CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_020209	Pseudomonas poae RE*1-1-14, complete sequence	3 crisprs	DEDDh,DinG,csa3,cas3,WYL	3	0	6	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_020209_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020209_1

1583254-1583326

Orphan

Consensus_repeat	Method
CCCTGTGGCGAGCGGGCTTGTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020209_1

>merge|NC_020209|1|1583254-1583326|CRISPRCasFinder
CCCTGTGGCGAGCGGGCTTGTCCTAATGCCGTTCAGTTAAGTGCAGATTCCCTGTGGCGAGCAGGCTTGTCCT

>NC_020209|1|1|1583254-1583326|CRISPRCasFinder
CCCTGTGGCGAGCGGGCTTGTCCT	AATGCCGTTCAGTTAAGTGCAGATT
CCCTGTGGCGAGCAGGCTTGTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NC_020209.1\|WP_015371884.1\|1595599_1596949_-\|glucarate-dehydratase	unknown	unknown	gnl\|CDD\|211799
NC_020209.1\|WP_015371876.1\|1582350_1583232_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NC_020209.1\|WP_003235605.1\|1576170_1576443_-\|hypothetical-protein	unknown	unknown	unknown
NC_020209.1\|WP_015371880.1\|1591691_1592561_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NC_020209.1\|WP_015371877.1\|1584369_1585599_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|235710
NC_020209.1\|WP_015371879.1\|1586703_1591413_-\|RHS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225750
NC_020209.1\|WP_015371881.1\|1592866_1594312_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NC_020209.1\|WP_032870962.1\|1577877_1578828_-\|nucleoside-specific-channel-forming-protein-Tsx	unknown	unknown	gnl\|CDD\|237911
NC_020209.1\|WP_015371872.1\|1575339_1575792_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|377396
NC_020209.1\|WP_003235603.1\|1575881_1576052_+\|putative-metallothionein	unknown	unknown	gnl\|CDD\|366903
NC_020209.1\|WP_081602879.1\|1586302_1586707_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379735
NC_020209.1\|WP_015371883.1\|1595152_1595581_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NC_020209.1\|WP_015371874.1\|1579753_1581592_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
NC_020209.1\|WP_015371882.1\|1594349_1595048_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181335
NC_020209.1\|WP_015371878.1\|1585687_1586044_-\|hypothetical-protein	unknown	unknown	unknown
NC_020209.1\|WP_041931456.1\|1574846_1575335_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|377396
NC_020209.1\|WP_003235607.1\|1576834_1577863_-\|purine-nucleoside-permease	unknown	unknown	gnl\|CDD\|377669
NC_020209.1\|WP_015371875.1\|1581612_1582230_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NC_020209.1\|WP_041931605.1\|1596962_1598312_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NC_020209.1\|WP_015371873.1\|1579166_1579757_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225765

Protein	Function_ID	Function_description	E-value
NC_020209.1\|WP_041931605.1\|1596962_1598312_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.27909e-96
NC_020209.1\|WP_015371876.1\|1582350_1583232_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.27434e-87
NC_020209.1\|WP_015371880.1\|1591691_1592561_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.57328e-91
NC_020209.1\|WP_081602879.1\|1586302_1586707_-\|hypothetical-protein	gnl\|CDD\|379735	pfam15594, Imm50, Immunity protein 50. A predicted immunity protein with an all-beta fold. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, usually containing a domain of the Tox-HHH or Ntox24 families.	2.84948e-12
NC_020209.1\|WP_015371879.1\|1586703_1591413_-\|RHS-domain-containing-protein	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	2.65811e-42
NC_020209.1\|WP_015371884.1\|1595599_1596949_-\|glucarate-dehydratase	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
NC_020209.1\|WP_032870962.1\|1577877_1578828_-\|nucleoside-specific-channel-forming-protein-Tsx	gnl\|CDD\|237911	PRK15106, PRK15106, nucleoside-specific channel-forming protein Tsx; Provisional.	1.26491e-166
NC_020209.1\|WP_015371872.1\|1575339_1575792_+\|DMT-family-transporter	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	1.04008e-24
NC_020209.1\|WP_003235603.1\|1575881_1576052_+\|putative-metallothionein	gnl\|CDD\|366903	pfam02069, Metallothio_Pro, Prokaryotic metallothionein.	0.000309393
NC_020209.1\|WP_015371877.1\|1584369_1585599_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|235710	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed.	0
NC_020209.1\|WP_015371883.1\|1595152_1595581_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.06621e-30
NC_020209.1\|WP_015371874.1\|1579753_1581592_+\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	0
NC_020209.1\|WP_015371882.1\|1594349_1595048_-\|SDR-family-oxidoreductase	gnl\|CDD\|181335	PRK08264, PRK08264, SDR family oxidoreductase.	1.19011e-106
NC_020209.1\|WP_015371881.1\|1592866_1594312_+\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	6.5923e-31
NC_020209.1\|WP_041931456.1\|1574846_1575335_+\|DMT-family-transporter	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.29384e-27
NC_020209.1\|WP_003235607.1\|1576834_1577863_-\|purine-nucleoside-permease	gnl\|CDD\|377669	pfam06516, NUP, Purine nucleoside permease (NUP). This family consists of several purine nucleoside permease from both bacteria and fungi.	1.19957e-172
NC_020209.1\|WP_015371875.1\|1581612_1582230_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	2.74584e-66
NC_020209.1\|WP_015371873.1\|1579166_1579757_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225765	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown].	1.09732e-30

>NC_020209.1|WP_015371876.1|1582350_1583232_+|LysR-family-transcriptional-regulator
MNPFEDMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQSYYESALRLLSDVEQVEQGIAGQNSEPRGTLRLSAPLSFAMAHLGCLLPLFLQRCPHVAVEVDLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIASIPRVYCASPDYLALRGTPQKPDDLAEHDCLPYGHGRQVQWRFKGKVQALNVSGRMRVNNGDLLRDAAIAGLGVTYLPTFIVGEALRDGRLVTVLDDFAPEALTLSAVYPQHRQSSRPVQALVEFLRERLAGGC
>NC_020209.1|WP_015371875.1|1581612_1582230_+|hydrolase
MTYKRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADVAKFFNLPTILTTSFEAGPNGPLVPELKALFPDAPYIARPGQINAWNNEDFVNAVKATGRKQIIIAGVVTDVCVAFPTLCALAEGFDVFVVTDASGTFNETVQQAAWARMSAAGAQLVNWFCVACELQVDWRNDMEGLANLLSPRIPNYRNLMNSYSAFTAK
>NC_020209.1|WP_015371874.1|1579753_1581592_+|amidohydrolase
MNADLILFNGQFHTVDRENPRATAVAIHEGRFVAVGTDGEAMALRGSGTQVIDLKGRTVIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKDQADRTPTPQWVRVVGGWNEFQFAEKRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRVAGYTKDTPNPPGGEIVRDSHGNPTGMLVARPNAMILYATLAKGPKLPLEYQVNSTRQFMRELNRLGLTSAIDAGGGFQNYPDDYAVIEQLARDEQLTVRIAYNLFTQKPKEELSDFKHWTGSVTLHQGDDYLRHNGAGEMLVFSAADFEDFLEPRPDLPLTMEQELEPVVRHLVEQRWPFRLHATYDESISRMLDVFEKVNRDIPFNGLPWFFDHAETITPQNIERVRALGGGIAIQDRMAFQGEYFVERYGAKAAEATPPIQRMLAEGVPVGAGTDATRVSSYNPWTSLYWMVSGRTVGGLALHAEGLPRLTALELFTHGSAWFSSEQGKKGQIKVGQLADVAALSADFFSVDEEAIKWIESVLTVVGGKVVYGAGDFEDFAPPRVPVLPDWSPVVKVPGHWRPGAPMQAQVHQCSGPCGVHAHRHETARLSSVPVSDFQGFWGAFGCSCFAF
>NC_020209.1|WP_015371873.1|1579166_1579757_+|antibiotic-biosynthesis-monooxygenase
MDATSGTGPDEVVTLVVKHLIKRGREADYEAWLRRIVRIAGERPGHLGVDVVRGTQNGQALFTCVLRYRSTHDLEVWLDSAQRKLLIDEAAPMLADGDNTEVGGANEFWFTPLADSAAKPPRWKQAVVSLCVILPQTLILPFIWGPILRLHPFLSNYVVSTFLVTLTIVLLVVYLLMPAATRMFAPWLEASVKETL
>NC_020209.1|WP_032870962.1|1577877_1578828_-|nucleoside-specific-channel-forming-protein-Tsx
MHLNTRPRACFGVSMLLAAVTGVLSAPSLAQEKPTDDSAQGETLSPEASPATKKGVYLSQWFNQDLTLIGSKDISFGPRPQDDVYLEYEYFGRKGPFELYGYVDVPKILTIGNSNDKGVWDHGSPVFMEHEPRISIDYLAGRSLAVGPFKEWYVAFDWIYDHGSNKENRANTLYSGLGTDIDTHSRVNLSANFYGRYQWENYGASNEYSWDGYRAQMKYIVPIGTFDNGASLTYIGFTNYDFGSDLHKDNPARTANSLVATNVLLYSFTHLRFTLVGRYFHNGGNWEDGSELNFGEGNFRARSDGWGYYAGVGYQF
>NC_020209.1|WP_003235607.1|1576834_1577863_-|purine-nucleoside-permease
MKAFTRVSIAMSLALLPSVVLAQTAPIKPKVMLITMFAPEAQTWIDRLALKQEVRVPGLSAEYPVIRCNTQDVCLLVTGMGQTNAAASTLALALSPKFDLRQSYFLIAGIAGISPKHGTLGTAAWAHYLVEFGTQWELDSRDVPKDWPTGYIGINTKGPNEKPPLDYKTEVFELNPKLQAKAFALSHKVTLSESKESAAWRQHYPAAPANQPPQVTRCDTLAGNTWFSGTRLSERAEVWTKLLTDNKGEYCTTQQEDNSTYEALLRASREGLVDIQRLAVVRAGSDFDRPYPGYSEVDNLLKYADQGGFVPALENLYRTGNPLVQAILNNWSAWEKGVPEAE
>NC_020209.1|WP_003235605.1|1576170_1576443_-|hypothetical-protein
MDLSAQVNGKAQIDYTQDTLFGPLAKHAECQVSVQQESDCLILKVLQPLPDDLHHAQTVVFALEGKRTSAVVKHRKRLSDHSLRLELETQ
>NC_020209.1|WP_003235603.1|1575881_1576052_+|putative-metallothionein
MPDQTCACPHCKCVLGVDAVMKDGKGYCCEGCAQHHAHGEPCAASANCECAKSAHG
>NC_020209.1|WP_015371872.1|1575339_1575792_+|DMT-family-transporter
MNLILLLVVVVAAGAVLSVQAAINGRLGQTVGVLRSSLVTFGIGALVTALLIFFFEPAHAVSLLDVPKWQLTGALFGVVYMIVMVGAVPVVGTAVATVAVITGQLAMGMLIDNFGWLGNPAIELSGSRIVAMVCLALALVFMYRSNARSE
>NC_020209.1|WP_041931456.1|1574846_1575335_+|DMT-family-transporter
MQASSVEGVAQVKPKRNILKLLLLPLVILAGMGLSMEAGLLGPLGEQVGHLWATLSIFGVGSALLFLLLFFSGARKGPALSELPRWQLIGGFLGPIYVVVLTLATPHIGIAMTMIAILSGQVGKSVLIDHFGWFGTARKRVNGERWIALALIVVALVLIARG
>NC_020209.1|WP_015371877.1|1584369_1585599_+|M20/M25/M40-family-metallo-hydrolase
MLFTFPRTLLAATLALSFSLPAYSAEPHKQIQADAEQYKGPALKLLERLVNIDSGSGYGPGLTQVSDIAVDELKQLGFSIERVPDAAANSSHVIATLKGSGKANILLMAHMDTVFKEGSAAERPFHIKDGRAYGPGVMDDKGGIVAGIYALKVLKNQGFKDYATITFLLDASEETGSDIASDLIRKTAKGHDVTLNLEPGRPADGLVVWRKGSATAVVDVKGKAAHAGVAPELGRNAAMEAAHQILQLGKLGDEDKKTTINFTVINAGDRTNVIPDHATAKADVRAALPEEFDRIEKDLVRVSANKLIPDTEVTTRLKRGLPPMPQTAESDKLVAIAQGIYGELGKQLTIEGSGGAADASLSAGVGTPTLDGFGIVGGNIHTPEEYAEVESVVPRVYLLSRMIMELSKR
>NC_020209.1|WP_015371878.1|1585687_1586044_-|hypothetical-protein
MNKKPSISIIRGLLFTYDIENTDDLEREEFISSKDINNEQELIALFEKLTKPEFLDYTKPEQEWFVSSIEHYLSTNDNFDAVFKNMATHFSEPVADQRKFMQILVNCLKQYTSLQRSK
>NC_020209.1|WP_081602879.1|1586302_1586707_-|hypothetical-protein
MKFWNDFERSIFFNHVFTTPILIGKITLFSFNIDNNRSHINMEFDIPEIPDRPPEKWIAEGFNTCRIGLSCGGITDLIIKNLPTLDTFNMSVHKHENFFSVRAESAGSLIEFRTKYPSLSGPSVYMNDPDSACY
>NC_020209.1|WP_015371879.1|1586703_1591413_-|RHS-domain-containing-protein
MIPVIAKLVLTPMDATAPDVESVFRDFRDCLNTFDTWAERFWSGSALELEQVFNVGEDVTLSAPVSSRTPSAVVATCPAQGSLTLLHLFESTRLVPIGNTPVRVQAIATDGSALGAPLHRTIDASGRLEIPECTRSQPYHITFYPNVSKDHVKALYASYQSLIAGLETRLREEWKDTFQAQWTEFAKAPPLKRSALQGAAFAGGLAKALYNLWDNITQLYDLIANLKANSEQWLRYVSQRELDELLKLGKDAIAHGLLVLSDEPLLFIYLSAMIGWIRLLPPPQMVELVGEITGEVLINLLLIWATRGMGVKIRLGVQVVGHIKSGQVRRWLEMLAEQLAQPGLAQHVETARPLLLWSAATPIKAVAPLKVGEALVPNAVPAVRKKTQRTALVHESPVDDVPVSAKNPAGDAAASSDKTVTHGCPVSMVTGEELLTLTDGILDGILPFEWTRVYRTSAVEIDVGLGFGWSHALAQRLVVSGDSVVWTDHENRSTALPLPTIARPAITNSLAEAAIFLGDLPDELVLAQASRFYHFRDGVLVAISDAYDNRLRISRDVLGRIERLDNGAGRSLWLRYAQGRIAAVDYQVHRAKGREPYEWVTEQTVVSYAYDDAGQLVSATNAVGECEIYRYDEQHVILERGLAGGASFFWAWERSGKAARCVRHWASFAQMDTRYVWGDDGRVTVHNADGSQEVYVHDQRARLVQRVDPDGAQHFKSYDAKGRLTVEQDPLGAVTAYQYDDAGRLVALFPGDDEPTSYEHDNGFVRVVRRGEAVWKYERNEQGDVTRKTDPDGHVTDYSYNKQGQLIGVWYPDHNCQRLVWNERGQRVEEQLPNGGIRRYRYDDLGRQIALEDEHGALTQYQWDSVGRLTRLILPGGACREYSYNAYGKITAERDELGHVTRYEYADGLHLISRRLNADGTQVQYRYDNARLLLTEIENEVGETYRLAYHPNGLIQQEIGFDGQRTAYVYDLNGHLQEKTEHGDDGSQLITRYERDAAGRLVRKTLPDGNKVDYAYDRQGNLLSVEDGHWALAYEYDRQNRLTAEHQGWGTLRYGYDACGQLQHLRLPDNNRVTFNHDKGGHLATVQLNGEVLTSHLFKAGKEHQRQQGDLLSHYHYDDQHRLHAHAITQQENRHYRRQYDYDKSGNLARILDTRKGEHHYAYDPLHRLTRADHSQDLQERFGHNPAGNLLMHDRPGPDIVAGNRLMIQGDRHYDHDAFGNLIRERRGKGQALVSEYRYDCQHRLIAVKKPNGQTAHYRYDPFGRRISKIVDDKTTEFFWQGDKLIAEHHADRHRSYLYEPDSFRPLALLDGFGPDATKPYHYQLDHLGTPQELTAADGEIVWSAHYRAYGHISRLDVGKIDNPLRFQGQYFDPESGLHYNRHRYYNPDVGRYLTPDPVKLAGGINAYQYVPNPTGWVDPRGLSAECPGNKKSKKSCNNSPEPEDPIHSRTGAFRQAKSDAKVPMSQHPNTVFNAEIGAYGQFRYIRMKDKQGQEIRKIDGKPIITREYEFTRENGSTVVIQEHSAGHKFGAPGGVGDQGAHFNLRPVGNTRTGNVAGAKDHYYFEVKK
>NC_020209.1|WP_015371880.1|1591691_1592561_+|pirin-family-protein
MKKLIGLYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPADFTPTDQRRGVGQHPHRGFETVTIVYDGEVEHRDSTGAGGKIGPGDVQWMTAARGILHEEFHSDAFARSGGALEMVQLWVNLPARDKMADAGYQTIVDGDIPVLPLANDAGKLRLIAGEFAGTQGPARTFTPIDVWDLRLNAGKAVTLDLHAGRNTALVILRGTVRINGEEVARQGQLALFERDGQQLSLASDDDAMVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQAGKFGQMHGR
>NC_020209.1|WP_015371881.1|1592866_1594312_+|mechanosensitive-ion-channel
MPSFIADHPMLCALVLILIDIAVWRLISADLANWKLAARVVIFAVFSAVLFNDGMNPMLVAPYADDTALHMAATALQIGWWLFAARTLTVLLGALMMQRVGHTGRLLQDLMGAVIFLIAIIAAMAYVLDLPVKGVLATSGAVAIIVGLALQSTLSDVFSGIVLNTTKPYQLDDWISIDGTEGRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKIINFSRPADMFGLTVSLQVSPHARPQTVIDALERAMQGCRPLLARPAPSVAFKASASGGVEYEISGFVPAMTLKREVRNQLYDLAFRHLQAAGVGLLSSTESSAPAEMSGARALLERSSIFSTLRQEEKETFSQNMTLHTYRAGEMILPAGEVSDHLFIVESGVVSVMLTKAGHTFEAGRMGPGEVIGEAGILSDQAALADFTAKTFCTLYRIENEYLKPCLDARHDIGEAMKALLDFRLHAAQVLTEDAPVVPVKKGFLQWLRKRGL
>NC_020209.1|WP_015371882.1|1594349_1595048_-|SDR-family-oxidoreductase
MDIRGKVVLVTGANRGLGKAFVSALLAAGAAKVYAGARDAGSVDIPGSTPIALDITDPASVQRAAEQCGDVSVLINNAGLLKYGSLLAEDSVDNLQQHFEVNTLGTLRMSRAFAPILARQGGGALINILSVLSWLSPPGSGGYSSSKSAQWGLTNGLRGELRGQNTLVIGVHPAYIDTDMVADVQAPKSTPAEVVAVTLQALSEDRQEALVSDTAHGVKASLSTASPVYLTL
>NC_020209.1|WP_015371883.1|1595152_1595581_+|helix-turn-helix-transcriptional-regulator
MKRKCLEGNGCPVARALDVVGDWWTLLIIRDAFAGVTRFGDFQKHLGVAKNILATRLKDMVEQGLLETRDVGARSDYQLTDKGRALMPVLVTLAQWGEAHTEPADVGTQLLDARLLKPLRKVEIVSEDGRVMGLGDIVTQAP
>NC_020209.1|WP_015371884.1|1595599_1596949_-|glucarate-dehydratase
MNTEHQHHASNAPVVTSLQVIPVAGHDSMLLNLSGAHGPFFTRNIVILQDSAGHIGVGEVPGGERIRETLEEARSLVIGKPIGQYQSILNAMRRTFAARDSGGRGLQTFDLRITIHAVTAMEAALLDLLGQFLDVPVAALLGEGQQRDAVKMLGYLFYIGDRNRTDLAYRSEADADDWFRLRHEQAMTPDAIVRLAEAAKAKYGFNDFKLKGGVLRGAEEIDAVTALAERFPDARITLDPNGAWSLKEAIALCRDQHHVLAYAEDPCGAENGYSGREVMAEFRRATGLPTATNMIATDWREMGHAIQLQSVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTQVAAAAPGDITAIDTHWIWQDGQRLTKAPLQIVDGHIKVPTKPGLGVEIDMDAVAQAHELYQGMGLGARNDSVAMQFLIPGWSFDNKRPCLVR
>NC_020209.1|WP_041931605.1|1596962_1598312_-|MFS-transporter
MTPSSPATAAPAHDPVLARAIRKVKSHVLPLFVIMFIVNYIDRVNIGFVRTHMEHDLGIGAAAYGLGAGLFFIGYALFEVPSNLLLQKVGARIWLTRIMFTWGITATLMAFIQNETHFYILRFLLGVAEAGFFPGVIYYFTRWLPGVERGKAIAIFLSGSALASLISGPLSGVLLQITGMGLHGWQWMYIIEGMASVLLCFFVWFWLDSKPHDAKWLSREEQDALVGEIDREQRERDAVNTVKPSLGTLLKDRQIMLFCALYFCIQLTIYAATFWLPSIIKKMGDLSDIQVGFYNSIPWLISIIAMYSFAALAGKYKHQQAWVATALLIAAAGMFCSTTGGPVFAFIAICFAAIGFKSASSLFWPIPQGYLDARIAAAVIALINSIGNLGGFVAPTTFGFLEQTTGSIQGGLYGLAGTSILAAILVFFAKTRPGAHTASVLHPAPALSK

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Crispr_ID: NC_020209_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020209_2

2086225-2086303

Orphan

Consensus_repeat	Method
GGGGCAAGCCCGCTCGCCACAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020209_2

>merge|NC_020209|2|2086225-2086303|CRISPRCasFinder
GGGGCAAGCCCGCTCGCCACAATAAGCCCACACATTCTCCTTAACTGAACGGCATTGGGGCAAGCCCGCTCGCCACAGA

>NC_020209|2|2|2086225-2086303|CRISPRCasFinder
GGGGCAAGCCCGCTCGCCACAAT	AAGCCCACACATTCTCCTTAACTGAACGGCATT
GGGGCAAGCCCGCTCGCCACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_020209.1\|WP_015372165.1\|2083256_2085236_+\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NC_020209.1\|WP_015372159.1\|2063245_2073286_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237054
NC_020209.1\|WP_003230590.1\|2089746_2090727_-\|sugar-ABC-transporter-membrane-protein	unknown	unknown	gnl\|CDD\|226633
NC_020209.1\|WP_015372160.1\|2073282_2077008_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341253
NC_020209.1\|WP_003230593.1\|2088779_2089712_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380544
NC_020209.1\|WP_041931482.1\|2096436_2098716_-\|acylase	unknown	unknown	gnl\|CDD\|376618
NC_020209.1\|WP_015372162.1\|2078639_2079296_-\|siderophore-iron-reductase-FhuF	unknown	unknown	gnl\|CDD\|274875
NC_020209.1\|WP_015372163.1\|2079522_2081226_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|226646
NC_020209.1\|WP_003230606.1\|2081248_2082604_-\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NC_020209.1\|WP_015372173.1\|2099768_2101763_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NC_020209.1\|WP_003230581.1\|2099340_2099535_-\|hypothetical-protein	unknown	unknown	unknown
NC_020209.1\|WP_041931481.1\|2092448_2093843_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NC_020209.1\|WP_015372158.1\|2049308_2063198_+\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NC_020209.1\|WP_015372164.1\|2082795_2083176_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NC_020209.1\|WP_015372166.1\|2085586_2086045_+\|transposase	unknown	unknown	gnl\|CDD\|376616
NC_020209.1\|WP_015372161.1\|2077008_2078649_+\|cyclic-peptide-export-ABC-transporter	unknown	unknown	gnl\|CDD\|226968
NC_020209.1\|WP_003230587.1\|2094359_2095979_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NC_020209.1\|WP_015372168.1\|2087765_2088758_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NC_020209.1\|WP_015372169.1\|2090719_2092252_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NC_020209.1\|WP_003230583.1\|2098953_2099334_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_020209.1\|WP_015372165.1\|2083256_2085236_+\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	9.2351e-95
NC_020209.1\|WP_015372159.1\|2063245_2073286_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237054	PRK12316, PRK12316, peptide synthase; Provisional.	0
NC_020209.1\|WP_003230590.1\|2089746_2090727_-\|sugar-ABC-transporter-membrane-protein	gnl\|CDD\|226633	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only].	7.25013e-121
NC_020209.1\|WP_015372160.1\|2073282_2077008_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|341253	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as an (amino) acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms a thioester bond to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. NRPSs are large multifunctional enzymes which synthesize many therapeutically useful peptides in bacteria and fungi via a template-directed, nucleic acid independent nonribosomal mechanism. These natural products include antibiotics, immunosuppressants, plant and animal toxins, and enzyme inhibitors. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	2.12421e-159
NC_020209.1\|WP_003230593.1\|2088779_2089712_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380544	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	2.26381e-119
NC_020209.1\|WP_041931482.1\|2096436_2098716_-\|acylase	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	1.63276e-143
NC_020209.1\|WP_015372162.1\|2078639_2079296_-\|siderophore-iron-reductase-FhuF	gnl\|CDD\|274875	TIGR03951, Fe_III_red_FhuF, siderophore-iron reductase FhuF. Members of this protein family, including FhuF of E. coli, are siderophore ferric iron reductases that appear to play a role in iron removal from certain hydroxamate-type siderophores, including coprogen, ferrichrome, ferrioxamine B, and aerobactin. Genes occur in regularly in siderophore transport and/or biosynthesis clusters. The C-terminus includes four Cys residues in a C-C-10(X)-C-X-X-C motif that binds a 2Fe-2S cluster. Family TIGR03950 is similar, but especially in the C-terminal region, but likely acts on a different panel of siderophores. [Energy metabolism, Electron transport, Transport and binding proteins, Cations and iron carrying compounds].	1.03577e-13
NC_020209.1\|WP_015372163.1\|2079522_2081226_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|226646	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].	1.98448e-171
NC_020209.1\|WP_003230606.1\|2081248_2082604_-\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.08915e-46
NC_020209.1\|WP_015372173.1\|2099768_2101763_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	7.64402e-67
NC_020209.1\|WP_041931481.1\|2092448_2093843_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.26133e-25
NC_020209.1\|WP_015372158.1\|2049308_2063198_+\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NC_020209.1\|WP_015372164.1\|2082795_2083176_+\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.12069e-26
NC_020209.1\|WP_015372166.1\|2085586_2086045_+\|transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	2.54989e-10
NC_020209.1\|WP_015372161.1\|2077008_2078649_+\|cyclic-peptide-export-ABC-transporter	gnl\|CDD\|226968	COG4615, PvdE, ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism].	5.174e-144
NC_020209.1\|WP_003230587.1\|2094359_2095979_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.13329e-65
NC_020209.1\|WP_015372168.1\|2087765_2088758_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.87175e-115
NC_020209.1\|WP_015372169.1\|2090719_2092252_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0

>NC_020209.1|WP_015372166.1|2085586_2086045_+|transposase
MSLQPNSHLLRRGRYSEPGRAYLVTAVVHQRLPLFRNFRLGLLLVNEFKRAHETGRVNSLAWVVMPDHFHWLFNLNDSTLADVMRATKSRSTLSINRARCSRERFWQRGYHDRAVRAEEDIRRMARYIIANPLRAGLVEHIGDYSLWDAAWL
>NC_020209.1|WP_015372165.1|2083256_2085236_+|U32-family-peptidase
MSLPKHHLELLSPARDVAIAREAILHGADAIYIGGPSFGARHNACNEVSDIAQLVEFAHRYHARVFTTINTILHDNELEPARKLIHQLYDAGVDALIVQDLGVMELDIPPIELHASTQTDIRTLARAKFLDQAGFSQLVLARELNLQEIRAIADETEAAVEFFIHGALCVAFSGQCNISHAQNGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNNQSANIRALVEAGVRSFKIEGRYKDMGYVKNITAYYRQRLDDVLEDRTDLARASSGRTAHFFLPDPEKTFHRGSTDYFVSDRKIDIGAFDTPTFTGLPVGTVEKAGKRDLQVVTHEPLSNGDGLNVLIKREVVGFRANIAEPKGEFEEDGQKRYRYRVEPNEMPAGLHQLRPHHPLNRNLDHNWQQALLKTSAERRIGLAWVARLREEQLEVTATSEEGISASITLPGPFGVANKPEQALDTLRDLLGQLGTTEYHATDIALDAPQAFFIPNSQLKALRREVIEALTAARVAAHPRGGRKAETSPPPVYPDAHLSFLANVYNQKARDFYHRHGVKLIDAAFEAHEETGEVPVMITKHCLRFSFNLCPKQAKGVTGVKTKVAPMQLIHGDEVLTLKFDCKPCEMHVVGKIKGHILGLPQPGSVVGHFNPENIIFQGTH
>NC_020209.1|WP_015372164.1|2082795_2083176_+|RidA-family-protein
MANHDLTFTPDPDADSISSDVIGFNGILMSTQIPTHADGSLELGDITLQSECTLQALKVALEKAGSSMDRVMHLTIYLTDMADRAAFNAVYTRFFAKPWPVRAAVGVAELAVKGMRVEVTAMAAKA
>NC_020209.1|WP_003230606.1|2081248_2082604_-|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MFNKSLKTELAARTAEVTEYKGLIAALERSMAVVEFDLNGKVLRANDNFLKTLGYSAAQLAGKTHRDFCLPALTGSPAYATFWQDLRAGKFVSGTFKRVDANGKVIWLEASYNPVLDERGQVLKVVKYALDVTANVEQEAATRSKLVALDRAMAVIEFDLSGQVLDANPNFLNVMGYSLAELKGKHHRLFCEPALINSNEYTDFWRRLNNGEFFTGQFKRLGKHGRVVWLEASYNPVFDSDGKLIKIVKFASDITERVEKFEEDSRGASRAYHISSETERFAEHGTQVIHDTATEMRRIAENIGASAKLVGQLGERSEQITAIVNTIRGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRQLAGRTSRSTAEIAEMIGMILSETRDAVSSMNATQEGAQRGVNLADQAGSVILQIRTSTSDAVQAVSMFASKLDESEVIPKTAVGWMG
>NC_020209.1|WP_015372163.1|2079522_2081226_+|ABC-transporter-ATP-binding-protein/permease
MHTLRNFWRLARPFWTSEQKYPALLLLLGTVLMNLCLVGVNILNNFWNLHFYNALQAKDYPGFMLGTGQFILLQVGLAVFTVGAFHFQQKLTIVWRRWATRNMLDQWLGSQRYQKLKMSETEVDNPDQRIAEDIDLFIIKSLKLSLGLLTAVVSLFSFLNILWQASDLIRIPLGDGGLVIPGLLVWVALVYALAGTGFAFWLGRALPHLNFMQQRREADFRFSLMRLRENADSVAQYRGEAVENQRFKQRLEAALQNFWVLVKKQKLIMGYSTFYLRSATVIPMFIMAPQFFAGVFTLGRLTQISAAFGEVHAAVAYLVGVFPELAEWKSVIDRLHGFQKRLDNVKVDSAVVLTQQRDGLHVRNLDIWLPDGCRLFSGFNLALKPGESLLIRAPSGYGKSTLIRALTGLWHHASGSVAYDRERALTLSQKNYLPLGSLRETLWYPNPAPAGQDAVVQRLLDQLGLAHLGAQLDEERDWAQTLSIGEQQRCAFVRALLARPAVLFLDESSAAMDAANEARCYQLLKDTLPQTILISVGHNAALERFHGQVLELRDEVDWVRRAVRQPV
>NC_020209.1|WP_015372162.1|2078639_2079296_-|siderophore-iron-reductase-FhuF
MRPVLAEFALRYPGVNNAAVVSQWSMNYMSIVVPATLACVLTRDQAIDFWRDDSVLRLDAGQPLALHFAGPLPALAAAERADYFSRWVHEHLAPLFATLALAGGLAPKILWGNFVAIWDGAFARLDPDLSRPGFAEAHRWLEPVTVNQGRLKLRGLQRQVASPAPEICPQLPLRRHCCLHYQLHPLVEGEPLVLCESCPKLHRLPLAEQVGYLHSLYD
>NC_020209.1|WP_015372161.1|2077008_2078649_+|cyclic-peptide-export-ABC-transporter
MDLLILMAKRSWRALLVATLTGLACGLAAAGLIAMINHSLTVFDQLRPIDGLYFGALVLLVAVSRIISDISLLRLGQAAVNDMRLHLSAKLIDTPYAQLQRLGKHRLLAVLTDDTQTISQAVELVPVLLVNGGIILACLGYLGWLSLPLLGLTVLLIVLGSLSFNWPQRKALTSISRARELKDQLFEHYRLLTDGSKELQLNHPRRQHFFSRLLLPTSQQYRRDFVRGMSIYAVVLNWGNAVFYLLIGVVLFVAPRFIDLSVSLVTGYILAILYMITPLSELMHAVPTLGRASVALNKIRALEGQMHSADETLETFAPTQVRSLVCRDVTHTYYREREDGHFTLGPISVTLKAGEVVFIAGGNGSGKTTLALLLTGLYRPEGGDVMLDEQVSSSADNHHFRQHFSAIFTDFCLFENLFDGDNPKLVQQAQDYLVHLQLDHKVQIEQGRLTTLALSTGQRKRLALLSAYLDDRPCYLFDEWAADQDPVFKHFFYTRILADLRARGKLVIVISHDDAYFGLADRLLRIEHGRLSEAPLAAGVALEAQS
>NC_020209.1|WP_015372160.1|2073282_2077008_+|non-ribosomal-peptide-synthetase
MSNHEAAFALSPQQRSQWLANAPAARLVLQVHGATALAQLRERLAALAQVHDALRLHTRPEPGMQVPLQRVGADSVVSIDVQALDAEVQRVTVQLPALAADRGTLLRLVQALGAAQPPQADAEAMTYTQYSAWIHDLQADEDAAQGRQYWADLAVGQQAGTELLYREARNDRADTPLTTCVKLDPVLSAALQAHAAPAEHLLMAAWGVLLQRLSATDSPALTLNWVHDCRDDYEELADCWGLFAKALPLPWQAALERPFGEALATMQTQCEDVGEWQEYSPADASSPYGFQWSPALDAGASPFKVLEVAAIPAGMELLLIAEDHRLTLCHQASRYSTRAAETLLEQLQSLLRDALAHPARPLAELSLAAPGFAATLAARHQGVTPPFASVPARFNACAPGFAEHLALRDSNQHLSYAELHARSNQLAHYLRGQGIGREDRVALYLDRSAPMVLAMLAVLKSGAAFVPLDVHQPAQRSLAILQQAQPRFVLTGAAGGAPLLASMGSLDLRDTALWQQAPMTDLGDDVLPSDAAYVLFTSGSTGVPKGVIVEHAQLASYVSSVSTRLQLQAGERSAVVTSLAADLGYTLLFPALLSGGELHLLDKITAMDAQAWAAWQAHYPVDHLKIVPSLLDAWLMHAQSAAVLPRRQLILGGESCSQRLLQSIRQFAPGLTLFNHYGPTETTVGVAMHRLDPACDYRRLPLDDRLDGMRLYLLDEQQRLATPGQHAELYIAGPQLARGYLDTPHTAERFIERDGERLYRTGDRARYRHDASLDITGRSDRQVKVRGFRIELDEIQAQLAGLPGVAQAAVECLPKGELGQQLFAFVTLAPGQSMSVAQLHGQAQDRLPDYMLPSLRIVEALPLMGNGKLDRKTLQEWADQVQGGVGGALPRTPLEALLAQTWAQVLGLERVGIEDDFFALGGHSLAAVSLASRLQTVLAAPVTVNAVFNAPSVAAFAALVQAEFKLSPLARLSAPGAGANLFCFHPSTGHVQDYRPLLPHLPHWQLWGLQKLGDDDTVGDGDIDGLAARYVEHLRAQQPHGPYHLLGFSLGGLLAITAAAQLERCGEQVAFLGILDSQYARSADEDSIETLLADAAQALTANSQAVLRGLPAQAMAELTAQLAALPAAQRLPALAQWAQQQGLQLDGDSWEHLHTRLGHQQQTRQLLASFQPPRLRCPVQVWWADATLGEADFADPQWQQLSSGAYTCEVVQAQHLNILAQPSVHQQLAAGLAALATDGAV
>NC_020209.1|WP_015372159.1|2063245_2073286_+|non-ribosomal-peptide-synthetase
MNNIEDIYSLSPTQHGLLFHSVVEPDSRVYYQQLSLEMNGPLQLPAFRAAWQALMQRHAVLRSAFLWEDLDDAYQVVQSELSLPLSELDWQGRSDSDTALQQLALDQRAEPLELNDAPLMRVALVRLEPQRWHLIWTFHHIIMDGWSVGIAIQEWQALYYEHAHGRPANLPPTRAYRDYIAWLAEQDMAATESFWRGQLQDVSEPTPLPDFGLRLTAPADAPCAEREHRLSIEETEQLAQFARRHHLTLNTLIQGAWALLLGQHAGRDDVIYGVTVAGRPENLAAIDSTVGLFINTLPLRVQWSEGPALVDWLQQLQQANSDLRHHAYLPLGKLKSMSRIAAEQALFDSILVFENFPVTDALNQDAGGLSFADPNREHSSDGLTLTQGRNHFPLSLIVVPGEQLHYLFSYNRSRFSDEEIALLSAQLRTVLLAMAALPQCRIADIDWLGAQEREQLQALGRGAALAVPHLGLHQRFEQQVAAAPEQPALRDRDGVLSYGELDQRANRLSQHLCAQGIGRHSQVALGLERSADFVIALLATLKAGAAYLPLDLKQPVGRLADVLQDSRAALLIGATATPLLTRLGEHTPLLCLDAQAAAIAARPATAPVVEHSLDDAAYVIYTSGSTGTPKGVVVEHRAIVDYLSAVHSVLQPPAAARYGLLSSIAADLGHTQLFGALCSGASLLLVDDESAFSPLALAQLFSEFPVDVLKITPSHLSGLLQALPDARLLPTALLVFGGDALSPALLAQVNTLAPGLRVFNHYGPSEATVGAIATELTAGQPRIALGRPLPNRQLRVVDAQDRDVATGISGELLISGALARGYLHRNDLTAERFHLDERQQRWYRTGDRVRWLVDGQLAFLGRVDSQVKIRGNRLELGEVEAQIRRLSPLIEQVVVRALDLEGSLRLVAYLVASQSLSALKLRNDLGSRVPDYMVPAHFITLDELPLTRNGKVDVQRLPLPHATRDDSADYVAPRNDVERLLAAIWQDVLKREQVGVNDNFFAIGGDSILNLQIIARANQQGLKLTPRQLFENRTVADIARVLGADASQAVAQQQAEGYGLPLGAGQRARPEQGPLTATWRCVALAQPLDSGLLGQALAALQHHHQALRLGFDADWQQRVLAAPKAAAISSGEYLPHQLQALAQAAVDELDLHAGQTLHASLLGDGHLLLAAHPLCVDDASWPLLLTDLNLALSQLRLQRPVRLSYHGGNFTPWARHQQDHAHSDALDDAWEHWLQFAAMDTLQLPASGQPSQVVEHSLSDETSGALKRLAEVLHLDWNSLLATAVAEQCGHGLLALDMYAARPAAERLPVQSPIAFADLEPQRIIGALDLPVPVFLHTDAGTALQRLHVVAAQLRAYPQHGADYGVLRYLSDNTYLQEPLLDLPKADIAIHWRGDLDSHREPHGALAQVTAADLPVATAHALHIQAHWQDGQLHLRCEGPLAGHWTLQLAERLASLAALAAAPDLRPDSAAFPLCHRQAATLAAEPLDWSNLEDVYPLSSMQQGMLLHTLLQPHSGIYLMQQRYSWDGVLQRPAMEMAWQVFLDRHPMMRTAFRWQDDHEPLQCVYRHTAPAFDWQDLRHLDDAQQRKAMDQALEAQRVQGFDMAVAPLTHLRVFQLAERRFAVVRSFHHILTDAWCFGLLMEDLLAIYQAVVHQEPVARPRFRSFRGYMSWLERQDMAAAHAFWQADLAGFSEPTPLHLDGAPARAEQAPEAVGDLDQTLSISQTQRLQQLCQHYQLTPNTWIQGAWALLLSRYSGNRDVLFGVTVAGRPTELAGVEEMVGLFINSLPLRLDVDPEAPVAGWLQALLSHNARLREHESASLVDIQRSSGVPRGQQLFDSLVVFENAPLDISSVQLDAFSIDIYEDRVHTNFPMTVVLYPGDRLGIRLSYDSQRFSADSVQRMLGHLVQLLSSMLEAPEATLGSLHMLAPAERQQLQVEWNRSAVDFPLTQGYAALFAEQVRRRPQQIAAVHLQDSLTYAELDRRANAVAHALHRAGAGPETLVALFAERGLTLLTLMLGTLKAGAAFQALDIQQPAARLAELLNLGEAPLLLVCDSASGVLEGVLPQLLKQPTCLVAQALWQGEARPAVTYTHNPEQLAYVIFTSGSTGTPKGVMVEQRGMLNNIFGKVPALGLGEHDRIAQTASAAFDICVWQFLAAPLVGATVHILPDAEAHDPLALLEAVQTQQLTLLETVPALIRGLLQEARDEHRLPTLRWLLPTGEALPPALARDWFARFPTIPLMNAYGPAECSDDVAFYPITQAPDADCLHMPIGRPTANNQVFVLDSALRSVPIGVPGELCIGGAGVGRGYLRDPQRTREAFVDHPFEPGARLYRSGDIGRLRADGVIEYLGRRDQQVKIRGHRIELGEIENRLMQHPAVQSAAVLALPDARGALQLVAFPVLDSAFDGDAQSVLSAHLAAQLASYMVPARWVALAQLPLNANGKVDRRALAALDMPQAAAADGVSIAPRTPTEKVLAELWQAILGVPSVSVHDDFFAIGGHSLLATQMLSRIRRRLNVSLPLRVLFEGGTLEQLAQVVDQQAQVADEDEIVPVPRNRTLALSYAQQRLWFLDRFEGPNAAYNMSSVVRLRGALDIAALQQALQHVLQRHESLRTSFHLDGEQPCQVIHPAPTLDLTPLTVQADALQTVIDQQSAQPFNLQQPPMLRAQLLHLGADDHVLQLVLHHIATDAWSMGILIQELITGYQAYTGGTTPVLAALPIQYADYAQWQRSEAQQRHLARAIDYWRRQLDGAPMLIPLPLDAPRPTQPDYQGASLIQHFNPAQTQVLKAYAQAHKATLFMLLLNAFNSLLQRATGAHDFIVGTDLANREQAALENLIGFFVNVLPIRARLDANDTFDSRLQRLREDCLAAFQHQQVPFDKLVETLQPPRIAGVNPLVQVLFVMQNTPQGTASLADLAVEHLEPQQQTSKFDLAVFVEEDDSGLQVRWVYRTSVLQAQTVERLEQGFAQLLDSLTLQDWTWRLHADAPAAIDETQARSERKQSKMSKLKNTRATAVSQLAHEQVRTRTLGEAQPLPLVIEPLLTDLDPVHWAVQAREWINAQLRTHGGLLFRGFNLPDAAAFEQFAQAIEPDLYGTYGDLPKNKSGKNIYHSTPYPEQHMILFHNESSHMAQWPRKQWFFCEIPAPRGGCTPIVDCRQVLAQLPPDIVARFKALGLLYVRHFTDKLDVRWQDFFKTEQREEVERQCRQSGMQWEWLGTDNLKIAQQCPAIVAHPDTGEASFFNQVQLHHSACLEPEVRSNLINLFGAGNLPRNVYYGDGSVIEDAVMAVIGAAYEACAVRFAWHKGDMVMLDNMLVAHARDPFEGERKICVAMGQMMNREQLGEQP
>NC_020209.1|WP_015372158.1|2049308_2063198_+|non-ribosomal-peptide-synthetase
MTTDQTTRNPIEDVYPLSPLQQGMLFHSLLHEDSGVYLMQDRYRIGGAIDETAFLEAWRQVVALHPSLRASFQWKTQKQPVQVIHREVKVPLDTLDLRELAPHEQQARIRALLEEEQKVGFNLSKPPLIRFRLVRLADEAYEFIRSFHHILMDAWCISLVTVDFLKVYEALCNQRTPQISSPRPFRDYIQWLQRQDAGKAEQFWRDQLQGLNAPTPLTVDNGVTRDRYTDAVLVDDQLIHLDAQHTQALASFCRSRRITPNTFFQGVWSLLLARYSGQRDVVFGVTVAGRPAELTGVAEMIGLFINTLPLRVNVDPEARLGDWLSDLQALNVQMRHFEHTPLTDIQGWSDFPRGETLFDSILVFENAPIDEQILDGGFQFSLDGMDHSVHTHYGLTVVILPGEQLGIRVSYDRERFTAETVQRLLGHLASLVHGMLAAPEAPLGSFDLLAADERNQLLGDWALNPHDFPLDKSYAELFAAQVAERGDQVAAICDGQSLTYAELDLRATRLAHALRAAGAAEDQLVALLAPRGLALLTAMIAVFKAGAAMLPLEVNHPPERLREILSLSRAPLLVASEDCSGLLDQLLSGLDHAPQALFAEAAWNIANDAPLAPAGTPRSLAYVLFTSGSTGTPKGVMIEQRGMLNNIFGKVPALGLKAADRIPQTASVAFDISVWQFLAAPVLGATVHILPDEVAHDPQRLLQVLASERLNVLEIVPSLMRTLLALCPCDLQLPDLRWVLPTGEALPPTVARDWFARFPAIALMNAYGPAECADDVAFQPITEAPHASISHMPIGRPTANNRLYVLDEALRPVPIGVVGEICVGGVGVGRGYLHDPQRSAEAFIEHAQIDGRLYRTGDLGRWRADGVIEYLGRRDQQVKLRGHRIELTEIEHRLAQHPNVREAAVLLRENSVGEAWLVAYWSAHDESLGNSGLSEHLRAQLPPYMVPAAFECLDRLPLNNNGKVDRKALAALQLTWQADARESLAPRNEHEAAIAAIWAQVLGRDSVGVEDNFFTLGGHSLLATQIVARLRSTFKLELPLRVLFEQPTVALLAVAIAAREAQAAAPQAAAVNAPHAKPRPALLPLSFSQQRLWFIEQLTPGTTLFNIPFALRLSGQLDVAALHASLNDLLARHEILRTGIRSVDGVPSQHISAALSIELPFEDLSNLAATAREGAQFNALQATFEQPFDLTAPPLLRACLLKVAPDEHVLGIALHHLVSDAWSATIALRELAQGYEARCHGSAVQLPALPLQYADFALWQREHLQGAELARQLDYWTRTLDRRDQDASPLLALPTDHPRPSVQSYRAGLVQRELSADLSGRVQALASRLGTTPFSVLFAGFAVLMHRLSGDATVLIGTPVTHREQPGTEGLLGILLNNLAIRADFSAQADFSAVVSQVATRLREGLQHQDLPFEQLVDSLQLPRSLSHAPLYQVMVAQQLGMESRLQFPGLTYEALDTPLKQSECDLDLHVLCPADAPIQLELMFALDLFTQDSARQTLARLEHLLEQLLAEPQRAVATLPLLMPAEWQRTVVEWNRTEMAVPLHLTFAQLFEQQAERTPERDALCFEGQCLSYAELNRRANQVAHYLRGQGVVANSPVALCVERSLELLIGLLGILKAGGAYVPLDPSYPAERLAYMLDDAQPLLFVGQHGLLDSLGSHLPRLRLDADTALLVSQPESNPAALAGPDDLAYIMYTSGSTGKPKGTLVTNQSVVNLAWARIHGLYRRYTDQPMRTSFNYSFAFDSSVAELILLLDGHSLYLTPEDVRYDPAALAQFFKDTRLDAFECTPAQLKNLLDTDGVRRGQTYLPRFVLFGGDAVDAQLWQRLPSIAGSRFFNTYGPTECTVDATGCAVDDFPQRPIIGRPIANVRTYVLDAFLNPLPVGVPGELHIGGAGVTRGYLNRAEQTASVFINDPFSPLPGARMYKSGDLVRWLPGGQLEYLGRMDHQVKIRGFRVELGEIEALIGAQPGVRQAVVLAREDVPGDKRLVAYVSCDQPDLSAWRNALGAALPDYMVPSAFVVLEQLPLTDNGKLNRKALPAPHAQPEPDATDLPRTDAERQLAALWAELLHLPLSAIGRDSQFFYLGGHSLLAAVLFARLRQQFATVPPLRAVFEHPTLHALAALLAQPLQTPRDTFVPAARPARLPLSFEQQRLWFLEQLSGASEYNVVSAVQFDGELQVPALQTALNSVIQRHEILRSRIVREPAGELVLVIEPPVDLTLAVTHWDAVTDAHWQQLSEDAIEAATAQRFDLAREAPIRAQLLKRNTQALLVLTLHHCVTDDASTQNLLDELARCYKGEQHSLPTLALQYPDYALWQREAAQQARFDSQLAYWRTQLEDGSYHLELPTDQPRPHLLDPRAGSVQLQLPAELTARLRHFAQQRSATLYMLLLSAAQLLLGRYANQRDVRVGSPVAQRPLAELQPLIGCFVNTLVMRADLAPGLDFAGLLDQVRNTVLDAQQHQDVPFDQLVEHLAPERSLGQTPLFQVLFVMQNGTDDANQWPHLQVRERAVTAAATKFDLNWEVHDGEVLSVLLEYRSALFSQATARRWLTQWQALLENMLDAPQTLIGQWSPLTDAERLQQQAWNATQRHYPGPTDLHTALSQQAALTPDAPALVFGNQRLSYAELDQRAQHVARALRASGIGRESIVPVCMERSVEMVVALLGIVHAGAAWLPLDPELPAARLAFLIEDADARVTLTQPQWLSRLPAGHNAWTLDSLPAHSDAEPLSVQPNDLAYVLYTSGSTGQPKGVMNEHGALMNRLHWMQDACPIGPNDRVLQKTPYSFDVSVWEFFWPLITGATLVVARPDGHRDPAYLSQLIQQEQVTTLHFVPSMLRAFAEEPSLADCISLRQVFASGEALPVDLVQRFMGRHPAALVNLYGPTEAAIDVSVWRCSVDDAVVPIGKPIANLQLHILDDQQQPLPIGTAGELYIGGVGVARGYLKRDDLTAERFLTVNGERLYRTGDRCRFLADGNIEYLGRLDHQVKLRGQRIELGEIDAALLAQAQVREAATLLIDQRLVSFWSGDAHEADLRAALARQLPSHLLPGLLVQLDHLPLNPNGKLDRKALAAIRLPEANREQPHRAPRNANETLLCELFSEVLHCPQVGIDDHFFQLGGHSLLATQLVARVRERLGVTLPLARVFAQPTVAALAAQLSQALPGEQITPQPRPAVLPLGLAQQRFWMLSRLVPQSREYHMPFALTLTGALNVPALRAAFDQLSERHLVLRSRIKEMAGQAQLLIDPQGPALQVTSVAESDWNSACSRAQTDLMAPFDLANAAPWRAHLLQRQGSDEHLLLVCLHHSATDGWAMRLLIDELAQAYRAGLHGQAPEWTALPIDYVDFSLWQQHPHTQALREASLAYWKNHLGPDDYRLELPLDQPRAAEADRRAGQLNLSLGRERSAAIRHFAQQRGTTPYVVLASALSALLARYSGQREIRLGTPADQRDQPQTQTLLACLVNTLVIRSEVDPQAPGAALLDAVEADLRAAQAHADLPFASLVSAVTQRRDLNRTPLFQVLFSLNHGHMDSRQWPGLALQERTLPAIDAKFEQSWEVHDDGSDMTLALEYQAALFNATTMQRWSAQWCALLDALVATPERALVELFPQQQDQAQLAQWNATERHYPGPTDLHTALNQQAALTPNAPALVFEGQRLSYAELDRRAHTVARALRGAGIGRESIVPVCMERSVEMVVALLGIVHAGAAWLPLDPELPAARLAFLIADADAPVTLTQPQWLSRLPAGHNAWTLETLPSAENGEPLNVQASDLAYVLYTSGSTGQPKGVMNEHGALMNRLHWMQDAFPIGPNDRVLQKTPYSFDVSVWEFFWPLITGATLLVARPDGHRDPAYLSQLIQQEQVTTLHFVPSMLRAFAEEPSLAACRSLRQVFASGEALPADLVQRFMSRHPAALVNLYGPTEAAIDVSVWRCSVDDAVVPIGKPIANLRLHILDDQQQPLPIGSIGELYIAGVGVARGYLKRDDLTAERFLTINGERMYRTGDRCRFLPDGNIDYLGRLDHQVKLRGQRIELGEIDAALLGQPGISGACTLVIDNRLVAFYSGAAAEADLSSALSAQLPAYMVPAVWVPLPSLPLTTNGKLDRKALTALPLPQRQEEAVAPRNALEGLVCQLFSDLLGDSLTGGRAVSTADSFFALGGDSILGLKLISQLRDQGYALTPKDLFRAQTPAGLAQLITPLRAVAEQGDISGAMPLMPLHQWFFDQQQPQPAYWNQSVLADSARPLQPALVQQTLDKLIAHHDALRLRFSEVDGQWQAVIATVEPARLTLATQARQLQEVAQSLDLQHGPLFAAALLEGTPQRLYLVAHHLVIDAVSWGPLLEDFQQVYAALESGAPVVMPAKTTAYRQWAEQLHARAASPEQPYWSRQLGVNPMPQATVAERQTLSARWDATRTQQWLTESHAAYRTQPEELLIAALVATLAEVDQRQEVVVDLERYGRDAGFEGLDVSRTVGWFTTLFPLRVNARGSVGDWARQAKEALRAVPSQGLGYGLLRLRGELPAGSGDVLFNYLGHEQPPAGWLRASTLAAPAEVAPANRVSHAREVVAWLEDGVLHLHWHSVSAEVDRDLPARLLTHLQALLEHCLDPTAGALMPSDFPLAKALNQKSLDTLLGKLKSKPNS
>NC_020209.1|WP_015372168.1|2087765_2088758_-|LacI-family-DNA-binding-transcriptional-regulator
MVTMDDVASKAGVSTSTVSHVLNGTRKVSPATVLAVQRAIQALGYIPNTLARSLARSSTSTIGVAISALSNHYFSETVHAIETECAKHGFMMLFVDTHDDPEQELRVITALHHRRVDGIVLAPSNGSMALEYLSANRIPAVLVDRMMSGQFDQIGVENTEATQGLIAHLIEHGHRRIGFIAGRPGFSTTDERVEGYKAALQAAGLPFDPQLLVNGGSNTEPARRATVQLLALDAPPTAIMAGNNLMTLGAMHALRDAGLEVPTQMALVGFDDFDWADFFVPRLTLIAQPVQALGTRAVNLLLQRMATPGAPAQSVRLTPNLQVRNSCGCH
>NC_020209.1|WP_003230593.1|2088779_2089712_-|ABC-transporter-substrate-binding-protein
MNLKRLFPVMALAALMSQAVEARELKALGISMGSLGNPYFVTLADGATARAKELNPNVKVTSVSADYDLSKQFSQIDNFISSKVDLILINAVDPSAMASAIKKARDAGIVVVAVDVDAKGVNATVQTDNVEAGKLACQFLVDKLGGKGNVIIQNGPQVTAVTDRVKGCKAALAGAPDMKVLSDDQDGKGSREGGLNAMQGYLTRFPKIDGLFAINDPQAIGSDLAAKQLKRSGIVITSVDGAPDIENALKTDTQIQASASQDPWAMAQTAVNVGNDLLNDKAPAEAITQLTPKLITRDNVGSYSGWSSKR
>NC_020209.1|WP_003230590.1|2089746_2090727_-|sugar-ABC-transporter-membrane-protein
MAEVNVATTTGKAERVRELMRTVGMLPVLVLLLVGFALASENFLTMQNLSIITQQASVNVVLAAGMTFVILTAGIDLSVGAILAASAVVALQASMSPQFGMFGIAAGVGFGLLLGLVNGGLIAFMRLPPFIVTLGALTAMRGLARLLADDKTVFNPDLPFAFIGNDSILGVPWLVVIAVAVVALSWFILRRTVMGVQIYSVGGNPEAARLSGIKVWKVLLFVYAMSGALAGLGAVMSASRLFAANGLQLGQSYELDAIAAVILGGTSFTGGVGTIGGTLIGALIIAVLTNGLVLLGVSDIWQYIIKGIVIIGAVALDRYRQSGART
>NC_020209.1|WP_015372169.1|2090719_2092252_-|sugar-ABC-transporter-ATP-binding-protein
MSLEPLLEMQGISKTFNGLRVLKSVGLKVFPGEIHALMGENGAGKSTLMKILSGAYQADPGGEIRIDGQSVPTFTPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGWTIDRKGMQAGCVDVLQRLGAEFTPATPVSSLSIAERQLVEIARALHAHARILVMDEPTTPLSSRETDRLFALIKHLRSQGLAIIYISHRMAEIYELSDRVSVLRDGQYIGELTRDALSAEVLVKMMVGRDLSGFYKKEHAAYNPGNVVMRVRDMADGKRVRQCSFDLHAGEVLGIAGLVGAGRTELARLIFAADPRTSGTLEVVGKTVTQLRNPADAIRAGVVYLTEDRKAQGLFLDMSVADNINVCACVPDAHAGGVLDRTHASQRANDAIKSLSIRVASGKVSVGSLSGGNQQKVLLARLLEVKPHVLILDEPTRGVDIGSKSEIYRIINQLAQAGVGIVVISSELPEIIGTCDRVLIMREGQLVAEVGGASGHAISQERIIDLATGGDQVVAHG
>NC_020209.1|WP_041931481.1|2092448_2093843_+|acyltransferase
MAAIAIPLYTAGLRKAGPGTIPVWIPQDENSEMIAQNKSQYISIQMVRGIAALLVVLFHSHIAIDMMPAGYKVDIPFVYTRGHWAIYLFFVVSGFIITHVTSGEKFKLFPFLGKRIIRIYPIWWLSFVFALIGVYVFNVSFSYGTPLDTASYINSLLLLPSTIKPINSVGWTLIFEMLFYFVSALVLIRYSHRMLMLTLLLLFGIGAVLYSISPNHPWLINAVGHHLFSPFQLLFAAGIALYLYQQKLAWIHPAAGFALSVATVAGIINAPSATLGSGELYFIVLGVALASSLLIVALLNAERRGWLHSTNKGIAIPVSMLNSAGNCSFSLYLFHWGIFTIVGSKATQAYLQLPAWTAELWRFGWIAISIAVAMFMYRFFEAPISRHGGRVIRRLSAPQGPALPADPREWTTQHKVALVIEILSQKITIKQACETFNLELKQVEQWLGAAQKGMEGAFQPIPLD
>NC_020209.1|WP_003230587.1|2094359_2095979_+|methyl-accepting-chemotaxis-protein
MRLRNINLAPRAALFFASIICLVFVLGVFAVQQMGKLRDSEKDVELNWMASIRQTSLMNATALRLRLETQRGLADPQSIQKNIESFAGYRKAFNDAVANYEPLVASDKERSFYTPVTKSAEAYSQQLDILEPLMRKGDIPAAISLVSNNIRPLTNAMEGQIKDLTTFNDEGAAQAGQTATDLYNDGLWLVIGLITGVVLLTVALALLLTKSITSPISAALSVAERIAASDLSREVSVSGTDEAGRLLKALAQMQTNLRATIIQISDSSTQLASAAEEMTVVTEESSRGLVAQNDEVNQAATAVTEMSAAVDEVARNAESASEESKRTQGYTEVGLARVAQTLKSIQKLNGNVENTSAQIQGLSDRAQSITKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQVSTQEIEQMIAAIQGDSDLAVKAMNTSRDLANESLGVAQEASTSLDQISHAIIQINERNLMIATASEEQSHVAREVDRNLVSIRELATQSAAGASQTASACGEMSKLAVNLNQLVNRFAV
>NC_020209.1|WP_041931482.1|2096436_2098716_-|acylase
MIITNGLSSVCMAGLLMGVSLAASAREQVTPASADIRRTTYGVPHIRATDERGLGFGIGYAYAQDNLCLLANEVVTVNGQRARFFGPDQATLEERNNLASDVFFNWLNTPQTVAAFWKAQSPEIKQRIDGYVAGYNRYLQEQGAPAQCQGAWVRPLAAEDLVKLTRRLLVEGGVGQFAEALVGATPPQATASVQPGAKAFAVAAANQQRFSLDRGSNAVAVGRDRSFNGRGMLLANPHFPWVGGMRFYEMHLTIPGQLDVMGAALPGLPVVNIGFNQHVAWTHTVDTSKHFTLYRLTLDPKDATRYLLDGKSVPLAKTSVTVQVKQPDGSLKAVSHPVYSSKFGPVVQWPGKLDWDNQYAFSLRDANLDNDRVLQQWYAMNRADSLKALQTSVHTLQGIPWVNTIAADDQGQSLYMNLSVVPNVSAAKLAQCSDPRAGLQMIILDGTHSACAWDIDPHAAQTGIFPAHQLPQLQRTDYVQHSNDSAWMANPQAPLTGFSPVISQDHIGLGPRARFALQRLHALEKHPISVADLQSLVMDNEVYLAGQVMPDLLAFCAKQLGTDADALQSLCSSLKTWDQHANLDSGLGLLHFINLMEHLQQIPDAWRVAFDPANPLTTPLGVAIDREPVAKALREAMLASTAAVGTLGAARWGDVQVSGQTPMHGGPQELGIYNAMQTVPRADGKREVVSGTSYLQIVTFDDHGPQAIGVLAPSESSNPASEYSTDQTQAFSEKTLRPLPFTQAQIQADPQYQTQRIKE
>NC_020209.1|WP_003230583.1|2098953_2099334_+|hypothetical-protein
MYNPPVTTDGHSSAADAQFGSGTQAFGKTPEQQGNQRIRHLLKCFGLRTSLIRLKVIDALLTAADNQRTLGVRGVHGHLLELGIPLSFLSVREVLKRLCSEGVITLNADKSYSLHEEAAKVLEGRA
>NC_020209.1|WP_003230581.1|2099340_2099535_-|hypothetical-protein
MTQKQRLKYSILISLVVLSSMFGLSYLQNTGVISEKTFQYIAIAIAVVVVVINGIMRRKVKPNF
>NC_020209.1|WP_015372173.1|2099768_2101763_+|methyl-accepting-chemotaxis-protein
MPALRSIQARYTLFLLLFVLVLIVLTVVGIGQLVAPTLRHTEEQVVLNRVAQVAERIQGELNKVQAQQRSITQTIPLLDSDAIDKVLPGLVDQYGELKVFGGGIWPLPNQRTPGRNKHSTFWHRDASGKLAVNTFWNSDPAPNYYDQSWYKGGLASPPGQCAWAAAYKDDASQEPRTNCAMAIQRDGAAYGVSTIDVTLGFFNDLVAAKEKDIGGQMLIVEADGKIISNSTRFSSPVVLKNISELTGTSAFAAQVSKALAQREQGLQRSEFDNGGVASTFYMRPIEGTPWFLATALPTSLITAQRDDVLGSLALLQIPMVLLLVLLAAYAIRQLVQRMKSLTSNIDALSAGDADLTRRITIRAEDEMGAIGHSVNRFIVYLQNMIGEVTQATGAMSSGLEQLQRTSAHTNQILVRHASETDQTVTAITEMSSTADTVAQNAAETAAFTQRANEHADRSRVVVGEASTSVGALIGEVSSATHSVENMRQDAARITETLGVIGAIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTSQINEMLARLTAGVSSSVAAMENTQASCQSAADATARVNTGLDEMAGSVAHINNLSTQIATAAEQQSAVTEEINRSMVQIRQMVEELVESGHATETNTQSLLEANGRVISLMGRFKVQ

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Crispr_ID: NC_020209_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_020209_3

5037797-5037875

Orphan

Consensus_repeat	Method
AATGTGGCGAGCGGGCTTGTCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_020209_3

>merge|NC_020209|3|5037797-5037875|CRISPRCasFinder
AATGTGGCGAGCGGGCTTGTCCCAATGCGGTTCAGTTAAGGAAAATGTGTGGGTTTATTGTGGCGAGCGGGCTTGTCCC

>NC_020209|3|3|5037797-5037875|CRISPRCasFinder
AATGTGGCGAGCGGGCTTGTCCC	AATGCGGTTCAGTTAAGGAAAATGTGTGGGTTT
ATTGTGGCGAGCGGGCTTGTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_020209.1\|WP_015373497.1\|5040427_5041423_-\|D-cysteine-desulfhydrase	unknown	unknown	gnl\|CDD\|179673
NC_020209.1\|WP_003236065.1\|5030119_5030764_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NC_020209.1\|WP_015373499.1\|5047983_5050320_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NC_020209.1\|WP_015373492.1\|5031865_5032681_-\|amino-acid-ABC-transporter-exported-protein	unknown	unknown	gnl\|CDD\|224381
NC_020209.1\|WP_015373491.1\|5028071_5029970_-\|hypothetical-protein	unknown	unknown	unknown
NC_020209.1\|WP_015373500.1\|5050675_5051416_+\|two-component-system-response-regulator-OmpR	unknown	unknown	gnl\|CDD\|181883
NC_020209.1\|WP_015373496.1\|5036756_5037515_-\|hypothetical-protein	unknown	unknown	unknown
NC_020209.1\|WP_003236044.1\|5041589_5042516_+\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|200082
NC_020209.1\|WP_015373495.1\|5035312_5036554_-\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924
NC_020209.1\|WP_003236072.1\|5023043_5024114_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NC_020209.1\|WP_015373494.1\|5034116_5035310_-\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924
NC_020209.1\|WP_167325133.1\|5042930_5044892_+\|choline-BCCT-transporter-BetT	unknown	unknown	gnl\|CDD\|236635
NC_020209.1\|WP_003236041.1\|5045002_5046040_+\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
NC_020209.1\|WP_003236069.1\|5027320_5027947_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_020209.1\|WP_003236039.1\|5046108_5047692_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NC_020209.1\|WP_003236048.1\|5039475_5040270_-\|cystine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|183061
NC_020209.1\|WP_015373493.1\|5032764_5034117_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NC_020209.1\|WP_003236052.1\|5038060_5038807_-\|L-cystine-ABC-transporter-ATP-binding-protein-YecC	unknown	unknown	gnl\|CDD\|183063
NC_020209.1\|WP_015373490.1\|5024110_5027164_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NC_020209.1\|WP_003236050.1\|5038810_5039476_-\|cystine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|185055

Protein	Function_ID	Function_description	E-value
NC_020209.1\|WP_015373497.1\|5040427_5041423_-\|D-cysteine-desulfhydrase	gnl\|CDD\|179673	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated.	0
NC_020209.1\|WP_003236065.1\|5030119_5030764_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.71827e-100
NC_020209.1\|WP_015373499.1\|5047983_5050320_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NC_020209.1\|WP_015373492.1\|5031865_5032681_-\|amino-acid-ABC-transporter-exported-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	1.81825e-84
NC_020209.1\|WP_003236048.1\|5039475_5040270_-\|cystine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|183061	PRK11260, PRK11260, cystine ABC transporter substrate-binding protein.	1.1068e-165
NC_020209.1\|WP_015373500.1\|5050675_5051416_+\|two-component-system-response-regulator-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	2.43558e-168
NC_020209.1\|WP_003236044.1\|5041589_5042516_+\|serine-acetyltransferase	gnl\|CDD\|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	2.95256e-56
NC_020209.1\|WP_015373495.1\|5035312_5036554_-\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0
NC_020209.1\|WP_003236072.1\|5023043_5024114_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	9.84419e-62
NC_020209.1\|WP_015373494.1\|5034116_5035310_-\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0
NC_020209.1\|WP_167325133.1\|5042930_5044892_+\|choline-BCCT-transporter-BetT	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NC_020209.1\|WP_003236041.1\|5045002_5046040_+\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
NC_020209.1\|WP_003236069.1\|5027320_5027947_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.56522e-20
NC_020209.1\|WP_003236039.1\|5046108_5047692_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NC_020209.1\|WP_015373493.1\|5032764_5034117_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NC_020209.1\|WP_003236052.1\|5038060_5038807_-\|L-cystine-ABC-transporter-ATP-binding-protein-YecC	gnl\|CDD\|183063	PRK11264, PRK11264, putative amino-acid ABC transporter ATP-binding protein YecC; Provisional.	3.05038e-176
NC_020209.1\|WP_015373490.1\|5024110_5027164_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NC_020209.1\|WP_003236050.1\|5038810_5039476_-\|cystine-ABC-transporter-permease	gnl\|CDD\|185055	PRK15100, PRK15100, cystine ABC transporter permease.	1.04518e-146

>NC_020209.1|WP_015373496.1|5036756_5037515_-|hypothetical-protein
MTRTATPAMLTAPTLPQALRNGINAHAAAQLQVDIAPYPGMEEGDLIELFWNNCFAASRRITACRIGQPTRLRIPQSFVLDGPAHVHYQVMQIGHGPARSATTQVRVKTDCPGGQPPAVYSDENQNLAPVGLPETIRRQGVNSRQVHRGVPLTIEPYPNMSSGDAITLRWGDVRIDLPKVTAKGVGLAVQVWVPSSVIIEGGDDCRLEVTYCVLDRVGNNSRWAPTRTLRIAPLLPTRPATATPVYQPRPLG
>NC_020209.1|WP_015373495.1|5035312_5036554_-|SfnB-family-sulfur-acquisition-oxidoreductase
MSNLAATPPQSDLDEAPLLLPAAVLRNDAEALSAAHTLAQAVRQHAAKRDQQRQLPWAQLEQFTRSGLGSISIPREYGGPQVSFVTLAEVFTIISAADPALGQIPQNHFGILHLVQGTATPPQKKQLFQSVLDGWRIGNGGPERGTQNTLELKARITAKGNGYVVSGQKFYSTGALFAHWVAIKALNDDGKQVLAFVRRGSEGLRIIDDWSGFGQRTTASGTVLLDEVAVDAELVIDNWRIGESPNIQGAVSQLIQAAIDAGIAQGALDDTIAFVRERSRPWIDAKVERASDDLYVIADIGKLKIELHAAQALLRKAGRVLDEVSAAPITAQSAACASIAVAEAKVLTTEVALLVSEKLFELAGSRATLAEFNLDRHWRNARVHTLHDPVRWKYHAIGAYRLNGTLPARHSWI
>NC_020209.1|WP_015373494.1|5034116_5035310_-|SfnB-family-sulfur-acquisition-oxidoreductase
MTLSHHVAVITSDEQALIVANDLAEDFRRDSAQRDRERRLPLPELDAFSRSGLWGISVPREYGGAGVSNVTLAKVIALIAQADASLGQIPQNHFYALQVLRVNGSPEQQQRLYAEVLAGQRFGNALAELGTKTAHDRVTRLTRDGDGFRITGRKFYATGALYAQRIPTSVVDEHGVQQLAFVPRDSQGLSVIDDWSGFGQRTTGSGSVVFDNVWVAARDVIPFQSAFERPTTVGPLAQILHAAIDTGIARAAFEDALHFVRTKTRPWIDAGNDKASEDPLTLKSFGHLSIRLHAAEALLERAGECLDRAQADSNAETVAAASIAVAEARALSTEISLAAGSTLFELAGSQATLAEHGLDRHWRNARVHTLHDPVRWKYHAVGNYYLNDENPPLRGTL
>NC_020209.1|WP_015373493.1|5032764_5034117_-|LLM-class-flavin-dependent-oxidoreductase
MAKKKILLNAFNMNCIGHINHGLWTHPRDTSTHYKTIEYWTDLAKTLERGLFDGLFIADIVGVYDVYQHSIDVPLKESIQLPVNDPLLLVSAMAAVTRNLGFGLTANLTYEPPYLFARRMSTLDHLSRGRVGWNIVTGYLDSAAKAMGLTEQVEHDRRYDQADEYLQVLYKLWEGSWEDDAVLNDPAQRIYAQPGKVHKVEHHGEFYQVEGYHLCEPSPQRTPVLFQAGSSDRGLLFAGRHAECVFISGQTRAATKAQVDKVRASAVQAGRNAHDIKVFMGLNVIVGATEELAWAKHAEYLSYASAEAGVAHFAASTAIDFAEYELDEPIQYVKSNAIQSASKTLQNNDWTRRKLLEQHALGGRYITLVGSPEQVADELELWISETGLDGFNLTRIVTPESYVDFIDLVVPELQRRGSYKTEYEAGTLREKVFHAGSRLPKQHTGSTYRH
>NC_020209.1|WP_015373492.1|5031865_5032681_-|amino-acid-ABC-transporter-exported-protein
MKKTLRSHPVKALALAFGLISSTVFAADTPLKVGTTAAFAIPLEAAVAEAGKQGLNVELVEFTDWIAPNVSLAAGDIDVNYFQHILFLENAKAAAGFDLVPYAPGIINNVGLYSKKYKTIAELPQGASVAIANDPINSGRGLQLLAKAGLITLKPGVGYKATEEDIVSNPKKLKILQVEAVQLVRAYDDADLVQGYPAYIRLSKTFDAESALLFDGLDHPEYVIQFVIQPKSKTDPRVIKLVDIYQHSPVVRAALDKSLGTLYQVGWEGKQ
>NC_020209.1|WP_003236065.1|5030119_5030764_-|ABC-transporter-permease
MWFDRLVQGAIDTLLMVGVSSLIALLVGIPLAVFLVTSDKGGIYQAPALNRVLGAFVNLFRSIPFLILMVALIPFTRLIVGTTYGVWAAVVPLTIAATPFFARIAEVSLREVDHGLIEAAQAMGCRRWHIIRHVLLPEALPGIVGGFTITLVTMINSSAMAGAIGAGGLGDIAYRYGYQRFDTQIMLTVIVLLVVLVTVIQLGGDRLARVLDKR
>NC_020209.1|WP_015373491.1|5028071_5029970_-|hypothetical-protein
MTTPTQLLPTPPYSVYPAIPLTATPYPETSDWGLGRRETDPNALFTFENWQASVQNDSFAIYWGTSPIPVAQDIVKNIANRYNLTIPGTKIPEGESQVVGEVTRAASGQLEASFPELYLVKTQRPGGLTFWASEHYHRGLHLTVDGLPDGSIINQANTQVGLWCLIKPYENIRKNDTITVAYGASTIDHIVSPAEAAGTAPIRIFISPQVIKQGNQFGPVGVAFMVRDVVNNVSGETYAYSKPYILESELDVTLLRPPAFMLDGAVKSTVDLDQPSAQRYEAQVTLPVDPLAPIPPNQIVLVVTVTQKTQPGTSSRTVRLPAVTDKNQGSEILTIPTDLIASMTDGTLRMFVEWQAADGTLLNRSGSTVVRVVGTAALVLPAPAFENKPGPRTIAPENYPNGAVVAVKYQGMNSTHVISLNWTFANGSSAAIPVQTGNASGTVLFNISPQLISQSMGQVVNLSYEVTTSIKTSVSGNQQLKVQGKELVNDTSTFADGSYAGWERGPAGADPRNLKFVNDNGKLILFNNTFTNKSAGVLLKKRFTNLRVGTTYVFSVQVSRWSEDFAYPIGFLQTSQGEKTTPLTITTDYPYFQSMSLSFVAQGTDIDLMYVSAQDSGVGNDYVLRNFVVERT
>NC_020209.1|WP_003236069.1|5027320_5027947_-|class-I-SAM-dependent-methyltransferase
MKLAPDDLDQITSTTLGHYNQVAEDFREGTRDHDVSQNIEALLRHIQGNAPFTLLDFGCGPGRDLQTFTRMGHVAVGLDGSERFAQMAREDSGCEVYQQDFLKLELPAARFDGIFANAVLFHIPKQELPRVLTQLHGALKPGGVLFSSNPRGNNREGWNGPRYGSYHDLQAWQSLLTTAGFVELEHYYRPAGLPRDQQPWLASVWRKA
>NC_020209.1|WP_015373490.1|5024110_5027164_+|efflux-RND-transporter-permease-subunit
MKRSFNLSDWALKHQSFVWYLMFVALLMGVFSYMNLGREEDPSFTIKTMVIQTRWPGATQEETLKQVTDRIEKKLEELDALDYVKSYTRPGESTVFVFLKDTTSAKDIPDTWYQVRKKIDDIRGSFPQGLQGPSFNDEFGDVFGSVYAFTGDGLSMRQLRDYVEQVRAEIRAVPGLGKVEMIGQQDEVIYLNFSTRKLAALGVDQRQVVQSLQSQNAVTPAGVIEAGPERISVRTSGQFASEKDLANVNLRLNDRFYRLADIAEISRGYVDPARPMFRFNGKPAIGLAIAMQKGGNIQSFGKALHTRMDELTADLPVGVGVHKVSDQAEVVEEAVGGFTSALFEAVIIVLVVSFISLGMRAGLVVACSIPLVLALVFVFMEYSGITMQRVSLGALIIALGLLVDDAMITVEMMITRLEKGETKEQAATYAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVAMLVSWVVAVLFAPVIGVHILSANVKPHNGEPGRIGRAFNGGMLWAMRNRWWAIGITVALFVASVFSMQFVQNQFFPSSDRPEVLVDLNLPQNASINETRKAVDRLEAIIKDDPDIERWSTYIGQGAIRFYLPLDQQLENPYYAQLVIVSKGLEERGALIARLQKRLRDDFVGIGSYVQPLEMGPPVGRPIQYRVSGQDIDQVRKHAIELATLLDQNDHLGEMIYDWNEPGKVLRIDIAQDKARQLGLSSEDVAQLMNSVVSGASVTQVHDDIYLINVVGRAEDAERGTPETLQNLQIVTPNGTSIPLLAFATVRYELEQPLVWRRDRKPTITVKASVRDEIQPTDLVKQLKPEIDTFSAGLPVGYKVATGGTVEESGKAQGPIARVVPLMLFLMATFLMIQLHSVQKMFLVASVAPLGLIGVVLALIPTGTPMGFVAILGILALIGIIIRNSVILVTQIHEYEVAGYTPWDAVVEATEHRRRPILLTAAAASLGMIPIAREVFWGPMAYAMIGGIIIATLLTLLFLPALYVAWYKIREPRQDQT
>NC_020209.1|WP_003236072.1|5023043_5024114_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKRLTVLLAAGLLLAACSKEEAPPEPVRPVLSMQVKAQDQETLGRFAGTIQARYESNLGFRVPGRIARRAVDVGAEVEKGALLAVLDPTDQQNQLRAAQGDLARVQAQYINAQANARRQQELFNRGVGAQAQLDVAQTDLKTTRATLEQAQSSVNQARDQLNYAELRTDHAGIVTAWNAEAGQVVTAGQQVVTLARPDVKEAVIDLPAGLAERLPADVVFIVAGQLDPNVNTTAIVREIEPQAQSATRTRRARLTLAETPPAFRLGTAISVTLSSAIAPRIELPLSALQEVDGATRIWLLDTQSQTVQPRDVTVLSRDSDSALLKGGVKPGERIVIAGVNSLKPGQKVKIDKDSPR
>NC_020209.1|WP_003236052.1|5038060_5038807_-|L-cystine-ABC-transporter-ATP-binding-protein-YecC
MIVVEKLTKQFNAQVVLNGIDLEVKAGEVVAIIGPSGSGKTTFLRCLNFLEEPTSGRIKVGDVEIDGSKPLNQQQGLVRRLRQHVGFVFQNFNLFPHRTALENVIEGPIVVKKMPREAATELGRTLLAKVGLAGKEDAYPRRLSGGQQQRVAIARALAMEPEVILFDEPTSALDPELVGEVLATIRSLAEENRTLVIVTHEMSFARDVANRVIFFDKGVIVEQGEAKALFANPREERTRQFLSKFLAH
>NC_020209.1|WP_003236050.1|5038810_5039476_-|cystine-ABC-transporter-permease
MEAGFQLALDSAPFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLLSWTARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAALIYWILASILAHFQNRLEDRVNRHDLES
>NC_020209.1|WP_003236048.1|5039475_5040270_-|cystine-ABC-transporter-substrate-binding-protein
MTISALRRTLLVGTLGLALGAGLLGQAVAGEQLGNIKKAGEIKIGLEGTYPPFSFVDESGKLTGFEVELSEALAKELGVKVKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPYTISGIQALVLKKNAGEIKTAADLAGKKVGVGLGTNYEQWLKDNQPKAIIKTYNDDPTKFQDLRIGRIDAILIDRLAALEYAKKAPDTAAAGDAFSRQESGIALRKGEPELLEAVNTALDKLRADGTLKKLSEKYFNADVTQ
>NC_020209.1|WP_015373497.1|5040427_5041423_-|D-cysteine-desulfhydrase
MIKQQLDRFNRLDLLGGATALEKLERLSTWLGRDVYVKRDDTTPLAMGGNKLRKLEYLAADAIAQGADTLVTAGAIQSNHVRQTAALAAKLGLGCVALLENPTGTEDPNYLGNGNRLLLELFDAKVELVENLDNVDDQLNALADRLRSNGKKPYLVPIGGSNALGALGYVRAGLELAAQIDASGIDFAAVVLASGSAGTHSGLALALSEALPDLPVVGVTVSRSDETQRPKVQGLAERTAELLGVALPDAFKVILWDEYFGPRYGEPNAGTLSAIKLLASQESLLLDPVYTGKAMAGLLDGIGRQRFEDGPIIFLHTGGAPALFAYDCVFN
>NC_020209.1|WP_003236044.1|5041589_5042516_+|serine-acetyltransferase
MSERSSHWQLQTIVSQLRSARDQWRTRNGRLSGEHGGRELPSREAVAQILEALCGALFPMRLGPVDLREESEDFYVGHTLDVALNALLAQARLELRYAARQGGQDDSQIDARAIRLIQDFALALPSLRSLLDTDVLAAYHGDPAARSVDEVLLCYPGILAVIHHRLAHHLYRAGLPLLARISAEIAHSATGIDIHPGAQIGPSFFIDHGTGVVIGETAIIGERVRIYQAVTLGAKRFPADEDGQLQKGHPRHPIVEDDVVIYAGATILGRITIGKGSTIGGNVWLTRSVPAGVNITQANLQHEDGAQK
>NC_020209.1|WP_167325133.1|5042930_5044892_+|choline-BCCT-transporter-BetT
MNAPVFYFAATFILLFGITVIAIPQQAGAWLLAAQNWAANTVGWYYMLAMTLYLVFVVVTALSGYGKIKLGADHDEPEFSYLSWAGMLFAAGISITLFFFCVSEPLTHLVQPPQGAPMNADAARQAMQILFLHWGLHGWGVFAFVGMALAYFAYRHNLPLALRSALYPLIGKRINGPIGYVVDGFGIIATVFGLGADMGFGVLHLNSGLDYLFGIAHTQWVQVGLITLMMGAAILVAVAGVDKGVRVMSDINMLLACALLLFVLFAGPTQHLLNTLIQNIGDYLGALPTKSFDVYAYDKPSDWLGGWTVFYWAWWIAWSPFVGLFIARISRGRTIREFVFGVLLIPLGFTLAWMSIFGNSAIDQVLNHGMAALGQSAIDDPSMSLYLLLETYPWSKTVIAVTVFISFVFFVTSADSGTVVLSTLSSKGGNADEDGPKWLRVFWGAMTALVTSALLFAGSIDSLKSAVVLTSLPFSMILLLMMWGLHKAFHLESQKQIAQLHSLAPVSASRRGKGGWRQRLSQAVHFPSRDEVYRFLESTVRPAIEEVTAVFVEKGLSVVTQPDPANDSVSLEIGHGEEHPFIYQVQMRGYFTPSFARGGMGSKQINNRRYYRAEVHLSEGSQDYDLVGYTKEQIINDILDQYERHLQFLHLVR
>NC_020209.1|WP_003236041.1|5045002_5046040_+|L-glyceraldehyde-3-phosphate-reductase
MTYIAAENRYESIPYRRTGRSGLVLPALSLGLWHNFGDSTPIATQRALLRTAFDLGINHFDLANNYGPPYGSAEINFGRLLREDFKHYRDELIISSKAGWDMWPGPYGQGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDADTPLEETASALATAVQQGKALYIGISSYSGVKTREMAALLNEWKVPLLIHQPAYNLLNRWVEKDLLDTTDELGVGVIAFTPLAQGLLTDKYLNGVPADARVNRPGGGSLQAGHLSEANLAHVRALNEIAQRRGQSLAQLALAWTLRDPRVTSALIGASRPEQIIENVGALKNLSFSKEELAQIDRFAQEGGINLWEKPSSAE
>NC_020209.1|WP_003236039.1|5046108_5047692_-|glutamate--cysteine-ligase
MSELLNRRLALLGKREHLSLLEQCLHGIERECLRVTGEGRLAQTPHPEALGAALTNEMITTDYSESLLEFITPALPNPADTLSSLDRIHRFAYTKLGSEYLWSPSMPCPLPAEEDIPIAYYGTSNIGQLKYVYRKGLALRYGKTMQCIAGIHYNFSLPEQLWPLLKDTEGFVGTERDYQSTAYIALIRNFRRYSWLLMYLFGASPALDAGFLRGRSHQLEVLDADTLYLPYATSLRMSDLGYQSNAQAGLTPCYNDLASYTDSLRQAVATPYAPYVEVGTHKDGEWVQLNTNILQIENEYYSNIRPKRVTYTGERPIQALVARGIQYIEVRCLDINPFLPMGIDLPESRFLDAFLLYCALNDSPLFANNECGNASANFLSVVKEGRRPGLELQRDGAAVDMKQWATELLEQIAPLAALLDESHGISEHSQALDAQLAKIQDPSLTPSAQVLAAMAERKESFAQFSLHQSQLHAEYFRNDPLTTDEQAHFEELARKSLAQQAELEQTEVGDFDVFVGSYQASILAISN
>NC_020209.1|WP_015373499.1|5047983_5050320_-|RNA-binding-transcriptional-accessory-protein
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRYLRELDERRISILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGDLADGLFNDPLLSPEAEAARFIDADKGVADVKAALEGAKYILMERFAENANLLEKLRNYLKQEAVLSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVGDELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAETEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHNKWDQTLAILAALCAKHSVDLIAIGNGTASRETDKLAAELIKKYPAMKMTKVMVSEAGASVYSASELASREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVTHRDQNGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDAAFLKRLDPKKYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKVDGARGARPGSAPRQSQNRSENSQPRKETATAAPANNAMASLFANAKQLKKR
>NC_020209.1|WP_015373500.1|5050675_5051416_+|two-component-system-response-regulator-OmpR
MSSTAQTAEGEKILIVDDDPGLSSLLERFFNSKGYRARAVPNTEQMDRLLGREVFNLVVLDLMLPGEDGLTACKRLRGANNQIPIIMLTAKGDELSRIKGLELGADDYLAKPFNPDELMARVKAVLRRQAPPVPGAPGSEDESVTFGDYELSLATRELKRGDEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREWDALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGTATK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2417290-2417314	0	1.0
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	338414-338438	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	787642-787666	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1036770-1036794	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1332916-1332940	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1378384-1378408	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1449019-1449043	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1456835-1456859	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1808782-1808806	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2393797-2393821	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2478413-2478437	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2549330-2549354	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2848681-2848705	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3737734-3737758	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4527202-4527226	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	5016680-5016704	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	657178-657202	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1416934-1416958	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1444175-1444199	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1618392-1618416	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1618729-1618753	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1794142-1794166	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1828780-1828804	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2165499-2165523	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2327165-2327189	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2754216-2754240	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2830586-2830610	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2842873-2842897	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3268351-3268375	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3748920-3748944	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4713259-4713283	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4848683-4848707	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4941461-4941485	1	0.96
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	5446443-5446467	1	0.96
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	1224007-1224039	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2478240-2478272	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2607612-2607644	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2861355-2861387	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	4604519-4604551	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	5027254-5027286	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	1797177-1797209	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2254402-2254434	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2357931-2357963	1	0.97
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2872289-2872321	1	0.97
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	338241-338273	1	0.97
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1363086-1363110	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1931300-1931324	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2105018-2105042	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2119656-2119680	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2500371-2500395	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2607785-2607809	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2861528-2861552	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2910646-2910670	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3916461-3916485	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3922025-3922049	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3972060-3972084	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4316305-4316329	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4922837-4922861	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	5014196-5014220	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	5159004-5159028	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	175974-175998	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	542732-542756	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	569104-569128	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	581051-581075	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1168273-1168297	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1576586-1576610	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	1797012-1797036	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	2872124-2872148	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3358288-3358312	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	3788309-3788333	2	0.92
NC_020209_1	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	NC_020209.1	4236643-4236667	2	0.92
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	338241-338273	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	983088-983120	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	1529803-1529835	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2104844-2104876	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	581216-581248	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	2867825-2867857	2	0.939
NC_020209_2	2.1\|2086248\|33\|NC_020209\|CRISPRCasFinder	2086248-2086280	33	NC_020209.1	3749085-3749117	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	1224007-1224039	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2478240-2478272	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2607612-2607644	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2861355-2861387	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	4604519-4604551	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	5027254-5027286	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	1797177-1797209	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2254402-2254434	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2357931-2357963	2	0.939
NC_020209_3	3.1\|5037820\|33\|NC_020209\|CRISPRCasFinder	5037820-5037852	33	NC_020209.1	2872289-2872321	2	0.939

1. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2417290-2417314, mismatch: 0, identity: 1.0

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagtgcagatt	Protospacer
*************************

2. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 338414-338438, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

3. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 787642-787666, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

4. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1036770-1036794, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

5. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1332916-1332940, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

6. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1378384-1378408, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

7. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1449019-1449043, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

8. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1456835-1456859, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

9. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1808782-1808806, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

10. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2393797-2393821, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

11. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2478413-2478437, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

12. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2549330-2549354, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

13. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2848681-2848705, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

14. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3737734-3737758, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

15. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4527202-4527226, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

16. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 5016680-5016704, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

17. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 657178-657202, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

18. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1416934-1416958, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

19. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1444175-1444199, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

20. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1618392-1618416, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

21. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1618729-1618753, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

22. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1794142-1794166, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

23. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1828780-1828804, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

24. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2165499-2165523, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

25. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2327165-2327189, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

26. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2754216-2754240, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

27. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2830586-2830610, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

28. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2842873-2842897, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

29. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3268351-3268375, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

30. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3748920-3748944, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

31. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4713259-4713283, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

32. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4848683-4848707, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

33. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4941461-4941485, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

34. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 5446443-5446467, mismatch: 1, identity: 0.96

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

35. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 1224007-1224039, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

36. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2478240-2478272, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

37. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2607612-2607644, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

38. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2861355-2861387, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

39. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 4604519-4604551, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

40. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 5027254-5027286, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

41. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 1797177-1797209, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

42. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2254402-2254434, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

43. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2357931-2357963, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

44. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2872289-2872321, mismatch: 1, identity: 0.97

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactgaacggcatt	Protospacer
*************.*******************

45. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 338241-338273, mismatch: 1, identity: 0.97

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggttt	Protospacer
***** ***************************

46. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1363086-1363110, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgctcagttaagcgcagatt	Protospacer
*******.*********.*******

47. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1931300-1931324, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccattcagttaagcgcagatt	Protospacer
******.**********.*******

48. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2105018-2105042, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaaacgcagatt	Protospacer
****************..*******

49. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2119656-2119680, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgcggttgagttaagtgcagatt	Protospacer
***** *** ***************

50. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2500371-2500395, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgcctttcagttaagcgcagatt	Protospacer
****** **********.*******

51. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2607785-2607809, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagctt	Protospacer
*****************.**** **

52. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2861528-2861552, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttgagcgcagatt	Protospacer
**************.**.*******

53. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2910646-2910670, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagtcaagcgcagatt	Protospacer
*************.***.*******

54. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3916461-3916485, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aacgccgttcagttaagcgcagatt	Protospacer
**.**************.*******

55. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3922025-3922049, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aataccgttcagttaagcgcagatt	Protospacer
***.*************.*******

56. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3972060-3972084, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatggcgttcagttaagcgcagatt	Protospacer
**** ************.*******

57. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4316305-4316329, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaaacgcagatt	Protospacer
****************..*******

58. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4922837-4922861, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttacgcgcagatt	Protospacer
*************** *.*******

59. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 5014196-5014220, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccattcagttaagcgcagatt	Protospacer
******.**********.*******

60. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 5159004-5159028, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccattcagttaagcgcagatt	Protospacer
******.**********.*******

61. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 175974-175998, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgctcagttaagcgcagatt	Protospacer
*******.*********.*******

62. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 542732-542756, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagtcaagcgcagatt	Protospacer
*************.***.*******

63. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 569104-569128, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgtccagttaagcgcagatt	Protospacer
********.********.*******

64. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 581051-581075, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagtcaagcgcagatt	Protospacer
*************.***.*******

65. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1168273-1168297, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgcccttcagttaagcgcagatt	Protospacer
****** **********.*******

66. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1576586-1576610, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aacgccgttcagttaagcgcagatt	Protospacer
**.**************.*******

67. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 1797012-1797036, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aacgccgttcagttaagcgcagatt	Protospacer
**.**************.*******

68. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 2872124-2872148, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcacttaagcgcagatt	Protospacer
*********** *****.*******

69. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3358288-3358312, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagtcaagcgcagatt	Protospacer
*************.***.*******

70. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 3788309-3788333, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagctaagcgcagatt	Protospacer
************.****.*******

71. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to position: 4236643-4236667, mismatch: 2, identity: 0.92

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttgagttaagcgcagatt	Protospacer
********* *******.*******

72. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 338241-338273, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aaacccacacattttccttaactgaacggcatt	Protospacer
**.**********.*******************

73. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 983088-983120, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccatacattttccttaactgaacggcatt	Protospacer
*******.*****.*******************

74. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 1529803-1529835, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacatgttccttaactgaacggcatt	Protospacer
************ .*******************

75. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2104844-2104876, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcctacacattttccttaactgaacggcatt	Protospacer
*****.*******.*******************

76. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 581216-581248, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttaactggacggcatt	Protospacer
*************.**********.********

77. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 2867825-2867857, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttccttagctgaacggcatt	Protospacer
*************.******.************

78. spacer 2.1|2086248|33|NC_020209|CRISPRCasFinder matches to position: 3749085-3749117, mismatch: 2, identity: 0.939

aagcccacacattctccttaactgaacggcatt	CRISPR spacer
aagcccacacattttcctgaactgaacggcatt	Protospacer
*************.**** **************

79. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 1224007-1224039, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

80. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2478240-2478272, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

81. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2607612-2607644, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

82. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2861355-2861387, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

83. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 4604519-4604551, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

84. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 5027254-5027286, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

85. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 1797177-1797209, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

86. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2254402-2254434, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

87. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2357931-2357963, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

88. spacer 3.1|5037820|33|NC_020209|CRISPRCasFinder matches to position: 2872289-2872321, mismatch: 2, identity: 0.939

aatgcggttcagttaaggaaaatgtgtgggttt	CRISPR spacer
aatgccgttcagttaaggaaaatgtgtgggctt	Protospacer
***** ************************.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

578294 : 657128

uncultured_Caudovirales_phage(25.0%)

tail,tRNA,plate,lysis,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015371349.1\|578294_578765_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_003231431.1\|578812_579862_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-23	32.4
WP_003231428.1\|579858_580779_-	ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	2.5e-19	28.0
WP_015371350.1\|581424_583533_+	molybdopterin oxidoreductase family protein	NA	NA	NA	NA
WP_003231422.1\|583619_583958_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_003231421.1\|584026_584497_-	bacterioferritin	NA	NA	NA	NA
WP_003231420.1\|584698_584917_-	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
WP_003231418.1\|585160_585763_+	peroxiredoxin	NA	NA	NA	NA
WP_003231417.1\|585836_586508_-	ribonuclease T	NA	NA	NA	NA
WP_003231414.1\|586504_587551_-	dihydroorotase	NA	NA	NA	NA
WP_003231412.1\|587707_588616_+	OmpA family protein	NA	NA	NA	NA
WP_003231410.1\|588745_589963_+	argininosuccinate synthase	NA	NA	NA	NA
WP_003231407.1\|590569_591202_+	response regulator transcription factor	NA	NA	NA	NA
WP_003231405.1\|591276_591459_-	hypothetical protein	NA	NA	NA	NA
WP_003231403.1\|591566_592205_-	endonuclease III	NA	NA	NA	NA
WP_015371351.1\|592228_593011_-	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_015371352.1\|593052_595104_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_015371353.1\|595275_596370_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_015371354.1\|596840_597164_-	ferredoxin family protein	NA	NA	NA	NA
WP_015371355.1\|597306_599898_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.5e-29	21.5
WP_003231391.1\|600076_600661_-	ABATE domain-containing protein	NA	NA	NA	NA
WP_015371356.1\|600753_601695_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003231387.1\|601959_602694_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	4.8e-119	86.9
WP_003231384.1\|603283_603622_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	2.8e-45	80.9
WP_015371358.1\|603644_604160_+	hypothetical protein	NA	NA	NA	NA
WP_015371359.1\|604163_604775_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	2.7e-46	54.0
WP_015371360.1\|604784_605117_+	hypothetical protein	A0A2H4JI46	uncultured_Caudovirales_phage	6.1e-37	69.1
WP_015371361.1\|605113_606109_+\|plate	baseplate J/gp47 family protein	A0A2H4JC04	uncultured_Caudovirales_phage	4.6e-112	63.5
WP_015371362.1\|606105_606744_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	1.1e-37	52.6
WP_015371363.1\|606740_607271_+	hypothetical protein	B0ZSG1	Halomonas_phage	2.5e-48	56.2
WP_081602870.1\|607323_608076_+	hypothetical protein	NA	NA	NA	NA
WP_041931425.1\|608085_608322_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_015371364.1\|608408_608582_+	hypothetical protein	NA	NA	NA	NA
WP_003231370.1\|608584_609751_+\|tail	phage tail sheath protein	B0ZSG8	Halomonas_phage	1.2e-124	57.0
WP_003231369.1\|609750_610257_+\|tail	phage major tail tube protein	Q6R4W3	Vibrio_virus	1.4e-21	33.9
WP_015371365.1\|610438_611011_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	1.2e-29	39.8
WP_015371367.1\|611138_612929_+	hypothetical protein	NA	NA	NA	NA
WP_003231366.1\|612928_613312_+\|tail	phage tail protein	B0ZSH2	Halomonas_phage	1.3e-35	58.3
WP_003231365.1\|613304_613517_+\|tail	tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	1.1e-18	62.9
WP_015371368.1\|613526_614537_+\|tail	phage-like tail protein	A0A2H4JH05	uncultured_Caudovirales_phage	7.7e-99	54.7
WP_015371369.1\|614558_615116_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	5.0e-76	75.4
WP_041931426.1\|615103_615604_+\|lysis	lysis protein	A0A2H4IZW4	uncultured_Caudovirales_phage	2.4e-29	49.7
WP_015371371.1\|615685_616186_+	CinA family protein	B5TK85	Pseudomonas_phage	2.2e-70	81.9
WP_003231359.1\|616269_617328_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.4e-111	62.7
WP_015371372.1\|617336_617804_+	recombination regulator RecX	NA	NA	NA	NA
WP_003231355.1\|617928_619041_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_015371373.1\|619248_619689_-	hypothetical protein	NA	NA	NA	NA
WP_041931427.1\|619868_620594_+	DTW domain-containing protein	NA	NA	NA	NA
WP_003231349.1\|620712_621363_+	response regulator transcription factor	NA	NA	NA	NA
WP_003231347.1\|621438_621801_+	diacylglycerol kinase	NA	NA	NA	NA
WP_003231346.1\|621804_622731_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003231344.1\|622856_623636_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_003231341.1\|623771_624467_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_003231339.1\|624470_624932_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.6e-38	51.3
WP_003231338.1\|625002_625713_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_015371375.1\|625780_626269_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003231334.1\|626373_627714_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_003231332.1\|628003_629905_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	5.5e-74	33.3
WP_003231330.1\|630029_631136_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_015371376.1\|631407_631593_+	hypothetical protein	NA	NA	NA	NA
WP_003231325.1\|631729_633355_-	glucan biosynthesis protein D	NA	NA	NA	NA
WP_015371377.1\|633691_634399_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_015371378.1\|634755_636378_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_015371379.1\|636377_636890_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_015371380.1\|636886_638158_+	chemotaxis protein CheR	NA	NA	NA	NA
WP_015371381.1\|638154_638856_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_015371382.1\|638852_641132_+	hybrid sensor histidine kinase/response regulator	Q56AR1	Bacillus_thuringiensis_phage	9.7e-09	27.4
WP_003231317.1\|641128_642139_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_003231316.1\|642190_643192_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.2e-16	35.2
WP_122457926.1\|643486_644581_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.0e-07	46.6
WP_015371384.1\|644680_646183_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	3.6e-84	39.4
WP_080627506.1\|646290_647007_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_015371385.1\|647135_647684_+	lipoprotein	NA	NA	NA	NA
WP_015371386.1\|647705_648983_+	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA
WP_015371387.1\|649035_649941_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	6.0e-10	30.7
WP_015371388.1\|649937_650264_+	hypothetical protein	NA	NA	NA	NA
WP_141687595.1\|650400_650679_+	hypothetical protein	NA	NA	NA	NA
WP_003231302.1\|650728_651514_-	OmpA family protein	NA	NA	NA	NA
WP_003231300.1\|651569_651995_-	DUF4398 domain-containing protein	NA	NA	NA	NA
WP_003231297.1\|652265_652613_-	hypothetical protein	NA	NA	NA	NA
WP_015371390.1\|652801_655429_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_003231293.1\|655709_656357_+	adenylate kinase	A0A2K9L833	Tupanvirus	1.9e-10	32.5
WP_015371391.1\|656444_657128_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA

DBSCAN-SWA_2

715475 : 723928

Synechococcus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015371416.1\|715475_716588_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.9e-34	29.8
WP_015371417.1\|716596_717442_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_003231192.1\|717496_717970_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_015371418.1\|717966_719025_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_003231188.1\|719012_719762_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	8.6e-63	49.8
WP_032869892.1\|719761_720439_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.0e-43	52.5
WP_032869946.1\|720612_721449_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
WP_003231183.1\|721554_722559_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
WP_002554837.1\|722762_722972_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_003231181.1\|723361_723928_+	dCTP deaminase	S5VM63	Pseudomonas_phage	1.6e-74	73.3

DBSCAN-SWA_3

2579325 : 2587342

uncultured_Caudovirales_phage(71.43%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015372398.1\|2579325_2580150_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.3e-104	71.2
WP_003232136.1\|2580327_2580822_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_015372399.1\|2580995_2581388_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.9e-58	86.2
WP_015372400.1\|2581389_2581740_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	2.6e-38	67.5
WP_003232130.1\|2581739_2582018_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	2.0e-25	58.6
WP_003232128.1\|2582014_2582350_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	9.4e-46	78.4
WP_015372401.1\|2582346_2583348_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	4.7e-165	85.4
WP_015372402.1\|2583436_2584432_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003232124.1\|2584666_2586061_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003232123.1\|2586061_2587342_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.1e-97	53.0

DBSCAN-SWA_4

2653203 : 2717977

Escherichia_phage(27.27%)

protease,tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015372430.1\|2653203_2654586_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.9e-44	32.8
WP_015372431.1\|2654604_2656305_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	6.0e-205	61.7
WP_003174772.1\|2656565_2657069_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	3.3e-10	32.7
WP_003232019.1\|2657065_2657815_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_003232018.1\|2657951_2659481_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_015372432.1\|2659480_2660683_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_015372433.1\|2660698_2662150_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_003232012.1\|2662146_2662620_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_041931497.1\|2662855_2666542_-	translocation/assembly module TamB	NA	NA	NA	NA
WP_015372435.1\|2666538_2668266_-	outer membrane protein assembly factor	NA	NA	NA	NA
WP_003232006.1\|2668330_2668981_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003232004.1\|2669149_2669962_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_041931498.1\|2670250_2671582_+	phosphate ABC transporter substrate-binding/OmpA family protein	NA	NA	NA	NA
WP_003238360.1\|2671704_2672934_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_003238359.1\|2673085_2674021_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003238358.1\|2674113_2674506_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_015372437.1\|2674522_2675422_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	2.8e-44	37.7
WP_015372438.1\|2675963_2677598_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.1e-30	29.7
WP_003238352.1\|2677748_2678912_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA
WP_015372439.1\|2678923_2680531_+	biotin-dependent carboxyl transferase	A0A1B2ITV7	Pike_perch_iridovirus	5.6e-19	56.5
WP_003238348.1\|2680547_2681354_+	gamma-carboxygeranoyl-CoA hydratase	NA	NA	NA	NA
WP_015372440.1\|2681350_2683279_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
WP_041931499.1\|2683275_2683911_-	helix-turn-helix domain-containing protein	A0A0N7BTS4	Escherichia_phage	3.4e-28	37.9
WP_003238342.1\|2684041_2684395_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_015372443.1\|2684547_2684880_-	hypothetical protein	NA	NA	NA	NA
WP_003238337.1\|2684857_2686009_+	carboxypeptidase family protein	NA	NA	NA	NA
WP_015372444.1\|2686293_2686842_-	cytochrome b	NA	NA	NA	NA
WP_015372445.1\|2686838_2687921_-	catalase family peroxidase	NA	NA	NA	NA
WP_015372446.1\|2688091_2688598_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_015372447.1\|2688594_2689332_+	anti-sigma factor	NA	NA	NA	NA
WP_015372448.1\|2689328_2690309_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_015372449.1\|2690379_2692689_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_003238321.1\|2692800_2693589_-	molecular chaperone	NA	NA	NA	NA
WP_003238320.1\|2693614_2694103_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_003238318.1\|2694105_2694648_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_003238316.1\|2694666_2695209_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_015372450.1\|2695202_2695703_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_015372451.1\|2695886_2696978_+	cell division protein ZapE	NA	NA	NA	NA
WP_015372452.1\|2697018_2698317_+	protein kinase	NA	NA	NA	NA
WP_003238308.1\|2698627_2699335_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_015372453.1\|2699434_2700292_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015372454.1\|2700404_2701517_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_015372455.1\|2701520_2702348_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_003238300.1\|2702461_2703019_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	8.1e-18	40.2
WP_015372456.1\|2703292_2704183_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_015372457.1\|2704240_2706280_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_015372458.1\|2706539_2708039_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_015372459.1\|2708230_2709361_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_015372460.1\|2709365_2710400_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_003238285.1\|2710614_2711418_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_015372461.1\|2711598_2713473_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_003174819.1\|2713702_2713975_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	1.8e-18	59.6
WP_003238281.1\|2714124_2716521_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	4.6e-219	51.5
WP_003238279.1\|2716693_2717977_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.1e-138	59.6

DBSCAN-SWA_5

3250027 : 3300468

Pseudomonas_virus(47.37%)

tail,tRNA,portal,integrase,plate,terminase,protease,capsid,lysis,holin,head

attL 3269168:3269197|attR 3300595:3300624

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015372684.1\|3250027_3250756_+\|tRNA	alanyl-tRNA editing protein	NA	NA	NA	NA
WP_015372685.1\|3250821_3251538_-	hypothetical protein	NA	NA	NA	NA
WP_003230293.1\|3251882_3253073_-	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA
WP_015372686.1\|3253084_3255679_-	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA
WP_003230290.1\|3255818_3256946_-	2-methylcitrate synthase	NA	NA	NA	NA
WP_003230289.1\|3256989_3257883_-	methylisocitrate lyase	NA	NA	NA	NA
WP_015372687.1\|3257879_3258593_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_015372688.1\|3258864_3259401_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_003230283.1\|3259406_3260939_+	inactive transglutaminase family protein	NA	NA	NA	NA
WP_003230282.1\|3260938_3261925_+	alpha-L-glutamate ligase-like protein	NA	NA	NA	NA
WP_015372689.1\|3262027_3263371_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	7.2e-52	34.9
WP_015372690.1\|3263596_3263899_+	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	1.5e-05	31.6
WP_015372691.1\|3263898_3264255_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	1.4e-26	53.0
WP_003230278.1\|3264402_3265137_+	phosphoadenylyl-sulfate reductase	NA	NA	NA	NA
WP_015372692.1\|3265168_3265897_+	Asp/Glu/hydantoin racemase	NA	NA	NA	NA
WP_015372693.1\|3265914_3266601_-	HAD-IA family hydrolase	A0A1D8KNV9	Synechococcus_phage	1.5e-05	26.0
WP_049818587.1\|3266904_3267261_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	3.8e-29	61.7
WP_003230271.1\|3267311_3267677_+	DUF2784 domain-containing protein	NA	NA	NA	NA
WP_003230268.1\|3267731_3268310_+	DUF4337 domain-containing protein	NA	NA	NA	NA
WP_003230266.1\|3268674_3269010_+	hypothetical protein	NA	NA	NA	NA
3269168:3269197	attL	NA	NA	NA	NA
WP_015372695.1\|3270105_3270747_-	hypothetical protein	NA	NA	NA	NA
WP_015372697.1\|3271543_3272278_+	hypothetical protein	NA	NA	NA	NA
WP_015372698.1\|3272345_3273140_-	DNA adenine methylase	C7BGE1	Burkholderia_phage	4.9e-101	66.2
WP_015372699.1\|3273296_3274349_-\|portal	phage portal protein	A0A2H4J922	uncultured_Caudovirales_phage	9.6e-161	81.3
WP_015372700.1\|3274348_3276106_-\|terminase	terminase ATPase subunit family protein	Q9ZXM5	Pseudomonas_virus	6.7e-284	80.7
WP_015372701.1\|3276258_3277137_+\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	4.3e-82	60.4
WP_015372702.1\|3277182_3278190_+\|capsid	phage major capsid protein, P2 family	A4PE30	Ralstonia_virus	2.4e-124	66.4
WP_015372703.1\|3278201_3278921_+\|terminase	phage P2 small terminase subunit gpM-like protein	A0A2H4J948	uncultured_Caudovirales_phage	3.1e-70	60.2
WP_015372704.1\|3279019_3279316_+	hypothetical protein	E5FFG0	Burkholderia_phage	1.2e-07	52.5
WP_015372705.1\|3279312_3279774_+\|head	head completion/stabilization protein	Q9ZXM1	Pseudomonas_virus	4.8e-48	60.8
WP_041931514.1\|3279773_3279986_+\|tail	tail protein X	Q9ZXL9	Pseudomonas_virus	4.2e-23	77.8
WP_015372707.1\|3280013_3280367_+	hypothetical protein	Q9ZXL8	Pseudomonas_virus	6.5e-29	57.3
WP_015372708.1\|3280368_3280647_+\|holin	phage holin family protein	Q9ZXL7	Pseudomonas_virus	1.2e-22	69.8
WP_015372709.1\|3280643_3281489_+	N-acetylmuramidase family protein	Q9ZXL6	Pseudomonas_virus	3.6e-102	70.8
WP_015372710.1\|3281485_3281689_+	hypothetical protein	NA	NA	NA	NA
WP_015372711.1\|3281685_3282135_+\|lysis	phage lysis regulatory protein, LysB family	Q9ZXL5	Pseudomonas_virus	3.0e-23	45.0
WP_015372713.1\|3282225_3282708_+\|tail	phage tail protein	Q9ZXL3	Pseudomonas_virus	3.4e-44	57.9
WP_015372714.1\|3282697_3283156_+	phage virion morphogenesis protein	Q9ZXL2	Pseudomonas_virus	1.5e-49	66.0
WP_041931515.1\|3283157_3283952_-	DUF4145 domain-containing protein	M1PSB6	Streptococcus_phage	5.5e-36	41.0
WP_015372716.1\|3284094_3284673_+\|plate	phage baseplate assembly protein V	Q9ZXL0	Pseudomonas_virus	1.8e-60	63.0
WP_015372717.1\|3284669_3285014_+	GPW/gp25 family protein	Q9ZXK9	Pseudomonas_virus	2.1e-40	69.9
WP_015372718.1\|3285010_3285922_+\|plate	baseplate assembly protein	Q9ZXK8	Pseudomonas_virus	1.5e-122	75.1
WP_015372719.1\|3285921_3286539_+\|tail	phage tail protein I	A0A2H4JAU2	uncultured_Caudovirales_phage	3.1e-79	71.7
WP_015372720.1\|3286535_3287975_+\|tail	phage tail protein	A0A2H4JF09	uncultured_Caudovirales_phage	1.1e-79	72.6
WP_015372721.1\|3287984_3288374_+	hypothetical protein	NA	NA	NA	NA
WP_015372722.1\|3288481_3289657_+\|tail	phage tail sheath protein	Q9ZXK4	Pseudomonas_virus	1.8e-171	75.7
WP_015372723.1\|3289714_3290230_+\|tail	phage major tail tube protein	Q9ZXK3	Pseudomonas_virus	4.2e-69	73.5
WP_015372724.1\|3290278_3290632_+\|tail	phage tail assembly protein	Q9ZXK2	Pseudomonas_virus	6.9e-23	56.2
WP_015372725.1\|3290640_3290760_+\|tail	GpE family phage tail protein	Q9ZXK1	Pseudomonas_virus	8.5e-10	76.9
WP_015372727.1\|3292614_3293055_+\|tail	phage tail protein	A0A2H4JG54	uncultured_Caudovirales_phage	2.5e-54	67.8
WP_015372728.1\|3293051_3294320_+	phage late control D family protein	Q9ZXJ8	Pseudomonas_virus	1.0e-188	79.4
WP_157225361.1\|3294352_3294520_-	hypothetical protein	NA	NA	NA	NA
WP_015372729.1\|3294655_3295450_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_015372730.1\|3295529_3295877_-	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	1.2e-19	43.8
WP_015372731.1\|3295961_3296174_+	DNA-binding protein	A0A2H4JE67	uncultured_Caudovirales_phage	1.2e-09	50.8
WP_049818588.1\|3296203_3296677_+	hypothetical protein	A0A2H4JG61	uncultured_Caudovirales_phage	3.2e-39	52.9
WP_015372733.1\|3296673_3296970_+	ogr/Delta-like zinc finger family protein	Q9ZXJ1	Pseudomonas_virus	1.9e-34	71.3
WP_015372736.1\|3297773_3298025_+	hypothetical protein	NA	NA	NA	NA
WP_049818589.1\|3298037_3298682_+	hypothetical protein	A0A0U1SZL2	Pseudomonas_phage	6.9e-61	62.1
WP_015372738.1\|3298671_3298968_+	hypothetical protein	NA	NA	NA	NA
WP_041931516.1\|3298970_3299180_+	hypothetical protein	NA	NA	NA	NA
WP_015372739.1\|3299274_3300468_+\|integrase	site-specific integrase	A0A2H4JGM5	uncultured_Caudovirales_phage	4.9e-137	59.7
3300595:3300624	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4240382 : 4284453

Tupanvirus(25.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003238058.1\|4240382_4240883_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_015373128.1\|4241056_4241944_+	acyltransferase	NA	NA	NA	NA
WP_015373129.1\|4241940_4242513_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_015373130.1\|4242642_4243269_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_015373131.1\|4243265_4243943_+	anti-sigma factor	NA	NA	NA	NA
WP_003238069.1\|4244028_4244487_+	anti-sigma factor	NA	NA	NA	NA
WP_015373132.1\|4245010_4245364_+	hypothetical protein	NA	NA	NA	NA
WP_003234428.1\|4245409_4246609_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	2.2e-12	30.7
WP_003234431.1\|4246792_4247650_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_003234433.1\|4247660_4248293_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_015373133.1\|4248434_4251452_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_003234437.1\|4251448_4251751_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_003234439.1\|4251766_4253017_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_003234441.1\|4253039_4254293_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	2.8e-98	52.6
WP_015373134.1\|4254447_4255176_-	TraX family protein	NA	NA	NA	NA
WP_003234444.1\|4255266_4256307_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_003234447.1\|4256427_4257528_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_015373135.1\|4257810_4259106_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_003234450.1\|4259656_4260427_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_015373136.1\|4260437_4261658_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_015373137.1\|4261657_4263601_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_003234456.1\|4263768_4265829_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_003234458.1\|4265844_4266375_-	hypothetical protein	NA	NA	NA	NA
WP_015373138.1\|4266427_4267405_-	dipeptidase	NA	NA	NA	NA
WP_003234461.1\|4267624_4268026_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_003234462.1\|4268066_4268483_+	DUF3010 family protein	NA	NA	NA	NA
WP_015373139.1\|4268567_4269512_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_003234464.1\|4269704_4270643_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003234465.1\|4270715_4271603_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_015373140.1\|4271741_4272707_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_015373141.1\|4272762_4273254_+	thioesterase family protein	NA	NA	NA	NA
WP_015373142.1\|4273477_4273741_+	hypothetical protein	NA	NA	NA	NA
WP_003234469.1\|4273836_4274937_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_015373143.1\|4275429_4276806_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_003234471.1\|4277219_4278167_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015373144.1\|4278236_4279082_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_003234473.1\|4279078_4280257_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.0e-27	37.3
WP_015373145.1\|4280492_4281086_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_015373146.1\|4281148_4282621_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_015373147.1\|4282758_4284453_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	5.3e-52	30.5

Anti-CRISPR protein detection

Acr_ID: NC_020209.1|WP_041931516.1|3298970_3299180_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_020209.1|WP_041931516.1|3298970_3299180_+|hypothetical-protein

3298970_3299180_+

69 aa aa

3250027-3300468

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_020209_1	Orphan	1.1\|1583278\|25\|NC_020209\|CRISPRCasFinder	1583278-1583302	25	3268351-3268375	1

1. spacer 1.1|1583278|25|NC_020209|CRISPRCasFinder matches to NC_020209 position: 3268351-3268375, mismatch: 1

aatgccgttcagttaagtgcagatt	CRISPR spacer
aatgccgttcagttaagcgcagatt	Protospacer
*****************.*******

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_020209

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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