+|PilZ-domain-containing-protein
MITSTKERRAFQRMIINAPVTIFQQQQVLEGVCRDLSANGMGISVPEHQLDTTQPIRVSLATNNNLLPPFEAQARIIRVLEEEDGLLLAIEFQSLA
>NZ_CP007518.2|WP_010634979.1|2067022_2067952_-|transglutaminase-domain-containing-protein
MKMTLALPLLCGLWLALPVCAGQTYFNSSGGQLNVGWQDKDGKVQQLTYRLEAGKLPPLIAYRSARMQEDVLQSLLQQGVAEFPAVQFSLSRPEMELRLKGRQPEQVAKAMSWLTQQRDKQEAAWLKLHYFQPFTAPDGAAAIKQDHVRIALESRSELAPLAEQLKQQGSTETEARQKTTAQILDFVQAIPYQLLDSQSGRQGKGFLSPRQVLEQNQGDCDSKVTLMAAMLAQLFPELKQAMVFVPGHALLGVALPAKPGEATLSWEGETYLLMEPTGPAQLAMGQLAPTSKTFIDSKQLSVQPVRADK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_4

2604222-2604492

Orphan

Consensus_repeat	Method
TNCTGCTGGGNGGNGCCAACGTGCTGACNCA	CRT

4 spacers

The CRISPR arrays of NZ_CP007518_4

>merge|NZ_CP007518|4|2604222-2604492|CRT
GACTGCTGGGTGGGGCCAACGTGTTGACTCACATCACCCAGGGGGACGAGGCTGCCGATACCCGCGCCGTGCTGCTGGGGGGCGCCAACGTGCTGACCAAGAAGGGCAACGGCAAGGTACAGGCCATTCTGGGAGGCGGCGCCAACGTGCTGACCCAGATTGGTCAGGGAGATACCCAGGCGCTGCTGCTGGGGGCTGCCAACGTGCTGACTCGGGTCGGCGATGGCGATCTCTCCGCGGTGATGCTGGGGGGCGCCAACGTGCTGACCCA

>NZ_CP007518|4|1|2604222-2604492|CRT
GACTGCTGGGTGGGGCCAACGTGTTGACTCA	CATCACCCAGGGGGACGAGGCTGCCGATACCCGCGCCG
TGCTGCTGGGGGGCGCCAACGTGCTGACCAA	GAAGGGCAACGGCAAGGTACAGGCCA
TTCTGGGAGGCGGCGCCAACGTGCTGACCCA	GATTGGTCAGGGAGATACCCAGGCGC
TGCTGCTGGGGGCTGCCAACGTGCTGACTCG	GGTCGGCGATGGCGATCTCTCCGCGG
TGATGCTGGGGGGCGCCAACGTGCTGACCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_025201990.1\|2623956_2624382_+\|glutaredoxin-dependent-arsenate-reductase	unknown	unknown	gnl\|CDD\|182200
NZ_CP007518.2\|WP_025202003.1\|2588936_2590376_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP007518.2\|WP_041207260.1\|2597370_2598735_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP007518.2\|WP_025202002.1\|2591743_2592712_+\|glucokinase	unknown	unknown	gnl\|CDD\|234716
NZ_CP007518.2\|WP_039215309.1\|2590539_2591397_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183082
NZ_CP007518.2\|WP_025201996.1\|2617850_2618942_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225971
NZ_CP007518.2\|WP_081050847.1\|2601126_2601525_+\|peptide-chain-release-factor-1	unknown	unknown	unknown
NZ_CP007518.2\|WP_025202001.1\|2595208_2597374_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|273831
NZ_CP007518.2\|WP_025201994.1\|2619682_2619991_-\|DUF134-domain-containing-protein	unknown	unknown	gnl\|CDD\|224261
NZ_CP007518.2\|WP_049866839.1\|2598731_2600819_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|273831
NZ_CP007518.2\|WP_025201991.1\|2622829_2623894_+\|ACR3-family-arsenite-efflux-transporter	unknown	unknown	gnl\|CDD\|213563
NZ_CP007518.2\|WP_010634637.1\|2616251_2617580_-\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NZ_CP007518.2\|WP_025201993.1\|2620556_2620925_+\|arsenite-efflux-transporter-metallochaperone-ArsD	unknown	unknown	gnl\|CDD\|377741
NZ_CP007518.2\|WP_005298736.1\|2593024_2594407_-\|GHKL-domain-containing-protein	unknown	unknown	gnl\|CDD\|182754
NZ_CP007518.2\|WP_005298747.1\|2620183_2620552_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378968
NZ_CP007518.2\|WP_025201989.1\|2624494_2625271_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211400
NZ_CP007518.2\|WP_010634645.1\|2594406_2595081_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|182755
NZ_CP007518.2\|WP_025201995.1\|2619155_2619686_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376832
NZ_CP007518.2\|WP_025201992.1\|2620964_2622728_+\|arsenical-pump-driving-ATPase	unknown	unknown	gnl\|CDD\|275109
NZ_CP007518.2\|WP_162492516.1\|2601545_2602007_+\|RTX-toxin-activating-lysine-acyltransferase-RtxC	unknown	unknown	gnl\|CDD\|367187

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_025201990.1\|2623956_2624382_+\|glutaredoxin-dependent-arsenate-reductase	gnl\|CDD\|182200	PRK10026, PRK10026, arsenate reductase (glutaredoxin).	1.89891e-90
NZ_CP007518.2\|WP_025202003.1\|2588936_2590376_-\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP007518.2\|WP_041207260.1\|2597370_2598735_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.5834e-122
NZ_CP007518.2\|WP_025202002.1\|2591743_2592712_+\|glucokinase	gnl\|CDD\|234716	PRK00292, glk, glucokinase; Provisional.	0
NZ_CP007518.2\|WP_039215309.1\|2590539_2591397_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|183082	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional.	0
NZ_CP007518.2\|WP_025201996.1\|2617850_2618942_+\|HD-domain-containing-protein	gnl\|CDD\|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	7.64924e-62
NZ_CP007518.2\|WP_025202001.1\|2595208_2597374_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|273831	TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP007518.2\|WP_025201994.1\|2619682_2619991_-\|DUF134-domain-containing-protein	gnl\|CDD\|224261	COG1342, COG1342, Predicted DNA-binding proteins [General function prediction only].	1.3543e-35
NZ_CP007518.2\|WP_049866839.1\|2598731_2600819_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|273831	TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP007518.2\|WP_025201991.1\|2622829_2623894_+\|ACR3-family-arsenite-efflux-transporter	gnl\|CDD\|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	1.79079e-128
NZ_CP007518.2\|WP_010634637.1\|2616251_2617580_-\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NZ_CP007518.2\|WP_025201993.1\|2620556_2620925_+\|arsenite-efflux-transporter-metallochaperone-ArsD	gnl\|CDD\|377741	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD. This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins. ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs.	7.48939e-59
NZ_CP007518.2\|WP_005298736.1\|2593024_2594407_-\|GHKL-domain-containing-protein	gnl\|CDD\|182754	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ.	7.3792e-69
NZ_CP007518.2\|WP_005298747.1\|2620183_2620552_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	4.31162e-12
NZ_CP007518.2\|WP_025201989.1\|2624494_2625271_+\|hypothetical-protein	gnl\|CDD\|211400	cd11524, SYLF, The SYLF domain (also called DUF500), a novel lipid-binding module. The SYLF domain is named after SH3YL1, Ysc84p/Lsb4p, Lsb3p, and plant FYVE, which are proteins that contain it. It is also called DUF500 and is highly conserved from bacteria to mammals. Some members, such as SH3YL1, Ysc84p, and Lsb3p, which represent the best characterized members of the family, also contain an SH3 domain, while family members from plants and stramenopiles also contain a FYVE zinc finger domain. Other members only contain a stand-alone SYLF domain. The SYLF domain of SH3YL1 binds phosphoinositides with high affinity, while the N-terminal SYLF domains of both Ysc84p and Lsb3p have been shown to bind and bundle actin filaments, as well as bind liposomes with high affinity.	1.83991e-08
NZ_CP007518.2\|WP_010634645.1\|2594406_2595081_-\|response-regulator-transcription-factor	gnl\|CDD\|182755	PRK10816, PRK10816, two-component system response regulator PhoP.	3.94292e-81
NZ_CP007518.2\|WP_025201995.1\|2619155_2619686_-\|hypothetical-protein	gnl\|CDD\|376832	pfam02579, Nitro_FeMo-Co, Dinitrogenase iron-molybdenum cofactor. This family contains several NIF (B, Y and X) proteins which are iron-molybdenum cofactors (FeMo-co) in the dinitrogenase enzyme which catalyzes the reduction of dinitrogen to ammonium. Dinitrogenase is a hetero-tetrameric (alpha(2)beta(2)) enzyme which contains the iron-molybdenum cofactor (FeMo-co) at its active site.	3.21309e-08
NZ_CP007518.2\|WP_025201992.1\|2620964_2622728_+\|arsenical-pump-driving-ATPase	gnl\|CDD\|275109	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase. The broader family (TIGR00345) to which the current family belongs consists of transport-energizing ATPases, including to TRC40/GET3 family involved in post-translational insertion of protein C-terminal transmembrane anchors into membranes from the cyotosolic face. This family, however, is restricted to ATPases that energize pumps that export arsenite (or antimonite).	0
NZ_CP007518.2\|WP_162492516.1\|2601545_2602007_+\|RTX-toxin-activating-lysine-acyltransferase-RtxC	gnl\|CDD\|367187	pfam02794, HlyC, RTX toxin acyltransferase family. Members of this family are enzymes EC:2.3.1.-. involved in fatty acylation of the protoxins (HlyA) at lysine residues, thereby converting them to the active toxin. Acyl-acyl carrier protein (ACP) is the essential acyl donor. This family show a number of conserved residues that are possible candidates for participation in acyl transfer. Site-directed mutagenesis of the single conserved histidine residue in Escherichia coli HlyC resulted in complete inactivation of the enzyme.	1.07778e-54

>NZ_CP007518.2|WP_162492516.1|2601545_2602007_+|RTX-toxin-activating-lysine-acyltransferase-RtxC
MRLVLQPTEPNWQQKQHMLGGVMLLSQHSSLHRRYSVAEWQQRILPAFELNQFCYYEDSHGRPVAFCNWAFVSLSIRNTLLAAERELIREDWQSGDHIFIPEMIAPYGHARAVVSDLRRRIFLPWKGQRVCTVRGHVHAEHGQCVRRVQWFSI
>NZ_CP007518.2|WP_081050847.1|2601126_2601525_+|peptide-chain-release-factor-1
MLIYLWRDFCFLFYLIFIDNGIYMTEQFVQTVSSVNYNKGIFSLYFVGQDPLKMAQGVMAESDNELALKQTVHMPAAGFMYMVSMIKNMLEDPRMATEFDKLIAAGLIPAAPADAQESAPAATAQAAPRKKK
>NZ_CP007518.2|WP_049866839.1|2598731_2600819_-|type-I-secretion-system-permease/ATPase
MTAHDESVLACLKIITGLLGCPPKDIDITPDEPFDIIIDRLQQQTDSRIRQRHIAPRKLAKQTLPLVLLSDSGAPFVLAQRQGEQALILDPAVGNPQIIDQQELLARWNGRVYQVRRQQSRFDIRWFIPAFLQQKRLLGEILLFSLVLQLLALISPLFFQVVMDKVLVHQAWSTLDVLVLGLLITALVEVCLRGLREYQYAHTANRIDIQLGLRMVQHLFALPLLYFKSRQVGAIVTRVQELNTIREFLTGTMFTLTVDVLFMFVFLAVMASLSGMLTLVILLSIPAYVLIAWWITPRMQQAVEQQFGHAAANTAFLNETVAGAETLKSLALEPRFVRRWDEQTSQMVTAGYRVQQLNNASQHGVMWLQKLVSAGVLWLGASEVISLQLTIGQLIAFNMMAGHVAQPLSRLVELWGQFIQTRIAVDKLGDMLNLPPEHQRDGAGQVSAGAIQLERVRFRYQPDTPLIIDDLSLTIAPGETLGVVGGSGSGKSTLARLLLRLYQPEQGEIFIDGQPIRQLPLHHLRQQMGVVLQENHLFNKSVRDNIAQSVPHASLDQIIRAATLAGAHDFILRLPLGYDTVLAEGGSSLSGGQRQRLAIARTLLADPRLLIFDEATSALDDESQALIQRNMRQIACGRTVITIAHRLSTVRQCDRIIVLQRGKIVEQGDHASLLARGEHYARLWRLQQDLHEETP
>NZ_CP007518.2|WP_041207260.1|2597370_2598735_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MNLRTWLARWRQPRPPRQADTHYGFLPAHLALAETPPSPFARITALTLSAGVLLTLLWACWGELDIQATASGRLLVLGRSQLIQSYEQARVVTIHVEDGQAVAADAPLLTLNTLGVSQDLSRLRQQQAFQYQTLIRYQALYREQTPDQHPDYARLTPEQQQALLENYQSELHEFHSTLSNLQAELGVNQANQAARRGDMASLTTLLANIRPRLQARQTLSQSQAISRVEYLEQEKELLETQRQLAQQRAELEVLQSQQQSLQERLAGFKAQKQREWIEKRQQARLQLTAIEQELAKLREREHLEVIRAPVAGTVQQLAIHTQGAVVQPAQQLLVIVPNEGVQLAEVKILNKDIGFVHEGQAVSIKVDAFPYTRYGTIDGELVSVSRDATADEQLGLVFAARVKLSQGEMLIDNQPVRLTPGMSVVAEIKTDRRRVIDYLLSPIREYQAEALRER
>NZ_CP007518.2|WP_025202001.1|2595208_2597374_-|type-I-secretion-system-permease/ATPase
MKMDQTHAADRTPVANGALAALTHAAHQLMLTADADQLAHALGCDLAPPDLTVREAAAHLGLRSALSHGPGCPLAALPLPALLKRDDRWYTITAITPEGWQLFDPASGTSSLQPLPSPALAAQWHFLLLAQQDLTPAEVKFGLGWFSPAVLRQQKQLRDVFCFAILLQLIALASPLLFENIIDKVLVGRSLGSLHVLALAMVALACAEPLYGFLRGQVFGHLANQVNAELSGMLYRHLVGLPIGYFKTRQTGQIIARVKEMAQIRQFLTGSTLMLVLDLLFILLFVGVMFHYAPRLTACVLGSLLIYFLLWLLIGPLVRKKVEAEYQADADATSFLTEAVTGIETIKTTATERRFYQEWQRLLARQLRRGFQAKKVGLAAGQGIDLVQKLTAALLLWLGVGEVLNGRMSPGELVAFNMLAGHVTQPVLRLAQVWQDFQHTLIALRRVGDILDEAPEHGNHGLASVPALQGAIEFRHIRFRYQPDAPEVLANLSFAIEPGQFIGITGPSGCGKSTLTRLLQRLYVPQHGQVLVDNMDLAIADPVSLRRNMSVVLQESVLFSGTIADNIRICRPDATQAELEQAAQLAGALTFIRELPQGFEQQVGEKGARLSGGQRQRIALARALLVNPRILLLDEATSALDYESEAAIMANMAAIRRGRTLISIAHRLNTLREADRILVMEAGQIVESGSHHELLAREGLYARLWRQQTSDDELPAMARTG
>NZ_CP007518.2|WP_010634645.1|2594406_2595081_-|response-regulator-transcription-factor
MKILLVEDDKLLNHHLTTLLTEAQNQVHSTESAQVALHYAADYPIDVAIIDLGLPDMDGLQLIRQLREQQIPFPIIVLTARGNWQDKVEGLEAGADDYLVKPFQKDELLARLNALVRRSAGFISPRVKAGDYELDLSRKELTIAGTPVVLTSFEYLILEYLMRNARQVVSKQQLLDQLYGDGEGDPNTIEVMVSRLRKKLDPEGLIQPISTIRRQGYIFNLSCS
>NZ_CP007518.2|WP_005298736.1|2593024_2594407_-|GHKL-domain-containing-protein
MGFRLPRPMRFIRRSLHIKLMLSAMLVIALIMSFSVYILYLGHTDEQAQKASTRMQENLSKLFSSKMPDAQASTDLGRLTPDAIDPNLDTLICRADGQLSWSSLHMPEVIQVKDSICDDLMKYLGGLDQDYFFKRLTIKNGESYFIYSLRFLRNHGDGPTTYYVVMVDSAKRYLLQTRDYLYQCIRQALLAYALLGALLLLTSFWSLGSLRTMARQIDEIRAGKREALSNDYERELTPLTESVNQLLENERQQTQRYQHALNDLAHSLKTRLALIQMTAQEVKLGRDIHDNINEQILTMDQIIQYQLRRAVTGRKRLASKGTEPVPLIEKLLASLAKVYRHKKLQTRFKFDDDVFFAGEQGDLMELMGNLLDNAFKFAISEIKVTVSRRLDRLRIEIEDDGPGIDPGKSQQIFQRGVRADSSPGQGIGLAVVTEIVHSYGGQIMVDESPLGGARFTLDLP
>NZ_CP007518.2|WP_025202002.1|2591743_2592712_+|glucokinase
MQHTHALVGDVGGTNARLALCELATGTISRAKTYSGLAHPSLEAVVRLYLDEHKVQVGEACIAIACPINGDWVAMTNHSWEFSISEMQASLGLTRLQVINDFTAVSMAVPVLDAADCIQLGGSAPVAGKPIAIYGAGTGLGVAHLVQAGEQWLSLPGEGGHVDFAANSEEEDAVLQVMRAELGHVSAERLLSGPGLVNIYRGLVKSDGREPQAFEPKDITERALASECLDCRRTLSLFCVLMGRFAGNLALNMGTFGGVYIAGGIVPRFQEFFIGSGFRVAFEDKGRFKSYLKDIPVFLITHEGPGLLGAGAYLRQSLGIKL
>NZ_CP007518.2|WP_039215309.1|2590539_2591397_-|MurR/RpiR-family-transcriptional-regulator
MMNTLDKITNNLESFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTKGFPDFKLHLAQSLANGTPYVNRHVEAEDGPDTYTAKIFESTMACLDAAKNSLDISAINRCVDILTQSKKISFFGLGASSAVARDAQNKFFRFNIPVVSFDDIVMMRMSCINSSEGDVVVLISHTGRTKALVEIAALARENDATVIGMTAKDSPLARECNLVLSMDVPEDTDVYMPMASRIAQLALVDVLATGFTLRRGMKFRENLKKVKEGLRESRFDTPHSS
>NZ_CP007518.2|WP_025202003.1|2588936_2590376_-|pyruvate-kinase
MPRRTKIVTTLGPATDREGILEGIIRAGADMVRMNFSHGTAEDHILRANQVRDIAAKLGRHVAIMGDLQGPKIRVSTFKDGKIYLAIGDKFILDAALGKGEGSQEQVGIDYKSLPNDVVPGDILLLDDGRVQLKVEQVEGTRIHTTVTVAGPLSNNKGINKKGGGLSAPALTEKDKEDIKTAARMNVDYLAVSFPRCGDDLRYARELAREAGSNAKIVAKVERAETVATDEAMEDIILGSDAVMVARGDLGVEIGDPELVGVQKKLIRHSRRLNRVVITATQMMESMINAPLPTRAEVMDVANAVLDGTDAVMLSAETAAGQFPIETVTSMASVCVGAEKHPSLNVSNHRMSYTFTSVEEAVAMSTMYAANHLEGVKAIVALTESGTTPLLMSRISSGLPIFALSPHNKTLAWTNLYRGVTPVLFDGDETKPVYEVCRDALDVLKAKGLLQSGDMVLLTHGDKMETVGSTNTCKVMMVE
>NZ_CP007518.2|WP_010634637.1|2616251_2617580_-|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAVQESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVEKPTHNPFTSLVPAQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLGMWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPAEVQEERFQRFMELQQQVSIRKLARKVGKEMLVLIDEVDEEGATGRSAADAPEIDGLVYLNGETGLKPGDMVKVRIDEADEYDLWASLID
>NZ_CP007518.2|WP_025201996.1|2617850_2618942_+|HD-domain-containing-protein
MESSFGEKVQNVHATLRQRFDKLSRVAVAIYDQQTDKLKTFAHSTEGGSPLLQYEVKLSEVPSLRYLAERQQPRVLDTLGSLQGSPTEHSRKLLAAGYESSYTEPLLFNSRLFGFLFCDAREPGYFDAAIRGELAAYAQILAAIIAVEFFSIQTLNGALTTAREFSRYRDEETANHLHRMSAYSRLIACEVAAHYPLNDEEVEFIHLFSELHDIGKIAVPDAILLKPGKLTSEEYAVMKIHPLKGREMIALMIKEFGLDGIHHTDMLKNIIAYHHERFDGQGYPEGLAGQAIPLEARIVTVADVFDALTSERPYKQAWPFETAFEYLKTHAGSQFDPVCVAAALRSKEAFRAIHQQYRDPAIT
>NZ_CP007518.2|WP_025201995.1|2619155_2619686_-|hypothetical-protein
MNQNVNTTAVPGNHAILLSRGRPSAHVSRAEQLQIVSPAGEVLATMSNPANSEGCRGKQALLATLQAHAVTQVLVRNIGEHMLGRLLDAGISVWQYRSAHLDLSAAHFQPLTDASQGSPSRRKASKASKAGGLIKGSRPSCNGRKGKQIGRESGCHQAEQCGCNHQQGDEPCHTCC
>NZ_CP007518.2|WP_025201994.1|2619682_2619991_-|DUF134-domain-containing-protein
MPRPKIARRICGRPANSCFKPNGVPMHELEQVALAADEFEALRLVDLEGMQQQEAARLMGVSRQTLANTLKRARYKVVECLSLGKALLMQPDVPQPSGETAQ
>NZ_CP007518.2|WP_005298747.1|2620183_2620552_+|helix-turn-helix-transcriptional-regulator
MNKETATKVFESLASGIRLDVWRLLVKAGLDGRVAGELAGELDIAPNTLSFHLKAMLNAGLLSVEQEGRFLRYRANIPLMLDLIGYLTEECCAGHPEACGMMRAESTCSPHVLPAQPCCHKE
>NZ_CP007518.2|WP_025201993.1|2620556_2620925_+|arsenite-efflux-transporter-metallochaperone-ArsD
MSVIQIFDPALCCASGVCGTEVDQSLVTFAADLAWAREQGVAIERFNLAQQPLQFAETPAVSAFLTHAGEEGLPLVLVEGQVVLTGRYPSRGELARYAGLPAPQATIKGIVKAACRPGSGCC
>NZ_CP007518.2|WP_025201992.1|2620964_2622728_+|arsenical-pump-driving-ATPase
MYHFLTNPPPFLFFTGKGGVGKTSLACASAVALCDAGKRVLLVSTDPASNVGQVFATDIGNRITAIAAVPGLSALEIDPPAAAKAYRERIVGPVRGKLPERVVRSIEEQLSGACTTEIAAFDEFTALLTDPALRSEYDHILFDTAPTGHTIRLLQLPGAWSEFLAQGKGDASCLGPLAGLEKQRSQYAEAVAALADGARTRLVLVARAQHSTLREVARTHEELAAIGLANQQLVINGLFPAAAIAGDTLAQAIWRREQQALADMPQGIKGLARDQVPLLATNLVGLDSLRQLLQPQDAGEQAPLATSAHLPVQPELSSLVDELAADGHGLIMLMGKGGVGKTTLAAAVAVELASRGLPVHLTTSDPAAHLGETLAGSLPHLEVSRIDPRAETERYRAQVLASKGAALDEQGRALLEEDLRSPCTEEIAVFQAFSRIIREAGKRFVVMDTAPTGHTLLLLDATGAYHREIARQMGGKGLHFTTPMMQLQDPKQTKVLIVTLPEPTPVQEAANLQADLRRAGIEPWAWLINHSLQQAAVRSPLLRLRAERQLPHVEAVERQHASRYAVVPLLAEEPVGADALRSLCQHH
>NZ_CP007518.2|WP_025201991.1|2622829_2623894_+|ACR3-family-arsenite-efflux-transporter
MSATCDAKSQPAIGFFERYLTAWVALCILVGIGLGQGLPELFKAIGAMEVAKVNLPVGLLIWVMIIPMLLKIDFGALHQVKGHLKGIGVTLFINWLVKPFSMAFLGWLFIRVLFADWLPADQLDSYVAGLILLAAAPCTAMVFVWSRLTNGDPYFTLSQVAVNDLIMVFAFAPLVALLLGVSSIVVPWDTLLTSVVLYIVIPVIIAQLLRKALLQKGQAHFDSVMTRIQPWSVAALLLTLVLLFAFQGNAIMEQPLVIALLAVPILIQVLFNSGLAYWLNRKVGEKHSVACPSALIGASNFFELAVAAAISLFGFHSGAALATVVGVLIEVPVMLLVVRIVNASKPWYEAGLSR
>NZ_CP007518.2|WP_025201990.1|2623956_2624382_+|glutaredoxin-dependent-arsenate-reductase
MSAITIYHNPECGTSRNTLELIRNSGVEPTVIHYLETPPSRDELVALIAAMGMPVRELLRKNVPPYEALGLAEDRFSDDALIDAMLAHPILINRPIVVTPLGTRLCRPSELVLDILPDQQKGAFAKEDGEQVVDEHGKRLR
>NZ_CP007518.2|WP_025201989.1|2624494_2625271_+|hypothetical-protein
MKIRFLVIATALALTSAPGLADWAKVKAAATELGNAVSDTSKEAWQSVTDFSKATWASVSQWGSEALNTAGAWTDKSVATGKEWLAVADKKLDEMLEPKTADEARLALNTMADTALVRLFNEQPSAKLLFDKAYGYAVFDSRKFSLMLHTNQGAGVAVNRATGKHTYMKMFGAGLAAGLGGKFYQQVILFEDKARFDTFVSQGWEATSEVGAVAGKESAELTAKYNGGMAIYQIGEKGLLLDANISGSKYWVDKDLTR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_5

4011049-4011140

Orphan

Consensus_repeat	Method
GCTGCCGACGCAGATCCCAAGAAGGC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP007518_5

>merge|NZ_CP007518|5|4011049-4011140|CRISPRCasFinder
GCTGCCGACGCAGATCCCAAGAAGGCAGCCATTGCCGCCGCCCCTGCTACCGCCCCGCAACCTGATGCTGCCGACGCGGATCCCAAGAAGGC

>NZ_CP007518|5|4|4011049-4011140|CRISPRCasFinder
GCTGCCGACGCAGATCCCAAGAAGGC	AGCCATTGCCGCCGCCCCTGCTACCGCCCCGCAACCTGAT
GCTGCCGACGCGGATCCCAAGAAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_005302251.1\|4003726_4004920_-\|trans-2-enoyl-CoA-reductase-family-protein	unknown	unknown	gnl\|CDD\|237460
NZ_CP007518.2\|WP_025201514.1\|4006640_4007537_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP007518.2\|WP_024941106.1\|4016147_4018121_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP007518.2\|WP_005302243.1\|3998679_3999894_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_CP007518.2\|WP_025201516.1\|4002087_4003563_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP007518.2\|WP_019840420.1\|4000023_4001655_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP007518.2\|WP_017764205.1\|4014721_4015135_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|272886
NZ_CP007518.2\|WP_010633633.1\|4012561_4013194_+\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP007518.2\|WP_005302298.1\|4020913_4022809_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|236941
NZ_CP007518.2\|WP_017778817.1\|4013983_4014625_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP007518.2\|WP_010633639.1\|3998086_3998299_-\|DUF1653-domain-containing-protein	unknown	unknown	gnl\|CDD\|377930
NZ_CP007518.2\|WP_025201515.1\|4005059_4005248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_005302262.1\|4007649_4008231_+\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NZ_CP007518.2\|WP_010633627.1\|4019199_4020522_+\|Na+/H+-antiporter-family-protein	unknown	unknown	gnl\|CDD\|224967
NZ_CP007518.2\|WP_010633628.1\|4018269_4018929_+\|ribonuclease-T	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|179951
NZ_CP007518.2\|WP_005302265.1\|4008235_4008799_+\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP007518.2\|WP_010633630.1\|4015203_4016037_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|375819
NZ_CP007518.2\|WP_017764207.1\|4013210_4013969_+\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP007518.2\|WP_005302254.1\|4005246_4006545_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP007518.2\|WP_025201512.1\|4011396_4012449_+\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_005302251.1\|4003726_4004920_-\|trans-2-enoyl-CoA-reductase-family-protein	gnl\|CDD\|237460	PRK13656, PRK13656, enoyl-[acyl-carrier-protein] reductase FabV.	0
NZ_CP007518.2\|WP_025201514.1\|4006640_4007537_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.07979e-18
NZ_CP007518.2\|WP_024941106.1\|4016147_4018121_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.88385e-59
NZ_CP007518.2\|WP_005302243.1\|3998679_3999894_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_CP007518.2\|WP_025201516.1\|4002087_4003563_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	2.2432e-155
NZ_CP007518.2\|WP_019840420.1\|4000023_4001655_-\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	2.23093e-23
NZ_CP007518.2\|WP_017764205.1\|4014721_4015135_+\|lactoylglutathione-lyase	gnl\|CDD\|272886	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase. Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice. [Central intermediary metabolism, Amino sugars, Energy metabolism, Other].	5.35161e-80
NZ_CP007518.2\|WP_010633633.1\|4012561_4013194_+\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	1.49006e-110
NZ_CP007518.2\|WP_005302298.1\|4020913_4022809_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|236941	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional.	0
NZ_CP007518.2\|WP_017778817.1\|4013983_4014625_+\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	5.90512e-150
NZ_CP007518.2\|WP_010633639.1\|3998086_3998299_-\|DUF1653-domain-containing-protein	gnl\|CDD\|377930	pfam07866, DUF1653, Protein of unknown function (DUF1653). This is a family of hypothetical bacterial proteins of unknown function.	7.94232e-26
NZ_CP007518.2\|WP_005302262.1\|4007649_4008231_+\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	3.50094e-116
NZ_CP007518.2\|WP_010633627.1\|4019199_4020522_+\|Na+/H+-antiporter-family-protein	gnl\|CDD\|224967	COG2056, COG2056, Predicted permease [General function prediction only].	0
NZ_CP007518.2\|WP_010633628.1\|4018269_4018929_+\|ribonuclease-T	gnl\|CDD\|179951	PRK05168, PRK05168, ribonuclease T; Provisional.	2.83073e-162
NZ_CP007518.2\|WP_005302265.1\|4008235_4008799_+\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	2.9063e-125
NZ_CP007518.2\|WP_010633630.1\|4015203_4016037_-\|OmpA-family-protein	gnl\|CDD\|375819	pfam18393, MotY_N, MotY N-terminal domain. The bacterial flagellar motor is a rotary motor complex composed of various proteins. MotX and MotY are essential for the Na+-driven flagellar motor motility of Vibrio, Shewanella and Aeromonas species. MotY is main component for T-ring formation and absence of MotY completely disrupt the T-ring formation. This is the N-terminal domain of MotY which is shown to be essential for motility and responsible for the interaction with both MotX and the basal body. Functional analysis suggests that MotY-N connects the basal body to MotX and that the PomA/PomB complex associates with MotX to form the functional stator complex around the rotor. MotY-N alone does not associate strongly with the basal body, but the partial T-ring structure made of the MotY-N/MotX complex is sufficient to allow at least a few PomA/PomB stator complexes to be incorporated into the motor.	3.08009e-70
NZ_CP007518.2\|WP_017764207.1\|4013210_4013969_+\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.4425e-132
NZ_CP007518.2\|WP_005302254.1\|4005246_4006545_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.57365e-41
NZ_CP007518.2\|WP_025201512.1\|4011396_4012449_+\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0

>NZ_CP007518.2|WP_005302265.1|4008235_4008799_+|electron-transport-complex-subunit-RsxB
MIHILFAVLVLALLALAFGIILGFAAVKFHVEADPIVDQLDALLPQTQCGQCGYPGCKPYAEALANGDQINKCVPGGDATMRKIADLMGVEPQPLGGAEAAVPVKKVAFIHEDQCIGCTKCIQACPVDAIVGATKAMHTVIKDECTGCDLCVDPCPTDCIEMIPVPTTVDNWKWDLNNVTIPVKIVE
>NZ_CP007518.2|WP_005302262.1|4007649_4008231_+|electron-transport-complex-subunit-RsxA
MTEYLLLLVGTVLINNFVLVKFLGLCPFMGVSGKLETAIGMGLATTFVMTLASACSYLMEHYILIPLNIAYLRTLAFILVIAVVVQFTEMVIRKSSPTLYRLLGIFLPLITTNCAVLGVALLSINEHHNFIQSIIYGFGAATGFSLVLILFAAMRERLVAADVPTPFRGVSIAMITAGLMSLAFMGFTGLIKI
>NZ_CP007518.2|WP_025201514.1|4006640_4007537_-|DMT-family-transporter
MRPLPIFTLTLAMLLWSSSFIALKHVLGVWGFGQVLFMRMSVAALCWLCCYRYLGNFRYQPGDWRWLALMGALEPCLYFLLEVNALRYTSAGQAGMVCALLPLVVALVAFLLIGERVSRRQLLGFAVAIFGIALLGFGSGADEFAPNALLGNSLEMAAMFCAATYSVVFKKLCSRYSVLTLTALQAFVGTLFFAPFAFSEPWPADWAWQDMVVIVFLGACVTLGAYLLYNWSVTQVKVTLAAAYVNLIPVFTLLLAYLLLGETLNALQWVACGAVLLGIALGQLPARRKGAQAVTAEG
>NZ_CP007518.2|WP_005302254.1|4005246_4006545_+|methyl-accepting-chemotaxis-protein
MFWNRTGNHDKSEQAAKIAALGAFEQAIQSRLPYIEFTPEGVITFVNDRFLAIVGYGREEVIGKHHSSLCFPDDVNTREYEQLWQELRRGESRSGRFIRQAKSGKAVWLEASYFPILLDGKVSKVAKVASNVSEQQSTLERTQALLTALDKSLAVIDFQPDGTVITANQNFLHCFGYRLDEVVGQPHRMFCDEEFYQQNPNFWRDLGSGAIQSGLFMRRGRHGEKIWLEATYNPIFNHERKVVKIIKLASDISERVEKSISVREAAQKACAIAGETVSSAAKGREVIDKVLETSAHINSSVSEVTRQIENLNQQSRSIESIISTISSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLAARTSTSTGEIVSVIRLNSDITSRITQTVSVVSDKAMAGQAQADIIAGVIQEIIEDANSVSETVKGLSI
>NZ_CP007518.2|WP_025201515.1|4005059_4005248_-|hypothetical-protein
MAELLVKTPVRLFMTITDRLNTSTGSLAIALAIGGNCLFCRYLLFHAGERQQGGMGQVRLRA
>NZ_CP007518.2|WP_005302251.1|4003726_4004920_-|trans-2-enoyl-CoA-reductase-family-protein
MIIKPKVRGFICTTTHPVGCEANVRRQIAYTQAKGTIENGPKKVLVIGASTGYGLASRIAAAFGSGAATLGVFFEKAGSETKTGTAGWYNSAAFDKAAKEAGLYAKSVNGDAFSNECRAKVIELIKQDLGQIDLVVYSLASPVRKMPETGEVVRSALKPIGEVYTTTAIDTNKDQIITATVEPANEEEIQNTITVMGGQDWELWMAALRDAGVLADGAKSVAYSYIGTDLTWPIYWHGTLGRAKEDLDRAAAAIRGDLAAKGGTAHVAVLKSVVTQASSAIPVMPLYISMAFKIMKEKGIHEGCMEQVDRMMRTRLYGADLALDEQARIRMDDWELREDVQQTCRDLWPSITSENLSELTDYTGYKQEFLRLFGFGLDEVDYDADVNPDVQFDVVEL
>NZ_CP007518.2|WP_025201516.1|4002087_4003563_-|YfcC-family-protein
MTTPNDAPKKRQLPTVYTLLFIIIALMAALTWVLPAGKYNYVTAKSQQPVAAAAVADYSGDERLLPVPGSYTELPSQPQGVFDVLKAPIQGFHKAADVALFVLIIGGFLAVTMQSGALDAGVGAIVRAFAGRERLLIPVLIALFALGGSTFGMAEETVAFWALIVPVMMAAGFDRMVAAGIILLGSGVGVLASTVNPFATGIASGFAGIPIGEGIGLRVVQWLLLVIFASWFVMRYAKQVQQDKSRSVLADIAYDDEFSQMKSGNLAFSGKQKLTMLVFFGTFLLMIYAVVPWSDLGIDLLPTLGWWFDELSTLFFSASILIALINRMPESNYVATFLNGARDLIGVALVVAVARGIYVVMEHGVIIDTILHWAEGLVSGLSSSVFILMAYLVHIILSFFIPSTSGLATVSMPLMGPLADFSGISRDLVITAYQSASGWINLFAPTAAHLVAGLALARIPYDRFVRWVLPFIIGVALITMVVLVAGALLQG
>NZ_CP007518.2|WP_019840420.1|4000023_4001655_-|mechanosensitive-ion-channel
MGHRGIIRLAGMLLALLMVDSGWAAEPRLEPTEQEQAQTLTLFHEPIVMLQAKFGRLDGAARVRIVKERVRQLQPEDLTHPVTVVSSTRLGQEAREFRLNDKHLLVLLEKDLEWLDELTLDQAAERVRLRLENVRVKVLELHSNTYLLKAAGKTLLVTLLFLMVVQLLRRGLQRARRWFANNLLQQKGLIPHQWRQVLGNLEIRVIGVFTWLVILLLTYGWLTYVLGLFPHTRIWSDQLGSSLLELCSNILGGIIAAMPGLATVLVIFVLTKLFIRMLAVIFARIERGHFRVQGLHSETIGATRRLLSVVIWLFALTVAYPYLPGADSDAFKGVSVFFGLMVTLGSAGIMNHAMSGLVLIYSRALRPGDLVQIGEVEGVVTELSALSTKLVTRHDHEVTLPNAVVVGGKVTNLSRLASDKGIALLTKVTIGYDTPWRQVHAMLELAARRCQLINQEQAPLVRQLNLQDWYVEYELQVRMKEGLLPGPVRTELHGHIQDVFNEFGVQIMSPNFVAQPEQAVLVPREQWYQAPAVPPAEVATGEK
>NZ_CP007518.2|WP_005302243.1|3998679_3999894_+|pyridoxal-phosphate-dependent-aminotransferase
MFTIDKSHKLDDVCYDIRGPVHKEARRLEDEGHRIIKLNIGNPAPFGFEAPEEIIKDVILNMPQSQGYCDSKGLFSARKAVMQYYQQKGMRKVDIDDIYIGNGASELIVMAMQALLNNGDEMLVPSPDYPLWTAAVTLSGGHAVHYRCDEGADWYPDLDDIRARITPRTRGLVLINPNNPTGAVYGSEFLLEVIEIARQHNLIIFADEIYDKILYDDISHTSVCTLCDDVMVVTFNGLSKAYRACGFRQGWMVITGPKGRAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSINELILPGGRLRRQRDKAWELLNEIPGVSCVKPKGALYMFPRLDPKVYDIRDDQKMVFDLLQQEKLLLVQGTGFNWPAPDHFRLVFLPREEELEEAIGRLARFLKGYKQ
>NZ_CP007518.2|WP_010633639.1|3998086_3998299_-|DUF1653-domain-containing-protein
MQAPAAGRYRHFKGGYYQVLTLALHTETGEQLVVYQSEQDGAVYARPVVMFMEWIEHQGQVVSRFSPVAE
>NZ_CP007518.2|WP_025201512.1|4011396_4012449_+|electron-transport-complex-subunit-RsxD
MFNIASAPFAHNRRQTQTLMLLVMLACLPGFLAQTWFFGWGTLIQILLALVTALASEALVLRLRQRPVKPALLDGSAALTAVLIGLSLPPLLPWWMLVLGTAFAIIIAKHLYGGLGQNLFNPAMVAYVLLLVSFPVQMTSWLPPSSIAAYDIGFGDAASVIFTGFSLDGYSMAQLKQGVDGLTMATPLDTLKTGLTQGLTAGEVMTHKVFEGWGGIGWSWVNLGYLLGGLFLLQQKVINWRIPGAILGALLLAATLGYLVTPDATATPMFHLFSGATMLGAFFIATDPVSASTTPRGRLVYGVLIGVLVYLIRRFGGYPDAFAFAVLLANLCVPLIDSLTRPKVYGARRK
>NZ_CP007518.2|WP_010633633.1|4012561_4013194_+|electron-transport-complex-subunit-RsxG
MLKSMRKNGVTLAMFALACTALVVLTNELTQGRIAHQQQLEKLRTLSALLPEGSYDNDLVASCKLVQSKRYLGSDQPMPLYTATLQGTTTGYALETVAPDGYSGAIRLIVGTDAKGTVSAVRVLTHNETPGLGDKIELKKSGWINSFVGKFLNRDNESSWAVKKDGGEFDAFTGATITPRAVVKAVKNLLLLQQEHPELLRDAPACDATP
>NZ_CP007518.2|WP_017764207.1|4013210_4013969_+|electron-transport-complex-subunit-E
MEQVDVIDGQSPISESNGRREELKELMLQGLWKNNPSLVQVLGLCPTLAVSSTFTNALGLGLATMAVLVSSNLAISLVRNWVPKDIRIPVYVMIIAALVTSVQLLMNAYTYGLYQALGIFIALIVTNCVIIGRAEAYASKNPPLLAAIDGFMMGLGFTLVLLVLGGLREIIGMGTLFDGADLLLGEWAKSLRIELFHADASLLLAILPPGGFIGLGLMIAGKNAINDWMGRKQSAEKAHCSVPAAGARATQL
>NZ_CP007518.2|WP_017778817.1|4013983_4014625_+|endonuclease-III
MNNQKRRLILERLRDDNPHPTTELNFTTPFELLIAVLLSAQATDVSVNKATDKLYPVANTPQAMLDLGVDGLKEYIKTIGLFNTKAENVIKTCAILLERHGGEVPENREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTGFAVGKNVDQVEEKLLKVVPAEFKLDVHHWLILHGRYTCLARKPRCGSCIIEDLCEYKEKVYPES
>NZ_CP007518.2|WP_017764205.1|4014721_4015135_+|lactoylglutathione-lyase
MRILHTMLRVGDLQRSIDFYTRVLGMKLLRKSENSEYKYTLAFVGYGDEKDEAVIELTYNWGVSEYELGSAYGHIALEADDIYATCEALRAAGAKITREPGPVKGGTTVIAFVEDPDGYKIELIAKKDAGSGLGESF
>NZ_CP007518.2|WP_010633630.1|4015203_4016037_-|OmpA-family-protein
MQLQAGVTEFGAGLDQSVWRLTSDTQVECRLEHPIPSWGTGAFVSRAGRKINLDFELKGLRQQAQTQTVSLGIMPPIWRPGLAGREISQLRFYQQFDGLVEGQTAWTMLDELEGGRMPTFQYRDWYRQNRPVRVSLSSVNFRVKYQAFMDCVNGLLPYSFNDIAFSVLTYDKNSDQLSLASKRRLAMIGEYVKVDKSIDVVVIDAYSDSYGGRWPNQKLSEKRADAIKKVFVDLGIDPGKISVEGHGEKQHVASNETEGGRAKNRRVVINMGRNGAI
>NZ_CP007518.2|WP_024941106.1|4016147_4018121_-|methyl-accepting-chemotaxis-protein
MKKLGLAHKMLLVVCLPLLALLFFSGRYVYERYRVEQEMSQAQAALDVVREAAQLAHELQKERGMSAGFLGSGGNKFRDALPAQRKVVDGLLQRFAQDPALLALSEVQQELAGLTAMRERVSALGVEVAEQVGVYSRIISRLLAVVDQISIHSRDATIALQTNAYAAFLQSKERMGLERATLSNVFGRDSFTPALLQQFISLLAAQNTYLERFQAVASPSQRQLLADSLASPVVAKVAAMEKLALDKAATGGFGVDAEAWFALSTDKIGLLKQSEDRLYQQLSERVDQMRAQSASDFWWAAIGVLLCVALTTFVCWRVVRDLHLGFTALHQTFKRLVKENDLTVRVNWQSGDELGALARDLNHFLEHLEGLLLAVRRSCEVLTRSAAASANVISEVNAGVARGFGQVDLVATAATEMASTVAEIARNATQTSLATQQAIGRARQGDKEVDQTIDAIQLVAGTLSDTQQLVDSLHQDTESVGEALNLIKQISDRTNLLALNAAIEAARAGESGRGFAVVAEEVRALASRTQQAADDIERMLARLRQGANQAVTAMHLGTEQAGLSVTEAKRAGSELTDIVNEVRKVSDMTAQVATATEEQRYVTDDIQHNVMTIREVYEAHRQHSETLQQNSVELDQLARELAGRIASFKLMGGSSPH
>NZ_CP007518.2|WP_010633628.1|4018269_4018929_+|ribonuclease-T
MTDAVHTLKGRFRGFYPVVIDVETAGFNARTDALLEIAAHTLKMDEQGWLVPDQIFHFHVEPFEGANLEKAALDFTGIDPFNPLRGAVSEKEALTEIFKGIRKGMKEQDCGRAIIVAHNATFDHGFVMAAAERAGLKRNPFHPFATFDTAALSGLALGQTVLAKACQSARIPFDNKEAHSALYDTERTTELFCHIVNRWKSLGGWPPAHPDNESDDGGE
>NZ_CP007518.2|WP_010633627.1|4019199_4020522_+|Na+/H+-antiporter-family-protein
MNPVVIAVALMLVLSLLRINVVVSLAIGAIAGGLIGGLTLEQTLSTFTGGLGGGAEIALSYAMLGAFAVAISRSGITDLLARKVISQLGKDASSTRILWVKSLLLASVLAVSVSSQNLIPVHIAFIPILIPPLLHVMAQMQIDRRQVACVITFGLTATYMLLPVGFGGIFLNNILAKNLIDNGVPVELSQLPMAMAIPVLGMFCGLLIAVFFSYRKPRQYDLEKILAAEPETVELNLNHIWVALLAIAVALGLQLMTNSIVLGALAGFVIFTCGGVIKFRESQDAFTQGVRMMSLIGFIMISAAGFAAVMKETHGVDSLVQSVAGMMTGHKGLAALLMLLVGLLITMGIGSSFSTVPIIATIYVPLCIQLGFSPMATIALVGAAGALGDAGSPASDSTLGPTSGLNADGQHDHIWDSVVPTFIHYNIPLILFGWIAAMVL
>NZ_CP007518.2|WP_005302298.1|4020913_4022809_-|DEAD/DEAH-box-helicase
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTAAFALPLLSRLEAGNRNTQILVLAPTRELALQVAEACQRYAHHMPDFHVLPIYGGASYETQTRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMDQCPAGRQVALFSATMPEQIRRVAQKHLKQPKEIKIASKTATATTIRQRYWQVTGLHKLDAMTRLLEVEPYEALLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDILIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLRAIEHATRQAIEPMKMPSTEDINQHRLAKFKERIRETMMGEELEIYVNLVNELIEEDSADPLELAAALAKLVQGDQPLLLDDSIPDPLFSNNNDRGGFERREFNDRGGRDFGDRGDRPARRMPSLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDIADDFSTVDLPKGISPDVLEVIKKARVCQRPLQISRYTEVPAGGNTSSRPPRGDRPFRGDRPFNKDRRPQGDRPFNKDRREGGFDKGRKFGGKRRDS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_6

4209711-4209803

Orphan

Consensus_repeat	Method
AGCCAAAGCGCAGGATTACACCAAGCA	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP007518_6

>merge|NZ_CP007518|6|4209711-4209803|CRISPRCasFinder
AGCCAAAGCGCAGGATTACACCAAGCAGTGCCCATCACCAGCACGGGAAATCACGGCCGTTATCCCAGCCAAAGCGCAGGATTACACCAAGCA

>NZ_CP007518|6|5|4209711-4209803|CRISPRCasFinder
AGCCAAAGCGCAGGATTACACCAAGCA	GTGCCCATCACCAGCACGGGAAATCACGGCCGTTATCCC
AGCCAAAGCGCAGGATTACACCAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_025201444.1\|4216186_4217128_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180519
NZ_CP007518.2\|WP_010633511.1\|4207907_4209674_-\|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA	unknown	unknown	gnl\|CDD\|183016
NZ_CP007518.2\|WP_025201448.1\|4200034_4201240_-\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271177
NZ_CP007518.2\|WP_017785743.1\|4217358_4218483_-\|porin	unknown	unknown	gnl\|CDD\|225744
NZ_CP007518.2\|WP_010633503.1\|4221110_4221770_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|378258
NZ_CP007518.2\|WP_010633516.1\|4202080_4202635_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|182763
NZ_CP007518.2\|WP_162492518.1\|4209872_4212164_-\|DNA-internalization-related-competence-protein-ComEC/Rec2	unknown	unknown	gnl\|CDD\|236924
NZ_CP007518.2\|WP_010633507.1\|4214821_4216012_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP007518.2\|WP_025201450.1\|4199235_4199538_-\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP007518.2\|WP_010633502.1\|4221860_4222757_+\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212519
NZ_CP007518.2\|WP_025201447.1\|4206582_4206783_-\|Trm112-family-protein	unknown	unknown	gnl\|CDD\|225391
NZ_CP007518.2\|WP_005302696.1\|4204976_4205621_-\|UvrY/SirA/GacA-family-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|236538
NZ_CP007518.2\|WP_025201449.1\|4199530_4199887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_005302706.1\|4212101_4212620_+\|DUF2062-domain-containing-protein	unknown	unknown	gnl\|CDD\|378263
NZ_CP007518.2\|WP_010633514.1\|4205833_4206586_-\|3-deoxy-manno-octulosonate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|235473
NZ_CP007518.2\|WP_010633512.1\|4206906_4207908_-\|tetraacyldisaccharide-4'-kinase	unknown	unknown	gnl\|CDD\|234808
NZ_CP007518.2\|WP_017778538.1\|4222885_4224034_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|179614
NZ_CP007518.2\|WP_010633504.1\|4218864_4220937_+\|ATP-dependent-DNA-helicase-DinG	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|236966
NZ_CP007518.2\|WP_024942413.1\|4202937_4204788_-\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP007518.2\|WP_025201445.1\|4213230_4214739_+\|DUF853-family-protein	unknown	unknown	gnl\|CDD\|283518

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_025201444.1\|4216186_4217128_-\|hypothetical-protein	gnl\|CDD\|180519	PRK06298, PRK06298, type III secretion system protein; Validated.	0.00407265
NZ_CP007518.2\|WP_010633511.1\|4207907_4209674_-\|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA	gnl\|CDD\|183016	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA.	0
NZ_CP007518.2\|WP_025201448.1\|4200034_4201240_-\|site-specific-integrase	gnl\|CDD\|271177	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain. Rci protein is a tyrosine recombinase specifically involved in Shufflon type of DNA rearrangement in bacteria. The shufflon of plasmid R64 consists of four invertible DNA segments which are separated and flanked by seven 19-bp repeat sequences. RCI recombinase facilitates the site-specific recombination between any inverted repeats results in an inversion of the DNA segment(s) either independently or in groups. HP1 integrase promotes site-specific recombination of the HP1 genome into that of Haemophilus influenza. Bacteriophage Hp1_like integrases are tyrosine based site specific recombinases. They belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.88363e-34
NZ_CP007518.2\|WP_017785743.1\|4217358_4218483_-\|porin	gnl\|CDD\|225744	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane].	8.51113e-31
NZ_CP007518.2\|WP_010633503.1\|4221110_4221770_+\|DUF2057-domain-containing-protein	gnl\|CDD\|378258	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057). This domain, found in various prokaryotic proteins, has no known function.	3.53434e-49
NZ_CP007518.2\|WP_010633516.1\|4202080_4202635_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|182763	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.	1.69788e-83
NZ_CP007518.2\|WP_162492518.1\|4209872_4212164_-\|DNA-internalization-related-competence-protein-ComEC/Rec2	gnl\|CDD\|236924	PRK11539, PRK11539, ComEC family competence protein; Provisional.	3.81129e-113
NZ_CP007518.2\|WP_025201450.1\|4199235_4199538_-\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	1.90862e-10
NZ_CP007518.2\|WP_010633502.1\|4221860_4222757_+\|histone-deacetylase	gnl\|CDD\|212519	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11. Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients.	3.26082e-134
NZ_CP007518.2\|WP_025201447.1\|4206582_4206783_-\|Trm112-family-protein	gnl\|CDD\|225391	COG2835, COG2835, Uncharacterized conserved protein [Function unknown].	1.91513e-20
NZ_CP007518.2\|WP_005302696.1\|4204976_4205621_-\|UvrY/SirA/GacA-family-response-regulator-transcription-factor	gnl\|CDD\|236538	PRK09483, PRK09483, response regulator; Provisional.	2.47463e-165
NZ_CP007518.2\|WP_010633507.1\|4214821_4216012_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP007518.2\|WP_005302706.1\|4212101_4212620_+\|DUF2062-domain-containing-protein	gnl\|CDD\|378263	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062). This domain, found in various prokaryotic proteins, has no known function.	4.93327e-46
NZ_CP007518.2\|WP_010633514.1\|4205833_4206586_-\|3-deoxy-manno-octulosonate-cytidylyltransferase	gnl\|CDD\|235473	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional.	8.6908e-155
NZ_CP007518.2\|WP_010633512.1\|4206906_4207908_-\|tetraacyldisaccharide-4'-kinase	gnl\|CDD\|234808	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed.	2.01682e-172
NZ_CP007518.2\|WP_017778538.1\|4222885_4224034_-\|MFS-transporter	gnl\|CDD\|179614	PRK03633, PRK03633, putative MFS family transporter protein; Provisional.	0
NZ_CP007518.2\|WP_010633504.1\|4218864_4220937_+\|ATP-dependent-DNA-helicase-DinG	gnl\|CDD\|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0
NZ_CP007518.2\|WP_024942413.1\|4202937_4204788_-\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP007518.2\|WP_025201445.1\|4213230_4214739_+\|DUF853-family-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0

>NZ_CP007518.2|WP_010633511.1|4207907_4209674_-|lipid-A-ABC-transporter-ATP-binding-protein/permease-MsbA
MQQETSQDSWPVFKRLLGYVRDRKLGLIGGIIGMLGYAAVDTTFVYSIKPLIDKGINGNDPTVLKWMPFFVLGIVALRGVANFLSNYCMAWVGNHVVMRLQQQVFNHMVAMPMSFFDRQNTGHLLSKVTYDASQVSSAASTTLVTLVREGATVIGLLGLMFWHSWQLSVIFLVVGPVVGIIIGLISRRFRQISRHIQQAVGDITTSTEQMLKGHKEVLMFGGQKVEEKRFFKVSNNMRQQTMKMVAADAIGSPVVQMVASIALAAFLYVATIDSVRSELTAGTFTVMITSMMMLLKPLKSLTDVNNQFQRAITACHSLFGLLDTEPEQDTGTRTLERARGEIEFRNVTFTYPTKDTPALHNVSFKVEAGKSVALVGRSGSGKSTIASLLTRFYDIEQGEILLDGVNIRDYRLSELRKQYALVSQHVHLFNDTVASNIAYAAEEQYSLDEIKQAARIAHADEFVSKMSNGYDTVVGENGASLSGGQRQRIAIARALLRDAPVLLLDEATSALDTESERHIQAAIDELCKARTSLVIAHRLSTIEKADEILVIDEGHIVERGNHAALMAQQGTYAQLRAIQFGHAAGGNA
>NZ_CP007518.2|WP_010633512.1|4206906_4207908_-|tetraacyldisaccharide-4'-kinase
MLERLWYAKSGWRWLLAPFALLFAVISGTRRYAYRHGWRKGYRASLPVIVVGNISVGGNGKTPVVVWLVEQLQARGYRPGVVSRGYGGKAPHYPYRLDAASTTAQAGDEPVLIARRCGCPVVVAPRRADAVRLLEQSGEVDIIITDDGLQHYALARDIELVVVDGARRFGNACLLPMGPLREPVTRLKRVDAIICNGGEPGRGEYPMRLVADSPRRVRDEAPLTTPLAGPVDALAGIGHPPRFFATLEGLGYQLDQRVAYGDHHPFDRDELVGRFAGKPLLMTEKDAVKCRAFALDNWWYLPVSAELPASLLDTLLHKLGASWKGQGATKAQG
>NZ_CP007518.2|WP_025201447.1|4206582_4206783_-|Trm112-family-protein
MALDIKLLDIIACPVCKGKLHYHPQSNKSVHELVCRFDKLAYPLEEGIPVLLENRARPLNSDELSS
>NZ_CP007518.2|WP_010633514.1|4205833_4206586_-|3-deoxy-manno-octulosonate-cytidylyltransferase
MSFVVVIPARYASTRLPGKPLADIHGKPMVQHVVEKALQSGADRVIVATDDERVQQALAGQTGFEVCMTSKDHQSGTERLAEVCRHYGFAADTIVVNVQGDEPLIPPVIIRQVADNLAAASAPMATLSVPIQDAEEAFNPNAVKVVTDQDGYALYFSRASIPWDRDRFAASREQIGDHYQRHIGIYAYRAGFIQRYVDWAPSALEQVEALEQLRVLWYGEKIHVAQALEAPPVGVDTQADLDKVRALLAN
>NZ_CP007518.2|WP_005302696.1|4204976_4205621_-|UvrY/SirA/GacA-family-response-regulator-transcription-factor
MINVFLVDDHELVRTGIRRILEDVRGIKVVGEAQSGETAVTFCRQNHPDVILMDMNMPGIGGLEATRKILRIRPDVRIIVLTIHSENPFPTKVMQAGAAGYLTKGAAPDEMIHAIRLVHSGQRYISPEIAQQMALSQFASADENPFKSLSERELQIMMMITKGQKVTDISEQLNLSPKTVNSYRYRLFSKLNINGDVELTHLAIRYGMLDADTL
>NZ_CP007518.2|WP_024942413.1|4202937_4204788_-|excinuclease-ABC-subunit-UvrC
MTSSEPLFDSKAFLSAVTHQSGVYRMYDSGGTVIYVGKAKDLKKRLASYFRANVDSIKTRTLVRQIADVQVTVTHTETEALILEHNLIKQYQPRYNVLLRDDKSYPWIIITAHQHPRIGVHRGARKVKGEYFGPYPSGGAVRESLHLMQKIFPVRQCEDAVYANRTRPCLLYQLKRCAGPCVAGLVSEAEYAQQVELAKLFLAGKNQQVIGELVGKMESASGDLRFEEAARYRDQIQALRRVTEQQSVSGNVLDELDVVGVAFEQGTACIHVLFIRQGKVLGSRSYFPKVPADTQLDEVVQSFLLQFYLSGQGGRQIPSEVLLDVALEDEDVIAQTLSQTAGYKVRVVSRTRAERARFIKLASINAQTALRSRLAHKSTITARYDQLEELLELERPIARMECFDISHTMGERTVASCVVFNREGPLSSEYRRFNIDGITGGDDYAAMEQALERRFGKQQEPDKVPDVLFIDGGLGQLRRAEEILARQLEFLGGKYPLLVGIAKGVTRKAGLETLILGESHEELHLPADMPALHLIQHIRDESHRFAITGHRARRAKARTTSTLEDIPGVGPKRRQALLKYLGGLQEVKKAGVEELAKVPGISQELAQAIHDALHSL
>NZ_CP007518.2|WP_010633516.1|4202080_4202635_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MTNIPNLLTFFRILLIPVFVILFYLPYQWSYLAAAIVFILAAATDWFDGYLARKLNQSTAFGAFLDPVADKIMVAAALVVIVEHYNTIWVTIPAMTMIGREIIISALREWMAELGKRSSVAVSWIGKWKTMIQMVSLTGLIWQYDIWMVWLAYVLLYVATVLTFWSMFQYMKAAWGDLSYHSRF
>NZ_CP007518.2|WP_025201448.1|4200034_4201240_-|site-specific-integrase
MQTKFRFTNAAIKALPAQQRDAGATELEFSDTEVIGLKLLSGKSQGSKRFLLRYTLQGKKRSIALGRFGDIDVSQARTIARKYKAMLAEGIDPVAERDSYKTEPTLSEFFWQTFLPHLKTIGKRSINSDIQRFKHNIEPRFGAMRYRQLKAMDVLQLQSEMVHPNNPQQTAYAPSTANRVLAQLKTMGSYAVRWGILDTNEAAKIKLLKEDNARTRFLSIEEMKRVIEVALQDRNQAAGSFIAMLYLTGARKSEVLLAKWEHVNWKDKTLFVPLTKNGKSRIIYLSTLAIDILEKLPRIAGNPYVFASQHIRCQGKPIGEPRCAYERVLQKAGIEDRDEVCFHTARHSVASALVSSGQYSLYDVKAQLAHASIQSSQRYAKLTSERSRNISEGLSSMIQAE
>NZ_CP007518.2|WP_025201449.1|4199530_4199887_-|hypothetical-protein
MAWPEETLLAAYPALHVSVMERINEPFSSVEEARAFWDATGCCLIIIEMTDSVSEFQAMPQHIQNQVMFGLRYPDQELAISEDWRLLLAILNDEGAGIYLLIHSDAPLLPTLEAMHHE
>NZ_CP007518.2|WP_025201450.1|4199235_4199538_-|DUF1232-domain-containing-protein
MSNPSHSDIMRKLKEIKGIKELLEKAVLLYVLLTDGDLPVWCYALIIGALAYLVNPFDVVPDPIPFAGYLDDLSVITSALAALPVKSHHRQSAKDRMRSL
>NZ_CP007518.2|WP_162492518.1|4209872_4212164_-|DNA-internalization-related-competence-protein-ComEC/Rec2
MLVFLECRRIRQPALYESFGHIETLLNTCTMDLRLLSFALGASSSLLWPWLPSWEWGGLMLLLAFPLAGCRCWRLLFLLLGILWMQGNLHYRLAWLDQLGKKTSHIITAQLQSAEPGGDKFVRLVLRVNRLDEQALTPAPLVRINAYQALPTMTAGSRLTLEVSLKPAHGLANEAGMDGRRLLLGKGITATGNLRRVIQIEAVPAGLRERWLARAAVSWQDLSQGPLLAALTFGEQAGITTEQWSLFRGSGLTHIIAISGQHIALVAVLGWWLGRLFGLRGAILLALLFAALYSWLAGFAVATERALIMVLVWSLLRWRWREWPAHRVWLWAFVVLTLWDPFALYSAGFWLSFLAVALLLVASLLEAKPGLIRLQGLLLLGLLPLQLALFEGIAPLSLLLNLLALPLFCIGIIPLALVGVLLAPLSAELAHLMFWLADVGLQWILWALERLASQWQLWWPVPGWVLPLTALLSLLWCAWHVPGGRSLLLPGGVALLLAAWPAPSHWQLRVLDVGQGLAVLITRGERGILFDTGDRYPGGYNMADAVILPLLNRLDVRVLDYLVISHKDRDHAGNRRAILQALPVRHELSSFDFGRFTTLCRRGQQWRWQGLEMAVLWPQQPGGGHNNDGCVLQIRDGERRILLSADIERQAEQRLLALEGAGLASTLLVSPHHGSRTSSTAPFVAAVAPRYVVHSAGFMNQWGFPRPEVVARYREAQQWVTGLDGEILVEPAADGLRIHAERGQGPWFRRNGDWWRPAFWPAR
>NZ_CP007518.2|WP_005302706.1|4212101_4212620_+|DUF2062-domain-containing-protein
MPKRLIQRWLPDPATLKEHKHLRLFGKLLLDANLWHLNRRSAAGAFAVGLFMAWVPLPCQMLLAAGGAIACRVNLPLSVALVWLSNPITMPPLFYGAYLTGCQLLGQSSQHIEIEFTWAWLVSVFETVAPPLLLGSLVLALLSSLIGYALIRTCWRISTVRQWQKRKVARAC
>NZ_CP007518.2|WP_025201445.1|4213230_4214739_+|DUF853-family-protein
MAEPLTLAYASGHPLALLPAMANRHGLITGATGTGKTVTLQVLAEGFSRLGVPVFLADVKGDLSGLGAAGAGSAKLDARLAQLGIPAPAFAASPTLFWDLFAEQGHPVRATVSDMGPLLLARLLGLNDTQSGVLELVFKVADDEGLLLLDLKDLRAMVQFAGDNAKSLTTRYGNVSTASIGAILRNLLTLESADGDHFFGEPMLDIQDLLQTDEAGHGHINVLAASKLTQSSRLYACFLLWLLSELFEQLPEVGDPDKPVLVFFFDEAHLLFNDSPKALLEKIELVVRLIRSKGVGVYFVTQSPADIPDSVLGQLGNRVQHALRAFTPSDQKAVRIAANTLRANPAFDAAGVITELGVGEALVSLLDEKGRPSMVERAFIAPPASRIGPLSDAERQTLIQGSLLHGRYETPEDRESAFERLNGGKVTTTGEQGSEPSSNGEGGLLDALNGILFGRTGPRGGQHDGVVQTAAKSVARTIGSEVGRQLVRGVLGSLLGGGKRRR
>NZ_CP007518.2|WP_010633507.1|4214821_4216012_-|aspartate/tyrosine/aromatic-aminotransferase
MFEKVVAAPADPILGLTEAFRADSRSHKINLGVGIYKDETGATPILHCVKKAEQKLLTDEKTKNYLGIEGNIEYGRIVQQLLFGQDSALVNSGRAKTAQAPGGTGALRIAAEFVVRNNLAKTIWISDPTWANHVSVFQAAGLTVKWYKYYDAATKGLDFAAMQASLAEAQAGDLVLLHGCCHNPTGIDPTADQWRALARQSAAAGWLPLFDFAYQGFARGIEEDAEGLRIFAECHDELLVASSFSKNFGLYNERVGAFTLVSATKAIADVAFTQVKTVIRANYSNPPSHGAAVVTAVVSDPALYAEWVEEVAAMRVRIREMRELLVEKLAARGVNQDFSFIREQNGMFSFSGLSKDQVERLKSEFAIYIVGSGRISVAGITRANIDPLCDAIAKVL
>NZ_CP007518.2|WP_025201444.1|4216186_4217128_-|hypothetical-protein
MIDFSHPQWRELARQLLDNPTSVVRARQWQPLLGLLKDNQLLLALGNHHYELTPAGRRYLTRELTLAEIATAPPTPEEWLHGQGWQLAEQVNERVLAALYRKSEVSFTPNEQIDFEDKGIRLCSDQQVRLRAPQPFSLFFSGGALLDAAPWLQALGEVALPERTLASLGKILWGEGELLRVITTDSVGAFAELVLPAGTLLIWAPASAQQALQQVIAALPPQVQWSHLTSLDPSGVDRVLTLAQRLGRPASWWLPTVLAPIMTAYALPLADSRPWEPSRIPKSLLAVCSGLVESNGGLSAEVCALAPQWHAIG
>NZ_CP007518.2|WP_017785743.1|4217358_4218483_-|porin
MKKTILAIAIPALFASAANAAVVYDKDGTTFDVYGRVQANYYGDHNKAVGATDDAYKFDTKTGQSVFVPGTAASYQDVDGELVGSSRLGWSGKIALNNTWSGIAKTEWQVSAENSANKFDSRHIYVGFDGTQYGKIIFGQTDTAFYDVLEPTDIFNEWGDVGNFYDGRQEGQIIYSNTYGGFKGKLSYQTNDDKAVKVTDVGQGIKETAVYGPNVKRNYGYAAAAGYDFDFGLGLNAGYSYSDLESTTSSASGDKKEWALGAHYAINGFYFAGVYTQADLSYDHTTGGDKDKGRGYELAASYNVDAWTFLAGYNFTEGKAASNTAGAEYKDIVDETLLGVQYAFTSKLKAYTEYKIQGIDKMDDEWTVALQYNF
>NZ_CP007518.2|WP_010633504.1|4218864_4220937_+|ATP-dependent-DNA-helicase-DinG
MLSTRLKTTIRNTYRQIADGLPGFVPRKEQNFLVAEIAKTLTGEYDKQRRILVAEAGTGIGKSLSYAQGAIPVARLTQKKLVISTATVALQEQLIHKDLPFYHRHSELPFRFMLVKGRQRYCCEHLLEQAASGSEMANFEFDFGALSKHKPSDADKDCYQALWQAYTEGKWDGDRDNWPKPINDNCWDRIAADRHTCNKALTHHQHCPFHRARNDMDAADVLVVNHALLLSDLTMGGGIILPPPDECLYVLDEAHHLPTIARDHGAASASVKGSRRWLEKLAQGAGKLARTLNKESLLDPQLKLQDALASLQPDLKALEQWLAANDRLFNEEKHHRFADGVLPDPLPMLAENLKEASKKALRALDRMQGAIGEALKDGEIRRKEAEPLLAESGFYLQRLEGFCALWEMLGRHVAEGKTPLARWMVKSDDGDIWLHASPIEVGYLLEEWLWSRCLGAVLVSATLTALSSFSYFRHQVGLNEHDGTRYLRLRSPFDYQKAELYLPKMEHEPNAPAFTQELVSILPRLLAGKEASLVLFSSYRQMNEVAVGLRAKGLSLLVQGEASRNALLTLHKQKCDGGQASILFGTGSFSEGLDLPGHYLTNLVITKLPFAVPNSPVEEATAEWVEKRGGNPFLQLTVPEASRKLIQACGRLIRKEADRGRVTILDRRLLTKRYGKGLLDALPPFRRRIE
>NZ_CP007518.2|WP_010633503.1|4221110_4221770_+|DUF2057-domain-containing-protein
MKLTVLVPALAGLLWAGSALADAQLEVNNPYVVQLIDGQSINPKLLDKTSTYPIKAGKHQLVVAFEGNYSSRSDTKLVTAEPLVINFTAADNQKLVLDYKKPRNESEANQFVKEQKVALKDKSSGQVVTTEQFVLPKVEGFQLTRDYQQELINMGKAFNQPKTVAVSTAAVMAANSAPVQVAPSKAQSNPEALTQLQNWYNKADAETRKAFQIWVIQQQ
>NZ_CP007518.2|WP_010633502.1|4221860_4222757_+|histone-deacetylase
MSLRIFHHPLYSALALPARHRFPLAKYQALFEQLENLGYPLAEAAPASRAQIERVHDAAYVEAALTGTLDADAIRQLGFPWSPVLIERTLRSVGATLAASRHALAQGCGLQISGGYHHAHRDFGSGFCLFNDLVIAAQTCLDEGRCEQVLIVDLDVHQGDGSAALCQGRRDIITLSLHGEHNFPRHKPASHMDFPLPSGMEDDAYLSTLAEALNLALRLYAPDLILYQAGVDVHHADELGYLALSDEGVRQRDAMVFDCAQRHGLPIVAVPGGGYRRDWQHLIPLHMSLFEEANKRYG
>NZ_CP007518.2|WP_017778538.1|4222885_4224034_-|MFS-transporter
MTIYTRPVLLLLCGLLLLTLSIAVLNTLVPLWLAHEQLPTWQVGMVGSSYFSGNLLGTLLAGTLIRRCGFNRSYYLASALFAAGCVGLGITLDFWSWLGWRFIAGIGCAMIWVVVESALMCSGNAHNRGRLLAAYMMVYYLGTVLGQLLVSKLPTGLMEVLPWASGLILAAILPLLFTRIVSERSEAQGSTRVWSMLRLRQARLGVDGCIISGIVLGSLYGLMPLYLNHQGVSDAGIGYWMAVMVSAGILGQWPVGRLADRFGRLPVLRVQVLVVILGCGAMLGGVAMGPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTIGSLLGPAYTALLMQHLSDNLLFIMIAGVALLYLLMLLRPMGKHSTPVAHA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_7

4458795-4458886

Orphan

Consensus_repeat	Method
CCCACCCAGCGCCCGTGCTGATCTTCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007518_7

>merge|NZ_CP007518|7|4458795-4458886|CRISPRCasFinder
CCCACCCAGCGCCCGTGCTGATCTTCGATGTGGAACTACTCGGTATTCATTAAACCGACAAGCTCCCACCCAGCGCCCGTGTTGATCTTCGA

>NZ_CP007518|7|6|4458795-4458886|CRISPRCasFinder
CCCACCCAGCGCCCGTGCTGATCTTCGA	TGTGGAACTACTCGGTATTCATTAAACCGACAAGCT
CCCACCCAGCGCCCGTGTTGATCTTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_025201379.1\|4456998_4458153_+\|sodium:phosphate-symporter	unknown	unknown	gnl\|CDD\|162157
NZ_CP007518.2\|WP_005303036.1\|4446999_4447500_+\|SRPBCC-domain-containing-protein	unknown	unknown	gnl\|CDD\|176856
NZ_CP007518.2\|WP_025201375.1\|4469622_4470300_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP007518.2\|WP_025201382.1\|4449829_4451293_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP007518.2\|WP_005303054.1\|4454938_4456282_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP007518.2\|WP_025201373.1\|4472609_4472990_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_025201381.1\|4451441_4452731_+\|4-aminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236032
NZ_CP007518.2\|WP_010633350.1\|4458312_4458783_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP007518.2\|WP_025201380.1\|4456369_4456750_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_025201374.1\|4470397_4471561_-\|MFS-transporter-TsgA	unknown	unknown	gnl\|CDD\|235151
NZ_CP007518.2\|WP_144439537.1\|4473660_4474863_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007518.2\|WP_005303048.1\|4453088_4454432_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP007518.2\|WP_025201377.1\|4465050_4465983_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|226229
NZ_CP007518.2\|WP_017765712.1\|4448904_4449519_-\|HTH-type-transcriptional-regulator-PuuR	unknown	unknown	gnl\|CDD\|182158
NZ_CP007518.2\|WP_025201376.1\|4466180_4469435_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182169
NZ_CP007518.2\|WP_025201378.1\|4460155_4465039_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|236848
NZ_CP007518.2\|WP_017765719.1\|4459136_4459904_+\|dioxygenase	unknown	unknown	gnl\|CDD\|153375
NZ_CP007518.2\|WP_019840188.1\|4447575_4448853_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP007518.2\|WP_101531749.1\|4474876_4475323_+\|STAS-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379507
NZ_CP007518.2\|WP_017786353.1\|4471614_4472316_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|237368

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_025201379.1\|4456998_4458153_+\|sodium:phosphate-symporter	gnl\|CDD\|162157	TIGR01013, Sodium-dependent_phosphate_transport_protein, Phosphate:Na+ Symporter (PNaS) Family. [Transport and binding proteins, Cations and iron carrying compounds].	2.20697e-39
NZ_CP007518.2\|WP_005303036.1\|4446999_4447500_+\|SRPBCC-domain-containing-protein	gnl\|CDD\|176856	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Micromonospora echinospora CalC, human Aha1, and related proteins. Proteins in this group belong to the SRPBCC domain superfamily of proteins, which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM), by a self sacrificing mechanism which results in inactivation of both CalC and the highly reactive diradical enediyne species. MeCalC can also inactivate two other enediynes, shishijimicin and namenamicin. A crucial Gly of the MeCalC CLM resistance mechanism is not conserved in this subgroup. This family also includes the C-terminal, Bet v1-like domain of Aha1, one of several co-chaperones, which regulate the dimeric chaperone Hsp90. Aha1 promotes dimerization of the N-terminal domains of Hsp90, and stimulates its low intrinsic ATPase activity, and may regulate the dwell time of Hsp90 with client proteins. Aha1 can act as either a positive or negative regulator of chaperone-dependent activation, depending on the client protein, but the mechanisms by which these opposing functions are achieved are unclear. Aha1 is upregulated in a number of tumor lines co-incident with the activation of several signaling kinases.	2.3911e-21
NZ_CP007518.2\|WP_025201375.1\|4469622_4470300_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	6.07742e-17
NZ_CP007518.2\|WP_025201382.1\|4449829_4451293_+\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP007518.2\|WP_005303054.1\|4454938_4456282_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	5.39915e-41
NZ_CP007518.2\|WP_025201378.1\|4460155_4465039_+\|PAS-domain-S-box-protein	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	3.95743e-111
NZ_CP007518.2\|WP_010633350.1\|4458312_4458783_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	5.43928e-61
NZ_CP007518.2\|WP_025201381.1\|4451441_4452731_+\|4-aminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236032	PRK07495, PRK07495, 4-aminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP007518.2\|WP_005303048.1\|4453088_4454432_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	5.48648e-43
NZ_CP007518.2\|WP_025201377.1\|4465050_4465983_+\|diguanylate-cyclase	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	1.90388e-93
NZ_CP007518.2\|WP_017765712.1\|4448904_4449519_-\|HTH-type-transcriptional-regulator-PuuR	gnl\|CDD\|182158	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR.	2.46324e-115
NZ_CP007518.2\|WP_025201376.1\|4466180_4469435_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|182169	PRK09959, PRK09959, acid-sensing system histidine kinase EvgS.	1.75494e-89
NZ_CP007518.2\|WP_101531749.1\|4474876_4475323_+\|STAS-like-domain-containing-protein	gnl\|CDD\|379507	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 99 and 341 amino acids in length. This domain is distantly related to the STAS domain.	7.89837e-05
NZ_CP007518.2\|WP_025201374.1\|4470397_4471561_-\|MFS-transporter-TsgA	gnl\|CDD\|235151	PRK03699, PRK03699, putative transporter; Provisional.	4.04958e-161
NZ_CP007518.2\|WP_017765719.1\|4459136_4459904_+\|dioxygenase	gnl\|CDD\|153375	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine. This subfamily is composed of plant 4,5-DOPA Dioxygenase, the uncharacterized Escherichia coli protein Jw3007, and similar proteins. 4,5-DOPA Dioxygenase catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine (4,5-DOPA). The reaction results in the opening of the cyclic ring between carbons 4 and 5 and producing an unstable seco-DOPA that rearranges to betalamic acid. 4,5-DOPA Dioxygenase is a key enzyme in the biosynthetic pathway of the plant pigment betalain. Homologs of DODA are present not only in betalain-producing plants but also in bacteria and archaea. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.	6.23148e-100
NZ_CP007518.2\|WP_019840188.1\|4447575_4448853_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.35381e-76
NZ_CP007518.2\|WP_017786353.1\|4471614_4472316_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|237368	PRK13374, PRK13374, DeoD-type purine-nucleoside phosphorylase.	3.59171e-161

>NZ_CP007518.2|WP_010633350.1|4458312_4458783_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKLVLIALLVAGVAYYFYSSSNNRKLAEENVRKGAEFLAANKEKPLVTTTASGLQYEVLTPGSGTVHPTATSKVKVHYEGKLLDGTVFDSSVARGEPIEFGLNQVIKGWTEGVQLMVEGEKTRFYIPANLAYGDRAAGKIPPGSVLIFDVELLGIQ
>NZ_CP007518.2|WP_025201379.1|4456998_4458153_+|sodium:phosphate-symporter
MHSTPSFAQQQTRRTGPLFNWLAVITLIYLILVAVGAVSHGFKGFSGGAEGAAQIFAFANNPFVALLLGILATALVQSSSTVTSVIVGLVAGGLPISMAIPMVMGANLGTTITNTIVSLGHIRDRGEFRRAFAAATVHDFFNLLAVFIFLPLELMFGLLQKSAEALATLLVGSADMSMKGMDFMKPLISPALNFIDDLVAFLPGKGPAIATIVIGILLILGCVTWLGKVLQRVLVGRAKEVLHKALGRGPLTGIASGTLVTVMVQSSSTTTSLMIPLAGGGVFSTRQLYPFTLGANIGTTITALLAATAISGAGAKLALTIALVHVLFNLFAVVLIYGVPFLRELPVKAAEGLARVGSENKLLALGYVAGLFFALPALMMVAAK
>NZ_CP007518.2|WP_025201380.1|4456369_4456750_-|hypothetical-protein
MRAWVLCLSLGLLSVGAQASVLKAECNLDKAMKNEALNATLGGKGRCDTDKLVRQQKEKAGAEVKKHTTDVLDQKSAGLKEGKSQLQGTQQKVNQAGQQLKQTQQDVKAVAKDPLKAAATAVINQG
>NZ_CP007518.2|WP_005303054.1|4454938_4456282_+|APC-family-permease
MAGAKLLKTLTLFQVVVMGLAYLTPMAVFDTFAIVGDITEGRVATAYLLALGGILLTAISYGHLVRKFPSAGSAYTYAQKVFNPYIGFMVGWSSLLDYMFMPMINILLAKIYLTAMFPGVEPWIFIFGLVTVMTFLNLRGINLVANFNGVIVFIQLAIITVFLGLMGWGIYQGEGAATLLSSRPFHFESAGMVPLFTGATILCFSFLGFDGLSSLSEETPNAGKVIPRAIVLTALIGGIIFVTVSYFLQLYFPDLARFKEPDAVLPEIALYVGGTLFQSVVLVCTTVAVLASGMAAHAGVSRILYVMGRDRMIPERVFGYIHPKYRTPAINVLMVGALALSAVSFDLDMALALVNFGALVAFTFVNLSVIGQFWVREKRNKSLKEHLLFLLLPLLGAATIGALWINLEQSSLELGLIWAGLGVTYLFLRLAVFRIPFRQYEEAADSQ
>NZ_CP007518.2|WP_005303048.1|4453088_4454432_+|APC-family-permease
MNAQPVGLKKSLKLWHVVIMGLAYLTPMAVFDTFGIVTEITEGHVPTAYLFALIGMLFTAMSYGHLVRKFPSAGSAYTYAQKVFHPYVGFMVGWVSLLDYMFMPMINMLLAKIYMEALFPSVEPWTYILGLAAVMTFLNLRGIKLVANFNSLIVIMQFSIIAVFIGLIAWGVYHGEGLGTVASSRPFFSDQMAVAPLLTGASILCLSFLGFDAITTLSEETPNADRVIPRAIVLTALIGGVLFISVSYFLQLFFPDISRFQQPDAVLPEIALYVGGKLFQAVVLVCTTVAVLASGLASHAGVSRLLYVMGRDRALPSRFFAYIHPTWQTPALNVLLVGILALSAVSFDLEMALALINFGALVAFTFVNLAVIAHFYVKLGHNKTLRDHLIFLLLPLCGAACIGVLWLNLEPASFELGLIWAALGALYLLLRLTVFRVQLRRPETDAS
>NZ_CP007518.2|WP_025201381.1|4451441_4452731_+|4-aminobutyrate--2-oxoglutarate-transaminase
MSQSASNKAWQARREAAVVNGVGTLLPVFIERAQNAELWDVEGNRYIDFASGIAVLNTGHNHPKVVAAVRAQLEKFSHTCFQVTPYPGYIELAEKLNALVPGPTPKRTLFLSTGAEAVENAIKIARAHTGRSGTIAFKGGFHGRTMMGMALTGKVVPYKTGFGPFPGEVYHLPFPSDYLGVSEADALAALDLCFSSDIEPTRVAAIIIEPVQGEGGFYPASASFMQRLRQLCDQHGILLICDEIQSGFCRTGKTFATEYSGIEPDIMTLAKSLAGGFPLSAVVGKAEVMNAAKPGGLGGTYAGSPIACAAALAVLEVIEEEQLNQQAQAQGEQIKARLQQLAERFDCIGDIRGPGAMVAMELVKQRDANRPDAELTKRLVAEAGKRGLVLLACGVRANVIRFLAPLTASPAIIEEGLTLLEQALQAAHA
>NZ_CP007518.2|WP_025201382.1|4449829_4451293_+|NAD-dependent-succinate-semialdehyde-dehydrogenase
MSASQPALSLIKSLAYIDGRWCEAGGGHRFEVHNPATGQVITQVPDMDEGDTRRAIAAAHAAQPGWAALTAKERSNRLYAWFELIMANQEELARIMTCEQGKPLAEAKGEVAYGASFIQWFAEEGKRAYGRTIPGFSSDRRLATIKQPVGVVAAITPWNFPIAMITRKAGPALAAGCTIVIKPAAETPLCALALAALAEQAGIPAGVINIVTSHQAAAVGNELCNNKTVRKLSFTGSTRIGKLLMRQCADTMKKLSLELGGNAPFIVFDDADLDAAIAGALASKYRNAGQTCVCANRILVQAGIYDAFAEKLTAAVKAFKVGDGMSEGTQIGPLINPAAASKVAELVKQATAAGAELLLGGEAHPAGPLFYHPTILGKVDKTNPILQEEIFGPVAPLVRFETEAEAIALANDTPYGLAAYFYGRDIARVWRVAEQLEYGMVGINEGIISTELAPFGGIKESGLGREGAAEGLEEYLETKYLCFGGIR
>NZ_CP007518.2|WP_017765712.1|4448904_4449519_-|HTH-type-transcriptional-regulator-PuuR
MQQPQGETRWQSMTDNPLAQSTQAQSMGERLAATRRRLGLSQRRVAELSGLTHGAICMIEQDKVSPSVASLQKLLSVYELPLSRFFAEEEVASTPSVVIRAEQLIELGSQGVSMKLVHNGNNRRQLGFMLETYAPGTDTGGQVTHLGEEVGTVLEGSVILTVAGQTYQLSAGDSYVIDTGEPHSFSNPSGQVCRIVSAHTPANF
>NZ_CP007518.2|WP_019840188.1|4447575_4448853_-|FAD-binding-oxidoreductase
MTEHVNSYYAASANQHAPYPTLTEQLECDVCVIGAGYTGLSSALHLVEKGYSVVVLEAARVGFGASGRNGGQIVNSYSRDIDTIEANCPPEQARLLGSMLFEGGQIIRERIKRYNIQCDLQEGGVFAAETEKQLHELKAQKARWEKWGNDKLELLDADGVREVVASDRYVGALLDKSGGHIHPLNLALGEAEAIRLQGGKIFEQSAVTSITPGQPALVKTAKGAVKARYVVVAGNAYLGNLVPELAGKSMPCGTQVIATEVLGEERARSLLPQNYCLEDCNYLLDYYRTSGDHRLIYGGGVVYGARDPADIERLIIPKMLKTFPQLADVKVEYTWTGNFLLTLSRLPQFGRIGHNIYYMQGYSGHGVTCTHLAGKLLSEVLSGQAERFDAFAKLPHYPFPGGRLFRIPFTAAGAAWYTLRDRLGV
>NZ_CP007518.2|WP_005303036.1|4446999_4447500_+|SRPBCC-domain-containing-protein
MDNKQIEGNIFVPAHIDDVWRAWTTESGLRSFLAPECLMVPEPNGPFEIYFRPDAPLGERGSEGCRVMAVMPHDLLSFSWNFPPSLPHIRQQKTQVCLRFVPEGQGTRLYFLQTGWANDPDWDQGYAYFRDEWLETSLPRLQYRFTHGPIDWNNPPDKQQLKSLAQ
>NZ_CP007518.2|WP_017765719.1|4459136_4459904_+|dioxygenase
MSIAPVWFISHGAPDLVLRDQPATHFLKNLRLGDLKGLVVISAHWFTRSELQINVEPNPALMYDFYGFPEPLYHIRWPASSPLWLQEAVSDQLLLAGLPAEPVRRELDHGVWSPLSLMDPASSVPLVQLSIPASFTPRQLWQLGEALQQLRAQGIGILASGAITHNLRALGPENSPVPGWARSFVDWLELTMAEGDRAALEDYRARAPGAVESHPHDDHLRPLFVALGAAGQDKPVKLHDSWDGGSLYMGSYRFA
>NZ_CP007518.2|WP_025201378.1|4460155_4465039_+|PAS-domain-S-box-protein
MRNHHPFLGLNRSAGLVLLIGLLLSLLGTLLLHYSNDKQVQASITAATEHVADTVKARLDLYQYGLRGVRGAILTAGEHAFDNEDFVRYSLTRDVDSEFPGARGFGFIRRVKDADLDDFILRARRDGRPGFTLQLLSPYRGEHFIIQFIEPLSRNKAAIGLDIASEPSRREAALAAIRSGEVRLTPPITLVQATGKPRQSFLMLMPIYRTVTTPATPEEREAAGFGWSYTPLLMEELLDALHLESPAFHIRLIDVTDPRHIQPFYTSAIDHESRNPHHITMSRAAEREIHGRRWQIRLDAHPLFVAQLNQTSPYVVLFTGCLFTLLLTLLARMRAQGQQQRLQLIEEQARLAAIVAGASDGIIAKTLNGVIVSWNKGAEDLFGYPAGEALTRTDSALFQTDHDSASERALLADLRQGVRIPSFSARRRHRDGHLLDLSISIAPIYDHRGKLVGTSETIRDITAQKQAEAKILELNANLEHQVAERTAELSKINVLLSNVLRSASAISIIAADLEGTITLFNEGAEQLLGYSAADVVGKETPGIFHTCDEMQARSVELSAQYGEQISGFQVFVYKPEREGAESREWTYVRKDGSRFPVTLVITAIRDEQGRSQGYLGIGLDITDSKAAEKKLAESLEITRAILDTAVNPIMTMDPDGRIHSLNPAGQTAFGYQAGEIQGRQVQTLLQGSDEHALGETPLGTLSDSQLAALMEREFIGRRRDGSEFPLQMSIGRMQAAGSSMFVCIMTDMTQQLAQRNEILSTRDQLQMAADVAELGIWSWELGSNALSWNNRMFELYDLPLTLREEGLNYQHWANRVHPDDLAATTASLNRAVAGTGIYDPVFRVMQDNGDHRVIQAGAKVERDSSGQALRVIGFNRDITAQTELESRLLYAKEQADAASQTKSSFLANMSHEIRTPLNAVLGMLQLIQYTELTARQLDYVVKAHSAANSLLGLLNDILDYSKIEASKLQLDLHPFDIELLMRDLAIVLDGNQRQKEIEVMFDIDPHLPNHLIGDSMRLQQVLTNLAGNALKFTIKGQVVITMALLARHEQTVTIRVAVTDSGIGISAHQLERIFESFTQAEASTTRRFGGSGLGLVICKRLLKLMGAELRVESEPGRGSRFWFDITLAQAAPQSLKEACPDMAPPPYILVVDDSELAAELLQRTLLQLGWQAELVHSGAEAVRRVGEARALGRPFDIVLMDWSMPGMDGLNAAAQIRQQAGQDPVPRVIMVTAYGHEVFTESHQSGATPFVSLLTKPVTPKQLAEAIYQALNGQDVAPALPAQHTRRLSGLTLLVVEDNLLNRQVACELLSCEGARVLLAECGRDGVAMVLQQAPSFDAVLIDMQMPDIDGLEATRQIRAHPQFANLPIIAMTANASEADRQLCLAAGMNEHVGKPIALEQLVSTLLAQLGKAGQPALAQPPSPTASEALLEAESVIRQRFDNDIELLQRILSLFGPDMAEQLEALHQAIAAGQVTEACRILHAIKGSASTMGACRLATLAKAQEQALLHADQPQAAALLADAGWLQLLQETVRLSLESLEKAFAPPPDTTARPADDALSLAEWREAMQHILTLLEDGNLAAVELTEALAPKTPPQLHSSFHQFAGLIDNLEFGAALKLGKSLCVNQ
>NZ_CP007518.2|WP_025201377.1|4465050_4465983_+|diguanylate-cyclase
MVPWNLPTNRRPKLLIVDDQAINIRLLHQLFREECEIFMATSGEQALTLCRSLLPDLVLLDVIMDGMSGHEVCQQLKADPDTRDIPVIFVTAQQEETDEEYGLSLGAVDFISKPISPNIVRARVKAHITLKLQGDLLRNLAMLDGLTGIPNRRQFDDELMRQWRQGCRDNTPLSLIMLDVDYFKRYNDRYGHQAGDHCLQSIAAVLAERLGRPHDLVARYGGEEFACVLPNTPLASAVHLADSMCSAVRELAIEHLASEVARVVTISLGVVCTIPSQTGTPQQLLEAADRQLYRAKEAGRARVAADGEGV
>NZ_CP007518.2|WP_025201376.1|4466180_4469435_+|transporter-substrate-binding-domain-containing-protein
MNLIRPLLLLCLLLPLCAQALTLHSRPYLQSPPAPASTADQPWLAEMTALRVGVLRHDYRPFAMIGPDDHFEGIAADYLDILARELQKPVKLRAFNDSRSALAALRAGDLDLVNLGNLNLGAAEQAGIALSRRYFSSAPVFSALAAEQGPLLLPGQRVATVRGYVNEAEFKRYYPDLVLVNYPSNVAAFDAVFFGHEPLLLSDPHSLHYLNSERFDKIRQRSQAQPAIAADGFRFAVSAAHPGLLALLDQTLEGVSDVTRSLIFNQWNGPIRDIIERPGDLYSREERAWLASAGPVKVWLMDDLYPYGVRDYDNQLTGMSVEMLEKISKRSGLRFEFVSYGSEQARKEALLKGELDLIGAISRPVAEGYRLRPSLPYATDDIYVLVARKGDALSGDLAQLAGKRVGSTIYNPIAKGLGDSQVSFLESADEAMEAVNEGRLDAAIVPLYFAQHAVEGGRLQQIRIAGPADDQPIRMGFAGLSANRMLMDIIDKTILSIAPNELAMMSYQWRNRKLPAPTFMERNAPYFYLLLAGLCAVALLLFYRNRMLNRLARSEQASRRQLEEHVRFIEALGESLPHPIVVRDKGGKVILCNSKYLATLNAPIERVLGTSFAEGLKGLLGAEAIAALEQDFQQVLRSGSPILSDRIFSQRGPRQFVYHWMVPYFDYRGAISGVINGWIDITERKTMEEALRRAKEQADRASRAKSDFLATMSHEIRTPMNAILGMLELASQDPALARHTGEQLRIASESANGLLDLIGDVLDISSIEAGQLTLAPEPCELAPLLHSVARACKGMAQQKGLGYRVELPSLPRVLIDPLRLRQIVFNLLGNAIKFTERGEVSLQASLTGSAEQPLLHLIIRDSGVGIAPDKLPGLFSPFYRAHDPYQFAGTGLGLNIARMLCQLMGGKIAVSSELGSGTELRIRLPLTPLAAPLEPLDAASPPAGPLLVPSPRPFAPTPLRVLVVDDNHANQVLLRQQLKHLGHEVCVRGNGAEALQASQSQPFDLVITDCQMPLMDGFELTRRLRARGHTLTIWGFTAHATARERELCLAAGMDDCLYKPIGLARLRTALASLEQTNAGALSPV
>NZ_CP007518.2|WP_025201375.1|4469622_4470300_+|Crp/Fnr-family-transcriptional-regulator
MQLKPLLKGRFQPHWQAGHDLIEQVVSSCITERRLIPEGEPLMRQGEPLRDLVLVKSGRIAMGHTAMNGRRFQLGTLECDHQLFGEMEFFTGYRCQLDIIAEEPLAVARIDGEQLEQALVAHPRVALFFATAIAIDYQDTVDIFTCRMLYPISYNIALDLYHSHCHHNPVSGFRKGYQEAERFGTTDRVYRRAVKELMDKGLVERGEEGLQIRDLAGLKAFLEQP
>NZ_CP007518.2|WP_025201374.1|4470397_4471561_-|MFS-transporter-TsgA
MNNKLSLTAISFLANFVMAGFATQFGMLIDPIAAKFGADVNQVASIFSLLNGGALAGTIAAFFLIEKVGLKRMTLLCYGLIALAAASLHLTGSLYVVMAAMTVIGLCGGVGLCIAGTLVVSVWQARMQSTMLVVQDATFNVAGVVFPLITTYTLTHAMAWSWSYLAVGGVALATMLVAVLTNFRSCEAGGESAGNEHSEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKNKFGIPFEEAGNIITQYWTAALLGALVSTAIVTRIAIRTFLLVIITLAMGMTALIVTTDNLSQLPYLTYGYGFVCAALYNAFIAYGVSFVRQASSKNVSYILISGSAGAMFSPAISAMFEQVIGLQAVMYAIPLIYGVILAMLVASLRMARPQPCLA
>NZ_CP007518.2|WP_017786353.1|4471614_4472316_-|purine-nucleoside-phosphorylase
MTAHINANPGDFAETVIMPGDPLRARYIAETFLTDAREVTNVRNMLGYTGYYNGQRISVMGHGMGIPSMVLYAHELVNDFGVKRIIRIGSLGATQLHVQMRDVILAQAAGTDSPTNAKRSAGYQMATSADFALLHKAFTKAQEKAIPVKVGNIFTGDLYYDPDDNLIPALEKFGVLGIDMEVAGLYGLAHQQGIEALAILTVSDHCLTGEETTAEERQLSFNQMIELALHTAL
>NZ_CP007518.2|WP_025201373.1|4472609_4472990_-|hypothetical-protein
MKRIAILFGLLCGSVLLANPVFANDAAQLQCEAQAAAKKLNGAAKTSFVGKCVKDAAGAVSGECEKAAADKKLAGAAKNSFIQKCVKTGAAVDPAAKCEKAAADKKLAGAAKNSFVQKCVKDSAAK
>NZ_CP007518.2|WP_144439537.1|4473660_4474863_+|hypothetical-protein
MKKITQKQRERDVRRVLKQRFNFKRKNKQFRNDDSFVKHKRDVQWKELNAWINSEKNNGLSVKDCKTKRQKKQNMIAIELPQEMDFESNYDKTVQSLTAIRRLVELLDAYKGCKLPVRAYKIGTVIFDKLTKISTSAALVLTAEISKWDSSIIKRLKPQEDGWQENIYDNFFQLGFFELFENKPKKPHTGKNTPSHLNFVKYFKGDCSDSEKARKNKVELRTQISELVGSKVPKWTILHSGLSEAVTNVTHHAYPDNFEKNDKSWYLTGSYNTNTKEMMISFFDQGVGIPNSLPDSKIWEKVLSYFASTGVSIAEQKKHETLLKAAVSLDRTRTGQNDRGKGLQDLLEFIRQRAEGSLSIMSYHGAYECNVIAGKEHVSTASFSRPLCGTLITWCVTLND
>NZ_CP007518.2|WP_101531749.1|4474876_4475323_+|STAS-like-domain-containing-protein
MCTIYIGNQFHNDPSGRYYTDGDGSGEEFREEVLRPLLECKSIDKITINISRNVEGYGSSFLVEAFGGLIKYGYFKSNFVDNKIELSVDEEDLDDYSFYKDRILEYIRSAKFNSQKYISTKNKAIEEKTFKGIIDKTFVEGFIKNATK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007518_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007518_8

4628774-4628876

Orphan

Consensus_repeat	Method
CAGATCTGCCGGAGCTGGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007518_8

>merge|NZ_CP007518|8|4628774-4628876|CRISPRCasFinder
CAGATCTGCCGGAGCTGGGATGCACACGGCTGACGGCCAGGCAGCGTCAACATACCTTGTGCCAGTTGCGACGACTACGTCAGATCTGCCGGTGCTGGGATGC

>NZ_CP007518|8|7|4628774-4628876|CRISPRCasFinder
CAGATCTGCCGGAGCTGGGATGC	ACACGGCTGACGGCCAGGCAGCGTCAACATACCTTGTGCCAGTTGCGACGACTACGT
CAGATCTGCCGGTGCTGGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007518.2\|WP_010633232.1\|4632574_4633123_-\|hemerythrin	unknown	unknown	gnl\|CDD\|226454
NZ_CP007518.2\|WP_010633235.1\|4625776_4626763_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP007518.2\|WP_005298492.1\|4629044_4630487_-\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP007518.2\|WP_025201319.1\|4621463_4622966_-\|dipeptide/tripeptide-permease-DtpB	unknown	unknown	gnl\|CDD\|182306
NZ_CP007518.2\|WP_005298488.1\|4632340_4632523_+\|DUF3545-family-protein	unknown	unknown	gnl\|CDD\|371878
NZ_CP007518.2\|WP_005303321.1\|4617596_4618550_+\|glutathione-synthase	unknown	unknown	gnl\|CDD\|235371
NZ_CP007518.2\|WP_025201318.1\|4623521_4624664_-\|AQU-family-class-C-beta-lactamase	unknown	unknown	gnl\|CDD\|236894
NZ_CP007518.2\|WP_010633234.1\|4626749_4628723_+\|DUF3488-domain-containing-protein	unknown	unknown	gnl\|CDD\|378784
NZ_CP007518.2\|WP_025201317.1\|4624856_4625777_+\|AAA-domain-containing-protein	unknown	unknown	gnl\|CDD\|223786
NZ_CP007518.2\|WP_017781922.1\|4616818_4617550_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|224303
NZ_CP007518.2\|WP_010633230.1\|4635324_4636605_-\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|234968
NZ_CP007518.2\|WP_010633231.1\|4634813_4635194_+\|autonomous-glycyl-radical-cofactor-GrcA	unknown	unknown	gnl\|CDD\|213978
NZ_CP007518.2\|WP_005303327.1\|4620995_4621418_+\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|234639
NZ_CP007518.2\|WP_025201320.1\|4618650_4620276_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP007518.2\|WP_005298484.1\|4633280_4633949_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP007518.2\|WP_010633228.1\|4637940_4638741_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|225464
NZ_CP007518.2\|WP_005303325.1\|4620394_4620949_+\|YqgE/AlgH-family-protein	unknown	unknown	gnl\|CDD\|234694
NZ_CP007518.2\|WP_010633227.1\|4638752_4639136_-\|SirB2-family-protein	unknown	unknown	gnl\|CDD\|377264
NZ_CP007518.2\|WP_010633229.1\|4636912_4637767_-\|3-deoxy-8-phosphooctulonate-synthase	unknown	unknown	gnl\|CDD\|235363
NZ_CP007518.2\|WP_010633233.1\|4631229_4632180_+\|transaldolase	unknown	unknown	gnl\|CDD\|235381

Protein	Function_ID	Function_description	E-value
NZ_CP007518.2\|WP_010633232.1\|4632574_4633123_-\|hemerythrin	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	1.87443e-17
NZ_CP007518.2\|WP_010633235.1\|4625776_4626763_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	2.54786e-12
NZ_CP007518.2\|WP_005298492.1\|4629044_4630487_-\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NZ_CP007518.2\|WP_025201319.1\|4621463_4622966_-\|dipeptide/tripeptide-permease-DtpB	gnl\|CDD\|182306	PRK10207, PRK10207, dipeptide/tripeptide permease DtpB.	0
NZ_CP007518.2\|WP_005298488.1\|4632340_4632523_+\|DUF3545-family-protein	gnl\|CDD\|371878	pfam12065, DUF3545, Protein of unknown function (DUF3545). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 60 to 77 amino acids in length. This protein has two completely conserved residues (R and L) that may be functionally important.	1.10183e-10
NZ_CP007518.2\|WP_005303321.1\|4617596_4618550_+\|glutathione-synthase	gnl\|CDD\|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	0
NZ_CP007518.2\|WP_025201318.1\|4623521_4624664_-\|AQU-family-class-C-beta-lactamase	gnl\|CDD\|236894	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional.	0
NZ_CP007518.2\|WP_010633234.1\|4626749_4628723_+\|DUF3488-domain-containing-protein	gnl\|CDD\|378784	pfam11992, DUF3488, Domain of unknown function (DUF3488). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 323 to 339 amino acids in length. This domain is found associated with pfam01841. This domain has a conserved PLW sequence motif. This domain contains 6 transmembrane helices.	1.15009e-71
NZ_CP007518.2\|WP_025201317.1\|4624856_4625777_+\|AAA-domain-containing-protein	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	3.75264e-79
NZ_CP007518.2\|WP_017781922.1\|4616818_4617550_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|224303	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown].	8.88413e-98
NZ_CP007518.2\|WP_010633230.1\|4635324_4636605_-\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	0
NZ_CP007518.2\|WP_010633231.1\|4634813_4635194_+\|autonomous-glycyl-radical-cofactor-GrcA	gnl\|CDD\|213978	TIGR04365, Autonomous_glycyl_radical_cofactor, autonomous glycyl radical cofactor GrcA. This small protein, previously designated YfiD in E. coli, is closely homologous to pyruvate formate_lyase (PFL) in a region surrounding the stable glycyl radical that is prepared by the action of pyruvate formate-lyase activase, a radical SAM enzyme. When damage at the site of this radical breaks the main chain of PFL, this protein acts as a spare part that reintroduces the needed stable glycyl radical. Cutoffs for this model are set to exclude a set of closely related phage proteins that appear to have a corresponding function.	6.96902e-83
NZ_CP007518.2\|WP_005303327.1\|4620995_4621418_+\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	7.34491e-70
NZ_CP007518.2\|WP_025201320.1\|4618650_4620276_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.06007e-67
NZ_CP007518.2\|WP_005298484.1\|4633280_4633949_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	1.43295e-148
NZ_CP007518.2\|WP_010633228.1\|4637940_4638741_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|225464	COG2912, COG2912, Uncharacterized conserved protein [Function unknown].	1.93414e-56
NZ_CP007518.2\|WP_005303325.1\|4620394_4620949_+\|YqgE/AlgH-family-protein	gnl\|CDD\|234694	PRK00228, PRK00228, YqgE/AlgH family protein.	1.40078e-90
NZ_CP007518.2\|WP_010633227.1\|4638752_4639136_-\|SirB2-family-protein	gnl\|CDD\|377264	pfam04247, SirB, Invasion gene expression up-regulator, SirB. SirB up-regulates Salmonella typhimurium invasion gene transcription. It is, however, not essential for the expression of these genes. Its function is unknown.	2.93739e-25
NZ_CP007518.2\|WP_010633229.1\|4636912_4637767_-\|3-deoxy-8-phosphooctulonate-synthase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	0
NZ_CP007518.2\|WP_010633233.1\|4631229_4632180_+\|transaldolase	gnl\|CDD\|235381	PRK05269, PRK05269, transaldolase B; Provisional.	0

>NZ_CP007518.2|WP_010633234.1|4626749_4628723_+|DUF3488-domain-containing-protein
MLLDNRSLLPLLALLQLLLIPALWPQLQLWVMAVSLLALGVRAMMLWRGWRPPPAAVLALLAILGVALLGWQWRQLGTLPALINLLWLGYGLKLIEVRRERDVEQVLLLAFFLVALALVQRQSMSWALAMAGALWLAVTTLLAAVQPLGRRLWLRAGVTLLLAAPLLLTLFLLLPRLPPLWQMPSSNRALSGLSEEVAPGDISELVNSSELAFRISFASAPPLPQERYFPLMRQELFDGRRWLLSDEVRRWQQSQSVQTQPAANPTTPLPAGGYQVIAEPQRHRWTLALAAPEVLSGPVTLSPLATLYRRDRGDGRISYRVNTVAMAPSASQATRQLNLQLPAAGNPKARAHALMLKARHPAPEEFAAALLGEFRQGDFYYTLQPPRLGQDGVDDFLFESRRGFCGHYAMATAFVLRAAGIPARLVTGYLGGEWNPRGNYLEVHQFDAHAWVEYLDEQNRWQRLDPTAAVAPQRIEGGVPAALAGEFAAADPLSLQRYRNWALLNQLRWWGANLDYQWTRWVLNYDAANLWQQLGQRWPVLSGHTHWLILAALSGVATLVGGLLLWRGPTPARLRLWQPLRRRAARHGWQPLAGESLASWCERLADLRPLLARPLRQGAWLYRRWRYAPLSPTQRQRTLRQLRRRLRQICRRWDTHR
>NZ_CP007518.2|WP_010633235.1|4625776_4626763_+|DUF58-domain-containing-protein
MNWRQRRARWQQGWLARRIPPARQLALQGRCLFILPTRLGLCYLLVMLAIYLLGTNYQNNLVLLLAYGLGSLFMVTMWLTHRNLLGLALLGGPAVLGEVGSPLPMRITVRSERPLQALQFSLNEGRLWLAQVDAVPQPLLLPVLGTRRGRLPLERLRVESRYPLGLFRCWSLLDLQLEGWLAPAPAYGPLRGEAATDAAGNRGQPTPASMGDFDMLRAHQSGEPLSRVAWKQLAQGRGLLVKHFCEPGQDDTHLSLSRVGGQDLEARLAVLAWWCGDYAKRGIPFSLTLAGRTLGPDSGPAFLQRCQLALARLDAREQMQETDLDAAR
>NZ_CP007518.2|WP_025201317.1|4624856_4625777_+|AAA-domain-containing-protein
MQTQPQITRLLTALEQVILGKPLQLKIALVTLLARGHLLIEDLPGMGKTTLAHALAQVLGLDCRRVQFTADLLPADLLGLQIFDPQQQQFRFHPGPVFAQVLLADEINRASPKVQSALLEAMAEGKVSIEGQSHPLPFPFFVIATQNPADQSGTYPLPESQLDRFAVRLSLGFPTPEAERRLLRGASQSAPLERQLDAADLAALQAEAAQIHLADATLDYLLALVQQSRFDAELPQPLSPRAAQTLLAVSRAWALVAGRRFVSVEDVQAVFPYVAEHRLRGSFGVQRGEACPLSQRLLARVDPDRP
>NZ_CP007518.2|WP_025201318.1|4623521_4624664_-|AQU-family-class-C-beta-lactamase
MKQTSPLSLLALSALLLSPLTQAAPADPLVGVVDDVIRPLVKEHRIPGMAVAVFKEGQPHYFNYGVAELATGKKVSEQTLFEIGSVSKTLTATLGAYAVVKGSIGLDDKVSRHAPWLKGSAFDGITMVELATYSAGGLPLQFPDEVESLEQMQAYYRQWTPAYQPGSHRQYSNPSIGLFGYLAASSLQQPFAQLMEQTLLPGLGLHHTYINVPKQAMANYAYGYSKEDKPIRVTPGVLADEAYGIKTSSADLLAFVKANINGVDDKGLQQAIALTHQGHYSVGGMTQGLGWESYPYPVSEQVLLAGNSAQVIMKANPTTAAPKEMGSQRLFNKTGSTNGFGAYVAFVPAKGVGIVMLANRNYPIQERVKAAHAILSKLAP
>NZ_CP007518.2|WP_025201319.1|4621463_4622966_-|dipeptide/tripeptide-permease-DtpB
MRPSTPTGLLQQPKPFFMIFFVELWERFGYYGVQGLLAVFFVQQLGFSQEQSFITFGAFSALVYGLISVGGYVGDHILGTKRTMVLGAIVLVIGYFMTGMSIYNPDLIFYALGTIAVGNCLFKANPASLLAKCYEPGDPRLDGAFTLFYMSINVGSLISLSLAPVVADHYGYTVTYNLCGVGLVIALLTFFACRRMVKGIGSAPDHLPLDYGKLLLVLLGSVALVFFCAWLMHHVVIANMVLMTVTLAVVVFFFREAFKLDSVGRNKMYVAFVLMLEAVVFYVLYAQMPTSLNFFAINNMHHEMLGVTVNPVSFQALNPFWVVLGSPVLAMIYTRLGSQGRDLTMPLKFTLGMLFCSLGFLTAAASGIWFADAQGLTSPWFMVLIYLFQSLGELMISALGLAMVAALVPQRLMGFILGMWFLTQAMASLLGGYVATFTAVPQGVTDPLQTLPIYTDVFGKIGLVTLLVAGVMGLMVPWLNRMMQAGERHGEEGELSQAKA
>NZ_CP007518.2|WP_005303327.1|4620995_4621418_+|Holliday-junction-resolvase-RuvX
MSSRSIMGFDYGTKSIGVAIGQELTGTARPLRALKANDGIPNWDEIDKLLKEWQPDLLVVGLPLNMDGTEQEITVRARKFGNRLHGRFGKQVEFKDERLTTTDARARLFEQGGYRALEKGSVDGVSAQLILEAWMEEQYD
>NZ_CP007518.2|WP_005303325.1|4620394_4620949_+|YqgE/AlgH-family-protein
MQTLQNHFLLAMPSLTDPYFERSLVYLCEHNEEGAMGLVVNIPVDMSLETMLDQLKLAPPANPELKQPVLQGGPVHADRGFVLHSFRPGFNSTLQVGDELMVTTSKDILETLGTEEAPAHWLVALGYAGWSAGQLEQELVDGAWLVIPPNPDLVFKTPIHQRWQRAAASIGVNPVHLSSDIGHG
>NZ_CP007518.2|WP_025201320.1|4618650_4620276_-|methyl-accepting-chemotaxis-protein
MEGISIRQKLILGCVVPLLALLLLVIGATQAMSRLMTGINAMYQGEVVQLKELKQIADLYAVKVIDAANKANVGGFEPARSKADMSAAQQEIATIWRQYRSHDMSDEERRRADKVEALFTAANREIEKVMGLLEGSPGEHNAALAAAIMPLYQVIDPVSDAVSDQVAFQLQEAEENVAELNQLRQQLTQLFVVLFVVVGGCVLFIGIWAGRSVSQPLAAMGQILRGMQTDLDLSRLAPVLRKDEMGSLAHSLNEVIRHFRGLIAQINETAEQLARASAQLAHIGVESRQRFAQQQAETDQTATAMNQMSSTVAEVANSSNQAADAARHADDSARHGHQIVEDAIARMSHLSSQIQNTAAMITQLADDSRDIGSVMDAIRGIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRTLAQRTQRSTEEIGKTIVKLQQGANQAASSMEQGLEQVEESNRTVLACGQALGEIVSSVNVINEMNTQIATAAEEQSKVAEEITRNVVNIAHIATESTGAATQLNQNCHELEQLSGDLKEKVGQFRC
>NZ_CP007518.2|WP_005303321.1|4617596_4618550_+|glutathione-synthase
MTIKLGIVMDPISAINIKKDSSFAMLEEAQKRGYELFYLEMKDLYMEAGRAFGTMRPLTVKYDYADWYSLGEVVDQPLSSLDVILMRKDPPFDTEFIYATYMLERAEDEGCLIVNKPQSLRDANEKLYTAWFAEHTPTTLVTRRADKLRAFHAQHKDVILKPLDGMGGASIFRMKEDDANVGVIIETLTAHGSQYCMAQTYLPAIKDGDKRVLVVDGEPVPYCLARIPAQGETRGNLAAGGRGEARPLSEADWAIARAVGPTLKEKGLIFVGLDIIGDRLTEINVTSPTCIREIEAAFDVHITGMLMDAIERRLAKA
>NZ_CP007518.2|WP_017781922.1|4616818_4617550_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MRIPRIYEPAALQVGQTLALSEDGANHIGRVLRMQPGQQLELFNGDGNQYPATIANVGKKSVEVTIDSCEQRSVESPLAIHLGQVISRGDKMDFTIQKSVELGVTCITPLFSERCGVKLPADRLEKKREQWQKVVISACEQCGRNTVPEVRMPMELDAWLAEETQELKLNLHPRAPYSINTLPVPEHGVRLLIGPEGGLSSDEIARTVQEDFKEMLLGPRVLRTETAALTAITALQCRFGDLA
>NZ_CP007518.2|WP_005298492.1|4629044_4630487_-|alanine:cation-symporter-family-protein
MDTLIAMINDLMWGAVLIYLLIGVGIFFTFRLGFIQVRHFGHMFSVLRNSRKSDKAGISSFQALCTSLAARVGTGNLAGVAVAIYLGGPGAIFWMWLIAFIGMATAFVESTLAQLYKVKDEDGNYRGGPAYYMEKGLGMRWMGVLFSLCLILAFGLVFNAVQANSISLAMNVAFGIPDWVSGLALVVLSGLIIFGGIRGIARFAELVVPFMALAYILMALFVVLVNIHELPGVFSLIIKSALGLEQAGSGALGYAISQAMINGIKRGLFSNEAGMGSAPNAAATATPYPPHPASQGYVQMLGVFLDTIVICTCTAAIILMSGQFEPGSGITGVELTQRALSSQIGGGGNIFIAAAIFFFAFTSIVANYSYAETNLVFLEHNHKGGLMLFRLFVLGMVMFGSVGELPTVWAMADVSMGLMAIVNLVAILLLSGVAIKLAKDYNDQLKLGKLPTFDANKYPEIRSQLEEGIWDNPAQNSKQA
>NZ_CP007518.2|WP_010633233.1|4631229_4632180_+|transaldolase
MADKLTQLKALTTVVADTGDIEAIKRYQPIDATTNPSLVLKASEIPEYAALIEDAVTWAKAQSQDKAQQIIDAGDKLAVNIGLEVLKIVPGRISTEVDARLSFDTEASIAKARKLIRLYNDAGISNDRILIKLASTWEGIRAAEVLEKEGIQCNLTLLFSFAQARACAEAGAFLISPFVGRILDWYKAKNGRDYTASEDPGVVSVTSIYNYYKQHDYPTVVMGASFRNTGEILELAGCDRLTIGPALLEELSKAEGAVVRKLDYTGERKAKPTPMTEAEFRWELNQDAMAHEKLGEGIRMFAIDQGKLETMLASRL
>NZ_CP007518.2|WP_005298488.1|4632340_4632523_+|DUF3545-family-protein
MEMFNFDYEDVVELGSRSRGTTGKKRKWREIEALKDKHRLQKELQSIDIAYEGLSDEIEL
>NZ_CP007518.2|WP_010633232.1|4632574_4633123_-|hemerythrin
MLASLHKDHLNIARLLGLLKQKLTAIRSEERVSYFLIRDVVDYLREVSDKYHHPKEDIIYDYYLKYRVVEGDVANRLQLEHAKLVEAGAELREMVEMILMDAVIPLDQFTAKLEQFVALQEAHMNYEEGVIFPHLRDSLTEDDWRHLEQVWQNRAIGDPLFGPEISQHFQDLARRLSLPLSS
>NZ_CP007518.2|WP_005298484.1|4633280_4633949_-|uracil-DNA-glycosylase
MLTWTDVIGSEKEQDYFKATLATVRSEREAGKVIYPPATDVFNAFKLTELDQVKVVILGQDPYHGPNQAHGLCFSVLPGVRTPPSLVNIYKEMQRDLPGFVTPSHGFLESWATQGVLLLNTVLTVQAGQAHSHAHLGWETFTDRVIEQINASCQGVVFLLWGAHAQKKGRFIDRQRHHVLSAPHPSPLSAHRGFIGCGHFSETNRLLSQQGMSPINWHSVCE
>NZ_CP007518.2|WP_010633231.1|4634813_4635194_+|autonomous-glycyl-radical-cofactor-GrcA
MIKGIQITQSANAALLNSFWLLDEEKQQARCICAKGDAFAADQEVSVSDLGQFEYRELPVQAEPAVEGGQHLNVNVLRRETLEDAIANPEKYPQLTIRVSGYAVRFNALTPEQQRDVVTRTFTQSL
>NZ_CP007518.2|WP_010633230.1|4635324_4636605_-|dicarboxylate/amino-acid:cation-symporter
MQKKIVSSLYFQVLLAITLGVILGHIYPDLGADMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGKTGAIALLYFEVVSTIALIIGLCVVNLLQPGAGMNVDPATLDASAISAYAEQAKAQGIIPFLLDVIPGSVIGAFASGNILQVLLFAVLFGFSLHHIGEKGKVIFNVIDSFSQVIFGIINMIMRLAPVGAFGAMAFTIGKYGIGSLVQLGQLIACFYMTCLLFIFLVLGSIARSNGFSILRFISYIREELLIVLGTSSSESVLPRMLVKMEALGCKKSVVGLVIPTGYSFNLDGTSIYLTMAAIFIAQATNTPLDLFQQITLLVVLLISSKGAAGVTGSGFIVLAATISAVGHLPLAGLALILGIDRFMSEARALTNLIGNGVATLVVARYCDQLDEQQMHEALSNPPQAVKVDQH
>NZ_CP007518.2|WP_010633229.1|4636912_4637767_-|3-deoxy-8-phosphooctulonate-synthase
MEQKNIKVNSIDVANDKPFVLFGGMNVLESRDMAMAVCEKYVEVTSKLGIPFVFKASWDKANRSSIHSYRGPGLEEGMKIFQELKATFGMPVISDLHEPHQAKPVAEVVDVIQLPAFLARQTDLVEAMARTGNVINIKKPQFLSPSQMKNITDKFEECGNDRLILCERGVNFGYDNLVVDMLGLGVMKKSTGGYPVIFDVTHSLQCRDPMGAASGGRREQVAELARAGMAVGLAGLFIESHPDPKVARCDGPSALPLEKLEGFLKQMKAIDDLVKGFEPLDTSI
>NZ_CP007518.2|WP_010633228.1|4637940_4638741_-|tetratricopeptide-repeat-protein
MIRVDEWTDFEAHDIAELALSVSDEIHGISGRGTAELARLDAWLDEAIEEGDCDQVRRQLLQGFYQTLGFHGDWQDYFSVANCDLAQVLARKQGIPVSLGILIIQLGRKLGLDVEGICFPGHFLVSFAGSEGEVYVDPFTGDELSLHHIELLLRGALGNLATLSSDHLQPAGQWEIIERLLNVSKGALLREDRMTEALRCSELLLRMKPGDPLETRDRGFIYEQLDCPRFAADDFEYFIEQCPDDPVADVLKAQLAALDLSPKPLH
>NZ_CP007518.2|WP_010633227.1|4638752_4639136_-|SirB2-family-protein
MYFAIKHLHLLLIGLAVLMFMLRFYWLQTGSSRAASARTLRLSGWLNGLVVLSGVLLCMVLDLNPLNNATPWLSEKLTAILVVAFLAMMALRLARSNGIRWFAFLGALGWLFFIAKLAVYKQASLFG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007518_4	4.2\|2604322\|26\|NZ_CP007518\|CRT	2604322-2604347	26	MN693551	Marine virus AFVG_25M463, complete genome	4012-4037	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NC_015168	Bacteroides salanitronis DSM 18170 plasmid pBACSA02, complete sequence	16430-16455	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP021918	Sagittula sp. P11 plasmid unnamed6, complete sequence	35416-35441	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	49024-49049	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	49030-49055	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	254364-254389	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP042333	Bosea sp. F3-2 plasmid pB32-2, complete sequence	38451-38476	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	57371-57396	4	0.846
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010612	Phaeobacter inhibens strain P92 plasmid pP92_b, complete sequence	188223-188248	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NC_018291	Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence	177116-177141	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010596	Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence	178274-178299	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	174671-174696	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP031953	Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence	198525-198550	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NC_018421	Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence	198432-198457	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010760	Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence	45641-45666	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010600	Phaeobacter inhibens strain P83 plasmid pP83_a, complete sequence	188768-188793	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010603	Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence	45647-45672	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP031949	Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence	177117-177142	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010742	Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence	198365-198390	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010618	Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence	202477-202502	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP015043	Rhodovulum sp. P5 plasmid pRGUI04, complete sequence	30837-30862	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010726	Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence	188763-188788	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP020385	Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence	17147-17172	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010651	Phaeobacter inhibens strain P54 plasmid pP54_a, complete sequence	203825-203850	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010706	Phaeobacter inhibens strain P66 plasmid pP66_a, complete sequence	188768-188793	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010709	Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence	45642-45667	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010746	Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence	195881-195906	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP019308	Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-1, complete sequence	31899-31924	5	0.808
NZ_CP007518_4	4.4\|2604436\|26\|NZ_CP007518\|CRT	2604436-2604461	26	NZ_CP010736	Phaeobacter inhibens strain P72 plasmid pP72_a, complete sequence	188794-188819	5	0.808
NZ_CP007518_1	1.1\|149202\|31\|NZ_CP007518\|CRISPRCasFinder	149202-149232	31	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	673242-673272	10	0.677

1. spacer 4.2|2604322|26|NZ_CP007518|CRT matches to MN693551 (Marine virus AFVG_25M463, complete genome) position: , mismatch: 4, identity: 0.846

gaagggcaacggcaaggtacaggcca	CRISPR spacer
gaagggcatcggcaaggtaaaggcag	Protospacer
******** ********** **** .

2. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NC_015168 (Bacteroides salanitronis DSM 18170 plasmid pBACSA02, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tgtcggcgatggcaatctctccgcca	Protospacer
 ************.********** .

3. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP021918 (Sagittula sp. P11 plasmid unnamed6, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tggcggcgatggcgatctcgccgtgg	Protospacer
 * **************** ***.**

4. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
ggtcggcgatggtgatctcgccggcg	Protospacer
************.****** ***  *

5. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
ggtcggcgatggtgatctcgccggcg	Protospacer
************.****** ***  *

6. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
ggtcgccgatggcgacctctccggcg	Protospacer
***** *********.*******  *

7. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP042333 (Bosea sp. F3-2 plasmid pB32-2, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
gctcggcgttggcgatctttccgcga	Protospacer
* ****** *********.******.

8. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 4, identity: 0.846

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
ggtcggcgatggtgatctcgccggcg	Protospacer
************.****** ***  *

9. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010612 (Phaeobacter inhibens strain P92 plasmid pP92_b, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

10. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NC_018291 (Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

11. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010596 (Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

12. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tcacgccgatggcgatctctccgggg	Protospacer
   ** ***************** **

13. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP031953 (Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

14. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NC_018421 (Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

15. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010760 (Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
cttcgtcgatgccgatctctccgcgc	Protospacer
  *** ***** *************

16. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010600 (Phaeobacter inhibens strain P83 plasmid pP83_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

17. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010603 (Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
cttcgtcgatgccgatctctccgcgc	Protospacer
  *** ***** *************

18. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP031949 (Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

19. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010742 (Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

20. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010618 (Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

21. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP015043 (Rhodovulum sp. P5 plasmid pRGUI04, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tttcgtcgatggcgatctctccggga	Protospacer
  *** ***************** *.

22. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010726 (Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

23. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP020385 (Rhodovulum sp. MB263 plasmid pRSMBA, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
cgtcggcggtggcgatctcttcgccc	Protospacer
 *******.***********.***

24. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010651 (Phaeobacter inhibens strain P54 plasmid pP54_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

25. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010706 (Phaeobacter inhibens strain P66 plasmid pP66_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

26. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010709 (Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
cttcgtcgatgccgatctctccgcgc	Protospacer
  *** ***** *************

27. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010746 (Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

28. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP019308 (Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-1, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

29. spacer 4.4|2604436|26|NZ_CP007518|CRT matches to NZ_CP010736 (Phaeobacter inhibens strain P72 plasmid pP72_a, complete sequence) position: , mismatch: 5, identity: 0.808

ggtcggcgatggcgatctctccgcgg	CRISPR spacer
tacctgcgatggagatctctccgcgg	Protospacer
 ..* ******* *************

30. spacer 1.1|149202|31|NZ_CP007518|CRISPRCasFinder matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 10, identity: 0.677

tatcgcccgctctgagctcgctgctggtgcg	CRISPR spacer
ctccgcccgatctgagctcgctggtgaccgt	Protospacer
. .****** ************* **..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2009513 : 2019463

uncultured_Mediterranean_phage(25.0%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017764739.1\|2009513_2010260_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-70	54.5
WP_005309437.1\|2010264_2010882_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.0e-34	46.4
WP_025202186.1\|2010878_2011460_+	DedA family protein	NA	NA	NA	NA
WP_025202185.1\|2011469_2012525_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0A7NU10	Lactobacillus_phage	3.9e-13	41.8
WP_005309444.1\|2012572_2013556_+	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	2.2e-34	34.1
WP_010635011.1\|2013640_2014654_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.2e-107	58.3
WP_005309452.1\|2014833_2015049_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_010635010.1\|2015064_2015508_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	4.9e-26	48.6
WP_010635009.1\|2015596_2017384_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.3e-74	41.1
WP_080630672.1\|2017597_2019463_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-34	32.6

DBSCAN-SWA_2

2248226 : 2255520

Escherichia_phage(66.67%)

integrase

attL 2240529:2240544|attR 2264490:2264505

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2240529:2240544	attL	NA	NA	NA	NA
WP_025202139.1\|2248226_2249171_-	SDR family oxidoreductase	A0A1S7DLY8	Molluscum_contagiosum_virus	9.9e-08	26.8
WP_025202138.1\|2249206_2249980_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_010634854.1\|2250041_2250674_-	aldolase	A0A077SK32	Escherichia_phage	5.9e-73	65.5
WP_010634853.1\|2250666_2251917_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.4e-128	62.0
WP_010634852.1\|2251913_2252822_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.6e-108	71.3
WP_010634851.1\|2253077_2253878_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.5e-62	52.2
WP_081050834.1\|2254194_2255520_+\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	3.2e-28	27.8
2264490:2264505	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007518

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection