CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP012349	Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 chromosome, complete genome	3 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG	1	16	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP012349_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012349_1

931258-932141

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

14 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP012349_1

>merge|NZ_CP012349|1|931258-932141|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTGTCACAGGAGTGAACGAAATCAAGGGTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGACCAGACATGATGGTTCCCCCTCGATACACTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAACTGAGGAGCTCTGTTCTCGCGGCGCAGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGGGGTTATGAAGGATGACGCGATAACGGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTTTTCTAATTTGTGGGATGAATGGAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCCAGATATTGCTGACGCACCCAACCCATAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAACCGCCGTTTTCTCCACGATGTAGAGAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCATATTCCAGAAAACGCCTGGGTGATGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCCGAGTTTATTCAGCGTGTACAGGAAATGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGATCTAACGCCTGGCAATGATGGGATATAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGCGCCAGATTTTGGCGAGGTGATACAGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTATCGAAACCGCCAGCGCGCGAATGAATGCATGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCATAGCAGAACTGGAGGCGCGGACGGTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGATGTCTCTGTCACTGGCTTTAATCCAGCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP012349|1|1|931258-932080|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTCACAGGAGTGAACGAAATCAAGGGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCAGACATGATGGTTCCCCCTCGATACACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGAGGAGCTCTGTTCTCGCGGCGCAGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGGGGTTATGAAGGATGACGCGATAACGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTCTAATTTGTGGGATGAATGGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCCAGATATTGCTGACGCACCCAACCCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACCGCCGTTTTCTCCACGATGTAGAGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCATATTCCAGAAAACGCCTGGGTGATGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCCGAGTTTATTCAGCGTGTACAGGAAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGATCTAACGCCTGGCAATGATGGGATATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCGCCAGATTTTGGCGAGGTGATACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATCGAAACCGCCAGCGCGCGAATGAATGCATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATAGCAGAACTGGAGGCGCGGACGGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP012349|1|1|931258-932141|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTCACAGGAGTGAACGAAATCAAGGGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCAGACATGATGGTTCCCCCTCGATACACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGAGGAGCTCTGTTCTCGCGGCGCAGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGGGGTTATGAAGGATGACGCGATAACGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTCTAATTTGTGGGATGAATGGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCCAGATATTGCTGACGCACCCAACCCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACCGCCGTTTTCTCCACGATGTAGAGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCATATTCCAGAAAACGCCTGGGTGATGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCCGAGTTTATTCAGCGTGTACAGGAAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGATCTAACGCCTGGCAATGATGGGATATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCGCCAGATTTTGGCGAGGTGATACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATCGAAACCGCCAGCGCGCGAATGAATGCATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATAGCAGAACTGGAGGCGCGGACGGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGATGTCTCTGTCACTGGCTTTAATCCAGC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP012349|1|1|931258-932141|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGTCACAGGAGTGAACGAAATCAAGGGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCAGACATGATGGTTCCCCCTCGATACACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGAGGAGCTCTGTTCTCGCGGCGCAGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGGGGTTATGAAGGATGACGCGATAACGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTTTTCTAATTTGTGGGATGAATGGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCCAGATATTGCTGACGCACCCAACCCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACCGCCGTTTTCTCCACGATGTAGAGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCATATTCCAGAAAACGCCTGGGTGATGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCCGAGTTTATTCAGCGTGTACAGGAAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGATCTAACGCCTGGCAATGATGGGATATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCGCCAGATTTTGGCGAGGTGATACAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATCGAAACCGCCAGCGCGCGAATGAATGCATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCATAGCAGAACTGGAGGCGCGGACGGTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAGATGTCTCTGTCACTGGCTTTAATCCAGC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012349.1\|WP_001079649.1\|919804_920341_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP012349.1\|WP_053299937.1\|939717_942381_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012349.1\|WP_000210454.1\|926107_926908_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP012349.1\|WP_000832397.1\|920337_920808_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP012349.1\|WP_001199961.1\|930289_930961_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP012349.1\|WP_023201489.1\|937498_938233_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012349.1\|WP_000036734.1\|928855_930154_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP012349.1\|WP_023201492.1\|942392_943949_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012349.1\|WP_000178257.1\|920822_921329_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP012349.1\|WP_023201488.1\|935710_937423_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP012349.1\|WP_000206420.1\|944495_945554_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP012349.1\|WP_024146070.1\|938320_939274_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012349.1\|WP_000842511.1\|924913_925501_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP012349.1\|WP_000108313.1\|933125_933488_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP012349.1\|WP_023201486.1\|932238_933036_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP012349.1\|WP_023201487.1\|933911_935711_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP012349.1\|WP_077944678.1\|922134_924834_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP012349.1\|WP_001044458.1\|921348_922122_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP012349.1\|WP_000029528.1\|943945_944482_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012349.1\|WP_000210863.1\|927135_928773_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437

Protein	Function_ID	Function_description	E-value
NZ_CP012349.1\|WP_001079649.1\|919804_920341_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	6.42486e-119
NZ_CP012349.1\|WP_053299937.1\|939717_942381_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012349.1\|WP_000210454.1\|926107_926908_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.36327e-159
NZ_CP012349.1\|WP_000832397.1\|920337_920808_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	4.46838e-99
NZ_CP012349.1\|WP_001199961.1\|930289_930961_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP012349.1\|WP_023201489.1\|937498_938233_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.1022e-138
NZ_CP012349.1\|WP_000036734.1\|928855_930154_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP012349.1\|WP_023201492.1\|942392_943949_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP012349.1\|WP_000178257.1\|920822_921329_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	3.13856e-105
NZ_CP012349.1\|WP_023201488.1\|935710_937423_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP012349.1\|WP_000206420.1\|944495_945554_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.35751e-139
NZ_CP012349.1\|WP_024146070.1\|938320_939274_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012349.1\|WP_000842511.1\|924913_925501_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP012349.1\|WP_000108313.1\|933125_933488_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP012349.1\|WP_023201486.1\|932238_933036_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.23812e-102
NZ_CP012349.1\|WP_023201487.1\|933911_935711_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP012349.1\|WP_077944678.1\|922134_924834_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP012349.1\|WP_001044458.1\|921348_922122_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP012349.1\|WP_000029528.1\|943945_944482_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.35683e-23
NZ_CP012349.1\|WP_000210863.1\|927135_928773_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0

>NZ_CP012349.1|WP_001199961.1|930289_930961_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP012349.1|WP_000036734.1|928855_930154_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP012349.1|WP_000210863.1|927135_928773_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP012349.1|WP_000210454.1|926107_926908_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP012349.1|WP_000842511.1|924913_925501_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP012349.1|WP_077944678.1|922134_924834_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMNFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP012349.1|WP_001044458.1|921348_922122_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKAHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP012349.1|WP_000178257.1|920822_921329_-|fimbrial-protein
MTMLTRWKILVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTIGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP012349.1|WP_000832397.1|920337_920808_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGTEPAEGDFEAFATLQVDYQ
>NZ_CP012349.1|WP_001079649.1|919804_920341_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSKASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFSSTVTVNFEYQ
>NZ_CP012349.1|WP_023201486.1|932238_933036_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALIGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP012349.1|WP_000108313.1|933125_933488_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP012349.1|WP_023201487.1|933911_935711_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKRLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIDLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP012349.1|WP_023201488.1|935710_937423_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESSYLRGTIVEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP012349.1|WP_023201489.1|937498_938233_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP012349.1|WP_024146070.1|938320_939274_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKATVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012349.1|WP_053299937.1|939717_942381_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP012349.1|WP_023201492.1|942392_943949_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLTDENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNHTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGQNPDERLNKWQRELWLFARRYFDDHVFTNPYESSDLKRIMTTRKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP012349.1|WP_000029528.1|943945_944482_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSTTVNDACLSEGFRSLLMQTHTLWKIDGQEWRVTALALTAALAANVKAIDERQKFAAQLNGVMSELRFTRLCAVKTPDELLRQLRRAVKLSNGAVNLFSLAEDIFCWCREQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDTDNEQD
>NZ_CP012349.1|WP_000206420.1|944495_945554_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNKELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQQTDTASFDVMNQQGSMKDVLDFICA

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Crispr_ID: NZ_CP012349_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012349_2

948250-949560

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

21 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP012349_2

>merge|NZ_CP012349|2|948250-949560|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGCGGATGTCGTGAAAAAACTCAACGACGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTCAACTGGGGGGTGATCATTAACGCCGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAACCACGTGGCCGCGACGGGGTAAATAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAGTGAAAGTCCCGTAACTCCTAACCGCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAGGCGTGGAGCCTTGTCACTGGCCGTGAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGTAGGCGTGGAGCCTTGTCACTGGCCGTAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCATTGCGTCTTCCGTGTCGGACAGGTTGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATGGGGAATAAGTGGCGGGTAAATCAACTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCTTATAACCATCACCGCGTCCAACTGGAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCAGATCGCCGCCCGTATCGATGCCAACGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAATTTCGACAGTGAGCAGGCTATTTCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGGCGAACTGGTAGACGGTGAGCCGCTATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATTAATAACAGAAAATAAATAGCGAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGATAGGGATCGGTAACTTTGCCATCGATCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAAATCCATCCGCTACGAACCTGAAGAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCCAGTAATAAAAGAGGTGGTAGTAACGATGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAGTTCGCGCAGTGTTTCTGTGCAGGTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGACCGCAATAAAAATTTACACCGCCACACCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAACGAATTGAGACTATTAGAGATTATTCGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAACTGTATTTTGCGTTATTACGCTGAACCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGAAACAGAAACCGGATATGAGCCATCCATGTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP012349|2|2|948250-949560|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGCGGATGTCGTGAAAAAACTCAACGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCAACTGGGGGGTGATCATTAACGCCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAACCACGTGGCCGCGACGGGGTAAATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGTGAAAGTCCCGTAACTCCTAACCGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATTGCGTCTTCCGTGTCGGACAGGTTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGGGGAATAAGTGGCGGGTAAATCAACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTTATAACCATCACCGCGTCCAACTGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCAGATCGCCGCCCGTATCGATGCCAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAATTTCGACAGTGAGCAGGCTATTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGAACTGGTAGACGGTGAGCCGCTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAGGGATCGGTAACTTTGCCATCGATCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAATCCATCCGCTACGAACCTGAAGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCAGTAATAAAAGAGGTGGTAGTAACGATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGTTCGCGCAGTGTTTCTGTGCAGGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGCAATAAAAATTTACACCGCCACACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGTATTTTGCGTTATTACGCTGAACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP012349|2|2|948250-949560|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGCGGATGTCGTGAAAAAACTCAACGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCAACTGGGGGGTGATCATTAACGCCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAACCACGTGGCCGCGACGGGGTAAATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGTGAAAGTCCCGTAACTCCTAACCGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATTGCGTCTTCCGTGTCGGACAGGTTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGGGGAATAAGTGGCGGGTAAATCAACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTTATAACCATCACCGCGTCCAACTGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCAGATCGCCGCCCGTATCGATGCCAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAATTTCGACAGTGAGCAGGCTATTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGAACTGGTAGACGGTGAGCCGCTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAGGGATCGGTAACTTTGCCATCGATCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAATCCATCCGCTACGAACCTGAAGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCAGTAATAAAAGAGGTGGTAGTAACGATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGTTCGCGCAGTGTTTCTGTGCAGGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGCAATAAAAATTTACACCGCCACACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGTATTTTGCGTTATTACGCTGAACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP012349|2|2|948250-949560|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGCGGATGTCGTGAAAAAACTCAACGACGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCAACTGGGGGGTGATCATTAACGCCGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAAACCACGTGGCCGCGACGGGGTAAATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGTGAAAGTCCCGTAACTCCTAACCGCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTGAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTAGGCGTGGAGCCTTGTCACTGGCCGTAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCATTGCGTCTTCCGTGTCGGACAGGTTGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATGGGGAATAAGTGGCGGGTAAATCAACTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCTTATAACCATCACCGCGTCCAACTGGAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCAGATCGCCGCCCGTATCGATGCCAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAAATTTCGACAGTGAGCAGGCTATTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGGCGAACTGGTAGACGGTGAGCCGCTATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATTAATAACAGAAAATAAATAGCGAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGATAGGGATCGGTAACTTTGCCATCGATCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAATCCATCCGCTACGAACCTGAAGAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCCAGTAATAAAAGAGGTGGTAGTAACGATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGTTCGCGCAGTGTTTCTGTGCAGGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCGCAATAAAAATTTACACCGCCACACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAACTGTATTTTGCGTTATTACGCTGAACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGAAACAGAAACCGGATATGAGCCATCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012349.1\|WP_023201494.1\|946292_946943_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP012349.1\|WP_001518648.1\|947859_948153_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP012349.1\|WP_023201493.1\|945564_946311_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP012349.1\|WP_023201489.1\|937498_938233_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP012349.1\|WP_001219244.1\|955425_955905_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP012349.1\|WP_000134246.1\|955901_956951_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP012349.1\|WP_000144832.1\|946939_947860_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP012349.1\|WP_023201492.1\|942392_943949_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP012349.1\|WP_053299937.1\|939717_942381_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP012349.1\|WP_001118109.1\|953838_954195_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP012349.1\|WP_000517480.1\|954385_954697_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP012349.1\|WP_000206420.1\|944495_945554_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP012349.1\|WP_001221538.1\|956931_957693_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP012349.1\|WP_024146070.1\|938320_939274_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP012349.1\|WP_000372384.1\|950871_951780_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP012349.1\|WP_001173663.1\|953215_953821_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP012349.1\|WP_023201497.1\|951789_953229_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP012349.1\|WP_000741653.1\|954715_955426_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP012349.1\|WP_000029528.1\|943945_944482_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP012349.1\|WP_000490481.1\|949574_950621_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299

Protein	Function_ID	Function_description	E-value
NZ_CP012349.1\|WP_023201494.1\|946292_946943_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	2.94461e-76
NZ_CP012349.1\|WP_001518648.1\|947859_948153_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP012349.1\|WP_023201493.1\|945564_946311_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.13406e-48
NZ_CP012349.1\|WP_023201489.1\|937498_938233_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	5.1022e-138
NZ_CP012349.1\|WP_001219244.1\|955425_955905_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP012349.1\|WP_000134246.1\|955901_956951_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP012349.1\|WP_000144832.1\|946939_947860_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP012349.1\|WP_023201492.1\|942392_943949_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP012349.1\|WP_053299937.1\|939717_942381_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP012349.1\|WP_001118109.1\|953838_954195_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP012349.1\|WP_000517480.1\|954385_954697_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP012349.1\|WP_000206420.1\|944495_945554_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.35751e-139
NZ_CP012349.1\|WP_001221538.1\|956931_957693_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP012349.1\|WP_024146070.1\|938320_939274_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP012349.1\|WP_000372384.1\|950871_951780_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP012349.1\|WP_001173663.1\|953215_953821_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP012349.1\|WP_023201497.1\|951789_953229_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP012349.1\|WP_000741653.1\|954715_955426_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
NZ_CP012349.1\|WP_000029528.1\|943945_944482_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.35683e-23
NZ_CP012349.1\|WP_000490481.1\|949574_950621_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0

>NZ_CP012349.1|WP_001518648.1|947859_948153_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP012349.1|WP_000144832.1|946939_947860_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP012349.1|WP_023201494.1|946292_946943_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP012349.1|WP_023201493.1|945564_946311_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCVSGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP012349.1|WP_000206420.1|944495_945554_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNKELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQQTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP012349.1|WP_000029528.1|943945_944482_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSTTVNDACLSEGFRSLLMQTHTLWKIDGQEWRVTALALTAALAANVKAIDERQKFAAQLNGVMSELRFTRLCAVKTPDELLRQLRRAVKLSNGAVNLFSLAEDIFCWCREQDDLLSHHRRQQRPTEFLRIRWALEYYQAGDTDNEQD
>NZ_CP012349.1|WP_023201492.1|942392_943949_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLTDENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNHTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGQNPDERLNKWQRELWLFARRYFDDHVFTNPYESSDLKRIMTTRKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP012349.1|WP_053299937.1|939717_942381_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP012349.1|WP_024146070.1|938320_939274_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKATVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP012349.1|WP_023201489.1|937498_938233_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVVWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP012349.1|WP_000490481.1|949574_950621_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP012349.1|WP_000372384.1|950871_951780_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP012349.1|WP_023201497.1|951789_953229_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP012349.1|WP_001173663.1|953215_953821_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP012349.1|WP_001118109.1|953838_954195_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP012349.1|WP_000517480.1|954385_954697_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP012349.1|WP_000741653.1|954715_955426_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP012349.1|WP_001219244.1|955425_955905_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP012349.1|WP_000134246.1|955901_956951_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP012349.1|WP_001221538.1|956931_957693_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Crispr_ID: NZ_CP012349_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP012349_3

4104030-4104112

Orphan

Consensus_repeat	Method
AAAGGGTGATGCCAATGGCATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP012349_3

>merge|NZ_CP012349|3|4104030-4104112|CRISPRCasFinder
AAAGGGTGATGCCAATGGCATCACATAAATACCTATCAATCAGCCACCAATCAATAGGTAAAAAGGTGATGCCAATGGCATCA

>NZ_CP012349|3|3|4104030-4104112|CRISPRCasFinder
AAAGGGTGATGCCAATGGCATCA	CATAAATACCTATCAATCAGCCACCAATCAATAGGTA
AAAAGGTGATGCCAATGGCATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP012349.1\|WP_023202287.1\|4109250_4109949_+\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP012349.1\|WP_023202297.1\|4096761_4097136_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012349.1\|WP_023202292.1\|4102119_4102653_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012349.1\|WP_077944718.1\|4106914_4107343_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226075
NZ_CP012349.1\|WP_023202293.1\|4100506_4101640_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012349.1\|WP_023202294.1\|4099948_4100488_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP012349.1\|WP_023202296.1\|4097128_4098484_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP012349.1\|WP_023202286.1\|4109938_4110433_+\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP012349.1\|WP_023202282.1\|4112075_4112540_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163460
NZ_CP012349.1\|WP_023202283.1\|4111547_4111841_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225225
NZ_CP012349.1\|WP_023202291.1\|4102645_4103566_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP012349.1\|WP_000016244.1\|4093608_4093848_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	unknown	unknown	gnl\|CDD\|377822
NZ_CP012349.1\|WP_023202281.1\|4113147_4113798_+\|TIGR03759-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274770
NZ_CP012349.1\|WP_024146164.1\|4112532_4113141_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP012349.1\|WP_000254752.1\|4093960_4094209_-\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|226420
NZ_CP012349.1\|WP_023202284.1\|4110998_4111415_+\|DUF3577-domain-containing-protein	unknown	unknown	gnl\|CDD\|371899
NZ_CP012349.1\|WP_023202298.1\|4095880_4096765_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP012349.1\|WP_023202288.1\|4107719_4109018_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP012349.1\|WP_023202295.1\|4098480_4099965_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP012349.1\|WP_023202290.1\|4104220_4106533_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608

Protein	Function_ID	Function_description	E-value
NZ_CP012349.1\|WP_023202287.1\|4109250_4109949_+\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	1.3089e-91
NZ_CP012349.1\|WP_023202286.1\|4109938_4110433_+\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	7.87673e-48
NZ_CP012349.1\|WP_077944718.1\|4106914_4107343_+\|hypothetical-protein	gnl\|CDD\|226075	COG3545, COG3545, Predicted esterase of the alpha/beta hydrolase fold [General function prediction only].	4.60387e-18
NZ_CP012349.1\|WP_023202281.1\|4113147_4113798_+\|TIGR03759-family-integrating-conjugative-element-protein	gnl\|CDD\|274770	TIGR03759, conj_TIGR03759, integrating conjugative element protein, PFL_4693 family. Members of this protein family, such as model protein PFL_4693 from Pseudomonas fluorescens Pf-5, belong to extended genomic regions that appear to be spread by conjugative transfer. Most members have a predicted N-terminal signal sequence. The function is unknown. [Mobile and extrachromosomal element functions, Plasmid functions].	1.79421e-84
NZ_CP012349.1\|WP_023202294.1\|4099948_4100488_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	9.78045e-73
NZ_CP012349.1\|WP_023202296.1\|4097128_4098484_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP012349.1\|WP_023202282.1\|4112075_4112540_+\|hypothetical-protein	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	7.71277e-41
NZ_CP012349.1\|WP_023202283.1\|4111547_4111841_+\|hypothetical-protein	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	1.14602e-14
NZ_CP012349.1\|WP_023202291.1\|4102645_4103566_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.62635e-27
NZ_CP012349.1\|WP_000016244.1\|4093608_4093848_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	gnl\|CDD\|377822	pfam07362, CcdA, Post-segregation antitoxin CcdA. This family consists of several Enterobacterial post-segregation antitoxin CcdA proteins. The F plasmid-carried bacterial toxin, the CcdB protein, is known to act on DNA gyrase in two different ways. CcdB poisons the gyrase-DNA complex, blocking the passage of polymerases and leading to double-strand breakage of the DNA. Alternatively, in cells that overexpress CcdB, the A subunit of DNA gyrase (GyrA) has been found as an inactive complex with CcdB. Both poisoning and inactivation can be prevented and reversed in the presence of the F plasmid-encoded antidote, the CcdA protein.	1.19689e-24
NZ_CP012349.1\|WP_000254752.1\|4093960_4094209_-\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|226420	COG3905, COG3905, Predicted transcriptional regulator [Transcription].	1.78874e-06
NZ_CP012349.1\|WP_023202284.1\|4110998_4111415_+\|DUF3577-domain-containing-protein	gnl\|CDD\|371899	pfam12101, DUF3577, Protein of unknown function (DUF3577). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.	4.74331e-68
NZ_CP012349.1\|WP_023202298.1\|4095880_4096765_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	2.08643e-34
NZ_CP012349.1\|WP_023202288.1\|4107719_4109018_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.25617e-51
NZ_CP012349.1\|WP_023202295.1\|4098480_4099965_+\|hypothetical-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	7.57194e-130
NZ_CP012349.1\|WP_023202290.1\|4104220_4106533_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	5.05426e-62

>NZ_CP012349.1|WP_023202291.1|4102645_4103566_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MSKQVEFDELVEEAIRQGDLANLRPVVEKELLHYDILFCLSEAGLLKSLTFQGGTSLRLCYSSNRFSEDLDFAGGPDFCSVNLAQMKDCIEDYLGNRYGLEVTVKEPNELRAEPEYAEVKVDKWQISVTTAPERKDLPRQRIKIEVANIPAYTHTWRQLVRNYTVLPDGYSDTLIKVETLEEVMADKLVSFPATTNYIRYRDMWDLLWLKQQGAKIDVNLVSQKLKDYKIDDFKKNLQARIDSLPNIINEGNFHNEMKRFIPSSVYETSLGKEGFSSFLQDSLKNLLNQLRKELYAENDKTNSFQL
>NZ_CP012349.1|WP_023202292.1|4102119_4102653_+|hypothetical-protein
MDKLVAINTLDKFSHQGRYVFHFNDLKNMFSDESERTLKASLKRLVDTNILTRATQGVYVYNRAPKDSFILEHIAKTIRRGEYSYVSLESALSQYGVISQIPMDRLTVMTTGRGGEFKTPWGVIELTHTQRPVSDILNGTVDTKSPIKFAKKDTALRDLHRVGRNTHLIDTRELKNV
>NZ_CP012349.1|WP_023202293.1|4100506_4101640_+|hypothetical-protein
MTPYIQALINMTGDKLQQRMQKAPTAASDSLLFMGNQHDTVPRRLLHDPLLSPRDKFAWQVIRMQAQDNGGAVFPSYSELQVQLSNRPQDEKASRSTVSRALLMLRLTRWLSLCHKARDRVSGRILGNIYALHDEPLSVLDAVRFDASYLHLLEQCSRHENKAIRATAQGILYDIRQDTSLRYLSSRIELLEERARWQQRQSPEETKPETSGLNTVPGKISPGTESGLSRKPGPGGLVSNQDQASVRTVSTDICNSTTARANSSPPNWPPEIPLTHPEKQLVLQAMQNLPSPMRQDVLDDAAQRVARGGIQNPLAYLLATLRKAQEGEFNQYRRGKAAVPEFVPPVVSEPEIPAEPHKKRDISKLVAEIRAQCLGSG
>NZ_CP012349.1|WP_023202294.1|4099948_4100488_+|DUF2857-domain-containing-protein
MLPTINQAVLSQVIQALKDGNVRYCEALGFDREELNELNDLTFEELMHLGNTSAQFLKITINHDVLRKMLVQVRQEQKFQQLVGQAVQLGGSIALISHYFGISTAEISARRRLMGIHVRQGRNQVPGEEEEAALWNRWQEIKVDNIDSIPALEAMMLLAQERSLSLTVVWNLIRQWEKS
>NZ_CP012349.1|WP_023202295.1|4098480_4099965_+|hypothetical-protein
MNNKLTSTELQSRLLQGNFDRGRSPDERFADPLMETSMIVTLEQLRPYDLNPRLMRNPNYDDIKASILHRGLDTPPPITRRPDQEWFIIANGGNTRLSILNELWRETHDERFWRIQCLYKPWAGTSDQPMLGELRCLIGHLAENDLHGKLSFIERALGINKARELYQQVEECQLSQRELAEHLKNDGYPINQSHISRMEQALEYLLPSIPEVLYAGMGRSQVEKLLSLRAASLHLWQRHAAEDVGSFDNLFSSALSLFNDQPEDFAIERVQDELLGLMSQELNVDYNLLLLDVDPSEQKRQAVLGPTPEPPPYVPPEEPEPRPITRRRKPETEEEEVSAPAPLPEPEEAPSLLCEGTEPVTDIWRIPQLWDTTESLRSVSDRLAWDLAEHYAIDDRVISDTDINGIGFQVMPFASDHPMFTRPQSRACWALLAALNEIPLTEDLASALTPGLFFQRDADGFFFSDEFLIKAFRLIRIVRRIKEFQQEAQHAADD
>NZ_CP012349.1|WP_023202296.1|4097128_4098484_+|replicative-DNA-helicase
MSKRKRPQPPHSVEAEQSVLGGLMLDNDRWDDVATQISAQDFFISTHRTIYSHMQTLVEQGNPIDLITLSESLEQQEQLEQVGGFAYLAELSKNTPSTANIIPYAQYIASYGELRQLLLLGNELSDMAGQPRSNVADVLTFAEQKLFAIAQSHQDGGLTDINTCFDNVLAGIAQRYEAERGSLSGTPSGLEQLDALTCGFQPADLIIAAARPSVGKTAFALTLCVNALMLRPMQPVQIYSMEMSAEQLLLRLVSLIGHISQTRLRSGDLSDDDWQQIGVSASILMNEWKDRLLLDDSGILTPSLLRSRARRSLRQHGIPSLIVVDYLQLMRCGGSENRNQEISTISRSLKALAKELHCPVLALSQLNRALESRLNKRPCNADLRDSGSIEQDADVILFLYRDELYDPNTLDRGIAEVIVSKQRNGPIGTVRTRFISDQTRFESLSQQGVGS
>NZ_CP012349.1|WP_023202297.1|4096761_4097136_+|hypothetical-protein
MKRKIWRAFCSYYAQHPFEQDDEVIVFFEAADREEARETLPVLMSLLWHISPEKLDCYNLEDENELRDNSDLLTAPRDWPLFEIGWSNNKPLYSSDLPLLLLPPHQQTRLWEAFLACQEGNRDE
>NZ_CP012349.1|WP_023202298.1|4095880_4096765_+|ParA-family-protein
MKNADAHSLPTLIAAILSTKGGVAKTTDTANLGGYLADQGLKVLMIDADIRQPTLSSYYPLDNEAPGGIYELIAQNELDPAIIISHTSIPGLDIIISNDPRGELMSLLQAAPDGVIRLRHLIRQITGYDVILIDTIGARTIALEMVLLASDLIISPVLPEMLSAREFLRGTLQMYRDLQPFTRYGIPLPPLKAVINKLDHTNDAREIHHNLLQVLQHKQKEQELLVPAEILMTPVYASVAYRRAASLGMPVHRLDTSRARGRATPCAAETMRMLAEELFPQVLALPHQPVEGIA
>NZ_CP012349.1|WP_000254752.1|4093960_4094209_-|ribbon-helix-helix-protein,-CopG-family
MVSSAKQTISAQIPVELALAVENLAVELDRSKSWVIKEALLSMLAERERRHQSIQVGLADVDAGRVVSHSDMVDFDNRLKET
>NZ_CP012349.1|WP_000016244.1|4093608_4093848_-|type-II-toxin-antitoxin-system-CcdA-family-antitoxin
MSGMSVRHKKTVSVTLEPALLQQARDAGINLSAVLTAALKEEISATGVERWKAENRAGLQELNRITDEHGLLSDDYRTF
>NZ_CP012349.1|WP_023202290.1|4104220_4106533_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKLAPYLITLTLPFISLSARADYHTQINAGNSVSGDVVDGSKGNQHVYGTLTNSTITGPYAYSYVGDGGQTNHITVTDHGELFLEPGGSAYDTQVTADGDLQVNGYAENTYVDSGGLVYVNAGNNGVEDSDQGGQIVNTTVGAGGLVVNRYGIDTNTVIEAGGELDTGWNYPYEIRNTAISRDAVIQNGGIQQVSNGGTSENSRVDDGGTLIVTGTWHYNVVTDTQPSAWYRGTANDSAVYGTMQNQGGLDENTTVQSGGQYSLGGYGLSRHLTVAQGGSAQINDGALDSFWLYGLMNVSSQATLTGIGSVGSSGELVLNEGAKTSGLTVALDGVLSLQNSSDTSPHNYQIAGLEMNGGTVLFDPTAFATLSMETLSGNGNFWMNTNIAAQQGDMINVSGEANGDFGIWINDTGESPTDPQSLQVVQTGGGDAQFTLLNPNQQVDIGTWEYGLTPDGQGNWSLTPQATPTPSTEAVLAMANVAPTIFQAEASALQTRLDVTRSRPHQGELWVQALSNRFDVNRTGNAAYRQRLGGLMMGYDKNLPRQTGLLTLGIAGGYSRSDLDLANNSDGSVDSYSAALYASYYDQSRFWLDGMLKGNLFNQHLNARMSSGGHADGSYTIPGLGGGLVAGYDARFARTTLSPFVGFTGFISQSDNYWLSNGMQAHPGTAKSALGQVGFRMRQNMTTRHGTQFVPWLKVALEQEFVHNNPVRVNDDNFNNDIAGTRGSYQAGISATLTPHTHIYASINYEKGDGMESPWTGNAGFSYRF
>NZ_CP012349.1|WP_077944718.1|4106914_4107343_+|hypothetical-protein
MLSEWLAVLRDSVGKIDNKTWFVAHSLGCVTILRLLAQLTVNEMPAGIILVSGFNETLPIWRQHGLSEMDAFIYPPLEMGQIVNGVKHRYVIGSLNDTIVPTELTLKLSQQLNAPFYALPDSGHFLGDDGINELPLVLQLLT
>NZ_CP012349.1|WP_023202288.1|4107719_4109018_+|Fic-family-protein
MPIKRPPALVPFSELTGADLEAHQHYSRVTDDKGRYLPFDEFCRHTARGENVSIAWTITRRARDSAMQRIHYRNEAGEQAGFVLTPNIMSVCELVDKHATRLALKELTTRLRGAGKELTALSLEEPITSSQLEGANTTTLVARNMLESGRAPRTEDEHMIAGNARLMAEIPELIQEPLTPDLIRRFHAVGMGGINDEKYRPGEFRDTDDVVIADYDGNIVHQPPAAADLPERLQIVCDFVNDTGHYVHPLVKACILHFMIAHEHPFRDGNGRTSRGLFYWYMLKSGYDVFKYVSISHLLHTTPAKYAHSYQYTETDGMDLTYYLEYQTSIIHRAMTRLLQHVDDLVSRAARIDHFLYQSGSLSRLSGRQITLLNIILAEPGKKYSAASVAEMLGVSDNTARNDLRTLARENLLTEISENDQKTVYRVSQDLS
>NZ_CP012349.1|WP_023202287.1|4109250_4109949_+|TIGR03761-family-integrating-conjugative-element-protein
MSDYTFNMGPLRSAIHIQLHTHNATRLWTGRRAAENGPAPIIGMPRFIEILNQMRIAAEHNDPYADLWMLRMEEKLVQSRKLMQVMLDQAKAMFNELPEGIDIETCFNVQPARFPLFINAPLAYQGVYLLTDFDQLARQLLLASHIAVISRREMHNRLNNGATVIRSAFGLAQKYHGSGLTRQDFIDDTPQARAAIERLGPLPEAILSGKLRSSFSSPLPGKAENPGVADDE
>NZ_CP012349.1|WP_023202286.1|4109938_4110433_+|DUF3158-family-protein
MMNNPITGYQSLADEDYKMLAYVSSLKGLLKPFKSKGELELLESNARNVREMMEPLMQRLIQSARRYPVRQLPLIFTIGPAPSGANFLRWRNQQNNKSGTPAFCNLIGDPKIPQRARDALLEIERDRIVFNMQMSVLTFIIRQARECQEKMNQAEKLYQGQQNS
>NZ_CP012349.1|WP_023202284.1|4110998_4111415_+|DUF3577-domain-containing-protein
MNEKTYFNLYTSGLGYVNRVRTVTPKRGEPFLCCDIAALSGAADDVDYVRFDCKVTGSEARKLIARCEQAVNEKRKVLIHFRLGDLYVDMFTYSKGERKGETGVSLKARLLYIGLVKIDGEVVWQAGNQEAEAEADAA
>NZ_CP012349.1|WP_023202283.1|4111547_4111841_+|hypothetical-protein
MSVIYVVVLTYIKPLEEVDANIPEHVEWLKKGYADGVFLASGRRIPRNGGVILAKCDNIESLEERLSQDPFNKLNIAKTEIIPFDATMKSPLLENIF
>NZ_CP012349.1|WP_023202282.1|4112075_4112540_+|hypothetical-protein
MARTTGWVITLLMLGGCTVPQRPTVPAPKPATPPAPEVVRYDRYLLINTRPDEAQRNPLHQIVNINLPLNLKLTVGDAFTWLLKQSGYSLCVDDHPTQFLAGKPLPLSQYQLGPMRLEEALKTLAGPGWLMQTDVLNREVCFHLNTPGTGDHHA
>NZ_CP012349.1|WP_024146164.1|4112532_4113141_+|hypothetical-protein
MLKRLAYLTTASALLLLAAAMFWGFNRLNALTLAQQQTQRQMAQWHNQPQPDDNYREMEVAVKDITGRTEALAKQLNDAASAQTERLHPITEQLRVLEGQIQTLNTSYQHLQQQTATRSRAKAKRPVPSPLWAAKAPFSLISSEFRAGRQFAVIAPSGYRSLSQLQLVAPGDSVQGWQLLQLDGSHATFRKGGQRLTLNAGG
>NZ_CP012349.1|WP_023202281.1|4113147_4113798_+|TIGR03759-family-integrating-conjugative-element-protein
MRRYLLLCLLLLPLFASPQQTRIEEQAITHTQAQEWGLTDSEWQHYQQLRQGERGIWSPGLDPLTTLGVEANSDAERQRYAELLARKEHQRVEKELAFQRAYDQAWKRLYPTLTPIRSVVQPRLALFVSEKCPACETLAQKLINDDRPLDIWLVNSRNDDASLQRWAQRQHIDMRKVERGQITLNHDNGRWQRLGGGKLPLLLEQQGEQWRPVSAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP012349_1	1.4\|931470\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931470-931501	32	NZ_CP012349.1	3367641-3367672	2	0.938

1. spacer 1.4|931470|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to position: 3367641-3367672, mismatch: 2, identity: 0.938

gaggggttatgaaggatgacgcgataacggag	CRISPR spacer
gagatgttatgaaggatgacgcgataacggag	Protospacer
***. ***************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	KU927493	Salmonella phage 118970_sal3, complete genome	22402-22433	1	0.969
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	KU927493	Salmonella phage 118970_sal3, complete genome	61993-62024	1	0.969
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	JQ288021	Salmonella phage SPN3UB, complete genome	37863-37894	2	0.938
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MH370364	Salmonella phage S107, complete genome	31464-31495	2	0.938
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MH370382	Salmonella phage S135, complete genome	31464-31495	2	0.938
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MH370383	Salmonella phage S137, complete genome	31464-31495	2	0.938
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_013059	Salmonella phage c341, complete genome	23093-23124	3	0.906
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	FJ000341	Salmonella phage g341c, complete genome	23093-23124	3	0.906
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_047875	Salmonella phage UPF_BP1, complete genome	35708-35739	4	0.875
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MW013502	Salmonella virus L cI-40 13-am43, complete genome	24611-24642	5	0.844
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_004348	Enterobacteria phage ST64T, complete genome	7797-7828	5	0.844
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MW013503	Salmonella virus L cII-101, complete genome	24611-24642	5	0.844
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_018275	Salmonella phage vB_SemP_Emek, complete genome	24777-24808	5	0.844
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	7797-7828	5	0.844
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MF188997	Salmonella phage vB_SalP_PM43, complete genome	7797-7828	5	0.844
NZ_CP012349_2	2.21\|949500\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949500-949531	32	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	1984-2015	5	0.844
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010149	Escherichia coli strain D6 plasmid A, complete sequence	119865-119896	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_KP763470	Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence	44506-44537	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP009168	Escherichia coli 1303 plasmid p1303_95, complete sequence	68075-68106	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP041922	Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence	61961-61992	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	36116-36147	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_MH844525	Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence	7885-7916	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MG197996	Escherichia phage APC_JM3.2, complete genome	31342-31373	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MN187550	Escherichia phage phiv142-3, complete genome	28098-28129	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	879850-879881	6	0.812
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	AP013529	Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C13	28182-28213	6	0.812
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP022193	Yangia pacifica strain YSBP01 plasmid unnamed3, complete sequence	147417-147448	6	0.812
NZ_CP012349_2	2.21\|949500\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949500-949531	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	328890-328921	6	0.812
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP026494	Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence	45712-45743	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_KU664810	Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence	19112-19143	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_KY007017	Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence	19112-19143	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	KR827684	Escherichia coli plasmid pCERC3, complete sequence	20389-20420	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_KP119165	Escherichia coli strain QT598 plasmid pEC598, complete sequence	53830-53861	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_KP398867	Escherichia coli strain DB04277 plasmid pDB4277, complete sequence	1977-2008	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010147	Escherichia coli strain D5 plasmid B, complete genome	75306-75337	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010232	Escherichia coli strain S30 plasmid A, complete sequence	129129-129160	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_AP017611	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence	27733-27764	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010158	Escherichia coli strain D10 plasmid A, complete genome	106719-106750	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP043952	Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence	19687-19718	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010141	Escherichia coli strain D3 plasmid A, complete sequence	58013-58044	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP049349	Escherichia coli strain 3R plasmid p3R-1, complete sequence	103085-103116	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP038182	Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence	85648-85679	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP021087	Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence	34094-34125	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP053732	Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence	25280-25311	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP020546	Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence	46254-46285	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP043737	Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence	95838-95869	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP010316	Escherichia coli strain 789 plasmid pAPEC-O78-ColV	5578-5609	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LS992167	Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence	69050-69081	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019282	Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence	55622-55653	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP034739	Escherichia coli strain L65 plasmid pL65-2, complete sequence	53704-53735	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP054369	Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence	52102-52133	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP048296	Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence	108396-108427	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019251	Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence	62190-62221	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP021728	Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence	72213-72244	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP005931	Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence	49145-49176	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP026854	Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence	85073-85104	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019247	Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence	55432-55463	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019268	Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence	53419-53450	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP029243	Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence	114657-114688	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CM019851	Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence	36307-36338	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP049355	Escherichia coli strain T28R plasmid pT28R-2, complete sequence	29837-29868	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP033091	Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence	34235-34266	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	LT906556	Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I	25840-25871	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP032263	Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence	106356-106387	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP027357	Escherichia coli strain 2013C-4991 plasmid unnamed2	38926-38957	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019018	Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence	37732-37763	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019007	Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence	83389-83420	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP011916	Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence	68772-68803	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019456	Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence	60414-60445	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP018994	Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence	137844-137875	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP047878	Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence	34230-34261	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP046718	Escherichia coli strain T16R plasmid pT16R-2, complete sequence	32415-32446	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP041303	Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence	80412-80443	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_011964	Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence	45154-45185	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP012636	Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence	58114-58145	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP022731	Escherichia coli strain SA186 plasmid pSA186_2, complete sequence	78297-78328	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP022732	Escherichia coli strain SA186 plasmid pSA186_3, complete sequence	51203-51234	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LT985319	Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII	91235-91266	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_AP019676	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence	34308-34339	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_024956	Escherichia coli strain K-12 plasmid pDM0133, complete sequence	11814-11845	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_025179	Escherichia coli plasmid pC59-153, complete sequence	17858-17889	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP042897	Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence	69295-69326	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP051689	Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence	40514-40545	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP012377	Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence	25755-25786	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	KU932025	Escherichia coli plasmid pEC14I, complete sequence	59794-59825	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_025175	Escherichia coli plasmid pH2332-166, complete sequence	108111-108142	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_025139	Escherichia coli plasmid pH2291-144, complete sequence	55380-55411	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LS992172	Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence	23770-23801	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP041301	Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence	64366-64397	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP054455	Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence	34211-34242	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP022166	Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence	48665-48696	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP047577	Escherichia coli strain 94EC plasmid p94EC-1, complete sequence	135008-135039	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	KU578032	Escherichia coli plasmid pCERC4, complete sequence	19112-19143	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP026643	Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence	36525-36556	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP042586	Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence	34230-34261	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP023363	Escherichia coli strain 144 plasmid 134q, complete sequence	1586-1617	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP023367	Escherichia coli strain 1428 plasmid p111, complete sequence	31774-31805	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP023384	Escherichia coli strain 1223 plasmid p147, complete sequence	40259-40290	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_010409	Escherichia coli plasmid pVM01, complete sequence	51610-51641	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP043743	Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence	92667-92698	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	MN419430	Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence	144746-144777	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP020934	Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence	14793-14824	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LR025097	Escherichia coli isolate EC-7215 plasmid 2, complete sequence	96783-96814	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_011980	Escherichia coli chi7122 plasmid pAPEC-1, complete sequence	9908-9939	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP030791	Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence	39860-39891	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP053282	Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence	38678-38709	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_020271	Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence	105768-105799	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	MN848327	Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence	59961-59992	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	MN823988	Escherichia coli strain 14406 plasmid p14406-FII, complete sequence	58080-58111	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LR740777	Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908	41984-42015	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP047667	Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence	98510-98541	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP041299	Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence	104166-104197	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP031107	Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence	145376-145407	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LR740759	Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202	60668-60699	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP012113	Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence	129984-130015	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP019055	Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence	55977-56008	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP048026	Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence	67157-67188	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP029744	Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence	75175-75206	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	LC484363	Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence	66361-66392	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP041920	Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence	16487-16518	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP051224	Escherichia coli strain SCZE5 plasmid pSCZE2	29840-29871	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_007675	Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence	148977-149008	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_018954	Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence	126559-126590	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_018966	Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence	125750-125781	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP014489	Escherichia coli strain G749 plasmid pG749_1, complete sequence	107995-108026	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP027485	Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence	110445-110476	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP024140	Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence	11159-11190	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_011747	Escherichia coli S88 plasmid pECOS88, complete sequence	101722-101753	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP049102	Escherichia coli strain EC28 plasmid p2, complete sequence	35498-35529	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_017659	Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence	9906-9937	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP026940	Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence	34235-34266	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP042245	Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence	188994-189025	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP025403	Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence	100796-100827	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_LT985293	Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence	150676-150707	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	MN807689	Escherichia coli strain A241 plasmid pA241-TEM, complete sequence	20393-20424	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK430046	Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence	80391-80422	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK461929	Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence	34265-34296	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK416151	Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence	27242-27273	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK461928	Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence	34264-34295	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK878891	Escherichia coli strain J53 plasmid pMG336, complete sequence	100856-100887	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MK878890	Escherichia coli strain J53 plasmid pMG337, complete sequence	101317-101348	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MN053930	Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence	19116-19147	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MH422552	Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence	78590-78621	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MH580302	Escherichia coli strain 1107 plasmid p1107-118K, complete sequence	22383-22414	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP006635	Escherichia coli PCN033 plasmid p3PCN033, complete sequence	118672-118703	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MG014722	Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence	210116-210147	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MF474175	Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence	95457-95488	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MG825372	Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence	40752-40783	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	125785-125816	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MG825378	Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence	140007-140038	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MF174860	Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence	41127-41158	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MG385063	Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence	165380-165411	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MG838205	Escherichia coli strain 92944 plasmid p92944-mph, complete sequence	47335-47366	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_MH195200	Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence	72068-72099	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP025329	Escherichia coli strain ExPEC XM plasmid unnamed	19689-19720	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_023327	Escherichia coli ACN001 plasmid pACN001-B, complete sequence	19689-19720	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	CP043741	Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence	36685-36716	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	MN816372	Escherichia coli strain A130 plasmid pA130-TEM, complete sequence	16506-16537	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NC_009837	Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence	115461-115492	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP035549	Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_89, complete sequence	81523-81554	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP021729	Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence	53845-53876	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP011430	Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_89, complete sequence	8706-8737	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP032492	Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_91, complete sequence	83311-83342	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP032497	Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_75, complete sequence	8706-8737	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP047663	Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence	64147-64178	7	0.781
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MF356679	Escherichia phage D6, complete genome	82418-82449	7	0.781
NZ_CP012349_1	1.14\|932081\|32\|NZ_CP012349\|CRISPRCasFinder,CRT	932081-932112	32	MK047642	Phage NG55, complete genome	36262-36293	7	0.781
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	201310-201341	7	0.781
NZ_CP012349_2	2.17\|949256\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949256-949287	32	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	156719-156750	7	0.781
NZ_CP012349_1	1.8\|931714\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931714-931745	32	NZ_CP054364	Escherichia coli strain SCU-171 plasmid pSCU-171-1, complete sequence	31682-31713	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP009051	Escherichia coli NCCP15648 plasmid p15648-1, complete sequence	84068-84099	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP040920	Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence	85301-85332	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP023961	Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence	62280-62311	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	113220-113251	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_MN101851	Escherichia coli strain 13ZX28 plasmid p13ZX28-90, complete sequence	89829-89860	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_MN101855	Escherichia coli strain 13ZX36 plasmid p13ZX36-90, complete sequence	90723-90754	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	53411-53442	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_042128	Escherichia phage RCS47, complete genome	93017-93048	8	0.75
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG796347	Uncultured bacterium plasmid pRGI00606	2978-3009	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KC691254	Mycobacterium phage Breezona, complete genome	59132-59163	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MF140422	Mycobacterium phage Nicholasp3, complete genome	58616-58647	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MN586052	Mycobacterium phage Kahlid, complete genome	58534-58565	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MK937600	Mycobacterium phage Wigglewiggle, complete genome	58692-58723	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MN586030	Mycobacterium phage BobsGarage, complete genome	59132-59163	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_023732	Mycobacterium phage Rumpelstiltskin, complete genome	58409-58440	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MN703406	Mycobacterium phage Gabriela, complete genome	58115-58146	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MF324910	Mycobacterium phage GuuelaD, complete genome	58728-58759	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MH834600	Mycobacterium phage BigCheese, complete genome	59132-59163	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_031124	Mycobacterium phage Gardann, complete genome	58616-58647	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KC661276	Mycobacterium phage Winky, complete genome	59132-59163	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_022071	Mycobacterium phage Crossroads, complete genome	58844-58875	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MN096380	Mycobacterium phage Lewan, complete genome	58768-58799	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MF185730	Mycobacterium phage Miley16, complete genome	59132-59163	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KX580962	Mycobacterium phage Wilder, complete genome	58534-58565	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KU997639	Mycobacterium phage Loadrie, complete genome	58936-58967	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KX580961	Mycobacterium phage Zakai, complete genome	59177-59208	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MN703410	Mycobacterium phage Itos, complete genome	57675-57706	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MH779511	Mycobacterium phage LilDestine, complete genome	58445-58476	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_015584	Mycobacterium virus Faith1, complete genome	58769-58800	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	KU234099	Mycobacterium phage MkaliMitinis3, complete genome	58899-58930	8	0.75
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP024309	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence	48825-48856	8	0.75
NZ_CP012349_2	2.13\|949011\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949011-949042	32	CP031285	Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence	27675-27706	8	0.75
NZ_CP012349_2	2.13\|949011\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949011-949042	32	NZ_CP022502	Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence	37114-37145	8	0.75
NZ_CP012349_2	2.13\|949011\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949011-949042	32	KF929199	Staphylococcus phage vB_SepS_SEP9, complete genome	33690-33721	8	0.75
NZ_CP012349_2	2.16\|949195\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949195-949226	32	JN371769	Synechococcus phage metaG-MbCM1, complete genome	15464-15495	8	0.75
NZ_CP012349_2	2.17\|949256\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949256-949287	32	NC_008713	Paenarthrobacter aurescens TC1 plasmid pTC2, complete sequence	282511-282542	8	0.75
NZ_CP012349_1	1.4\|931470\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931470-931501	32	MH976515	Gordonia phage Octobien14, complete genome	66906-66937	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NZ_CP034163	Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence	81999-82030	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG792102	Escherichia phage P13803, complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG803184	Escherichia phage P13353 complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	KU298437	Escherichia phage phiON-2011, complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG803185	Escherichia phage P13357 complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HE664024	Escherichia phage P13374 complete proviral genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG792104	Escherichia phage P13771, complete genome	6776-6807	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG792105	Escherichia phage P14437, complete genome	6749-6780	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG792103	Escherichia phage P8983, complete genome	6627-6658	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG803182	Escherichia phage P13363 complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_028660	Escherichia phage phi191, complete genome	27653-27684	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	HG803183	Escherichia phage P13368 complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	NC_018846	Escherichia phage P13374, complete genome	6225-6256	9	0.719
NZ_CP012349_1	1.13\|932020\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	932020-932051	32	MK356558	Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence	7893-7924	9	0.719
NZ_CP012349_2	2.1\|948279\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948279-948310	32	NC_009928	Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence	234567-234598	9	0.719
NZ_CP012349_2	2.1\|948279\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948279-948310	32	MK016501	Mycobacterium phage Nebkiss, complete genome	30020-30051	9	0.719
NZ_CP012349_2	2.8\|948706\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948706-948737	32	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	63020-63051	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP013109	Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence	206128-206159	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP023072	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence	527330-527361	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP021815	Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence	72315-72346	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	184417-184448	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP023065	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence	516270-516301	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	MN693257	Marine virus AFVG_25M21, complete genome	38682-38713	9	0.719
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	MG945559	UNVERIFIED: Microviridae sp. isolate 3243-1602, complete genome	4316-4347	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	86119-86150	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	86124-86155	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	86101-86132	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP053444	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eB, complete sequence	153002-153033	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NC_010865	Sinorhizobium meliloti plasmid pSmeSM11b, complete sequence	6335-6366	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	86100-86131	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP021216	Sinorhizobium meliloti RU11/001 plasmid pSmeRU11d, complete sequence	18299-18330	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	NZ_CP013539	Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence	320503-320534	9	0.719
NZ_CP012349_2	2.12\|948950\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948950-948981	32	MT522004	Mycobacterium phage Gail, complete genome	4076-4107	9	0.719
NZ_CP012349_2	2.13\|949011\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949011-949042	32	NC_024355	Staphylococcus phage 6ec, complete genome	39415-39446	9	0.719
NZ_CP012349_2	2.20\|949439\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949439-949470	32	NZ_CP021438	Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence	72349-72380	9	0.719
NZ_CP012349_2	2.21\|949500\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949500-949531	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1929932-1929963	9	0.719
NZ_CP012349_2	2.21\|949500\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949500-949531	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1709399-1709430	9	0.719
NZ_CP012349_1	1.5\|931531\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931531-931562	32	NZ_AF135182	Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence	25162-25193	10	0.688
NZ_CP012349_1	1.5\|931531\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	931531-931562	32	NC_002523	Serratia entomophila plasmid pADAP, complete sequence	25162-25193	10	0.688
NZ_CP012349_2	2.3\|948401\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948401-948432	32	NZ_CP023066	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence	29139-29170	10	0.688
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	NZ_CP050090	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence	175439-175470	10	0.688
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	MT104473	Pseudomonas phage MR13, complete genome	46685-46716	10	0.688
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	MT104475	Pseudomonas phage MR15, complete genome	50557-50588	10	0.688
NZ_CP012349_2	2.10\|948828\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	948828-948859	32	KJ507100	Pseudomonas phage phiPSA1, complete genome	50300-50331	10	0.688
NZ_CP012349_2	2.15\|949134\|32\|NZ_CP012349\|PILER-CR,CRISPRCasFinder,CRT	949134-949165	32	NZ_CP016451	Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence	214838-214869	11	0.656

1. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggacggtcaa	Protospacer
***************************** **

2. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggacggtcaa	Protospacer
***************************** **

3. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 2, identity: 0.938

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggaaggtcaa	Protospacer
************************* *** **

4. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 2, identity: 0.938

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggaaggtcaa	Protospacer
************************* *** **

5. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 2, identity: 0.938

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggaaggtcaa	Protospacer
************************* *** **

6. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 2, identity: 0.938

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcggaaggtcaa	Protospacer
************************* *** **

7. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_013059 (Salmonella phage c341, complete genome) position: , mismatch: 3, identity: 0.906

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cacatagcagaactggaggcgcggaaggtcaa	Protospacer
*.*********************** *** **

8. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to FJ000341 (Salmonella phage g341c, complete genome) position: , mismatch: 3, identity: 0.906

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cacatagcagaactggaggcgcggaaggtcaa	Protospacer
*.*********************** *** **

9. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_047875 (Salmonella phage UPF_BP1, complete genome) position: , mismatch: 4, identity: 0.875

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcgggatgtcaa	Protospacer
************************.  ** **

10. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

11. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

12. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

13. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_018275 (Salmonella phage vB_SemP_Emek, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

14. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

15. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 5, identity: 0.844

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgggtggcagaactggaggcgcggaaggtcaa	Protospacer
** .*.******************* *** **

16. spacer 2.21|949500|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 5, identity: 0.844

gcagaaacagaaaccggatatgagcc-atccat	CRISPR spacer
gaagagacagaaaccggctatgagctgatcca-	Protospacer
* ***.*********** *******. *****

17. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010149 (Escherichia coli strain D6 plasmid A, complete sequence) position: , mismatch: 6, identity: 0.812

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacactggcagaaaacgcctgggtgatggtc	Protospacer
 * *.*.*  ********************.**

18. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggcgcgagaaataaa	Protospacer
***********************.. ..*.**

19. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009168 (Escherichia coli 1303 plasmid p1303_95, complete sequence) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcgcgggaaataaa	Protospacer
*****************.******. ..*.**

20. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041922 (Escherichia coli strain Ec40743 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcgcgggaaataaa	Protospacer
*****************.******. ..*.**

21. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcgcgggaaataaa	Protospacer
*****************.******. ..*.**

22. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH844525 (Escherichia coli strain SCEC128 plasmid pSCEC128, complete sequence) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaataaa	Protospacer
******************* ****. ..*.**

23. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MG197996 (Escherichia phage APC_JM3.2, complete genome) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcgcgggaaataaa	Protospacer
*****************.******. ..*.**

24. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN187550 (Escherichia phage phiv142-3, complete genome) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaataaa	Protospacer
******************* ****. ..*.**

25. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcgga-cggtgaa	CRISPR spacer
cgcatagcagaactcgaggcgcagatcaatgc-	Protospacer
************** *******.** *..**

26. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to AP013529 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C13) position: , mismatch: 6, identity: 0.812

cgcatagcagaactggaggcgcgga-cggtgaa	CRISPR spacer
cgcattgcagaacttgaggcgcgggtccgcga-	Protospacer
***** ******** *********. * *.**

27. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022193 (Yangia pacifica strain YSBP01 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
acccagatcgccgcccgtatcgagggcggcgc	Protospacer
** ******************** * *..**

28. spacer 2.21|949500|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 6, identity: 0.812

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
tgacgaacagaaaccggatatgaggcatccct	Protospacer
  * .******************* ***** *

29. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026494 (Escherichia coli strain HS13-1 plasmid pHS13-1-IncF, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

30. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU664810 (Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

31. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY007017 (Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

32. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KR827684 (Escherichia coli plasmid pCERC3, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

33. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP119165 (Escherichia coli strain QT598 plasmid pEC598, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

34. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP398867 (Escherichia coli strain DB04277 plasmid pDB4277, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

35. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010147 (Escherichia coli strain D5 plasmid B, complete genome) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

36. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010232 (Escherichia coli strain S30 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

37. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

38. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010158 (Escherichia coli strain D10 plasmid A, complete genome) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

39. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043952 (Escherichia coli strain ST95-32 plasmid pST95-32-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

40. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

41. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049349 (Escherichia coli strain 3R plasmid p3R-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

42. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038182 (Escherichia coli strain 2 HS-C plasmid p2HS-C-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

43. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021087 (Escherichia coli strain 13P460A plasmid p13P460A-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

44. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053732 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

45. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020546 (Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

46. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP043737 (Escherichia coli strain CVM N17EC0616 plasmid pN17EC0616-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

47. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010316 (Escherichia coli strain 789 plasmid pAPEC-O78-ColV) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

48. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS992167 (Escherichia coli isolate Escherichia coli str. TO6 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

49. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019282 (Escherichia coli strain 13P484A plasmid p13P484A-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

50. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034739 (Escherichia coli strain L65 plasmid pL65-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

51. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054369 (Escherichia coli strain SCU-115 plasmid pSCU-115-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

52. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048296 (Escherichia coli strain CVM N18EC0432 plasmid pN18EC0432-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

53. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019251 (Escherichia coli strain 13KWH46 plasmid p13KWH46-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

54. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021728 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

55. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005931 (Escherichia coli APEC IMT5155 plasmid p1ColV5155, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

56. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026854 (Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

57. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019247 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

58. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019268 (Escherichia coli strain 13C1079T plasmid p13C1079T-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

59. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029243 (Escherichia coli strain ECCRA-119 plasmid pTB201, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

60. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CM019851 (Escherichia coli strain CVM N17EC0326 plasmid pN17EC0326-1, complete sequence, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

61. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049355 (Escherichia coli strain T28R plasmid pT28R-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

62. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033091 (Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

63. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to LT906556 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: I) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

64. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032263 (Escherichia coli strain AR_0089 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

65. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027357 (Escherichia coli strain 2013C-4991 plasmid unnamed2) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

66. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019018 (Escherichia coli strain Ecol_244 plasmid pEC244_2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

67. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019007 (Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

68. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011916 (Escherichia coli strain PSUO2 plasmid pPSUO2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

69. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019456 (Escherichia coli strain FHI_NMBU_03 plasmid pFHI_NMBU_03_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

70. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018994 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

71. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047878 (Escherichia coli strain LD22-1 plasmid pLD22-1-135kb, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

72. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046718 (Escherichia coli strain T16R plasmid pT16R-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

73. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041303 (Escherichia coli strain MSHS 133 plasmid pCys-11, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

74. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_011964 (Escherichia coli plasmid pAPEC-O103-ColBM, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

75. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012636 (Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

76. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022731 (Escherichia coli strain SA186 plasmid pSA186_2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

77. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022732 (Escherichia coli strain SA186 plasmid pSA186_3, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

78. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985319 (Escherichia coli strain ECOR 30 genome assembly, plasmid: RCS96_pII) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

79. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019676 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

80. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_024956 (Escherichia coli strain K-12 plasmid pDM0133, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

81. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_025179 (Escherichia coli plasmid pC59-153, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

82. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP042897 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_01, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

83. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051689 (Escherichia coli strain SCU-387 plasmid pSCU-387-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

84. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012377 (Escherichia coli strain GE3 isolate human faeces plasmid pGE3, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

85. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU932025 (Escherichia coli plasmid pEC14I, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

86. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_025175 (Escherichia coli plasmid pH2332-166, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

87. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_025139 (Escherichia coli plasmid pH2291-144, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

88. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LS992172 (Escherichia coli isolate Escherichia coli str. TO73 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

89. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041301 (Escherichia coli strain MSHS 472 plasmid pCys-6, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

90. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP054455 (Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

91. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022166 (Escherichia coli strain M160133 plasmid pM160133_p2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

92. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047577 (Escherichia coli strain 94EC plasmid p94EC-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

93. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU578032 (Escherichia coli plasmid pCERC4, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

94. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026643 (Escherichia coli strain FORC_082 plasmid pFORC82_2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

95. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042586 (Escherichia coli strain LD91-1 plasmid pLD91-1-146kb, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

96. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023363 (Escherichia coli strain 144 plasmid 134q, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

97. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023367 (Escherichia coli strain 1428 plasmid p111, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

98. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023384 (Escherichia coli strain 1223 plasmid p147, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

99. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_010409 (Escherichia coli plasmid pVM01, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

100. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP043743 (Escherichia coli strain CVM N17EC0211 plasmid pN17EC0211, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

101. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN419430 (Escherichia coli strain 2016-4017437 plasmid p17437, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

102. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020934 (Escherichia coli strain HB-Coli0 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

103. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR025097 (Escherichia coli isolate EC-7215 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

104. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_011980 (Escherichia coli chi7122 plasmid pAPEC-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

105. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030791 (Escherichia coli strain APEC O2-211 plasmid pAPEC-O2-211A-ColV, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

106. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053282 (Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

107. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_020271 (Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

108. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN848327 (Escherichia coli strain T16RC plasmid pT16RC-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

109. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN823988 (Escherichia coli strain 14406 plasmid p14406-FII, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

110. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR740777 (Escherichia coli strain BEN2908 isolate 1 day old chicken plasmid pAPEC2908) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

111. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047667 (Escherichia coli strain LD26-1 plasmid pLD26-1-135kb, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

112. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041299 (Escherichia coli O1:H42 strain CLSC36 plasmid pCys-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

113. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

114. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR740759 (Escherichia coli strain BEN5202 isolate laying hen 51 weeks old plasmid paAPEC5202) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

115. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012113 (Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

116. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

117. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048026 (Escherichia coli strain GZEC065 plasmid pTEM1-GZEC065, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

118. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029744 (Escherichia coli strain AR_0085 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

119. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to LC484363 (Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

120. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041920 (Escherichia coli strain Ec40743 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

121. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051224 (Escherichia coli strain SCZE5 plasmid pSCZE2) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

122. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_007675 (Escherichia coli A2363 plasmid pAPEC-O2-ColV, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

123. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_018954 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

124. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_018966 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

125. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014489 (Escherichia coli strain G749 plasmid pG749_1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

126. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP027485 (Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

127. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024140 (Escherichia coli strain 14EC020 plasmid p14EC020b, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

128. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_011747 (Escherichia coli S88 plasmid pECOS88, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

129. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049102 (Escherichia coli strain EC28 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

130. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_017659 (Escherichia coli O83:H1 str. NRG 857C plasmid pO83_CORR, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

131. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026940 (Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

132. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042245 (Escherichia coli strain PU-1 plasmid pColV-PU1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

133. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025403 (Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

134. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985293 (Escherichia coli strain 4410-1 plasmid RCS79_p, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

135. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN807689 (Escherichia coli strain A241 plasmid pA241-TEM, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

136. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK430046 (Escherichia coli strain 11.4-R4 plasmid pCERC13, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

137. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK461929 (Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

138. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK416151 (Escherichia coli strain 6TC9eCTX plasmid pHNTC9e, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

139. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK461928 (Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

140. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK878891 (Escherichia coli strain J53 plasmid pMG336, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

141. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK878890 (Escherichia coli strain J53 plasmid pMG337, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

142. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN053930 (Escherichia coli strain 2.3-R4 plasmid pCERC14, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

143. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH422552 (Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

144. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH580302 (Escherichia coli strain 1107 plasmid p1107-118K, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

145. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006635 (Escherichia coli PCN033 plasmid p3PCN033, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

146. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG014722 (Escherichia coli strain P2-3 plasmid pP2-3T, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

147. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF474175 (Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

148. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG825372 (Escherichia coli strain 1106 plasmid p1106-IncFIB, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

149. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

150. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG825378 (Escherichia coli strain 1108 plasmid p1108-IncFIB, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

151. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF174860 (Escherichia coli strain 6/14/6b plasmid pIncF-MU4, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

152. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG385063 (Escherichia coli strain WF5-29 plasmid pWF5-29, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

153. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG838205 (Escherichia coli strain 92944 plasmid p92944-mph, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

154. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH195200 (Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

155. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025329 (Escherichia coli strain ExPEC XM plasmid unnamed) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

156. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_023327 (Escherichia coli ACN001 plasmid pACN001-B, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

157. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP043741 (Escherichia coli strain CVM N17EC0320 plasmid pN17EC0320-2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

158. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN816372 (Escherichia coli strain A130 plasmid pA130-TEM, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

159. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_009837 (Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctgggtgatggtc	Protospacer
 * *...*  ********************.**

160. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035549 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_89, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

161. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021729 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-3, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

162. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011430 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU39 isolate YUHS 05-78 plasmid pYU39_89, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

163. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032492 (Salmonella enterica subsp. enterica serovar Typhimurium strain SL26 plasmid pSL26_91, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

164. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032497 (Salmonella enterica subsp. enterica serovar Typhimurium strain SO21 plasmid pSO21_75, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

165. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047663 (Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

166. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 7, identity: 0.781

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgggaaataaa	Protospacer
*****************.**.***. ..*.**

167. spacer 1.14|932081|32|NZ_CP012349|CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 7, identity: 0.781

cgagatgtctctgtcactggctttaatccagc	CRISPR spacer
gctaatgtctctgtcattggcttttatccaac	Protospacer
   .************.******* *****.*

168. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 7, identity: 0.781

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctctggaactggttgacggggagccgctcgta	Protospacer
**   ******** ***** ********  **

169. spacer 2.17|949256|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 7, identity: 0.781

--ccgagttcgcgcagtgtttctgtgcaggtatt	CRISPR spacer
agccaa--tcgcgcaatgtttctgcgcaggtgtg	Protospacer
  **.*  *******.********.******.*

170. spacer 1.8|931714|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054364 (Escherichia coli strain SCU-171 plasmid pSCU-171-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcatatt-ccagaaaacgcctgggtgatgatc	CRISPR spacer
-tgacgctggcagaaaacgcctggttgatggtc	Protospacer
 * *...*  ************** *****.**

171. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009051 (Escherichia coli NCCP15648 plasmid p15648-1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcgcgggaaatact	Protospacer
*****************.******. ..*.

172. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040920 (Escherichia coli strain FC853_EC plasmid p853EC1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

173. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023961 (Escherichia coli strain FDAARGOS_448 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

174. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

175. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101851 (Escherichia coli strain 13ZX28 plasmid p13ZX28-90, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

176. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN101855 (Escherichia coli strain 13ZX36 plasmid p13ZX36-90, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

177. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

178. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_042128 (Escherichia phage RCS47, complete genome) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaggagcgggaaatact	Protospacer
******************* ****. ..*.

179. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG796347 (Uncultured bacterium plasmid pRGI00606) position: , mismatch: 8, identity: 0.75

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
agcaggcaagaacgggaggcgcggacgatgat	Protospacer
 *** .  ***** *************.***

180. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KC691254 (Mycobacterium phage Breezona, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

181. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MF140422 (Mycobacterium phage Nicholasp3, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

182. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN586052 (Mycobacterium phage Kahlid, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

183. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MK937600 (Mycobacterium phage Wigglewiggle, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

184. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN586030 (Mycobacterium phage BobsGarage, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

185. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_023732 (Mycobacterium phage Rumpelstiltskin, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

186. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN703406 (Mycobacterium phage Gabriela, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

187. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MF324910 (Mycobacterium phage GuuelaD, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

188. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH834600 (Mycobacterium phage BigCheese, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

189. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_031124 (Mycobacterium phage Gardann, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

190. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KC661276 (Mycobacterium phage Winky, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

191. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_022071 (Mycobacterium phage Crossroads, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

192. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN096380 (Mycobacterium phage Lewan, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

193. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MF185730 (Mycobacterium phage Miley16, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

194. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KX580962 (Mycobacterium phage Wilder, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

195. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU997639 (Mycobacterium phage Loadrie, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

196. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KX580961 (Mycobacterium phage Zakai, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

197. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN703410 (Mycobacterium phage Itos, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

198. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH779511 (Mycobacterium phage LilDestine, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

199. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_015584 (Mycobacterium virus Faith1, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

200. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU234099 (Mycobacterium phage MkaliMitinis3, complete genome) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagc----cgctatta	CRISPR spacer
ctggcgaacaggtagaccgtgagcgcggcccc----	Protospacer
********* ******* ******    * *.

201. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024309 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3b, complete sequence) position: , mismatch: 8, identity: 0.75

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
cgctggaactggttgacggggagccgctcgta	Protospacer
*    ******** ***** ********  **

202. spacer 2.13|949011|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to CP031285 (Escherichia fergusonii strain 40A plasmid p46_40A, complete sequence) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaacttaatagcagaaaataaatatcgtgaca	Protospacer
. * ******.************* ** *. *

203. spacer 2.13|949011|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022502 (Salmonella enterica subsp. enterica serovar Kentucky str. SA20030505 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaacttaatagcagaaaataaatatcgtgaca	Protospacer
. * ******.************* ** *. *

204. spacer 2.13|949011|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KF929199 (Staphylococcus phage vB_SepS_SEP9, complete genome) position: , mismatch: 8, identity: 0.75

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
gaaattagtaaaagaaaataaataggagagat	Protospacer
* *****.*** ************* ...**

205. spacer 2.16|949195|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to JN371769 (Synechococcus phage metaG-MbCM1, complete genome) position: , mismatch: 8, identity: 0.75

ggccagtaa------taaaagaggtggtagtaacgatg	CRISPR spacer
------taaaaaatctaacagaggtggtagtaaagatg	Protospacer
      ***      *** ************** ****

206. spacer 2.17|949256|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_008713 (Paenarthrobacter aurescens TC1 plasmid pTC2, complete sequence) position: , mismatch: 8, identity: 0.75

ccgagttcgcgcagtgtttctgtgcaggtatt	CRISPR spacer
ccgagttcgcgcagggtttcggtgattcgact	Protospacer
************** ***** ***     *.*

207. spacer 1.4|931470|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MH976515 (Gordonia phage Octobien14, complete genome) position: , mismatch: 9, identity: 0.719

gaggggttatgaaggatgacgcgataacggag	CRISPR spacer
tgggggttatcgaggatgacgcgatacttgct	Protospacer
 .******** .************** . *

208. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034163 (Escherichia albertii strain 06-3542 plasmid p06-3542, complete sequence) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

209. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG792102 (Escherichia phage P13803, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

210. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG803184 (Escherichia phage P13353 complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

211. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KU298437 (Escherichia phage phiON-2011, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

212. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG803185 (Escherichia phage P13357 complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

213. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HE664024 (Escherichia phage P13374 complete proviral genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

214. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG792104 (Escherichia phage P13771, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

215. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG792105 (Escherichia phage P14437, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

216. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG792103 (Escherichia phage P8983, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

217. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG803182 (Escherichia phage P13363 complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

218. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_028660 (Escherichia phage phi191, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

219. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to HG803183 (Escherichia phage P13368 complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

220. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_018846 (Escherichia phage P13374, complete genome) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcattgcagaactggaagcgcgggaaatact	Protospacer
***** ***********.******. ..*.

221. spacer 1.13|932020|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MK356558 (Salmonella sp. strain Sa1423 plasmid pSa1423-160k, complete sequence) position: , mismatch: 9, identity: 0.719

cgcatagcagaactggaggcgcggacggtgaa	CRISPR spacer
cgcatagcagaactggaagcacgaggaagtaa	Protospacer
*****************.**.**.. ..  **

222. spacer 2.1|948279|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_009928 (Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence) position: , mismatch: 9, identity: 0.719

caggcggatgtcgtgaaaaaactcaacgacgc	CRISPR spacer
taggcggatgtcgggaataaactcctctgagg	Protospacer
.************ *** ******  * . *

223. spacer 2.1|948279|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 9, identity: 0.719

caggcggatgtcgtgaaaaaactcaacgacgc	CRISPR spacer
gatccagatgtcgtgaaaaagatcaacgaaat	Protospacer
 *  *.**************. ******* ..

224. spacer 2.8|948706|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 9, identity: 0.719

caatggggaataagtggcgggtaaatcaactt	CRISPR spacer
ataaagtgaatatgtgccgggtaaatcaacaa	Protospacer
  * .* ***** *** *************

225. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013109 (Sinorhizobium americanum strain CFNEI 73 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cagcagatcgccggccgtatcaatgaacccgg	Protospacer
  *********** *******.***    **.

226. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023072 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666a, complete sequence) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cggcagatcgccgcccgtctcaatgagctcgg	Protospacer
  **************** **.***    **.

227. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021815 (Sinorhizobium meliloti strain M270 plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cggcagatcgccgcccgtctcaatgaactcgg	Protospacer
  **************** **.***    **.

228. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cggcagatcgccgcccgtctcaatgagctcgg	Protospacer
  **************** **.***    **.

229. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023065 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631a, complete sequence) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cggcagatcgccgcccgtctcaatgagctcgg	Protospacer
  **************** **.***    **.

230. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MN693257 (Marine virus AFVG_25M21, complete genome) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
aagcagatcgccgtccgtatcaatgagcatac	Protospacer
* ***********.*******.***   *..

231. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MG945559 (UNVERIFIED: Microviridae sp. isolate 3243-1602, complete genome) position: , mismatch: 9, identity: 0.719

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
agccagatcgccgccagtatccatgctgcagc	Protospacer
*  ************ ***** ****..  *

232. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

233. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

234. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

235. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053444 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eB, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

236. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_010865 (Sinorhizobium meliloti plasmid pSmeSM11b, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

237. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

238. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021216 (Sinorhizobium meliloti RU11/001 plasmid pSmeRU11d, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
ctggcgaactggtcgacgctgagcaaatggcg	Protospacer
************* **** ***** . *. ..

239. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013539 (Rhizobium phaseoli strain R630 plasmid pRphaR630b, complete sequence) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
tcgagcaactggaagacgctgagccgctaatc	Protospacer
..*.  ****** ***** ********** *

240. spacer 2.12|948950|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MT522004 (Mycobacterium phage Gail, complete genome) position: , mismatch: 9, identity: 0.719

ctggcgaactggtagacggtgagccgctatta	CRISPR spacer
agcgtgaacgggtagaccgtgagccgctcctt	Protospacer
   *.**** ******* ********** .*

241. spacer 2.13|949011|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 9, identity: 0.719

gcaattaataacagaaaataaatagcgaggaa	CRISPR spacer
aaaattagtaaaagaaaataaataggaggggt	Protospacer
. *****.*** ************* ..**.

242. spacer 2.20|949439|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021438 (Bacillus thuringiensis strain C15 plasmid pBMB172, complete sequence) position: , mismatch: 9, identity: 0.719

caactgtattttgcgttattacgctgaaccag	CRISPR spacer
aatacatattttccgttattaccctgaacaaa	Protospacer
 *  ..****** ********* ****** *.

243. spacer 2.21|949500|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
ggtcacccagaaaccggaaatgagccagccga	Protospacer
*   *  *********** ******** **.

244. spacer 2.21|949500|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcagaaacagaaaccggatatgagccatccat	CRISPR spacer
ggtcacccagaaaccggaaatgagccagccga	Protospacer
*   *  *********** ******** **.

245. spacer 1.5|931531|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AF135182 (Serratia entomophila strain A1MO2 plasmid pADAP, complete sequence) position: , mismatch: 10, identity: 0.688

gatttttctaatttgtgggatgaatggaaaaa	CRISPR spacer
ggcacggtcaatttctgggatgaatggcaaaa	Protospacer
*.. .  ..***** ************ ****

246. spacer 1.5|931531|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NC_002523 (Serratia entomophila plasmid pADAP, complete sequence) position: , mismatch: 10, identity: 0.688

gatttttctaatttgtgggatgaatggaaaaa	CRISPR spacer
ggcacggtcaatttctgggatgaatggcaaaa	Protospacer
*.. .  ..***** ************ ****

247. spacer 2.3|948401|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023066 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631d, complete sequence) position: , mismatch: 10, identity: 0.688

gcaaaaccacgtggccgcgacggggtaaataa	CRISPR spacer
atttcgacccgtgaccgcgacggggtgaataa	Protospacer
..   . * ****.************.*****

248. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050090 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence) position: , mismatch: 10, identity: 0.688

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
ttcgagatcgccggcggtatcgatgccggccg	Protospacer
 .  ********* * ***********..* .

249. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MT104473 (Pseudomonas phage MR13, complete genome) position: , mismatch: 10, identity: 0.688

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cgacagatcgccgccgatatcgatgctggtgg	Protospacer
  .************ .*********....*.

250. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to MT104475 (Pseudomonas phage MR15, complete genome) position: , mismatch: 10, identity: 0.688

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cgacagatcgccgccgatatcgatgctggtgg	Protospacer
  .************ .*********....*.

251. spacer 2.10|948828|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to KJ507100 (Pseudomonas phage phiPSA1, complete genome) position: , mismatch: 10, identity: 0.688

acgcagatcgccgcccgtatcgatgccaacga	CRISPR spacer
cgacagatcgccgccgatatcgatgctggtgg	Protospacer
  .************ .*********....*.

252. spacer 2.15|949134|32|NZ_CP012349|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016451 (Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence) position: , mismatch: 11, identity: 0.656

tgaaatccatccgctacgaacctgaagaaaaa	CRISPR spacer
ggaaagccatccgctacgaacgtgccattctc	Protospacer
 **** *************** **  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1653791 : 1662962

Enterobacteria_phage(66.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1653791_1654739_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
WP_000824854.1\|1654722_1655454_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1655434_1655542_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1655601_1656333_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1656555_1658241_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1658237_1658957_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950422.1\|1659003_1659471_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.1e-73	89.7
WP_001265351.1\|1659527_1660058_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1660229_1660688_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195334.1\|1660928_1662962_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_2

1737833 : 1748339

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023201601.1\|1737833_1739237_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
WP_000981469.1\|1739414_1740308_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697846.1\|1740684_1741770_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
WP_001023664.1\|1741769_1742669_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000857535.1\|1742716_1743595_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
WP_000973709.1\|1743595_1744147_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
WP_000018226.1\|1744152_1745145_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648783.1\|1745141_1745915_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565903.1\|1745919_1746999_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
WP_000126349.1\|1747025_1748339_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_3

1964609 : 1998197

Enterobacteria_phage(20.69%)

integrase,tail,tRNA

attL 1963068:1963082|attR 1982199:1982213

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1963068:1963082	attL	NA	NA	NA	NA
WP_000004540.1\|1964609_1965716_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000476064.1\|1965769_1966231_-	NUDIX hydrolase	NA	NA	NA	NA
WP_000825956.1\|1966242_1966572_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_001249415.1\|1966568_1967234_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_000444509.1\|1967405_1968656_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	92.6
WP_000741321.1\|1968757_1969900_-\|integrase	tyrosine-type recombinase/integrase	O21929	Phage_21	1.4e-173	80.0
WP_023201644.1\|1969889_1970126_-	excisionase	NA	NA	NA	NA
WP_000069466.1\|1970175_1970679_-	hypothetical protein	A0A075B8H2	Enterobacteria_phage	6.0e-36	92.3
WP_000066251.1\|1970675_1971008_-	hypothetical protein	S4TNP2	Salmonella_phage	8.8e-20	81.8
WP_001126032.1\|1971356_1972187_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.0e-104	72.0
WP_023201651.1\|1972179_1974870_-	exodeoxyribonuclease VIII	Q9QF34	Lambdoid_phage	5.4e-115	74.9
WP_000799627.1\|1975010_1975346_-	hypothetical protein	NA	NA	NA	NA
WP_000682660.1\|1975421_1975628_-	cell division inhibitor protein	I6PBM9	Cronobacter_phage	3.0e-10	45.6
WP_000103933.1\|1975631_1975907_-	hypothetical protein	NA	NA	NA	NA
WP_001669535.1\|1976168_1976483_+	hypothetical protein	NA	NA	NA	NA
WP_001224472.1\|1976937_1977363_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	1.2e-13	56.3
WP_001033909.1\|1977459_1977714_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
WP_001533160.1\|1977700_1978195_+	hypothetical protein	NA	NA	NA	NA
WP_023201653.1\|1978241_1979249_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	1.7e-122	67.3
WP_157872077.1\|1979160_1979703_+	replication protein	A0A0U2JGJ0	Escherichia_phage	7.1e-67	74.8
WP_023201654.1\|1979716_1980112_+	DUF977 family protein	A0A088CBK9	Shigella_phage	3.7e-17	38.1
WP_000687975.1\|1980108_1980381_+	hypothetical protein	NA	NA	NA	NA
WP_001597144.1\|1980584_1980740_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.2e-14	84.3
WP_023201656.1\|1981303_1981903_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.0e-95	82.9
WP_023201657.1\|1981899_1982127_+	gifsy-1 prophage NinG	A0A0M4RU10	Salmonella_phage	3.8e-14	84.0
WP_023201658.1\|1982256_1982952_+\|tail	phage tail tape measure protein	A5LH38	Enterobacteria_phage	6.5e-49	51.9
1982199:1982213	attR	NA	NA	NA	NA
WP_000978295.1\|1982948_1983281_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.6e-35	61.5
WP_000725267.1\|1983379_1983877_+	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000877926.1\|1983993_1984527_-	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_001152416.1\|1984616_1985312_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.0e-89	66.7
WP_000606354.1\|1985321_1986059_+\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	6.1e-114	75.6
WP_001576012.1\|1985956_1986661_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
WP_023201659.1\|1986732_1990071_+	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.0
WP_000178849.1\|1990109_1990352_+	hypothetical protein	NA	NA	NA	NA
WP_023201660.1\|1990405_1993096_+\|tail	side tail fiber protein	A0A1B0VFW4	Salmonella_phage	1.6e-151	65.5
WP_000421115.1\|1993110_1993629_+\|tail	tail fiber assembly protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
WP_053299959.1\|1994264_1994597_-	hypothetical protein	A0A1B0VCD0	Salmonella_phage	1.7e-18	66.2
WP_053299960.1\|1994742_1996749_+	E3 ubiquitin--protein ligase	Q9MBL9	Phage_Gifsy-2	1.5e-61	79.6
WP_000334550.1\|1997059_1997731_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.8e-80	61.3
WP_024792631.1\|1997984_1998197_+	hypothetical protein	Q77Z09	Phage_21	1.5e-20	92.6

DBSCAN-SWA_4

2776721 : 2840975

Brevibacillus_phage(25.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053299969.1\|2776721_2777021_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_106096963.1\|2777214_2777778_-	sel1 repeat family protein	NA	NA	NA	NA
WP_106096964.1\|2777755_2778181_-	sel1 repeat family protein	NA	NA	NA	NA
WP_072141715.1\|2778248_2778761_-	hypothetical protein	NA	NA	NA	NA
WP_023201813.1\|2778869_2779340_-	hypothetical protein	NA	NA	NA	NA
WP_024146117.1\|2779339_2779750_-	hypothetical protein	NA	NA	NA	NA
WP_023202261.1\|2779919_2780093_-	hypothetical protein	NA	NA	NA	NA
WP_023202259.1\|2780642_2781677_-	site-specific tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	1.2e-17	26.1
WP_023202258.1\|2781879_2784852_-	toprim domain-containing protein	A0A1S5RG58	Helicobacter_phage	3.6e-19	23.6
WP_023202257.1\|2784949_2785348_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_023202256.1\|2785422_2785734_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_023202255.1\|2785857_2786178_-	hypothetical protein	NA	NA	NA	NA
WP_139775878.1\|2791103_2791478_-	hypothetical protein	NA	NA	NA	NA
WP_023201516.1\|2791671_2792148_-	Rhs core protein	NA	NA	NA	NA
WP_023201517.1\|2792294_2792726_-	hypothetical protein	NA	NA	NA	NA
WP_000821332.1\|2792930_2793239_-	hypothetical protein	NA	NA	NA	NA
WP_023202261.1\|2793852_2794026_-	hypothetical protein	NA	NA	NA	NA
WP_023202259.1\|2794575_2795610_-	site-specific tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	1.2e-17	26.1
WP_023202258.1\|2795812_2798785_-	toprim domain-containing protein	A0A1S5RG58	Helicobacter_phage	3.6e-19	23.6
WP_023202257.1\|2798882_2799281_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162489947.1\|2800176_2800446_-	hypothetical protein	NA	NA	NA	NA
WP_139775878.1\|2805029_2805404_-	hypothetical protein	NA	NA	NA	NA
WP_023201516.1\|2805597_2806074_-	Rhs core protein	NA	NA	NA	NA
WP_023201517.1\|2806220_2806652_-	hypothetical protein	NA	NA	NA	NA
WP_000821332.1\|2806856_2807165_-	hypothetical protein	NA	NA	NA	NA
WP_023201837.1\|2807869_2808268_-	hypothetical protein	NA	NA	NA	NA
WP_144417221.1\|2808332_2809658_-	hypothetical protein	A0A2H4JFP5	uncultured_Caudovirales_phage	4.9e-21	40.5
WP_023202334.1\|2812792_2814934_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.6e-24	26.2
WP_001142966.1\|2815156_2815675_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000031252.1\|2816302_2816806_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_023202333.1\|2816835_2817048_+	hypothetical protein	NA	NA	NA	NA
WP_023202332.1\|2817096_2818569_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000611699.1\|2818565_2818982_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_023202331.1\|2818986_2820840_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000509050.1\|2820803_2821892_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_000796942.1\|2821916_2823203_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_124084121.1\|2823229_2823733_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000246455.1\|2823735_2825067_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_000343978.1\|2825071_2825830_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_023202330.1\|2825842_2828578_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.1e-83	31.4
WP_000089146.1\|2828574_2829312_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_023202329.1\|2829313_2830726_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_031607870.1\|2830744_2834266_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_053299970.1\|2834276_2835668_+	hypothetical protein	NA	NA	NA	NA
WP_001284962.1\|2835655_2836135_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_001022121.1\|2837059_2837500_+	hypothetical protein	NA	NA	NA	NA
WP_001244612.1\|2837508_2837880_+	hypothetical protein	NA	NA	NA	NA
WP_000623374.1\|2838003_2838462_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_086016038.1\|2839720_2840975_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	4.8e-18	34.5

DBSCAN-SWA_5

2994003 : 3003200

Enterobacteria_phage(16.67%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086016038.1\|2994003_2995258_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	4.8e-18	34.5
WP_001117984.1\|2996426_2996624_+	hypothetical protein	NA	NA	NA	NA
WP_000934064.1\|2996836_2999113_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|2999143_2999464_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|2999787_3000009_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_053299973.1\|3000138_3002085_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.2e-39	42.3
WP_023202044.1\|3002081_3003200_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_6

3625643 : 3693851

Enterobacteria_phage(20.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023201340.1\|3625643_3625943_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_001658790.1\|3626803_3627079_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	5.4e-23	62.8
WP_023202202.1\|3627433_3628684_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.8e-98	48.2
WP_001285275.1\|3628695_3629799_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_001043673.1\|3630081_3631134_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.4e-113	58.5
WP_000174693.1\|3631184_3631586_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000189585.1\|3631643_3632888_-	esterase FrsA	NA	NA	NA	NA
WP_001292018.1\|3632976_3633435_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_001292977.1\|3633683_3635141_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_023202203.1\|3635296_3635896_-	peptide chain release factor H	NA	NA	NA	NA
WP_000528901.1\|3635892_3637032_-	RNA ligase RtcB family protein	A0A222ZM82	Mycobacterium_phage	7.7e-31	30.8
WP_001226205.1\|3637250_3638306_-	DNA polymerase IV	NA	NA	NA	NA
WP_001225658.1\|3638555_3639296_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000333387.1\|3639266_3640034_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284051.1\|3640197_3640776_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.3e-13	30.8
WP_000973041.1\|3641015_3643460_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000015789.1\|3643568_3644336_+	amidohydrolase	NA	NA	NA	NA
WP_000788200.1\|3644645_3645053_+	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_000787602.1\|3645392_3646112_+	adhesin/invasin protein PagN	NA	NA	NA	NA
WP_001532956.1\|3646115_3646331_-	hypothetical protein	NA	NA	NA	NA
WP_000970302.1\|3646450_3647398_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023202204.1\|3648214_3649036_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_000266937.1\|3649443_3649914_-	pilin structural protein SafD	NA	NA	NA	NA
WP_023202205.1\|3649935_3652446_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_000691916.1\|3652469_3653210_-	pili assembly chaperone PapD	NA	NA	NA	NA
WP_053299982.1\|3653284_3653782_-	Saf-pilin pilus formation protein SafA	NA	NA	NA	NA
WP_023202207.1\|3653914_3654409_-	Saf-pilin pilus formation protein SafA	NA	NA	NA	NA
WP_086011251.1\|3655241_3656403_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.2e-52	41.9
WP_023165496.1\|3657182_3657431_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_077944729.1\|3657562_3657841_-	hypothetical protein	NA	NA	NA	NA
WP_000828178.1\|3658158_3658626_-	sugar tyrosine-protein kinase	NA	NA	NA	NA
WP_124084119.1\|3659498_3659732_-	hypothetical protein	NA	NA	NA	NA
WP_023202535.1\|3660065_3660341_+	type I addiction module toxin, SymE family	NA	NA	NA	NA
WP_024135628.1\|3660388_3660622_-	hypothetical protein	NA	NA	NA	NA
WP_024146194.1\|3660821_3663629_-	RHS repeat protein	A0A2H4JFP5	uncultured_Caudovirales_phage	2.2e-31	40.0
WP_077944713.1\|3663667_3663934_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_023202538.1\|3664051_3664390_-	hypothetical protein	NA	NA	NA	NA
WP_023202539.1\|3664411_3668542_-	putative RHS-like protein	A0A2H4JHK7	uncultured_Caudovirales_phage	4.2e-26	50.0
WP_000375832.1\|3668560_3669007_-	DcrB-related protein	NA	NA	NA	NA
WP_023181843.1\|3669030_3671220_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_077944714.1\|3671616_3672138_-	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_000759645.1\|3672161_3672578_-	DUF2195 family protein	NA	NA	NA	NA
WP_023202541.1\|3672574_3673363_-	DUF2094 domain-containing protein	NA	NA	NA	NA
WP_023202542.1\|3673362_3677232_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_077943634.1\|3677265_3677697_-	Shiga toxin A subunit	NA	NA	NA	NA
WP_023202544.1\|3677898_3678672_-	hypothetical protein	NA	NA	NA	NA
WP_000132483.1\|3678676_3679981_-	type VI secretion system protein TssL	NA	NA	NA	NA
WP_000118732.1\|3679977_3681321_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_023202545.1\|3681324_3681861_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000312793.1\|3681927_3682413_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_077917331.1\|3682664_3682997_-	hypothetical protein	NA	NA	NA	NA
WP_023202546.1\|3683123_3683510_-	BPSL0067 family protein	NA	NA	NA	NA
WP_000013884.1\|3683574_3685083_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000996818.1\|3685106_3685649_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_023202547.1\|3685748_3688388_-	type VI secretion system ATPase TssH	A0A2I7SAX5	Vibrio_phage	6.7e-78	34.7
WP_000806671.1\|3688755_3689658_+	type VI secretion system-associated protein TagK	NA	NA	NA	NA
WP_001647896.1\|3689644_3690469_+	protein of avirulence locus ImpE	NA	NA	NA	NA
WP_000108007.1\|3690465_3690960_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000371487.1\|3690975_3692859_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_023202548.1\|3692855_3693851_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_7

4406393 : 4447596

Burkholderia_phage(44.44%)

plate,tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023201668.1\|4406393_4407392_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_023201669.1\|4407479_4408790_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416271.1\|4409036_4409552_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4409650_4409860_-	CsbD family protein	NA	NA	NA	NA
WP_001575282.1\|4409881_4409995_-	hypothetical protein	NA	NA	NA	NA
WP_001128112.1\|4409991_4411317_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4411495_4412104_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002900.1\|4412212_4412581_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4412751_4415172_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455246.1\|4415270_4416143_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4416156_4416654_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4416835_4417753_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973642.1\|4417916_4419275_-	maltoporin	NA	NA	NA	NA
WP_023201670.1\|4419363_4420473_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	8.1e-17	47.2
WP_000695415.1\|4420834_4422025_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382570.1\|4422156_4423701_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4423715_4424606_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982752.1\|4424771_4425182_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750805.1\|4425324_4427421_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_023201671.1\|4427420_4428158_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_022742863.1\|4428154_4428823_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4428856_4429099_-	outer membrane protein	NA	NA	NA	NA
WP_023201672.1\|4429542_4431192_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136394.1\|4431579_4432929_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4433059_4433407_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226439.1\|4433983_4434271_+	membrane protein	Q6QIC8	Burkholderia_phage	3.0e-16	48.1
WP_023201674.1\|4434273_4434879_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.7e-59	58.8
WP_000777269.1\|4434891_4435206_+	hypothetical protein	Q6QIC4	Burkholderia_phage	4.9e-20	49.1
WP_023201675.1\|4435364_4435820_+	hypothetical protein	NA	NA	NA	NA
WP_023201676.1\|4435816_4436014_+	hypothetical protein	Q6QIB1	Burkholderia_phage	1.3e-07	54.9
WP_023201677.1\|4436003_4437431_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	6.2e-195	71.6
WP_000907494.1\|4437430_4437955_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_023201678.1\|4438006_4438324_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4438283_4438412_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_023201679.1\|4438505_4440872_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	8.7e-69	31.7
WP_023201680.1\|4440871_4441825_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_023201681.1\|4441824_4442034_+	phage Tail protein X	A4JWL2	Burkholderia_virus	7.5e-17	63.2
WP_023201682.1\|4442021_4443065_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.6e-75	45.3
WP_023201683.1\|4443074_4443797_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_001093501.1\|4443895_4444255_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_023138096.1\|4444245_4445361_+\|plate	phage baseplate protein	Q6QI99	Burkholderia_phage	5.3e-101	52.0
WP_023201684.1\|4445353_4445986_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_053299988.1\|4445988_4447596_+\|tail	phage tail protein	A0A0M3ULF6	Salmonella_phage	7.7e-53	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP012349

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection