CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_019780	Dactylococcopsis salina PCC 8305, complete genome	50 crisprs	RT,Cas14u_CAS-V,cas14j,csx21,PD-DExK,csx10gr5,cas3,c2c9_V-U4,DinG,cmr4gr7,csa3,WYL,Cas9_archaeal	22	7	0	0

1. NC_019780

CRISPR-Cas detection and classification

Crispr_ID: NC_019780_1

• CRISPR_ID: NC_019780_1
• CRISPR_location: 209935-210021
• CRISPR_type: TypeV
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas14j

Consensus repeat of NC_019780_1

Consensus_repeat	Method
TTAGAATTAGTGTTGGGTTTCGC	CRISPRCasFinder

spacers of NC_019780_1

>1.1|209958|41|NC_019780|CRISPRCasFinder
TTGGAGACGTTCCATGGAACGTCTCTACCCAACCTACCTGT

CRISPR arrays and Neighbor proteins around NC_019780_1

CRISPR arrays

The CRISPR arrays of NC_019780_1

>merge|NC_019780|1|209935-210021|CRISPRCasFinder
TTAGAATTAGTGTTGGGTTTCGCTTGGAGACGTTCCATGGAACGTCTCTACCCAACCTACCTGTTTAGAATTAGTGTTGGGTTTCGC

>NC_019780|1|1|209935-210021|CRISPRCasFinder
TTAGAATTAGTGTTGGGTTTCGC	TTGGAGACGTTCCATGGAACGTCTCTACCCAACCTACCTGT
TTAGAATTAGTGTTGGGTTTCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228025.1|198976_199912_-|cation-transporter	unknown	unknown	gnl|CDD|223131
NC_019780.1|WP_041235247.1|213428_213836_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228027.1|200242_201001_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319830
NC_019780.1|WP_015228032.1|204997_206032_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl|CDD|234858
NC_019780.1|WP_156800598.1|212237_212387_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235244.1|203546_203735_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235252.1|218284_218542_-|hypothetical-protein	unknown	unknown	gnl|CDD|224319
NC_019780.1|WP_015228039.1|218782_219634_-|hypothetical-protein	unknown	unknown	gnl|CDD|224117
NC_019780.1|WP_015228034.1|207256_209917_-|class-I-SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl|CDD|223934
NC_019780.1|WP_041235246.1|212712_213429_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228035.1|210062_212186_+|hypothetical-protein	unknown	unknown	gnl|CDD|380205
NC_019780.1|WP_041235251.1|217779_217971_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228030.1|202473_203553_+|FAD-binding-oxidoreductase	unknown	unknown	gnl|CDD|223737
NC_019780.1|WP_015228031.1|203725_204946_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|272992
NC_019780.1|WP_015228026.1|199995_200232_+|hemerythrin-family-protein	unknown	unknown	gnl|CDD|213982
NC_019780.1|WP_015228036.1|213846_214206_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235249.1|215605_216190_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235250.1|216383_217505_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl|CDD|223747
NC_019780.1|WP_015228029.1|202012_202477_+|photosystem-II-protein-PsbQ	unknown	unknown	gnl|CDD|274404
NC_019780.1|WP_015228028.1|201091_201940_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|178633

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_041235250.1|216383_217505_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	1.2e-109	362.1	13.5

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228025.1|198976_199912_-|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	9.80695e-78
NC_019780.1|WP_015228029.1|202012_202477_+|photosystem-II-protein-PsbQ	gnl|CDD|274404	TIGR03042, hypothetical_protein, photosystem II protein PsbQ. This protein through the member sll1638 from Synechocystis sp. PCC 6803, was shown to be part of the cyanobacteria photosystem II. It is homologous to (but quite diverged from) the chloroplast PsbQ protein, called oxygen-evolving enhancer protein 3 (OEE3). We designate this cyanobacteria protein PsbQ by homology. [Energy metabolism, Photosynthesis].	2.32776e-46
NC_019780.1|WP_015228027.1|200242_201001_+|HAD-IA-family-hydrolase	gnl|CDD|319830	cd07528, HAD_CbbY-like, subfamily of beta-phosphoglucomutase-like family, similar to Rhodobacter sphaeroides xylulose-1,5-bisphosphate phosphatase CbbY. This family includes Rhodobacter sphaeroides and Arabidopsis thaliana xylulose-1,5-bisphosphate phosphatase CbbY which convert xylulose-1,5-bisphosphate (a potent inhibitor of Ribulose-1,5-bisphosphate carboxylase/oxygenase, Rubisco), to the non-inhibitory compound xylulose-5-phosphate. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate, and Escherichia coli 6-phosphogluconate phosphatase YieH. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	9.41585e-77
NC_019780.1|WP_015228032.1|204997_206032_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl|CDD|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	1.35766e-134
NC_019780.1|WP_041235252.1|218284_218542_-|hypothetical-protein	gnl|CDD|224319	COG1401, McrB, GTPase subunit of restriction endonuclease [Defense mechanisms].	7.02587e-09
NC_019780.1|WP_015228039.1|218782_219634_-|hypothetical-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	2.2034e-16
NC_019780.1|WP_015228035.1|210062_212186_+|hypothetical-protein	gnl|CDD|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	4.90733e-08
NC_019780.1|WP_015228030.1|202473_203553_+|FAD-binding-oxidoreductase	gnl|CDD|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.58406e-57
NC_019780.1|WP_015228031.1|203725_204946_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	3.67118e-168
NC_019780.1|WP_015228026.1|199995_200232_+|hemerythrin-family-protein	gnl|CDD|213982	cd12107, Hemerythrin, Hemerythrin. Hemerythrin (Hr) is a non-heme diiron oxygen transport protein found in four marine invertebrate phyla including priapulida, brachiopoda, sipunculida, and annelida, as well as in protozoa. Myohemerythrin (Mhr), a hemerythrin homolog, is found in the muscle tissue of sipunculids as well as in polycheate and oligocheate annelids. In addition to oxygen transport, Mhr proteins are involved in cadmium fixation and host anti-bacterial defense. Hr and Mhr proteins have the same "four alpha helix bundle" motif and active site structure. Hr forms oligomers, the octameric form being most prevalent, while Mhr is monomeric.	5.48587e-16
NC_019780.1|WP_041235250.1|216383_217505_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.66678e-58
NC_019780.1|WP_015228034.1|207256_209917_-|class-I-SAM-dependent-DNA-methyltransferase	gnl|CDD|223934	COG1002, COG1002, Type II restriction enzyme, methylase subunits [Defense mechanisms].	6.68122e-29
NC_019780.1|WP_015228028.1|201091_201940_+|alpha/beta-fold-hydrolase	gnl|CDD|178633	PLN03084, PLN03084, alpha/beta hydrolase fold protein; Provisional.	1.01938e-43

Protein sequences

>NC_019780.1|WP_015228034.1|207256_209917_-|class-I-SAM-dependent-DNA-methyltransferase
MSATLETVQTFINFCSQYIEGKEKQDAQTFLDRFFRVFGYKGALEAGAKYEQAIRKGSKQGKTGFADLVWKPRVLIEMKKRGEDLGKHYSQAFEYWLRLIPDRPRYVVLCNFDEFWIYDFNQQLDEPVDRVFLTQLWERITAFGFMEVAAQTPVFRNNQVEITETAARRMGELFKILYQRGDKEGFDRLSAQRFILQCVLAMFAEDRGLLPRDQFISCVQDCLNGESSYDLIGGLFREMNQPRITPAGRYQGVDYFNGGLFKTIHPIELTKPELNYLDVAARQDWNKIRPAIFGNIFEGTADENERHSYGIHYTSEADIMKIVRPTISRYWEEKIDAANTIKDLTKLQLELQSYRILDPACGSGNFLYIAYQELKRIEKTLLEKIDRKRRKPTQQTEMGLVTPKQFYGIDSNPFAVELARVTLMIARKVAIDKFNSSEPSLPLDTLDQNIVCQDALFCNWTKADAIIGNPPFLGGKQLRMTLGDNYAEKVFQQFPEVRDSVDFCCYWFRLAHDYLEEKGRVGLVGTNSISQGKSRQASLDYITQNQGFIYEAVSTQPWSGTAKVHVSIVNWSREKPSQFILDDERVNRISSSLKASINVSDAIRLEKNKGMSFQGIIPVGKGFYITKEKAEEWIKENPKNKAVIKLSCSAGDLTDKPNGYPSRWIIDFNDMSLEEASNYALPFKHIKATVKPEREKNRDAKAREYWWRFLRARPKMRKQIADLSCYFAVPSHSKWFIFLPINQQWIPNNSTTIVASDDFYVLGILTSNVHRQWVKAQSSTLKGDTRYTPKTCFETFPFPENPSTEIMENIRQTTIKLHEYRSEQMEQKQWGITKLYNQFFHEPSSQLYQLHEQLNKQVMEAYQFNPKKDILEQILALNLKQSQPDN
>NC_019780.1|WP_015228032.1|204997_206032_+|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MRFSEVVAHLSQKISVTAKEGKNPEIKGVSPIEEATMQTISYIEGRKFAHYINITPASALILPQDETLQAQADDQGIPWVAAEVPRLLFAHAIDLFYRPFHPTPDVHPSAVIDPSAEIQENVYIGANVVVYPRVKISSGVCIYPNVVIYPDVTIDDRAILHANATIHERTQIGKDCIIHSGAVIGGEGFGFVPTSQGWLKMQQSGCVVLEEGVEVGSNSNIDRPAVGETRIGRNTKFDNAVHIGHGCRVGENCAFAAQVVLAGGVKVGNNVLLGGQSAIANQITIGDGARATGHSGITRDVKAGEIVSGSPAVPNHIYLRSSAIYKRLPEMYRMFQKLVKGSKN
>NC_019780.1|WP_015228031.1|203725_204946_+|NAD(P)/FAD-dependent-oxidoreductase
MRVIVIGGGAAGFFAAITCANLSPETEVILLEAGKHTLAKVRVSGGGRCNVTHHCFDPTLLVKAYPRGGKALRGAFTRFQPQDTIEWFEQRGVKLKTESDGRMFPVTDDSETIINCLVKEAIAQGVKIKTGAKVQWLSYEDDRFIVELKGGDYLSADRAILATGSQRLPYQWLSQFGHNIIPPIPSLFTFNITDERLQDLAGISVENVEVKLDIKGKEKYLQNGQLLITHWGLSGPAVLKLSAYGARVLHDHNYQLGLWVNWLPSENLETIKQQLMAQKEQTPRRQVVSFSPVSIPRRLWEKLALASGISATQRWAEVSKKQIITLANELIMGNYQIQGKGVFKEEFVTCGGVDLKEVNFKTMESKLVAGLYFAGEILDIDGITGGFNFQNAWTTGWLAGNGIIEQ
>NC_019780.1|WP_041235244.1|203546_203735_+|hypothetical-protein
MLKKSIGWFSKAKGKRQEAKGKRQEARGKRQEARGKRQEAKGKRQKARGKRQKLIINNLLCV
>NC_019780.1|WP_015228030.1|202473_203553_+|FAD-binding-oxidoreductase
MKRVLIIGGGIVGATIAYELSLDRRFEITLLDRSTPNEASTGAALGILMGIISQKTKGRAWRLREASLRRYPHLIAAISEQTGETIPQVQGLINLCFSEAEMETWQQLATVRHSQGWELELWDTAQLKTALPALNISDLVGAVYSPQDFQVNPQALTQTLIKASEQNGVNIQRGVEATEVSVTSNENYQQCHTVHSNEGDWETDYLIVAAGLGSFPLTRQLQQPLTLRPVLGQAMRVRLNTNLSETQLQRVITGDDVHVIPLGNQEYWVGATVEFPDQPVETPLDTVWEKARRFYPPLADAEILETWSGKRPRPEGQGAPVIEYLKGYDNVILATGHYRNGVLLAPATAAQVKQLISAC
>NC_019780.1|WP_015228029.1|202012_202477_+|photosystem-II-protein-PsbQ
MFNKRSILSLLLALVATVLVSCGGGDSNTPPPTYSSEQIQQIERAATPVIEARKRLTKLESYIKQKQWSDAFSLIHGPLGGLRQEMGYVTRNLLPRDQKPARKYARELFQDIERVDASIEAEAASRALENYDRALKDFDQYLNLLPESQATETT
>NC_019780.1|WP_015228028.1|201091_201940_+|alpha/beta-fold-hydrolase
MKIETKTIESKGQQWFYRYGQLRNENQETPVVLLHGLLAHSYCWRGLLEDITDAGFTVYAPDWLGEGYSGKPSPREFSYQPDAFISALETLFQDLNLSRFHLVVQGFIGSIGLQYAFRHPEQIERLVILNTPLSSAARLPWLMRQWSFPLMGEMLTQDPLLVDRTLEKGSGYVISEENLGVYRQPFLKNSQAGRSLVATIKNLNLPKAMQEIEAGWKNWEQPTQILWGMDDPWLSATVPEAIAKEKKNIRFVKLEEAKHYPQEHWSEEISPIMLTFLRQQIV
>NC_019780.1|WP_015228027.1|200242_201001_+|HAD-IA-family-hydrolase
MSAFIFDVDGTLAETERYGHRVAFNRAFADAGLNWYWSESLYGKLLSISGGKERLHHFLTHYVSNSESIANQEQLVKQLHAAKRHHYHYILHNGEIGLRPGVKRFLKEAYQTGMRLAIATTSSLESVNLLLATNLGEAYQSYFEIIAAGDIVPQKKPAPDIYQYVLDKMALSPQAALAFEDSQQGLKAATMAKIKTVITVNHYTLDQDFSDAVLVLDHLGEPDDRAFTIYNAAFSVHQSYFDLNLAKQLLQH
>NC_019780.1|WP_015228026.1|199995_200232_+|hemerythrin-family-protein
MQIAHWSEDYETGFPVIDQQHQQMFALVNQLQEAMLKSADPTLLKQLLNALLKDTIAHFTLEEDLMLEHGYPSFQPVY
>NC_019780.1|WP_015228025.1|198976_199912_-|cation-transporter
MNATDNRPQVRRVLLLTLILNLLVMGLKFIVGFLTGSLSIQADALHSFTDSANNVLGLVSNQFASPQPDREHPYGHQKFEALGALGIAVFLGITCLEIIQRTIERLFQGTNAINLTHWELWILILVLGINIFVAFYERHIGRKLNSSILIADSYHTMGDIWITLVVIIGLLGMWLGESWEIPQLQWLDVILALPVAILVLKSGWEVVRENLPWLVDEIAIPPEVINRIALQIPGVINCHDIASRGVVGQQVFIELHMIVATDDVEIAHDITEAVEQKLEEYFSPVRVLIHIEPPDYQSPKISFSDDSEEAN
>NC_019780.1|WP_015228035.1|210062_212186_+|hypothetical-protein
MNQPTFTVTNTNDSGEGSLRNAITQANLNLGEDVINFDSNLRGETIALTSGQFVIEDDLIIEGLGKDSLTISGQNTSRIFLLESTSVDPKTLTITDLTLEDGLATPTDTVSRGGAIQTEHQGKLTVENVIFRDNQADDGGGAISSAFEGELTVIASQFLDNEAIAGNDERGAGAIAFFGPGQLTVSNTDFIGNRGINGAAINNLNGRVEIDNSRFLDNDVLAATVAAGEPRSTLRGYGGAIFADRASARNDESGGTIRLRNSQFEGNQGRSAGGAVYVFTGGSDRLEVINSTFRDNVAVGLPGGEMGNSGAIELQSNEVNQGFVVLNSEFIGNRAVDRGGASRTRNAPTTIINSIFADNGTTIAPTESFTGGVGGALQLGGNVTATITNSTFRENFAMWVGGAIGGNAEITVNNSIFDRNRADNGINDWNIQQQAVPDLSGVNNLQFPEDGGEVTPNIQVADPMLDQSQLPSLGSRAIDGGDNSLLPTDRFDLDGDGDITETIPFDERGEGFDRIVNGKLDLGALERQNREELVFGSTAADSLSSDGKIIFAGAGLDQVEGSTDAIASHRIYGGSGDDELFGGSNDRVFGNTGNDRLSVTGSNNRLYGGEGNDRLFVGAGGGNILTGGEGSDQFSIATNNVPDASNSITDFTSGEDIIGFEGFPDLTFNDLTFRETEGNTVISFDTEIAILFGIQTDDLSANDFEFV
>NC_019780.1|WP_156800598.1|212237_212387_+|hypothetical-protein
MKGNATQQQYSLFVICYLFTGHWSLVTDHCFGLIYYWFSCKITESDYLF
>NC_019780.1|WP_041235246.1|212712_213429_-|hypothetical-protein
MLIDLDSFHPQKLLPLRLESHSNSSYPIPILDQQSDVSFVSSEISEEVKSSYDRIIESLSYYFLDTHFPQLVGNQRARKSIENYLKKQVFLQQLSRVNSSPRQILLEVNTGENLIYKTITVSPEEIRRIVTETVNLSALETLSNHHRDYIFVIVSHWNNFLSQENSNLVYINPDESQFGEILAEKAINEFPLFGIALDRIQYQVRINNQETWIQLTNSEINISDEGNPQTLQGIIPET
>NC_019780.1|WP_041235247.1|213428_213836_-|hypothetical-protein
MTRLFKLESYPNCCQDAHLFEKSIEHLSPDENSLPLNYKRFLANHQHYPYLPQPLFVDELPNSLTFNSHSPSPQHLGEEVTDGEDKQLFIIPDTIDLMTLSSRGIFGFNESYLYRSAYLYWNYVSQLPQLGEINA
>NC_019780.1|WP_015228036.1|213846_214206_-|hypothetical-protein
MTRLFKLESYPNCCQDAHLFEKSIEHLSPDENSLPLNYKRFLANHQHYPYLPQPLFVDELPNSLTFNSHSPSPQHLGEEVTDGEDKQLFIIPDTIDLMTLSSRLGGEKRNPTLFLFIDN
>NC_019780.1|WP_041235249.1|215605_216190_-|hypothetical-protein
MSQQLETEFPHLTETRRDLLAKTLLIHTGLLRKQLKLFQLYQNLSDEGRERLERNKPILSAIKNCLQPQQQWLQETRFDLIIVEDSHHLHWKDLILIAGMGDKLVLLGEEIPQRQTGRQRKKVSFHRYPYSFHWLSHHLLPCYTHILSEQYRLHPQLATPIYNLISNSNRWIQNNFLKPLVMKYKPTSKTSIPK
>NC_019780.1|WP_041235250.1|216383_217505_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MRKAIKVRLYPNSSQQQLLAQSFGNCRWLWNFGLNLMNQTYKETGKGLSSYDIKKQIPDLKKEREWLKLTYSQCLQQVCINLNTAFTNFFQGRARYPKFKSKHGKQSIQYPQNVEVKEDCLKFPKLGEIKAVLHRSIKGSVKTVTISKNTCGEYYASILVEDGKEKPKPSSEGKAVGIDLGLNHYAITSNGDKFNNPRWMDKHEKNLKIKQQQLSRKQKGSNNRNKARHQVARVHKKVSNSREDFLHKLSRSLVDENQVICVENLAVKNMMKNHNLAKAISQVGWGQFCTMLKYKAEQDGKTYVEVDRFFPSSKTCNVCLNQVDSLPLDVRSWKCSNCGTEHDRDINAAKNIRDEGLRIIACGTRDDSLVRQG
>NC_019780.1|WP_041235251.1|217779_217971_-|hypothetical-protein
MGKIQRSIDWFYQLPEVKTIQTQQYHFTKPNYVLQQNPIYRRFYQGYLDYIEKRYLTLSPKTG
>NC_019780.1|WP_041235252.1|218284_218542_-|hypothetical-protein
MRGLYQFNHQETLQDRLVIVLLDEMNLARVEYYFSEFLSKLETRRSQDTYLDIDVGSIPLPDEERRVKIPEQFLLVGTMNEDETT
>NC_019780.1|WP_015228039.1|218782_219634_-|hypothetical-protein
MNSQKIILYVSLAVSGVIMAVLGFQNPLTLLGVIAGGGAGFSGMMVYYRRLDQENARLQQQLNAYQEYGQVEQQLPRLQNSYSDLVTQNQQLEEQHQQTTDNLAQINEQIAGKRERLRQLNQSLEDSEQRRETQQQTLNNLEERIASLNQDYPNLSDQEALQREIQELRSNRSGLQGEIQSLQQHTEQKQERLQQLETQLETQQNEFNQQQQQQVELAGDIRQKQSQQQSLTEEIEQLQQQKEELNQITTDLEFLRVNYDRLDAERQEHENRIEELRPEIERL

Crispr_ID: NC_019780_2

• CRISPR_ID: NC_019780_2
• CRISPR_location: 302212-302347
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_2

Consensus_repeat	Method
CTACTCTCCACCCAACCTACGTCT	CRISPRCasFinder

spacers of NC_019780_2

>2.1|302236|46|NC_019780|CRISPRCasFinder
CACTCATTGACCGTAGGGTGGGCAATGCCCACCCTACAAGATGTAA
>2.2|302306|18|NC_019780|CRISPRCasFinder
GATTGGTGTTGGGTTTCG

CRISPR arrays and Neighbor proteins around NC_019780_2

CRISPR arrays

The CRISPR arrays of NC_019780_2

>merge|NC_019780|2|302212-302347|CRISPRCasFinder
CTACTCTCCACCCAACCTACGTCTCACTCATTGACCGTAGGGTGGGCAATGCCCACCCTACAAGATGTAACTACTCTCCACCCAACCTACGTCTGATTGGTGTTGGGTTTCGCTACTCTCCACTCAACCTACGTCT

>NC_019780|2|2|302212-302347|CRISPRCasFinder
CTACTCTCCACCCAACCTACGTCT	CACTCATTGACCGTAGGGTGGGCAATGCCCACCCTACAAGATGTAA
CTACTCTCCACCCAACCTACGTCT	GATTGGTGTTGGGTTTCG
CTACTCTCCACTCAACCTACGTCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228120.1|301174_301501_+|hypothetical-protein	unknown	unknown	gnl|CDD|375502
NC_019780.1|WP_015228124.1|305320_305977_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NC_019780.1|WP_015228128.1|310156_311464_+|O-antigen-ligase-family-protein	unknown	unknown	gnl|CDD|377422
NC_019780.1|WP_041235621.1|297670_299455_-|AMIN-domain-containing-protein	unknown	unknown	gnl|CDD|378342
NC_019780.1|WP_015228116.1|296506_297076_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|226983
NC_019780.1|WP_156800602.1|305003_305132_+|AraC-family-transcriptional-regulator	unknown	unknown	unknown
NC_019780.1|WP_015228112.1|294451_295021_-|hypothetical-protein	unknown	unknown	gnl|CDD|237171
NC_019780.1|WP_015228122.1|303096_303783_-|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|183588
NC_019780.1|WP_015228126.1|307778_309227_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NC_019780.1|WP_156800853.1|297214_297757_+|YdcF-family-protein	unknown	unknown	gnl|CDD|99750
NC_019780.1|WP_015228119.1|300051_301011_+|NTF2-domain-containing-protein	unknown	unknown	gnl|CDD|370323
NC_019780.1|WP_015228111.1|293865_294408_-|hypothetical-protein	unknown	unknown	gnl|CDD|237171
NC_019780.1|WP_015228127.1|309311_310160_+|hypothetical-protein	unknown	unknown	gnl|CDD|227078
NC_019780.1|WP_015228125.1|306240_307758_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NC_019780.1|WP_156800601.1|303868_304909_-|phosphotransferase	unknown	unknown	gnl|CDD|270702
NC_019780.1|WP_041235256.1|296200_296401_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228121.1|302395_302998_-|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl|CDD|178955
NC_019780.1|WP_041235255.1|295659_296124_-|hypothetical-protein	unknown	unknown	gnl|CDD|367360
NC_019780.1|WP_015228113.1|295118_295562_-|hypothetical-protein	unknown	unknown	gnl|CDD|215180
NC_019780.1|WP_015228129.1|311452_312112_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228120.1|301174_301501_+|hypothetical-protein	gnl|CDD|375502	pfam18032, FRP, Photoprotection regulator fluorescence recovery protein. This family includes fluorescence recovery protein (FRP) domain, which is found in Synechocystis sp. PCC 6803 substr. Kazusa. FRP causes the dissociation of the orange carotenoid protein (OCP) from the phycobilisomes by interacting with the C-terminal domain of OCP, accelerating the conversion of the active red OCP to the inactive orange form. A patch of residues (W50, D54, H53, and R60), contributed by both chains of the FRP dimer cause the acceleration of the OCPr to OCPo conversion. Mutation of the absolutely conserved amino acids (R60) affect the activity of FRP.	3.44262e-43
NC_019780.1|WP_015228124.1|305320_305977_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.24091e-14
NC_019780.1|WP_015228128.1|310156_311464_+|O-antigen-ligase-family-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	5.84484e-12
NC_019780.1|WP_041235621.1|297670_299455_-|AMIN-domain-containing-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.8292e-33
NC_019780.1|WP_015228116.1|296506_297076_+|Uma2-family-endonuclease	gnl|CDD|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.09522e-24
NC_019780.1|WP_015228112.1|294451_295021_-|hypothetical-protein	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	4.79637e-06
NC_019780.1|WP_015228122.1|303096_303783_-|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|183588	PRK12552, PRK12552, ATP-dependent Clp protease proteolytic subunit.	7.29435e-158
NC_019780.1|WP_015228126.1|307778_309227_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.80935e-93
NC_019780.1|WP_156800853.1|297214_297757_+|YdcF-family-protein	gnl|CDD|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	5.22006e-21
NC_019780.1|WP_015228119.1|300051_301011_+|NTF2-domain-containing-protein	gnl|CDD|370323	pfam09150, Carot_N, Orange carotenoid protein, N-terminal. Members of this family adopt an alpha-helical structure consisting of two four-helix bundles. They are predominantly found in prokaryotic orange carotenoid protein, and carotenoid binding proteins.	1.71376e-93
NC_019780.1|WP_015228111.1|293865_294408_-|hypothetical-protein	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.00046279
NC_019780.1|WP_015228127.1|309311_310160_+|hypothetical-protein	gnl|CDD|227078	COG4735, COG4735, Uncharacterized protein conserved in bacteria [Function unknown].	3.50899e-63
NC_019780.1|WP_015228125.1|306240_307758_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	3.81675e-88
NC_019780.1|WP_156800601.1|303868_304909_-|phosphotransferase	gnl|CDD|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.06596e-50
NC_019780.1|WP_015228121.1|302395_302998_-|ATP-dependent-Clp-protease-proteolytic-subunit	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	3.28763e-125
NC_019780.1|WP_041235255.1|295659_296124_-|hypothetical-protein	gnl|CDD|367360	pfam03154, Atrophin-1, Atrophin-1 family. Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.	0.00073815
NC_019780.1|WP_015228113.1|295118_295562_-|hypothetical-protein	gnl|CDD|215180	PLN02316, PLN02316, synthase/transferase.	0.000142525
NC_019780.1|WP_015228129.1|311452_312112_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.14846e-50

Protein sequences

>NC_019780.1|WP_015228120.1|301174_301501_+|hypothetical-protein
MSTTENYWSSTEKEIAQRAFEKARSREINTLIETVRNAASSVSNLDEIWRLHDYLSSKRYEIDGKYDDRESVLIFVFSQLVKEGWLSVEDLEGLNSDKIAKLNALAKM
>NC_019780.1|WP_015228119.1|300051_301011_+|NTF2-domain-containing-protein
MPFTIDSARNIFPNTLAADAVPATIARFEQLTAEDQLALIWFAYLEMGKTITIAAPGAASMQFAERTLEQIRKMSFQEQSQVMCDLVNRADTEICRTYATWSPNIKLGFWYKLGEWMEEGIVAPIPEGYQLSANASAVLQAIRGLESGQQITVLRNSVVSMGFDPNKMGTYTPVTEPVEPPQEASERQEVAIPGVTNPTILAYMNNMNANDFDALIELFLPDGALQPPFQRPIIGKESIMRFFKQECQNLKLLPENGVVEPAEDNYTQVKVTGKVQSPWFGAKVGMNIAWRFLLDPNDKIFFVAIDLLASPQELMNFAR
>NC_019780.1|WP_041235621.1|297670_299455_-|AMIN-domain-containing-protein
MRWNQLLTKIGLGLTTTVICILLARISYAQPTSSDITILRRGEEISLNGNKLPVSWRQWQTNNQTYLGITDASAQQRLGLELLSNDRPQMQPVWWFGGENRSAYSLTAQHLETDRYLDFTPILRESSEQIAVFQNRLEITTNPAQVQEIRIGKQSWGNRIVIDLDRPILWQQKQGRREATLTLPAFTPPEISQQFPPPPEIEEAETDQPLLVVTSEANETQLQIQLPESLKLRVSTLANPNRLVIDLRADHLKSREIRWSSGINWKQDYIPLGEAAFAVTWLEIDPRLTNLDLIPIWGNLQQMQGITTLAKMGQENRANLGINGGFFNRDTKLPLGAIKREGEWYSSPILNRGAIGWDNQGGITMDRLRYEETLITDAGERFSLQALNSGYVQSGIARYTPTWGFTYTPLTDEETIVVVENQTVQRFITGNFDQDQTITIPRNGYLLTIRGQPELSSKLAVGMKLQLQNQTFPPRLAGYPHVLAAGPLLLKNGQMVLDAAGENFSQAFINQKADRSAIALTRSGKLLLVAMGDGIERKGPTLAEATRILQRLGAIDALNLDGGSSTSLYLGGEIINRPPATAARVHNGIGFYLR
>NC_019780.1|WP_156800853.1|297214_297757_+|YdcF-family-protein
MLGGDFSRDRATAELGKKHPNLSIWLSGVYGGTRKIFVETNIDPSRIHYDDRATDTVTNFTTMIKPLQQNQIRHVYLVTSDYHMRRSLMIATIVFGSRGMIVTPVPVPSQREEETLLRAIRDLGRSIVWLFTGRTGASLKGRFNTATTGSYFLAQIKADSVMNPSSSRWRTIDDFTAKIE
>NC_019780.1|WP_015228116.1|296506_297076_+|Uma2-family-endonuclease
MAVTTASKPLTLEEFLKCPETKPAISEFIAGEIIQKPMPKGRHSCLQYETCHVINQVTKKQKIAYAFPELRCSFGNRSLVPDIAVFRWDNIPFLNNGEVPDRFSLPPNWVIEILSPEQKPNQVIGNILYCIEKGSELGWFIDPDDHSILVFWRDRAPSLQQENDSLPLLSGIELELTVDQLFSWLKMGI
>NC_019780.1|WP_041235256.1|296200_296401_-|hypothetical-protein
MGKMGKMGEMGEMGKMGEKNRSLISLVSLVSLVSHCSLASSVAKIFESMNTDISDDYHFAIPLKLA
>NC_019780.1|WP_041235255.1|295659_296124_-|hypothetical-protein
MESPQRKIWLNFLSLLPSTLLSVLTIAVAFLRFYDQQDFTFLATIEQPREASNQLTVAALVVALVAFGVEWDRRNRETARQEAETARADNERIERRQREIQRDRAADEERERAARRARIQNRGAILQIRYQIEPNEANGQALRNFLAFLQEYGE
>NC_019780.1|WP_015228113.1|295118_295562_-|hypothetical-protein
MELPQRKIWLNFLSLLPSTLLSVLTIAVAFLRFYDQEDFTFLAIIEQPREASNRLTVAALVVALVAFGVEWDRRNRETARQEAETARAENERAEERERAAEERERAARRARIQNRGTILQIRYQIEPNEANGQALRDFLAFLQEYGE
>NC_019780.1|WP_015228112.1|294451_295021_-|hypothetical-protein
MESPQRKIWLNFLSLLPSTLLSVLTIAVAFLRFYDQQDFTFLATIEQPRVWSNRLTLAALVVALVTFGVEWDRRNRETARTENERVERRQREIQRDRAAAEERERANRERNRAAEERERANQERNRAAEERERANRERNRAAEERERAARRARIQNRGAILQIRYQIEPNEANGQALRNFLAFLQEYGD
>NC_019780.1|WP_015228111.1|293865_294408_-|hypothetical-protein
MKTSSPWQNFLALLPGTLLTLLTITVAFLRFYDEQDFTILGQIREPRLWSNRLTVAALLVAVVNFSVEWNRRNRETNRLAEDDQRRGDEERRRREEATRTENERVERRQGEIQRDRAAAEERERANRERNRAAEERERAARRTRIQNRGTILQIRYQVEPNEANGQALRNFLAFLEEYGE
>NC_019780.1|WP_015228121.1|302395_302998_-|ATP-dependent-Clp-protease-proteolytic-subunit
MPIGVPKVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGINDGLANQIIAVMLYLDSEDPSKPIYLYINSPGGSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLTAGTQGKRIALPHSRIMIHQPLGGTQGRRQATDIEIEAREILRIRQQLDEIMAKNTGQTVEKIKKDTDRDFFMSAEEAKNYGIIDRVIEEKNI
>NC_019780.1|WP_015228122.1|303096_303783_-|ATP-dependent-Clp-protease-proteolytic-subunit
MNSPIRGVQAPYYGGGNTRTPPPDLPSLLLKERIVYLGLPLVSPDEYKEQIGIDVTELIIAQLLYLQFEDREKPIYMYINSTGTSWYGGESIGFETEAFAICDTLNYIEPPVNTICIGQAMGTAAMILSSGTKGYRASLPNATIILNQPRQGAQGQATDIQIRAKEVLENKQSMLSILSRNTGQPVEKIAKDSDRMFYLSPQEAKEYGLIDRVLESTKELPSTAGVLS
>NC_019780.1|WP_156800601.1|303868_304909_-|phosphotransferase
MDDFHRKLTLLTQSSIKSLPTHALQCSVTYSTIAPKAVTTAISSYYDLGQVKNCQFWYHGLSDIYRIETDTGFYIFRVSHHHWRSRSEIQFELEFLSFLRENKIPVASPLPTRTGELCLEIAAPEGVRYGTVFEYAAGSVPIGDLDCTQSHQLGETLAKLHQISYDFSPVSERSMLTPELIIDRSNQIIAPFLEHRPWDLQTLFSIADQVKAELQNLPQTKPFWTVCWGDPHSGNTHFTENNQLTLFDFDQCGYGWRAFDLGKFYQVSLQSGCTPKVREAVLQGYSSISPLRQIEIDCLPSLTVAAFIWAWGIHLNRAICFEYSRLDDHYFTRRLEKLKHLSSRNW
>NC_019780.1|WP_156800602.1|305003_305132_+|AraC-family-transcriptional-regulator
MVGLVRQKARGKRQKARGLHARGKKQKARGKRQEARGKRQEG
>NC_019780.1|WP_015228124.1|305320_305977_-|TetR/AcrR-family-transcriptional-regulator
MQAFRQQVANHSQKPPSEEKVRDRVLKTAQRLFANRGYDATTTKDLATQAGIAEGTLFRHFENKKAILVEVATAGWIEILTDLLTELSEMGSYKAVAQVMKRRMFRLHENGELLRVCFFEAQFHPELRERIQSEVISKMTNVTEAFFETAMERGIYRKMNPRVVAQVFLGMFTIAGFSSDTIVESDAPPHAMKEMAEGIADIFLNGVLAEPEEVNQDE
>NC_019780.1|WP_015228125.1|306240_307758_+|insulinase-family-protein
MLRLIITISCIFLLSGTAFIPSAKAVNNSSQIQPYLERVKERIIEYELDNGMKFIILPEKEAPVISFVTYADVGGANEEQRKTGAAHFLEHLAFKGTTEIGTTNYQQEKALLNRLDQVHNQLETAQEKGNSEAVKQLKTKFETLQKQASQYVKQNEYGKIVQTEGGVGLNAATSADYTVYFYSFPANKLELWMSLESERFLDPVFREFYKEQQVILEERRLRTDNSPVGKMIEEFLGTAFTTHPYQRPVIGYEADIRNLNRSDIREFFETYYVPENLTTAIVGDVDPEEVKALAEVYFGRFSRQETPPKVTEIEPSQTETREINLTLNSQPWYFEGYHRPAITDKDHVIYEVISTLLSNGRTSRLYRNLVEEKQVALSARGISSFPGNKFPNLVLFYALTAPNASLEQVSDALTLEIERLKNERVSDEELERVKTQIQASLLRNLDSNKGMARRLAEYEGKTGSWENLFTELEAVAAVTPDDIQRVARSTFTEENRTIGRILSEK
>NC_019780.1|WP_015228126.1|307778_309227_+|insulinase-family-protein
MNRIKWLGLVILVSLFVIIGNSDLLASAAEKEPKHYTELEFSSPPEVKLPDYQTLTLNNGIKIYLIEDHEFPLVSGTAIFRTGSRLESAEKVGLASLTGTVMRSGGTQQHPPDQLNQILEQRAASIETGIGTTSGNASFDCLTKDLDTVFNLFTEVIKTPAFAEDKFALAKQQVRGNIARRNDDPGDIADREFKKLIYGENSPYARKVEYNTLSNISRQDVIDFYQSYIRPEEMLLGIVGDFDAKMMRDRIENAFGNWQVSTPKPNYDLPPVEAKNTDGIYFVEQPQVSQSYVEIGHLGGQLDNPDYPALRVLNGSLNGFGGTLYNDLRSRQGLAYSVYGVWSSRYDYLGYFIAGGQTRSSATVPFIKSIAEEIKKVQENPLSDSQLQYAKSSILNSFIFNFQQPSQTLSRLMRYDYYDYPSDFIFEFQKGVKQTTKEDVQRVANTYLKPEKMVKLVVGNRDEINPDLSTLDEPITTVDISM
>NC_019780.1|WP_015228127.1|309311_310160_+|hypothetical-protein
MDELRTALELATEEELQQITEILFCRRFNPLDYFGTPEPTEIQSKEHDSWLDALEHRFRFLAADGFTVLRKRSQQLSYRQILIRVSNYLKLSYSNQLSTTDLEAEIFLHLMSRAWKELPEAEKASITAKVQNSLATAKAPAPLPPQIQHNPMNFLLKSGGVVAVSSVLRPWLLQQIARQFALHFARYQVAKNALIRGGTAAAAQIQGQLALRSAQHGMALSAARYGAVRTVFSFLGPILWGCLVADLGWKTIATNYGRIIPIVFTLAQIRLLREEDANWELA
>NC_019780.1|WP_015228128.1|310156_311464_+|O-antigen-ligase-family-protein
MSDWSEAKEKLWRWGQGMFLIFPLLPTWGSLGLFLIACVTLKQHGKAVLKRPLTWGLIGLTCWLLLTTFTAEYQQEAGLGLANFIPFFIVFLGISLLIETPHQLRRLAELGVITAIPVAILGLGQVIGNWTTPESLQPLLGWILAANGNPSGRLASVFMYANIAAAYLLVTFTFACGLWVEAYRQRREKLWRWFSLNVIVLIIALALILTSSRNAWGIAFLVGISFIIYLKWRWLLTLIGIMISAILGAAFAPSPFNLWLRQIVPRYFWARINDQMYTDRAVETLRSTQWEFTWNLIQENPFFGWGLRNFTPLYQEKMEIWLGHPHNLFLMLAAEIGILGMILLLILVGSAIVRASLILSIWSALTPTPKGKQWQQDQLIFLTLIIAFCALTLFNFLDVTLFDLRINLLAWLLLAAINGVGHYYRQLKLGLKLMD
>NC_019780.1|WP_015228129.1|311452_312112_-|response-regulator-transcription-factor
MQDKNRDQKPRQLLLVDDDPNLILLIQDYLEFQGYEVKSADNGQEVLDILEKYIPDLIICDIMMPDIDGYEMVERIREDSRISWIPVIFLSAKGQTTDRVKGLTKGADVYLVKPFEPEELVAQVESSLKQVNRFQERYESNVDLEEGAKIHVPNNVTLTRTETKVVQFVSEGLANREIAEKLNVSQRTVESHVSNMLNKTRLHNRTELARWAIQNHLVH

Crispr_ID: NC_019780_3

• CRISPR_ID: NC_019780_3
• CRISPR_location: 363831-363964
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT,csx21,PD-DExK,csx10gr5,cas3

Consensus repeat of NC_019780_3

Consensus_repeat	Method
AAGGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACCAATCAGCAAG	CRISPRCasFinder

spacers of NC_019780_3

>3.1|363881|34|NC_019780|CRISPRCasFinder
AGGCAAGAGGCAAGAGGCAAAAGGCAAGAGGCAA

CRISPR arrays and Neighbor proteins around NC_019780_3

CRISPR arrays

The CRISPR arrays of NC_019780_3

>merge|NC_019780|3|363831-363964|CRISPRCasFinder
AAGGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACCAATCAGCAAGAGGCAAGAGGCAAGAGGCAAAAGGCAAGAGGCAAAAGGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACCAATCAGCAAG

>NC_019780|3|3|363831-363964|CRISPRCasFinder
AAGGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACCAATCAGCAAG	AGGCAAGAGGCAAGAGGCAAAAGGCAAGAGGCAA
AAGGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACCAATCAGCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228144.1|347101_347497_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379154
NC_019780.1|WP_051017267.1|369195_371181_-|type-I-D-CRISPR-associated-helicase-Cas3'	cas3	cd09710_cas3_CAS-I-D	gnl|CDD|187841
NC_019780.1|WP_015228154.1|372590_373652_-|photosystem-II-D2-protein-(photosystem-q(a)-protein)	unknown	unknown	gnl|CDD|130222
NC_019780.1|WP_015228139.1|320103_328431_-|cadherin-domain-containing-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_041235628.1|371500_371791_-|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_019780.1|WP_051017263.1|364623_364935_-|hypothetical-protein	csx21	mkCas0116_csx21_CAS-III-A:CAS-III-D	unknown
NC_019780.1|WP_015228143.1|345090_347022_-|hypothetical-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015228148.1|361316_363716_-|hypothetical-protein	unknown	unknown	gnl|CDD|236892
NC_019780.1|WP_015228141.1|332967_342300_-|cadherin-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015228142.1|343177_344998_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015228155.1|373908_374244_+|YtxH-domain-containing-protein	unknown	unknown	gnl|CDD|227313
NC_019780.1|WP_156800604.1|364892_365276_-|hypothetical-protein	csx21	mkCas0076_csx21_CAS-III-A	unknown
NC_019780.1|WP_015228146.1|352871_360671_-|cadherin-domain-containing-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015228145.1|347808_352722_-|DUF4114-domain-containing-protein	unknown	unknown	gnl|CDD|380025
NC_019780.1|WP_015228140.1|328500_332871_-|hypothetical-protein	unknown	unknown	gnl|CDD|275057
NC_019780.1|WP_015228150.1|365754_366372_-|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	unknown
NC_019780.1|WP_015228152.1|371177_371504_-|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_019780.1|WP_156800605.1|366712_367594_-|hypothetical-protein	csx10gr5	cd09700_csx10gr5_CAS-III-D	gnl|CDD|131722
NC_019780.1|WP_041235258.1|360753_361173_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228149.1|364182_364617_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225064

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015228142.1|343177_344998_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	5.3e-51	167.9	0.0
NC_019780.1|WP_156800604.1|364892_365276_-|hypothetical-protein	csx21	mkCas0076_csx21_CAS-III-A	5.5e-31	102.4	0.2
NC_019780.1|WP_015228150.1|365754_366372_-|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	3.5e-62	204.3	2.9
NC_019780.1|WP_051017267.1|369195_371181_-|type-I-D-CRISPR-associated-helicase-Cas3'	cas3	cd09710_cas3_CAS-I-D	1.8e-96	317.9	5.2
NC_019780.1|WP_051017263.1|364623_364935_-|hypothetical-protein	csx21	mkCas0116_csx21_CAS-III-A:CAS-III-D	1.7e-27	91.0	6.3
NC_019780.1|WP_156800605.1|366712_367594_-|hypothetical-protein	csx10gr5	cd09700_csx10gr5_CAS-III-D	9.6e-69	227.3	0.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228144.1|347101_347497_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379154	pfam13384, HTH_23, Homeodomain-like domain.	6.24595e-07
NC_019780.1|WP_051017267.1|369195_371181_-|type-I-D-CRISPR-associated-helicase-Cas3'	gnl|CDD|187841	cd09710, Cas3_I-D, CRISPR/Cas system-associated protein Cas3; Distinct diverged subfamily of Cas3 helicase domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Diverged DNA helicase Cas3'; signature gene for Type I and subtype I-D.	7.29983e-95
NC_019780.1|WP_015228139.1|320103_328431_-|cadherin-domain-containing-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	6.53087e-13
NC_019780.1|WP_041235628.1|371500_371791_-|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	4.53118e-21
NC_019780.1|WP_015228143.1|345090_347022_-|hypothetical-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	1.34325e-06
NC_019780.1|WP_015228148.1|361316_363716_-|hypothetical-protein	gnl|CDD|236892	PRK11281, PRK11281, mechanosensitive channel MscK.	0.0012651
NC_019780.1|WP_015228141.1|332967_342300_-|cadherin-repeat-domain-containing-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	8.78671e-14
NC_019780.1|WP_015228142.1|343177_344998_+|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	8.4992e-133
NC_019780.1|WP_015228155.1|373908_374244_+|YtxH-domain-containing-protein	gnl|CDD|227313	COG4980, GvpP, Gas vesicle protein [General function prediction only].	1.97462e-20
NC_019780.1|WP_015228146.1|352871_360671_-|cadherin-domain-containing-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	1.79625e-11
NC_019780.1|WP_015228145.1|347808_352722_-|DUF4114-domain-containing-protein	gnl|CDD|380025	pfam17803, Cadherin_4, Bacterial cadherin-like domain. This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins.	1.05782e-12
NC_019780.1|WP_015228140.1|328500_332871_-|hypothetical-protein	gnl|CDD|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	3.12494e-16
NC_019780.1|WP_015228152.1|371177_371504_-|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	4.4091e-27
NC_019780.1|WP_015228149.1|364182_364617_+|GNAT-family-N-acetyltransferase	gnl|CDD|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	3.40765e-22
NC_019780.1|WP_015228154.1|372590_373652_-|photosystem-II-D2-protein-(photosystem-q(a)-protein)	gnl|CDD|130222	TIGR01152, Photosystem_II_D2_protein, Photosystem II, DII subunit (also called Q(A)). This model describes the Photosystem II, DII subunit (also called Q(A)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is in many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no high resolution X-ray structural data is presently available, recently a 3D structure of the supercomplex has been described by cryo-electron microscopy. Besides a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NC_019780.1|WP_156800605.1|366712_367594_-|hypothetical-protein	gnl|CDD|131722	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family. CRISPR is a widespread repeat family in prokaryotes. At least 45 different protein families occur in prokaryotes only when these repeats are present. This family, a minor CRISPR-associated protein family, seems largely restricted to the Cyanobacteria. It belongs to the RAMP superfamily (pfam03787).	7.24406e-70

Protein sequences

>NC_019780.1|WP_015228148.1|361316_363716_-|hypothetical-protein
MLEFPLGWLKSPHLKLWAKISLVWLAGNTIPFSIFPLSLAQAGEFPPDHRKEIAQNSQQETSSHSMIARLTDRELEQTILSLQLIQVLNLSPQPEAKVASLKENLTQLYNDRGASYQLSKTQTRQVQEIWSALSSQEITAINQLLLSQQSRQRTELTAQEIQGLLALLNNTPTPNLTAVQQEQLQLVVEFLEELPQAQPYQFSPEQTQAFQGAIALLFFPSMSESIAQASSAMSQSKETQNSSEQESPAASSVSVTKTELQQIILTLQGIQNLNLRSPSVTQPLLNQLLTLILEPRSQIELSPQQSAAITDLLNSLSSSETQQVNNYLDSIETEESTQAFYLGATAVQNTLQFLENLSPEQLNPSQKQARQELLTIFRNLAPEGKSAIALSQAQIEEINRLSAQLPENPSPSSITVEREQLEQSLAAVRRFPTEILSSEQQAARTQLQALLETITQRDGDQIVLYAPQVQEILALRAELPQPLPPGTQLVDREQVLNLLQGVDRESLSPEQIEQKQALETYFQTRQTLSENTTLAPAETERIEELRALIEPLDSSQFTELAGGIRTEQKGSLGAGISIETPNGFGGAPNSFSVGVLIQDRTRFTESTDGSLSGAVSLGNPKTAVGVTTSLAIFSLIDEGGSDAGFGDNGSLSFEINRNLSDFSSVGLGVENLITWGVNDAGTSTYLAFSQAFPLQEELNQPFGIAFVSAGLGNGRFRPEEDFDVDDDGTQFNFFSSAALQLIPRANVILEWSGQDLNLGLSVVPFANIPILITPSVVDLTGSAGDGARFTIGVSYGTFF
>NC_019780.1|WP_041235258.1|360753_361173_-|hypothetical-protein
MPILLGTTIALLATLGLTQEAKAQQQPVRSNIAPRPVRSNLVPTTNIRSNLLAPSVQDALNSLANDLDTTVDELLSNQQIAEIALSPSGAEVLNSLQEADGITGTEGNFTVDSNVPVATVETPQSVSVGTTLDILDSEE
>NC_019780.1|WP_015228146.1|352871_360671_-|cadherin-domain-containing-protein
MADITGDQSNNSLTGNEQENDIITGLQGDDTLIGLSGNDTLDGGEGNDTLDGGLGDDDLNGGNGDDIYQINRDLSGVNTINDVAGNDTLEIFDTEGTAFAVSLVAPTEGFIGIERDGANVLVDIGADGIADDLIVEDFFASANSNTPGAGFIETFGVTAARDVQDFLAVNQPPVAGIGNFEIREFAANGTQVGQLDISDPDGDELTVSLSDASQVRLINTFTGGTTEDPDVDGDGNAPFAIDNEGVITVNDTDDLGPLFDVIPFGNFFAFTRTVPSFDLTVEVSDGEATTIGAANIDVNFGRPAFGFGDPHVTTFDRNNFGFQVVGEFTLVESTDENNPLTIQARTAPAIQENGEPSDRLSNYTAIGTEIDGNTVAIYAGEDNPVFINGEAQVDIPVDGLEVGDDGGRIVNLGDGFFDISLGGEAQERIVVQVFENRIDPRFFLSEERNGNITGVMGNKDGDPSNDIVDSNGEVIAEATFDEINGEFADAFRITDGANSLLLRDGEDISTINDLDFPAEEVSLASLEEDLGTEAFNEILAQVEEAGAPEGFLKISAIIDLATTGDESFVGSALNVAGGNATPEVDNAVFNIEEDLADGEVVGTVSIRDGDDGLDNLEVIFSAGNEDVDGDGELPFAIDGQGQITINDSGDLVEAGEGEAFPLSVTATDPLGATGTGSVTVVENNPDVDQPPNVAANINDIRENSPEGTIVGRANAVDAEGDDFTFGLEGELDPDGDGTDAFTIAENGLITVADPGDLDFETTPSFEFDITATQTNDDTITGTATVTVNLIDNVAPEFDQDPFTFDTVDLDGQGDDDAQNGEEVGTVTATDANGDTLTFAITSGNDPDDDGTNAFAIDENGQITIVDTAELLGDSFEGELTVTVTDQEGADEATVVIPVNGPENDPPAAADDSNSTAEDTVLTVEAAGVLANDTDPEGEALEVSAVNGGEDNVGTEITLDSGALLTLNADGSYEYDPNGAFDELNDGETDTDTFTYTVSDGNSTDTADVEITVEGITPPSGTPVEVTANFLADNNGEPGDAIEDGTITQGDNFFVEILVAADTPVGVSSFSLNIDFDQAVLDAISDFEDPESIIIEKFDFDLGRTADLNEGTITLAGGTVDANTDDDGDGVPDNVIGANGNPERFALLEFNALEVTEDSTLDLEFPGIDADGNPLGGTLGDGTAIDSDEVNLSLQDASFVVDGGEENVAPEFDQDSFTFDTVDLDGAGDDDAENGDVVGTVTATDANEGDTLTFAITGGNDPDGDDVDAFAIDEASGEVTIVDTAELLGDGFNGELTVTVTDQDDASDEATVVIPVDGPENDPPAAADDSNSTAEDTVLTVEAAGVLANDTDPDGDNLAVSAVNGDEANVGTEITLESGALLTLNEDGSYEYDPNGAFDELNDGETDVDTFTYTVSDGNSTDTADVEITVEGITPPSGTPVEVTANFLADNNGEPGDAIEDGTITQGDNFFVEILVAADTPVGVSSFSLNIDFEQAVLDALSDFETPASIITNQFNFEESLVAELDGGTITLAGGTADATTDDDGDGVPDNVIGANGNPERFALLEFNALEVTEDSTLDLEFPGIDADGNPLGGTLGDGTAIDSDEVNLSLQDASFVVDGGEENVAPEFDQDSFTFDTVDLDGAGDDDAENGDVVGTVTATDANEGDTLTFAITGGNDPDEDDVDAFAIDEASGEVTIVDTAELLGDGFNGELTVTVTDQDDASDEATVVIPVDGPPENDPPAAADDSNSTAEDTVLTVEAAGVLANDTDPEGEALEVSAVNGGEDNVGTEITLDSGALLTLNADGSYEYDPNGAFDELNDGETDVDTFTYTVSDGNSTDTAAVEITIEGITNQPPVVGVGNFEIDEFDANGTQVGQLDISDPDGDELTVSLSEASQVRLINTFTGGTTEDPDVDGDDNAPFAIDNEGVITVNDTDDLGPLFNVIPFGNFFAFTRTVPSFDLTVEVSDGEATTIGAANIDVNFGRPAFGFGDPHVTTFDRNNFGFQVVGEFTLVESTTDENNPLNIQARTAPATQDDGETSDSLSNYTAIATEIDGNTVAIYAGEDNPVFINGEAQVDIPVDGLEVGDDGGRIVNLGNGFFNISLGGEAQERIVVQVFENRIDPRFFLSEERNGNITGVMGNKDGDPSNDIVNSNGEVIPEATFDEINGEFADAFRITDGANSLLLRDGEDIGAINDTDFPAEEVTLTSLEDDLGTDTFNDIVEQAEEAGVPEEGFLRTSAIIDFATTGDESFIGSALNVAGGNATPEVDNTVFNIEEDLGDGEVVGTVSIRDGDDGLDNLTVIFSAGNEDIDGDGELPFAIDGQGQITVNDSDDLVEAGEGEAFPLSVTATDPLGATGTGSVTVVENNPDVDQPPSVAANVNDIRENSAEGTIVGQAIAVDAEGDDFTFGLEGELNPNNNDTDAFTIDPENGLITVADPGDLDFETTPSFEFDITATQTNDDTITGTSTVTVNLIDVEPEPVGPIDFNLDVDGSGAANGSVDGLNILRVLFNLGPETMDVSQAPEEVGQQNIFDNIQEGIDNEALDVDGSGAANGSVDGLNILRVLFNLGPETMDVSQAPEGVGQQNIFDNVENLIPEA
>NC_019780.1|WP_015228145.1|347808_352722_-|DUF4114-domain-containing-protein
MPRHIVSAEDIFVTPGEVAPITLTYRTNPEEENANTFNFSVAIDSSDLNVEDTNPDLTGIQLPEGTFVTDFVFGDTDPAEGFQSISADNDENDIDNDPSTDVLVTLAYARPFDGDWPFAAEGVDGQPVTLGTLEFTTLDDFTGTRANIILRDPDSEFIQADVAPEDQLGLFNIPEERLDAVNIKAENDIPNHAIDAELDSAFEPGSNVDISLTYSSQDPVRANANTFNFDVAINSSVFTIEDTNPDLTGIQLPEGTFVTDFVFGDINAEDEGFQSISANFDTEDVDNDPRTDVIITLAYARPFDEDDRPFEGDWPFAAEGVTEDQTSVDLGSLRLPLSGDFNPETQATTVNVVLREPDSDFEGSQGDVLDQLTLPLDVVENEPPQIQTPGEQNIDENNTAVVTVEATDPDGDNLSFSLSGGADQGRFAIDADGNLSFAEAPNFENPQDDNGDNVYEVDVTVSDGNEQTEDVTQSFQVTVNDVNEAPVAEDDTATTDEDSVLEVGITPRQVVSAELLNDAVADDEANIALRYSTANPPQQNAQTFNFQVAVDSSQFVIEDTNTELSDIQLSDEIFVDAFEFGSLFGTVPSASEDTEDIDNNPDTDVVITFAYFRLDGDWPFGADDVAPDQEVVDLGTLSLPLSDGFDETTAQVTLREPDSNFEGNNGDILTTIALPSGDTESQLASNLLANDSDPDEGDTLTISAVNGDAANVGTEVELASGALLTVNDNGSYIFDPNGAFESLPVGQSEDVTFTYTVSDAEGLPDEATATITVEGRNDTPEFVAPDPFEFTVDEFVETPTDGGNGASDAPVQIEVNLLANENGTPGAELTPADIANGDSFFVEVVASADDPSGISSLSLELGFDSTVLSAVEEQFNDATNIIVDRFDFDLGRVADLENGTITLAGGTIDATTDDDGDGVPDNVIGANGNPEQFALLQFEAIADPTDTVIDLEFPGVDDNGNPLGGTLGDATALSDVELDVQDFTFSDTQEGDGTFVGIVEAVDPDEGDTVSLSLTGDVDDDLFTIDAETGELSFNEAPDFENPQDEDGNNIYEVEVTATDSEGEAVSDTLDVIVENVNEVPTAQDDTGSTDEDTVLTVEVAEGVLANDTDPDGDDLTVSAVNGGEDNVGTEITLDSGALLTLNADGSYEYDSNGVFDELNDGETATDTFTYTVADGNGGTDTAEVTITIDGITDNVPPNFVDTEIAVDENTTAVPLEVEDADGDEVTLSLAGGDDRSLFEIDPNTGDLRFITAPDFENPLDDDRDNLYEVEVTADDGNGGTTTELLEITVTDQEISGDPNEPNVVNIDPSEPLIHTLDTETGNSDGLVEVGLVLLQPGQTTEAALEAGANVRTVFSVFPDTFDNGEPGTFEDLGTIQRILSVVGSNRVGYVLNEGNDQTIDEILAQDTNNLAESFEFGNFNQSQQGNTLTLEAGGVTFEVSQTGEESPLGANLQAQGLEVFDLRENVDGTQLTENDAVDARLSFDLISVAAFDNAIGFYTVDGGNGAIDGVNPGDEGYLDALLSNVVTDDSNGEEEDIILRGGANVDETSAEDFEVQIQGGQIIVPFIIARGGNLDALPDGADELPLRSEIYTPFIGANSDGADHFRLLADNTFGIEDLRGGGDQDFNDIIFQFDFA
>NC_019780.1|WP_015228144.1|347101_347497_+|helix-turn-helix-domain-containing-protein
MFTQVRTLLREKKMAAPYQYELRMKAIEAIDQGQKKSEVARRFGISRNTIYLWLKRRETTGSIDPALHYQKGSNPKITDWEKFEAFLEKHQGKTEEEMAEAWEEPISRHTIHRSIEKLNYAKQFPHLVKKK
>NC_019780.1|WP_015228143.1|345090_347022_-|hypothetical-protein
MVSVSNITRLLPENSANNTSVFLEINDPLIPLADVNVVLEGNFDLDGDGINTFTDPIFNFAQQAWEIRVADRDLIDFETLDSFSLTVRASDGTSRDSGTLSIPLSDVNEAPILDDATFQALDATTIETGLISSVTASDPENNSLSYEIIDGNDPDANGRGAFRIDRGAITLVNPEELTQEYNLTVAVSDSAGLQDTATVTIPVFAAPFVESRELTLDENSAEGTVISLGSDLIQDANTNLADLRVTLTSGNQDSDGDGNFAFSSPIFNPDTEAWELIVNDTDELNFEENESFALELQASDGTRADVGFPTIALNDLNEAPVIRDQTFNELNGNNASEFQLVGNVDAFDPDSGQEPPNLAITGGNDPDGNDISAFRVEDGQIQVANPGELSQDFTLTITATDTEDSNLTDSAEITIPIVAAPIVASNTIELPENSENDTAIALDIRDANTPLGDLNVTLNSGNPDNDDDGIKAFSAPTFNEEAGQWELLVTDSDELNFEFEENNSFPLRIQASDGEQSDTSFPTIALTDVNEAPELTVPEFEQPIDANQIVEEFEQAQAQAEAAEEEIELPVVGAITEIKDPDFEQSVSTLAITGGNDPDGNETNAFIINEFNELVVINPQELTQDFTLSITATDDSEDALTSN
>NC_019780.1|WP_015228142.1|343177_344998_+|group-II-intron-reverse-transcriptase/maturase
MNTDNRCIKWGDIDWHKAERVVYKLQKRIYKASSRGDVKAVRRLQKLLVKSWSAKVLAVRRVTQDNQGKKTAGVDGVKSLSPVARMKLVNNLKLGSKVKPTRRVKIPKPNGEERPLGIPTMYDRALQALVKLALEPEWEAVFEPNSYGFRAGRSAHDAVTAIFDAIRYKPKYVLDADLAKCFDRINHERLLNKIKTFPTFRKQIRAWLKAGVMEGKEFSPTSEGTPQGGVISPLLANIALHGMENEIKAIAHTFDMKTNNGYQVSASNKRRSVCVIRYADDFVILHESLAVVQRCKEVVSNWLADMGLELKPSKTRIAHTLENYENEKAGFDFLGFNIRQHKVGKYTSGRDTKGRLLGFKTLITPSKESQKKHYRRIAEVIDKHKGQSQATLIANLNRVIRGWCNYFSIGVSSKVFSRLEHLTFWKLWKWGVKRHPNKGKKWVKTKYFRTIRGDKWTFATPREGSNPMVLMKHSQTAIVRHVKVKGDKSPYDGDLIYWSSRMGKHPEMPKRTASLLKKQKGKCAHCGLFFRDGDLLEVDHIAPRSKGGKDEYKNWQLLHRHCHDEKTRTDGSIHHHGTSVKGSNHHPVASIIPEDYQWENDMLVTY
>NC_019780.1|WP_015228141.1|332967_342300_-|cadherin-repeat-domain-containing-protein
MSVTLNGGNQDNDADGEFAFSNPSFNPDTGRWEILVNDSDDLTFARVNLEIQASDGENAGSGLTRITLVPDVIDNTVEDFEENSPEETAIPLEIEDSDTPLNELEVTLINGNQDIDGDRRSAFNQPTFNTEAGQWEVTVNDSDDLNFENLSPEQLENGEFHFSLEIEASDGEDSDTGEYDVRLADINEAPVFENSSQLLSVVDIDGIPNDDGNGAIVGQITGFTDPDGDVSDPEGQDFRFSINEVGGFNLDSATITATGEIFIGDRAQLGDNLEFEVTVIDSEGAESEPILIGIPADTAENDAPLVLDTTLERVNPSTAAIDNILGTVPSADPDGDPISFSIDGGNDSGAFAINENGEISLVVDPATLNQAEFTLTVTATDSVDSNLTDTAEVTIPVNTAPFLSSETVEIPENSGNDTVIALPLSDVDTPIGGLVSVTLRNNQDNDGDDLNAFSEPAFNEETGQWEITITDSDELNLDFETSEGLTVDISVSDGDITIPSSINVDLTDVNEAPTVEDATFDEVDPRSIATDDLVDGITVNDPEGEPVNLEITDGNDPDGNGIGAFAIDAEGNITIADLTELTELTTTNFTLTVTATDTVDETLPSDTATVTIPIAPVPIVDEPIPVVNNSFTEIAETSADGTPIPLEITDENTNLADLTVNILNGNPDNDGDGTNVFSEPVFNPDSGQLQITVTDSDELNAEGFPDRFSLEIEATDDLGADTATITVELDEAPTVDDAVLNSVDPADPENPIQAGDLVGTVDADDPEGDAFTLAITDGNDPDGDTINAFDIDPNSGTITIADPAELTQDFSILEVTATQDDDPSLTSTGQIIIPTPTNPLPVINDSQIDLPENSAVLPLDIQDGNNLADLTVTLLDGNQDNDSDETNVFGEPEFNDTDQQWELPITDSDEFDLENFPNSFNLEIEATDDLGADTATITVELDEAPTVDDAVLNSVDPTTALVGDTVGFVSDSDPEGDAFTLAITDGNNPDGDTINAFDIDPNSGTITIADPAELTQDFFILEVTATQDDNDSLTSTGQIIIPTPTNPLPVINDSPIDLPENSAVLPLDIQDGNNLADLTVTLLDGNQDNDSDETNVFGEPEFNDTDQQWELPITDSDELDLEDSLLPDNFNLEIEVIDPDPPAISADLATVSDFINVSLTNVNEAPVVEEEVLNTVDPDFAFVDQDVDTISVSDPDFNDSIASVEITSGNTDADGDGIDAFRIDEDFGNFELIVQDPDDLTEDFFTLEVTATDNEGLTGTGEVIVPTPINPFPVIDGSNIDLPENSSVLTLNIQDENTDLQELTVTLVDGNQDNDEDGTNVFGDTQFNSETGEWELLITDTDELDFEQFPNQEFNLEIEAIDPQGNSDSVSSTVSLVDVNEIQDSTLSVDAAVAEEEPLVGSLSISEPNDGLGVNNVTILDGNDPNGNGVDAFAVQQNGLGEFELIVQNPEELTQSSFTLEVEATGGGAITGTAEITIDVSSVRPVIESNPLKLLEDSVEGDTVALNIRDEDTNSENLIVTLVGGNQDLDEDGQFAFGEPIFNSEFGQWEVPVNDTDDLDFEADYNLDDGDPETGTFTLEVHVSDGATSAIAEPEIQLTDVNEAPILEPQTLELDVNAVTAEFEQNQENAEEEEEIVLPVVGTIEVEEPDGQNVSLAITGGNDPDGNDRSAFTITEDNFGELELQVQNPEELTQDFTLQVTATDDSDDALTTTTDLTIELTAIPTFEADDPIPLPENSPEGTVIPLDIQDANTPLEELTVTLEDGNQDNDGDGNFVFSNPSFNQETGQWELTVTDSDELDFEATESFDLEIEVRDQENGTTAFPTIAVEDINEAPQVEAQTIEVNANTAFQLQPLDRIETSEPDFGQSVETSAITGGNDPDGNEVNAFIINESNRLTVLNPDELTQDFTLTITATDNSAEQVTGTGEINVSVTAAPIVTNDPIPLPENSPEGTVIPLNINDLNTPNGDLTVNLNGGNQDLDGDGIFAFSNPSFNTDAGQWELTVTDPDELDFESDNNRFPLELQASDGEQANSGSPEIVLTDVNEAPVGNDITLPLLNTATIEAGEVIGNASITDPEGDLLEFAINSGDDNGAFTIDEAGDISIVDPSLISAPFQLEISATETETDEQNATTAVVTVPVDTPPAFVETEFTVPENSAIDFEVGQVVINEDEGLESLSLDSANFDGDENPALRIDEQGNVFVNDADDIDFEANSGLLLGELTATNVNGLTQSAILTVNVQDVNEIPTVEEALFSPIAVGESSIAQDDQVEIDPVISDDLTGVVSANDPDLGESPTLDIIAGNNDADGDGTEAVAIQSFADGGAEIIVTDPDDVRENFRLTVQVSDRGGDTNEATVVIPVNGEGNQAPIAENATLNIVENSSGGTVVGTFPHTDPDFNNLLSQEDLTFSINQGNTDVDGDGLSAFRIDRFSGEILVADRDDLNFESADNRSFELEVVVTDLEGATDTAEVTVNLEDVNEAPVINNRFLERVTLNPITNPTEAADGDIVGAIAASDPDGTALSYEILSGNDPEENLADAFAINSDGEVSIANIEEIPDSGFFPLTVAISDETGLTTETELVIPLGTQAPTIAADQSFTIPEDAAFETVVGTVSATEPDGEEISYFLASSQQEGLPAFEIDRATGEIVVTAPNALDFETQSTVELTVIARDPQQAIGVETVTVNLENVNEAPTFDENSTSFAIPASSQAGRGVGVVAAFDEDGDTVSYAIVGGNDDRDGDDTNPFTINAETGEVTVADADDLLTLEDNPFRLEVQARDGELNNTAEVDITALPAAPVIPNNGATFPINATSFAGALVDTVEAFDPDEGELSFAFSAGNEDRDGDENNPFRINTETGAIIVTDADDVADIEGNPFELSVLVTDEDGDTTTGNFTVTSGTGTVSTSDGISFSTPLPDQSEAELEQDLNDDGDTEDTVTPEPSNLVRPAIGSTEILSIENTGNAPLLISDVVVSEGLRDRVTTDFEALVEAATPVDDNGEALFDLPGVEIPVGANLELAVTYTPDAGGEVIDEAAGLTLFSNDPENGELNVALSGESTFNSDIDYNGSVGFPDVTLADSLFNTSSEELNPALNIDGEGGFGFSDLATLNQEFGASIA
>NC_019780.1|WP_015228140.1|328500_332871_-|hypothetical-protein
MTLDFKLDLAKNGTIALNSQPFLTQDLVTNDLLHHSLKQADELLSDFLNRPDWVQQMELPFGEAEEWGENLSAPLNLPRLSIVSATELQGALGAYAGETNQIFLSQELILANADHPEAVTAVLLEEIGHAIDAQINETDSPGDEGAIFASLMQGEDLNPETLAQLQAEDDSATLTIDGETVIVEQATVSIAPDESALRTAISSANAGDTITFNASGTITLTNGQLDIDKALTIDGDLDDDGTPDITIDAGGNSRVFNIDDRDFESAIDVTIDGLTISGGSASNGGGIRNNENLTLNNSTISSNSADSAGGIYNRGTASIINSTISSNSSNFGAGGIYNYGTASIINSTISGNISNNSSTFGAGGIYNQGTASIINSTISGNSAVTGGVKNGFNDTISISNSTISGNSGSKGGGIYNDGTANISNSIIVNSVGGDVRGRSLIIAEGVNLVEDGSISSALTLDPNLSPLQDNGGLTLTQIPLAGSPVIDLGDNRLIPTDEFDLDSDGDTTEAVPFDQTSNSRIANSSIDIGAVEFQGSGTAILTVPSLSANLIVDTSVDENDFDLSPGDISLREALAFTEEGGTISFAPNLAGQTITLNSNLIIDKSLTLEGLGEDQLTLDGGGFDRVLTVDDGDNSVSKTVAISGLTISGGTAQNGGGILNRENLTLTNSTLSGNSARTGGGIDNEGTASLINSIVTDNSASSRGGGIFSSENLTISNTIISGNSADSEGGGIFNSQSLTLGISTIINSSVSSNSANRGGGIVNGGTLDLNNSTVSNNSADEEGGGIYLSYGTASLTNSIISGNSGNRGGGIYNNRTFMLTNSTVSGNSANEEGGGIFGSLGSSSPSNSTIINSTINDNTATQGGGLYNSYSYNYFTNNLDIGTVTLTNSIIANSIGGDVTDQQDGVTTEGVNIIQDGSIPTSDSVLNADPLLEPLADNGGITLTHALLEDSPAIDAGDNNQIPPDTFDLDSDGDTSEPIPFDQRGDGFDRVFNGQVDIGAFELGDNEVPIANNDTASTDEETTLNVNAANGVLANDTDPDEGDTLSISAVNGDAANVGTEFELASGALLTVNVDGSYIFNPNSAFENLNDGETGEDIFTYTVSDGNGGTDTAEVTITINGITDNVNDDNVPPNFVDTQVTVDENTTAVALEVEDPDGDNVTLSLAGGADQGLFTVDVDGNLSFIEAPDFENPIDADEDNIYELEVTVADGNGGNTSQTLNIEVLDVSEETNEPPIITSDSLQTIEENAIAPLSLQADDPDGDEVTFSLTGGADQGLFTINPDTGELEFNNPPDFENPIDADEDNIYELEVTAADGNGGIITENFQIEVTDVDETIDWSLDIDGNGEISPLSDGIMTVRFLFGDAFSNDDLINGAIGAEASRSLPEIRDHLQIGVDEGFLDIDEDGEINPLSDGIIAVRFLFGDAFAGEALINGAISPDSSLSLEEIQANLADLTSI
>NC_019780.1|WP_015228139.1|320103_328431_-|cadherin-domain-containing-protein
MNFQIIQLATPNLTVEVDSNFDLALNYNTSPVDNTLTGIALRLHYDSSNLTFNETSNLFATDLFGEVNSFADEENFDNDSQTDRYLQFQYFNFNGNWPDQPLPLNLGNFNFTVENPFSDIDPNPIDLILENRSLTVEEEVSGVSFGTLNVLDPNQETVNFNVTSFDTASGYELDSDPLELTIEETFTFTVSDDRLEVVNGELKLKDDSSFDFETDGDSVNVTVTATGDTGITTESTFEITVTEIEVNETPQITISNQVEVSENTTQVTTVAAIDPDENDTLTFSLSEGADADFFTINEETGELSFINPPDFESPESASGDNSYEVTVAVRDTADNIDRQTLTVNVTDVNESPSLTSPTTVSIAENQTDVTTITAIDPDSNETLTFSLSGGADADLFTINEETGELNFIQPPDFQNPRSASGDNNYEVEVTVGDRAENTDTETLNINVTDQVEEVSLLLFENNNGEKGDRIFNNTVNPGQEFFAEFFIKDIREKINIDQLGINGLGLDIDFDEEQFELISPLDEAGQLIPETAITAQGFDFFQGGNYNPETGEIEGLSASSINLEGEDNPSQGNRGRFESFARLGLKATTTPDFSTETPPLTVAVNPTQEFSLEDGNEIQGGANVPIPFLTIAPEVEIDVRLFSSVDGEKGEAIASNVNPGERFFLEVLVKDNRENLPESEQGITGLGLDIGFNSEAFNLVSPLDDSGNLIPSDVIIPESFTNFVNGEFDVESGLIQGLSASSIVLDGDDGSAIGTEAFSSFALLEMEAKQTKTSLVDQLDLNLNSTQGLTLQDGKSESDINVGIEQEVITVAPPIEYEIVLFEDNNGEKGDLIAQNLNRVNPGETFFADVLVRDNRVNLPEENTGISALGIDFEYDPDQLELISPLNEAGELNPEAAIVPPSFTSFIGGTFDRENGLIEGLSASSIIPDSEDGSAIGVGEFSTYASLGFQATQELNLANETIDQNFQVTTNSTQGFALNDGKTEQDITLNDELEVTEIAAPVEVEIALFENNNGEVGDQITNNLITPEQNFFAEIRVRDNRTNLPTEDLGISALGVNLDFDSDVFSLIAPLNEDNTFQPAEAIIPESFTSFIQGNLDAENGLIESLSASSIRPGEENGDPIGVGEYETLARLQFQTENVFASNVTFDLEINPTQGFALADGKTNNNTISEVFDQTVNITSAIFEQDRFIFNPINLDGISEGEVIGEIGIIEESLEDAIELQIISGNDSNNNEIPAFTINSETGEISVANLEEITEITTLTINASDPSGLLDTTTVEIPLNNSPTFTSSDAIEVSENETSVVTLSATDPDGDTLSFSITGGVDAALFTLDDEGSLSFSNAPDFETPSDEDGNNVYQVTVTVDDGKGSTVEQDLTVNLTDVNEAPIIEDQSFSIPENSEGETVVGAIEASDPEGNSLSYSLEEEGFGINETGEIFVTGETDLDFETNPNRELTVTVSDGEFTPTATVTVNLTDVNEAPIIEDQSFSIPENSEGETVVGAIEASDPEGNSLSYSLEEEGFGINETGEIFVTGETDLDFETNPNRELTVTVSDGEFTPTATVTVNLTDVNEAPIIEDQSFSIPENSEGETVVGAIEASDPEGNSLSYSLEEEGFGINETGEIFVTGETDLDFETNPNRELTVTVSDGEFTPTATVTVNLTDVNEAPTFTSDNAIEVSENETSVVTLSATDPDGDALSFSITGGADEGLFILNDEGGLSFSNAPDFENPGDEDGDNAYQVTVTVDDGNGSTVEQDLTVTVTDVDEVNRPPIVRNRNFEINESVTNGTEVGQLPINDPDGDDLSVSLNTSSQVRLINLSNREEVTKNPDVDKDGNPPFTIDATGVITVNDTDDLGPLFESINSNSGDSILSRIVPSFELTVEVSDEEATTIGSSNIEMILNSASFGLGDPHVSSFDRNNFSFQVVGEFTVVESTDENNPLTIQVRTSPTIEEDGESSDSLSNYTAIATEVNGDTIALYAGEENPVFINGENVSDLNETPVTDLDNGLFQINLDEAGEERIVVQVFENRIDPRVFLSEERNGNIAGVFGDKDGNPNDDFTLRDGTILPNPTFDQINNQFAQSWRTTDPANSLLLREGENLAEINDTNFPAREITLEVLEEQLGTDRFNDIVQQVEAAGLTEGFLRTAAIIDFATTNDDSFITSALNVAANNGTPQVEDAIFSIEPNANAEDVVGELSIRDGDDQLNSLTLSILQGNDDLDQDEESPFAVSVVEVDGQFQPRLTVNDPDDLEPEMSLTVQATDPLGATDTGLITIVQNDPNTNQAPILRVTVSDVDENSPVGTNVGRAGSTDPEGESVTLSLNAVDDLDGDGEEAFQINPETGLITVADPDDLNFEAQDSLTFNVIATDDEENTTEEEVTVNVNDLQTEVDVTLNLLNSDGSAIEENRLVVGENFFVEILVSADDPSGISTFSANLDFDEQSLDVLTPQFDTPSDLINEKLGFAPARVATFSEGMITLSGGTTDAVTDADEDGVADNVIGANNTPERFAIVEMEAVATTEEGTLTLTVPGENEDGRSIGATLGNGTPLTNEDITLNLETETLTVEVDNNPPVLNDQSFSVNENSEEGTVIGTIDAEDADGDDLTFSFGDVLPTNVDQDGQLPFGLDENSGELTVADPDDLNLAIQDTFNFDVVATDSANAQATGTVTVNVNPPRFSLDVDNNGDANGSVDGLNLLRVLFNLNPETMDTSQTDLTQQQVFDNIQQGLEGDNPLLDVDNSDEANGSVDGLNLLRVLFNLNPETMDTSQTDLTQQQVFDNIQEVNL
>NC_019780.1|WP_015228149.1|364182_364617_+|GNAT-family-N-acetyltransferase
MNIFIASDFNNFARCMMIRTRVFVIEQNIAANLETDEFENTSTHYLVGNGEGFIATARSRFLEDKETAKIERVAVLKEARGKGVGRQLMDYILNDLYTSPHLKTIKLGSQKTAIGFYQKLGFQVIGEEYIDAGIPHHLMMKIVS
>NC_019780.1|WP_051017263.1|364623_364935_-|hypothetical-protein
MGYYKTSPQAEKEIKDKPQKSEHQAKIEKYSSSLEFKEGQVIEATVVGFSKGNKVTYEITANTQKLTQKEPKKFNLLSEGQKVKLQITRLEEGKIKKVKCVDP
>NC_019780.1|WP_156800604.1|364892_365276_-|hypothetical-protein
MIVLVHAIARDLSLSDTDPNEVKKILEYLRKFQSKNFFQYLKILAKNGDRVGHSKKTVAYYSAIETACKKHLQEYQDQPQLMLNILAQSIIKSRLGEAKRNPTPIISNYLNLILWAIIKHRHKPKKK
>NC_019780.1|WP_015228150.1|365754_366372_-|hypothetical-protein
MSFSQYKNFGKTVRDFQIIYTEANFVQEIPLIIPNYFREDLNLMQSEGIVDNSEAAICENLIYPILKEVWKQYRHHFLLWSHQSLNYDETLSGFPEYILAKRSPLGKVVFDQPYLMLVEAKQDKFNEGWAQCLAEMITAQRLNQDSKLIIYGIVSNGKIWQFAKLAETTFTKNQNFYSIQELDQLFAIINYIFKQCETQLENFVY
>NC_019780.1|WP_156800605.1|366712_367594_-|hypothetical-protein
MKVIVLTIKANSPLAMGRRKLGVVNEAEDYIPGSVIRGAIAQEILQQTGYQNQDLSQNGGDFKSLFLDESCAIFHNAYPSSENQISSVIPATAVSSKTDPGFKHKGNGVFDTLIDRFCAEYYQHPYDPNCPQDQGRVEPFSGFYTVENGNYQTHSISKRLLTRNGINRRRNVAEESILLGSARSRGLGKVTIKATVTEMISEVSSRLENFNQSLQMRWEKWGNLLGKTSDQLKQTYFTVNLEAEAILTNQWRKTTVLTPEMLQEEIEKKMKLCNFTRLTPVMIIDRAGIRHGD
>NC_019780.1|WP_051017267.1|369195_371181_-|type-I-D-CRISPR-associated-helicase-Cas3'
MTGDGKSLAAFLSTLQDEKNVIALYPTNELARDQESQIKNYINLFQPELEPRVNRLSSAELELYAEQEKLKKASAIESRSKNSDILITNPDLLHYLHRKAYLSPYDNPDKLWNRIDKNFDFFIFDEFHVFSAPQIASVINTMLLIRHTNRNKKFLFLSATPDEQLIEKLKKAQFTYQQIDPIQAKKYQFPTTKAESKKLQSQHWRQVSREISLEFIPLESAFSASETWLKENKELILDRFIIPPNPPLEGGNMISSNLSSKTGEMIPPNPPSERGGNMTSQRFCKTKGAVILNSIAAVKRLVPISQELFHPYGLTVGENTGLSGQQTKLASLETDLVFGTSTIDIGVDFKINFLIFESSDTGNFIQRLGRLGRHNSFQRNGETIPFDQFTAYALVPKFLVERLFETTSPPLQVNQRYDRPQFNEVIRENYRKINNFQGYIRFAQSMIKSRLGVAKRNPTPIINNYPNLILHTLSDGQLNLTYHSIAENRGVLTNVVNNAVMEAYTEAGYEPLLYLPTGVIYLCDRDTPPISPDSLPQRVVETITSLCRSQLQAKQTGFGRDGKGMKYAEYYDLFFDEKALMEVALSATLRILRDGKASSAKKRSDNLLSYQQEGILSSDYNFQFEDDIRIDQLAEFGEKPLIILKRLVSKIRRFRNRQTLI
>NC_019780.1|WP_015228152.1|371177_371504_-|DUF86-domain-containing-protein
MRDYTERLKDIQEAITDIEKYAVRGEKAFFENELIQVWIIHHLQIIGEASSTIPESFTRLHSEIPWQDMKDFRNLVVHEYFRVNLDTVWSITQEEIPDLKQKINQILL
>NC_019780.1|WP_041235628.1|371500_371791_-|nucleotidyltransferase-family-protein
MQIRELIQEKRDEIIQICEKHGGYNVRLFGSVARGEADEKSDIDLLVDLGKNFSPWFPVRLIRELEELLGHQVDVVTVTGLKERIKDRVLKEAIKL
>NC_019780.1|WP_015228154.1|372590_373652_-|photosystem-II-D2-protein-(photosystem-q(a)-protein)
MTIAVGRQQQQRGVFDLVDDWLKRDRFVFIGWSGLLLFPCAYMAIGGWLTGTTFVTSWYTHGLASSYLEGCNFLTVAVSTPADAFGHSLLFLWGPEANWDFVRWCQTGGLWSFVALHGAFALIGFMLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLLYPLGQSSWFFAPSFGVAGIFRFILFFQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFDEGGDSNNTFRAFEPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSSVGVVGLGLNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGLRAWMAPDDQPHQKFEFPEEVLPRGNAL
>NC_019780.1|WP_015228155.1|373908_374244_+|YtxH-domain-containing-protein
MSKGKVSAFLGGVAIGSAVGTVVGLLAAPRSGRETRKVIKKSAQALPEIAEDVSSSVQLQADRFSETTLSNWDETLNRLKSAIAAGIEASRIETANLEEKPESSSNHDYRS

Crispr_ID: NC_019780_4

• CRISPR_ID: NC_019780_4
• CRISPR_location: 554186-554309
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_4

Consensus_repeat	Method
ATCAGTGACCAGTGATCAGTGACCAGT	CRISPRCasFinder

spacers of NC_019780_4

>4.1|554213|22|NC_019780|CRISPRCasFinder
GATCAGTGACCAGTGATCAGTG
>4.2|554262|21|NC_019780|CRISPRCasFinder
TGGGTGGAGTTTACGAAACCC

CRISPR arrays and Neighbor proteins around NC_019780_4

CRISPR arrays

The CRISPR arrays of NC_019780_4

>merge|NC_019780|4|554186-554309|CRISPRCasFinder
GTGAGTACCCCTTAAACAGTGACCAGTGATCAGTGACCAGTGATCAGTGACCAGTGACCAGTGATCAGTTGTAGGTTGGGTGGAGTTTACGAAACCCAACATCAATCAGTGACCAGTGATCAGT

>NC_019780|4|4|554186-554309|CRISPRCasFinder
GTGAGTACCCCTTAAACAGTGACCAGT	GATCAGTGACCAGTGATCAGTG
ACCAGTGACCAGTGATCAGTTGTAGGT	TGGGTGGAGTTTACGAAACCC
AACATCAATCAGTGACCAGTGATCAGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_071880344.1|555456_555945_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228333.1|553352_553577_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228327.1|548173_549370_-|DNA-double-strand-break-repair-nuclease-NurA	unknown	unknown	gnl|CDD|214920
NC_019780.1|WP_015228326.1|547103_547907_+|hypothetical-protein	unknown	unknown	gnl|CDD|372807
NC_019780.1|WP_015228336.1|554826_555411_+|phycobiliprotein-lyase	unknown	unknown	gnl|CDD|312763
NC_019780.1|WP_015228328.1|549575_550364_-|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_019780.1|WP_156800859.1|556892_558767_+|BamA/TamA-family-outer-membrane-protein	unknown	unknown	gnl|CDD|130065
NC_019780.1|WP_041235647.1|561357_561558_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228338.1|556020_556764_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|181800
NC_019780.1|WP_015228343.1|561635_564887_+|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl|CDD|235393
NC_019780.1|WP_015228330.1|550827_551688_-|phycobilisome-Linker-polypeptide/CpcD/allophycocyanin-linker-domain-containing-protein	unknown	unknown	gnl|CDD|366093
NC_019780.1|WP_015228335.1|554375_554804_+|hypothetical-protein	unknown	unknown	gnl|CDD|379583
NC_019780.1|WP_156800860.1|561197_561395_+|hypothetical-protein	unknown	unknown	gnl|CDD|367913
NC_019780.1|WP_015228340.1|558846_559872_+|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NC_019780.1|WP_015228332.1|552423_552942_-|phycocyanin-subunit-beta	unknown	unknown	gnl|CDD|271301
NC_019780.1|WP_015228329.1|550487_550742_-|hypothetical-protein	unknown	unknown	gnl|CDD|366605
NC_019780.1|WP_015228341.1|559899_560778_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|130314
NC_019780.1|WP_156800623.1|543459_543915_-|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl|CDD|239550
NC_019780.1|WP_083874465.1|545883_546345_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|238126
NC_019780.1|WP_015228331.1|551837_552326_-|phycocyanin-subunit-alpha	unknown	unknown	gnl|CDD|271303

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228327.1|548173_549370_-|DNA-double-strand-break-repair-nuclease-NurA	gnl|CDD|214920	smart00933, NurA, NurA nuclease. This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.	2.54912e-45
NC_019780.1|WP_015228326.1|547103_547907_+|hypothetical-protein	gnl|CDD|372807	pfam13911, AhpC-TSA_2, AhpC/TSA antioxidant enzyme. This family contains proteins related to alkyl hydro-peroxide reductase (AhpC) and thiol specific antioxidant (TSA).	8.06373e-11
NC_019780.1|WP_015228336.1|554826_555411_+|phycobiliprotein-lyase	gnl|CDD|312763	pfam09367, CpeS, CpeS-like protein. This family, that includes CpeS proteins, is functionally uncharacterized.	7.65096e-93
NC_019780.1|WP_015228328.1|549575_550364_-|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	7.34445e-24
NC_019780.1|WP_156800859.1|556892_558767_+|BamA/TamA-family-outer-membrane-protein	gnl|CDD|130065	TIGR00992, chloroplast_import-associated_channel_homolog, chloroplast envelope protein translocase, IAP75 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the TOC IAP75 protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NC_019780.1|WP_015228338.1|556020_556764_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	5.96086e-136
NC_019780.1|WP_015228343.1|561635_564887_+|carbamoyl-phosphate-synthase-large-subunit	gnl|CDD|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NC_019780.1|WP_015228330.1|550827_551688_-|phycobilisome-Linker-polypeptide/CpcD/allophycocyanin-linker-domain-containing-protein	gnl|CDD|366093	pfam00427, PBS_linker_poly, Phycobilisome Linker polypeptide.	2.03942e-73
NC_019780.1|WP_015228335.1|554375_554804_+|hypothetical-protein	gnl|CDD|379583	pfam14362, DUF4407, Domain of unknown function (DUF4407). This family of proteins is found in bacteria. Proteins in this family are typically between 366 and 597 amino acids in length. There is a single completely conserved residue R that may be functionally important.	1.34892e-06
NC_019780.1|WP_156800860.1|561197_561395_+|hypothetical-protein	gnl|CDD|367913	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system. BrnT is a ribonuclease toxin of a type II toxin-antitoxin system that exhibits a RelE-like fold. The antitoxin that neutralizes this toxin is pfam14384. BrnT is found in bacteria, archaea, bacteriophage, and plasmids. BrnT-BrnA forms a 2:2 tetrameric complex and autoregulates its own expression, which is induced by a number of different environmental stresses. Expression of BrnT alone results in cessation of bacterial growth which can be rescued after subsequent expression of BrnA.	2.60141e-07
NC_019780.1|WP_015228340.1|558846_559872_+|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.54133e-108
NC_019780.1|WP_015228332.1|552423_552942_-|phycocyanin-subunit-beta	gnl|CDD|271301	cd14768, PC_PEC_beta, Beta subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	1.81064e-106
NC_019780.1|WP_015228329.1|550487_550742_-|hypothetical-protein	gnl|CDD|366605	pfam01383, CpcD, CpcD/allophycocyanin linker domain.	3.00012e-20
NC_019780.1|WP_015228341.1|559899_560778_+|ABC-transporter-permease	gnl|CDD|130314	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein. This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	4.30414e-26
NC_019780.1|WP_156800623.1|543459_543915_-|Rieske-2Fe-2S-domain-containing-protein	gnl|CDD|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	4.86328e-22
NC_019780.1|WP_083874465.1|545883_546345_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|238126	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.	9.91126e-15
NC_019780.1|WP_015228331.1|551837_552326_-|phycocyanin-subunit-alpha	gnl|CDD|271303	cd14770, PC-PEC_alpha, Alpha subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	5.07742e-109

Protein sequences

>NC_019780.1|WP_015228333.1|553352_553577_+|hypothetical-protein
MLDQQKRLCSPEEIEQAITELERYRERIVNDLFQSARRVDVPHKTAMANIGKNPEIMRIDAKIEALQAKQSQLR
>NC_019780.1|WP_015228332.1|552423_552942_-|phycocyanin-subunit-beta
MFDAFSRVVSQADSRGEFLSTEQLDALTQMVKEGNKRLDTVNRMTSNSASIVTNAARGLFADQPQLVQPGGNAYTNRRMAACLRDMEIILRYVTYATLAGDASVLEDRCLNGLRETYQALGVPGASVAAGVQKMKEEAVRLASDPNGITQGDCSQLMSEVASYFDRAAAAVA
>NC_019780.1|WP_015228331.1|551837_552326_-|phycocyanin-subunit-alpha
MKTPITEAIAAADSQGRFLGNTELQSANGRFERALASMEAARGLTQKSNDLINGAANAVYQKFPYTTQMQGPQYAHDQRGKDKCARDIGHYLRMVTYCLIAGGTGPMDEYLIAGLDEINRTFELSPSWYIEALKHIKANHGLNGQAANEANTYLDYAINALS
>NC_019780.1|WP_015228330.1|550827_551688_-|phycobilisome-Linker-polypeptide/CpcD/allophycocyanin-linker-domain-containing-protein
MKTLVASNLANAGRLGLESFSGDPVELRWNASEDDLQTVIRAAYRQVLGNDYVMESERLISAESLLRQGNLTVRGLVRAIAKSNLYKEKFFYPNSNQRFVELNFKHLLGRPPYDEEEWAYHTGLCEEKGVDAEIDSYLDSEEYVSKFGEDIVPYYTGFQVGLGARTTNFTRMFQLYRGYGSSDRAQAGGKEARLTWELGKNEASTIVEPSTSTEEGTSRTPQTAYGGVGNQSARMYRVEVSGQIGRKIRPVIRYSNNAYLVPYDQLSQRLQQIVRQGGKVVSVRPA
>NC_019780.1|WP_015228329.1|550487_550742_-|hypothetical-protein
MYGQTTVTTPSSAASRMYRIEVEGMRQSSESDKQSYAIRKSGSVFFTVPYSRMNEQMRRINRMGGKIVSIEPLNTEPETESSEN
>NC_019780.1|WP_015228328.1|549575_550364_-|HEAT-repeat-domain-containing-protein
MTIYDAERAIAHLNQTEDLSLRYYAAWWLGKFRVTDPKAIAALLTALEDEADRSPDGGYPLRRNAARALGKLGDKQAVSLLIENLNCSDYYVREASAQALEEIGDPKAIPPLRELLAGGVEAAQSVAGKPHLVQPYEAIIEALGTLGAMEVKAEIEPFLDHPVAKVQFATARALYQLTKDEKYGKQLIDGLRAEKLPLRRSALMDLGATDYLPAASAIAQSPTENSLKLIALKGILENHLKHPDQELSEDAVQLLTLMDSLL
>NC_019780.1|WP_015228327.1|548173_549370_-|DNA-double-strand-break-repair-nuclease-NurA
MLDITKLTGQLPAISEHLQQEARASNKRLNQAYDLLEETVSQQEELERKQQQWLDRAIFRAAIPVEPLDTCKEIPVPPYAHSVFATDGSQIAPSHHEIAYCYLINIGRVMLHYGQSLFPVLDSLPEVFYTQEDLYESRQWGIPTEEWLGHRRTVSEIEALAEMAYRWVKPPGAHSEPNLALVDGSLIYWFLDSLPTPARDRLLPSIFRAWEQLQEAKVPLIGYLSANRHTEAVRFLRYVACPYSVPDCQSHCGSQQGKQLPCQVCEPLRDTTLWQTLLSPGERSSLWRSQNPILELYPETFSIYFCYVNVGTEIARVEFPAWVAEDMDLLEQSLGILLAQVYKGYGYPVAIAESHNQAVVRSGDRAQFFALLEREMIKAGLQNVGVSYKESHKRGSIA
>NC_019780.1|WP_015228326.1|547103_547907_+|hypothetical-protein
METLNSKITSSLHPYQLFQTIPLQQVSDGKKRLILSNCETANYLLVIVMPQLGDFDSLEYVWWLQKSREQLETSEIVVRSIGIGNLAAGKRFCDYTGFPEKNLFVTPDATLHQKLGLYSGLSLNIPRLSAAQNAWINLLLMCAGIGSPGTLREVLRGYTGDRNAPQLIADEEVVKAPPLPALQGSSFNLAGGNGFQRPLELATLRLRNMGEVLSHWKTYVPDASYITQRGGTFLFNENRELVYEWRDRGILGFAEKMSNPLEFLNTF
>NC_019780.1|WP_083874465.1|545883_546345_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MQHQLELTEQQHEAVVSRLSQERPELFQTVANSDQAPTLISTPDKETYPSPATETKESVSAPAPKAAVSAKPVVVFQTSQEELIGEEGKSILELALESGIEIDYSCGLGACGTCQVKCLSGDYRYLQDPSYEPESGHLLTCIATPVGRVELDA
>NC_019780.1|WP_156800623.1|543459_543915_-|Rieske-2Fe-2S-domain-containing-protein
MEEMMRIKRRELVSWMSLGTAIATVIGFNQTRSLSSEKKTETKAKPESTLSEGFQAVGSLEQLEENGVLINENLRVVVLQGVLGDLIALEQTCPHQGCAVLPTEERKRLICPCHGSQFTIRGKLLRGPAKTDLETYEVKAEDKQVLVKLNH
>NC_019780.1|WP_015228335.1|554375_554804_+|hypothetical-protein
MATKRTKRAKGFGELENQNGNVENTEQVSQLEATIAEKDSQIAKLEKQLAQQEEIQQQYQHISLQNQQQEVYINELEEARSKHRQEINQLQAQLTAISSQTESETAAKDQQIKELKAQIQQLQSFANIGEKQINRWRSHSIK
>NC_019780.1|WP_015228336.1|554826_555411_+|phycobiliprotein-lyase
MDGLQFFQKSAGQWYSLRTTHHLPFRRAETGGSDITVKSLGAEDHRIAEICQMHSVDPSNAVGGAFVSWDGAMEWDKEGEDHSGTSVFSLVPDQENPQQGKLLRERGYAEVVPVMGEYHIDQEDALVLITEYDTMSINERFWFPHPSLRLRTSTVKRFGGLSTATFCAEIRVDNTDGATSETTDQDGVQSFWGW
>NC_019780.1|WP_071880344.1|555456_555945_+|hypothetical-protein
MRHLAFDPSLVELRVSQQWEEQICRTIGRKITSINENLVSLLDRCQNCFYPEQRLPIQIFATPFAPHLKIDALCNLEADPITILIDVGRIIQPHWLNAVAHEYAHAQIGIAGHHPAFCSILTHLCLGLALPPPPPQGLPESQLQNWPPCQPTPDPLQFWLKD
>NC_019780.1|WP_015228338.1|556020_556764_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MEQKLYEGKAKIIYPTDNPNILLTEFKDDATAFNAQKRGTIEQKGEINCKISSVLFQLLEKQGIATHYIDQPSAKQMRVKAVTILPLEVVVRNIAAGSLCRETGLEEGTNLPFPLVEFYYKKDELGDPLLTRDRILILNLATLNQLEQLQNKALAINTHLKTFFNDCKITLVDFKLEFGLDSEQNLLLADEISPDTCRLWDQSQSEESDDRVMDKDRFRKDLGNVENAYQEVQTRILSQFKLTINNE
>NC_019780.1|WP_156800859.1|556892_558767_+|BamA/TamA-family-outer-membrane-protein
MLAQTEGNTENLSQNNNFEPLPSQSPNNNAPAEEPQVLIVEVDVEGVEGELEDVVFEATDVQPGRLTTRSQLQEDVNAIFATGFFANVRVVPEDTPLGVRVTFVVEPNPVLEEVEVTTVPEGVEERVLPASVVDEIFREQYGEILNLQELQGNIDELNQWYQENGFDLAQVVGSPEVSSDGVVTLTVAEGVIEDIQVRIFDEEGEQIEGKTRDFIVTREVELSEGDVFKRQTARSDLERIFGLGIFEDASLSFTPGDDPRKVVLNFDVIEGNTGSIGAGAGVSSSSGLFGTISYQERNLGGNNQNLSTEVQVGGRTLLFNTRFVDPWIAGDPKRTSYAVNLFRRRSLSVIFDEGEEDVDLPNGDTPRVVRTGGGLTFSRPLAPDPFTRADWRVSAGLNYERVQIEDDDGEISPVDEFGNQLAFDESGKDDLFVLELDAVRDRRNRSSQTTSGSVLRLGVDQSIPVGSGNIFFNRIRGSYSYFIPVDFTSFSEEGGETLAFNLQAGTVLGDLPPYEAFTLGGSNSVRGYEQGDVGAGRSFVQATAEYRFPIFSIVGGALFVDVGTDLGTGDDVPGEPAEVRGKPGSGFGYGAGVRVQSPLGAIRVDFGLNDEGESRIHFGIGEKF
>NC_019780.1|WP_015228340.1|558846_559872_+|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein
MTPAVSIEHLQKSYGEVAAVKDVTFTVQPGEIFGLLGPNGAGKTTTIRCLCTLTKPDQGRVTVGGVSSIEQPKAARRKLGYVAQEVALDKVLTGEELLQLQASLYHIPRSIARERIPQLLKLLGLEDYAHKKTGTYSGGLKKRLDLAAGLLHQPDVLVLDEPTVGLDIESRFVVWDFLRKLREAGTTVLLTSHYLEEVDALADRVAIIDQGEVIASGTPNELKDRLGGDRVTLRIREFTPTAEAEKAKTHLSNLDFVREIIVNPAQGNSLNLVVEPNSNPIGSIEQTLSNLDLPTFGISQSRPSLDDVYLAATGRTLMDAEMAAASNRDLKAEKKQAMKGS
>NC_019780.1|WP_015228341.1|559899_560778_+|ABC-transporter-permease
MSDSMTPLSPNSIAIEQETSSENPVGEFFQETGALTKRLFIQLKRRPSTLVAGIIQPLMWLILFGALFQYAPEGLLGEGLSYGKFLAPGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLSSRYSIVAASTIYIISLSLLQTASIVALSAVIGAGLPSLAGLGAIALIVFLIVAGVTALSLGLAFALPGHIELIAVIFVTNLPLLFASTALAPLNFMADWLKVVASVNPLTYAIEPIRYIYLNGEWSLTSTVLETSWFNFSFGASILALVAFDLVILFLIQPLLRRRFA
>NC_019780.1|WP_156800860.1|561197_561395_+|hypothetical-protein
MIDVGFRVETFHGTSLHNLRLTDCCWVSYSPPNLRLTYRNDKIRIISARKASKNEKRIYYQSYLG
>NC_019780.1|WP_041235647.1|561357_561558_+|hypothetical-protein
MKNESITRVTWDKLDQMEDLTDWERVNNMTEEEIEQNALDDPDNPPLTDEELKYLKPLSNPPFRKT
>NC_019780.1|WP_015228343.1|561635_564887_+|carbamoyl-phosphate-synthase-large-subunit
MPRRTDLKKILVLGAGPIIIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPETTERTYIEPLTAEIVEKVIAKERPDALLPTMGGQTALNVAVELAQAGILERYQVELIGAKLPAITMAEDRQLFKEAMARINIPVCPSGIASNLKQARTIALEEIGSYPIIIRPAYTLGGSGGGIAYNQEEFEEKAQQGLDASPVSQILIERSLLGWKEYELEVMRDLADNVVIICSIENLDPMGVHTGDSITVAPAQTLTDKEYQRLRDYSKQIIREIGVETGGSNIQFAVNPVDGEVVVIEMNPRVSRSSALASKATGFPIAKFAAKLAVGYTLNEIPNDITKQTPASFEPTIDYVVTKIPRFTFEKFPGSKPNLSTQMKSVGEAMAIGRTFCESFQKALRSLETGRYGWGCDQKEKLPSVNQIRAQLRTATPDRIFTVRHAFQLGMTTEEIHQLTAIDPWFLNHLSSIIAGEKFLKATPLEAITAEQMREIKQLGFSDPQIAFATETTEAAVAKKRGDLNIFPVYKMVDTCAAEFEAFTPYYYSTYEEGESEVIPSEKPKVMILGGGPNRIGQGIEFDYCCCHASFSLSDAGYETIMVNSNPETVSTDYDTSDRLYFEPLTREDVFNIIAVERPQGIIIQFGGQTPLKLAVSLEEYLDQHQDTIPTKIWGTSPDSIDIAEDRERFEQILRQLVIDQPPNGLARSYEEALVIAGNIGYPVVVRPSYVLGGRAMEIVYSDQELEHYMSFAVQVEPEHPILIDKFLENAIEVDVDAIADQQGNVVIGGIMEHIEQAGIHSGDSACSLPYVSLSETVVNTIRKGTEQLAKALKVVGLMNIQFAVQGETVYILEANPRASRTVPFVSKATGVPLAKIASLVMSGQTLPELNFTQEPQPRHIAVKEAVLPFEKFPETDVILGPEMRSTGEVMGIDYDFGKAFAKAELAAGQRLPLSGTVFVSTNDRDKKAVIPVIKEFIALGFNIIATEGTKVALEAEGLTVGLLLKLHQGRPHVLDAIKNREIQLIINTPTGQEAQTDGQLIRRTALAYKIPMVTTIAGANANVQGIRSLQSGSLDVKALQDYQNPI

Crispr_ID: NC_019780_5

• CRISPR_ID: NC_019780_5
• CRISPR_location: 769321-769436
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_5

Consensus_repeat	Method
AACCCCCAATTCTGGGGGCAAAATTGAT	CRISPRCasFinder

spacers of NC_019780_5

>5.1|769349|60|NC_019780|CRISPRCasFinder
TTTTTTTTACGCCCCCAACCCCCAATTCTGGGGGCAAAATTGATTTTTTTTTACGCCCCC

CRISPR arrays and Neighbor proteins around NC_019780_5

CRISPR arrays

The CRISPR arrays of NC_019780_5

>merge|NC_019780|5|769321-769436|CRISPRCasFinder
AACCCCCAATTCTGGGGGCAAAATTGATTTTTTTTTACGCCCCCAACCCCCAATTCTGGGGGCAAAATTGATTTTTTTTTACGCCCCCAACCCCCAATTCTGGGGGCAAAATTGAT

>NC_019780|5|5|769321-769436|CRISPRCasFinder
AACCCCCAATTCTGGGGGCAAAATTGAT	TTTTTTTTACGCCCCCAACCCCCAATTCTGGGGGCAAAATTGATTTTTTTTTACGCCCCC
AACCCCCAATTCTGGGGGCAAAATTGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228534.1|773861_774137_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228532.1|772781_773696_-|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl|CDD|223131
NC_019780.1|WP_015228522.1|761882_762140_-|BrnA-antitoxin-family-protein	unknown	unknown	gnl|CDD|373040
NC_019780.1|WP_015228525.1|765580_766489_+|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NC_019780.1|WP_015228533.1|773685_773865_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228529.1|769686_769968_-|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl|CDD|234845
NC_019780.1|WP_015228537.1|775055_775442_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl|CDD|226180
NC_019780.1|WP_015228523.1|762400_764779_+|phosphoketolase-family-protein	unknown	unknown	gnl|CDD|235379
NC_019780.1|WP_015228535.1|774356_774629_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228526.1|766954_768379_-|2-succinylbenzoate--CoA-ligase	unknown	unknown	gnl|CDD|236019
NC_019780.1|WP_015228536.1|774625_774847_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228520.1|760946_761276_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228519.1|760644_760935_-|DUF4926-domain-containing-protein	unknown	unknown	gnl|CDD|379816
NC_019780.1|WP_015228531.1|770947_771334_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228521.1|761397_761889_+|DUF192-domain-containing-protein	unknown	unknown	gnl|CDD|376876
NC_019780.1|WP_015228530.1|770105_770711_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_019780.1|WP_156800641.1|774200_774344_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228524.1|765086_765521_+|DUF393-domain-containing-protein	unknown	unknown	gnl|CDD|367833
NC_019780.1|WP_015228527.1|768400_769303_-|o-succinylbenzoate-synthase	unknown	unknown	gnl|CDD|235061
NC_019780.1|WP_015228518.1|759822_760665_+|TdeIII-family-type-II-restriction-endonuclease	unknown	unknown	gnl|CDD|370545

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228532.1|772781_773696_-|cation-diffusion-facilitator-family-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.96855e-33
NC_019780.1|WP_015228522.1|761882_762140_-|BrnA-antitoxin-family-protein	gnl|CDD|373040	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system. BrnA is family of antitoxins that neutralizes the toxin BrnT, pfam04365. It consists of 3 alpha-helices and a C-terminal ribbon-helix-helix DNA binding domain. As in other toxin-antitoxin systems, BrnA negatively autoregulates the brnTA operon and has higher affinity for the DNA operator when complexed with BrnT. It dimerizes with two molecules of its toxin BrnT.	5.68709e-12
NC_019780.1|WP_015228525.1|765580_766489_+|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.25269e-13
NC_019780.1|WP_015228529.1|769686_769968_-|4a-hydroxytetrahydrobiopterin-dehydratase	gnl|CDD|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	4.04763e-38
NC_019780.1|WP_015228537.1|775055_775442_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl|CDD|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	6.95947e-42
NC_019780.1|WP_015228523.1|762400_764779_+|phosphoketolase-family-protein	gnl|CDD|235379	PRK05261, PRK05261, phosphoketolase.	0
NC_019780.1|WP_015228526.1|766954_768379_-|2-succinylbenzoate--CoA-ligase	gnl|CDD|236019	PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed.	0
NC_019780.1|WP_015228519.1|760644_760935_-|DUF4926-domain-containing-protein	gnl|CDD|379816	pfam16277, DUF4926, Domain of unknown function (DUF4926). This family consists of uncharacterized proteins around 70 residues in length and is mainly found in various Caulobacter, Microcystis and Cyanothece species. The function of this family is unknown.	6.12477e-11
NC_019780.1|WP_015228521.1|761397_761889_+|DUF192-domain-containing-protein	gnl|CDD|376876	pfam02643, DUF192, Uncharacterized ACR, COG1430. Two structures have been solved for members of this large (>500 members) family of bacterial proteins present mostly in environmental bacteria and metagenomes (distant homologs are also present in several Plasmodium species). TOPSAN analysis for Structure 3pjy shows that there is much similarity with the other solved structure, Structure 3m7a, solved for UniProt:Q2GA55 (Saro_0823), a homolog of Thermotoga maritima TM1668, UniProt:Q9X1Z6., The homolog in Caulobacter crescentus (CC1388), UniProt:Q9A8G6, is associated with CspD, a cold shock protein (CC1387), UniProt:Q9A8G7. However, the genomic context of UniProt:Q2GA55 is most conserved with a putative xylose isomerase, suggesting a possible role in extracellular sugar processing. Saro_0821, UniProt:Q2GA57, is annotated as an AMP-dependent synthetase and ligase. Structure 3m7a structure corresponds to the C-terminal (27-165) fragment of the YP_496102 (Saro_0823) protein and it is structurally unique, as the best hits from Dali have a Z-score of 3.8 (1nt0, 2j1t, 3kq4) and it is thus a likely candidate for a new fold. Interestingly, many of the top Dali hits are involved in sugar metabolism. There are no obvious active site-like cavities on the protein surface of 3m7a (http://www.topsan.org/Proteins/JCSG/).	1.04119e-47
NC_019780.1|WP_015228530.1|770105_770711_+|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.58615e-18
NC_019780.1|WP_015228524.1|765086_765521_+|DUF393-domain-containing-protein	gnl|CDD|367833	pfam04134, DUF393, Protein of unknown function, DUF393. Members of this family have two highly conserved cysteine residues near their N-terminus. The function of these proteins is unknown.	7.1332e-29
NC_019780.1|WP_015228527.1|768400_769303_-|o-succinylbenzoate-synthase	gnl|CDD|235061	PRK02714, PRK02714, o-succinylbenzoate synthase.	3.64363e-143
NC_019780.1|WP_015228518.1|759822_760665_+|TdeIII-family-type-II-restriction-endonuclease	gnl|CDD|370545	pfam09520, RE_TdeIII, Type II restriction endonuclease, TdeIII. This family includes many TdeIII restriction endonucleases that recognize and cleave at GGNCC sites. TdeIII cleave unmethylated double-stranded DNA.	5.86166e-62

Protein sequences

>NC_019780.1|WP_015228527.1|768400_769303_-|o-succinylbenzoate-synthase
MKYQLAITNYNYPFRQPLKTSHGEWKIREGIIISLKDAEGNISYGEIAPLPNFGSETLKQAQKFCSQYSQGITETEINQIPEQFPACQFAFESALAGFSAAKINEDHLQLSCLLPPGKDALKQWQIGWEKGHQTFKWKIGVFSLQEELSWFEQLLNLLPDSTQIRLDANAGLTLAEAKQWLTLADACGKVEFLEQPLPPQQFPMMLELATTFSTPLALDESVGTLRQLETCYENGWRGIFVVKCAIAGSPRYLQQLCEQYFLDLVFSSAMETSIGRQAALQLAMKLSSRRALGFGVDHWF
>NC_019780.1|WP_015228526.1|766954_768379_-|2-succinylbenzoate--CoA-ligase
MEYPRNWLWERFNLCNGEDAWLNLDIDRLRTHTALLYQKTQKNSILLLNVKSYYQFLGSFFVGVAKNCQIFLGNSQWKPQEWKQVLSIVKPDLIIHETDLEIISSSPSSLETETTIMIPTGGSSGNIRFVKHNWKTLSASVTGFSRHFETEKVNCFCLLPLYHVSGLMQLMRALLTGGNLIVYPYKTIETAWRNQDLATLENLETFPQQDYFISLVPTQLQRLINFGAGHWLSQFKCVLLGGAPAWESLLETGRKYNIPIALTYGMTETASQIVTLKPDDFLAGNNSVGKVLPHAKISIRGEAGERLTKGKVGRIAIESESLGLSYYPDSDWNREEFVTDDLGYFDEENYLYIVGRNSRKIITGGENVFPDEVEAMILSIGLVTDVYVIGLPDQNWGEVISAVYVPKEDSITSSEIETKLKQYLSPYKIPKQWLTVKALPRNEQGKVNHRLVLSLWNNSRLGGEDETQHQSPKL
>NC_019780.1|WP_015228525.1|765580_766489_+|DMT-family-transporter
MVQNNKLSLVFLVLFFGVVGVSTAAIFIRLCLQVADESGLGFSLLIATFRLTIAALVLLPFVRIPSQFPVSKKGYICAIVAGITLSFHFATWITSLSFTSIAASTTIVTSNPIWVTILSWLWLKEKPKPLTILGIAIALIGGFFIAIGDAGSLSGGSNPLLGDGLALLGAFSVSLYFLLGKQAQNEGLSIGNYSAIAYTTAALFLMPLPFLFGINYWGYPSEIYLYLLGMAFFSQVLGHTSFNWAMRFISPTFVTLAILFEPVSASILGFFVFGEVPSVLVLIGAIILLLGSSIAIWGGQKN
>NC_019780.1|WP_015228524.1|765086_765521_+|DUF393-domain-containing-protein
MSQNNQVNWQIKLLYDGECPLCVREVNFLQKRDAGRGLVKFVDIASDDYDPRNNGGVDFETAMGRIHGVLPDGTVVKNVEVFRRVYETLGMGWVYSITQLPLLGKIADVIYGIWADYRLTLTGRPNLKTIVEEKRRCSKEVCDR
>NC_019780.1|WP_015228523.1|762400_764779_+|phosphoketolase-family-protein
MTVATIAQNKPLSEEQLEKMHAYWRATNYLSVGQIYLYDNPLLKEPLKQEHIKPRLLGHWGTTPGLNFIYVHLNRVIKQQDLNVIYLAGPGHGGPGLVANTYLEGTYTEYYPDISQDERGMKKLFTQFSFPGGVPSHVAPETPGSIHEGGELGYALAHAYGAVFDNPDLIAACVVGDGEAETGPLATSWHSNKFLNPVRDGAVLPILHLNGYKIANPTVLARLGDKELENLFIGYGYKPYFVDGSDPEAMHQLMAGTLDTILGEIKSIQSEARTNGFTKRPQWPMIILRTPKGWTGPKEVDGKKTEDYWRSHQVPFSDTQTNPEHIALLEEWMKSYKPQELFDENGTFRQDLAELAPKGERRMGANPHANGGILLKALKMPDFQDYAVEVSKPATTYAQATRISGEFLRDVMKMNPQTFRVMGPDETASNRLSALFEVTDRAWMAERLPEDENLSPDGRVMEVLSEHLCQGWLEGYLLTGRHGFFSCYEAFIHIIDSMFNQHAKWLKTTRDEIPWRQPIASLNYLLTSHVWRQDHNGFSHQDPGFIDHVVNKKADVVRIYLPPDANTLLSVTDHCLRSRNYVNVIVAGKQPELQYLDMDAAIKHCTAGIGIWEWASNDKGGEPDVVMACAGDTPTLETLAAVDILRQKFPDLKVRVVNVVDLMTLQPETEHPHGLSDREFNTIFTTDKPVVFAYHGYPWLIHRLTYRRTNHQNLHVRGYKEEGTTTTPFDMVVRNDLDRFHLVQDVIDRVPKLGYAAAYAKQELRDQLIEHHQYVTKYGIDLPEIRNWKWPY
>NC_019780.1|WP_015228522.1|761882_762140_-|BrnA-antitoxin-family-protein
MEAKYDFSHGKRGAIDPTPSGKTRITIRLDDDVLAWFRQSVHLAGGGNYQTLINEALRQYIQEQNPESLEDTLRRVVREELDRAH
>NC_019780.1|WP_015228521.1|761397_761889_+|DUF192-domain-containing-protein
MLRLSWLSLFCCILLISCAPSDPSVAESETTLTESLGQELPITAIAQMGGKTIKLEVAKTPEQQAIGLMYREELPADQGMLFPMNPPREPRFWMKNVEIPLDMIFVREGKIRAIAHDVPPCEEDPCLTYSPEVIIDQVIELRGGQAKALGLEIGDSIEIKSVQ
>NC_019780.1|WP_015228520.1|760946_761276_-|hypothetical-protein
MTYFSPNVIIAKAKLTQYLLVPLPKDDKSKYLAKGGYSLDNWQQLETDIREQILSQEATLIETTRFGQKYEIRGNLIGPNGVTLPVLTVWMTTPKETKFVTLVPDQKRL
>NC_019780.1|WP_015228519.1|760644_760935_-|DUF4926-domain-containing-protein
MTFPLFTQVALKEDIVKYNLQKGDVATIVEHYPTPEGEEDGYSLEGFNLSQITLEVTESQIEPISKNENKSQRKLSQKKRHFSLFRGYRKLGRMKS
>NC_019780.1|WP_015228518.1|759822_760665_+|TdeIII-family-type-II-restriction-endonuclease
MRQISQETYQAIKNFLDQFLEELVQEYKARKLKEFETAKEYLTRSSSQGRLKPFQSAMIPIELLLINEFERGLSTRLGNTFEECARLLALDYHKTAIRQYNLTTQVSRSAYAEAEKQKEYYEHLVTNKSEKISFNQMAKRVVDAGKKNDLETVTLRVDLYVISQDGKEYFFEMKAPKPNKGQCLEVTQRLLRIHAIKQKLPPQINSYYAMSYNPYGSSREDYKWSYARNYMPFDDMVLIGEEFWNLIGGESAFEQLLNIYREVGEEKRKYLIEALAFHSP
>NC_019780.1|WP_015228529.1|769686_769968_-|4a-hydroxytetrahydrobiopterin-dehydratase
MAQLLSENDIQTQLNELSDWTQEGKFIKCTRKFKGFPEAVEFVNKLVEPAENAGHHPDLEISYNTVIIKMTSHDAGGLTEKDFNLARTISAIN
>NC_019780.1|WP_015228530.1|770105_770711_+|tetratricopeptide-repeat-protein
MFYLLRFPVLVAGLVFMTLTGCDQQISSSSPEKVKEAETLSPEKEKEVKTLMTQGNQNVASGNYESAIEAFDQVLAIDKNHVQALTQRGVARSRSEDYSGALADYNRALAVDSEAYEVYYNRGIVQARLEDHESAIEDFTKAIERKPDFAPAIGNRGFAHAELENYIAAIEDLETAAELFKESGNKRTSYRLRRAAHYIQP
>NC_019780.1|WP_015228531.1|770947_771334_+|hypothetical-protein
MARRKKKFPCGHQGYGQICHRCEQKETDRIRRKNQRQAWEESFRNDPIDLTTLPKNVVVKARRIISQLRQDSNYRRFKGKRLRHNRFIISIPVNRDYRLICRDQGSQVIPEAVVSHQDYNVCKPGSAK
>NC_019780.1|WP_015228532.1|772781_773696_-|cation-diffusion-facilitator-family-transporter
MTSESSKTSIYAALAANIGIGIAKFVGAAISGSSAMLSEGIHSVVDSTNEVLLLYGLKRSKMAADEQHPLGYSQEIYFWSLLVAVLIFALGGGVSIYEGINSFQHSQASRSPMVSYIVLGVAALFEGTALYVSIREFNQNYPRKNIGLWKAIRQSKDPSSFIVIVEDFAALVGLGLALAGVFLSEITQNPIYDGVASISIGIILTIVAILLVVETKELLLGESASPEIRESIKTIVQSDQAVSKMEAPITFHLGPTDILLALNIEFKDELSSDEIEAATRRIEQKIRESHQEIKRIFVEAASVI
>NC_019780.1|WP_015228533.1|773685_773865_-|hypothetical-protein
MIYGVVNLRREATLPLVVRNSSLGRGGRRDRCLVPEPVEGFSPILLNLLILILLKFYDI
>NC_019780.1|WP_015228534.1|773861_774137_-|hypothetical-protein
MSVRQRRYSKKELANRGQELYENGIRQQVEPGNEGKIVAIDIETGEFEVAETVMAATAQLYQRHPDAQPWGIRIGPRAVYHFGARSLQKNQ
>NC_019780.1|WP_156800641.1|774200_774344_+|hypothetical-protein
MQQDKGTTPRDRASSSSHKHAIALPYPSPNSDRLHSLHISYYLSARF
>NC_019780.1|WP_015228535.1|774356_774629_-|hypothetical-protein
MKSELTNDFVQRFAQLPERVKKTARKNYKLWKENPTHPSLEFKKLNTQEPLYSIRVGIGWRAVGVLKTSDTIVWFWIGSHSEYDKLLKNL
>NC_019780.1|WP_015228536.1|774625_774847_-|hypothetical-protein
MTNLLTEAFNKAQNLPEHLQDELAKQMIEDIKSELQWQKTLSQRQSSSLDELARQALNDSFEGKTKEMGFDEL
>NC_019780.1|WP_015228537.1|775055_775442_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MIRYLTLIEVLELHRKILEQSGGTLGIRDLGLLESAIAQPRMTFGGEDLYPNLLEKSVALGFSIIMNHPFVDGNKRTGHAATETFLVLNGLEINGSVDEQERMVLAIASGKLEREVFVEWLQQNTTAI

Crispr_ID: NC_019780_6

• CRISPR_ID: NC_019780_6
• CRISPR_location: 864012-864082
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: c2c9_V-U4

Consensus repeat of NC_019780_6

Consensus_repeat	Method
TGGGTTACGTTTTCACTCCACCCAA	CRISPRCasFinder

spacers of NC_019780_6

>6.1|864037|21|NC_019780|CRISPRCasFinder
CCTACTTAATAAGGTTGATGT

CRISPR arrays and Neighbor proteins around NC_019780_6

CRISPR arrays

The CRISPR arrays of NC_019780_6

>merge|NC_019780|6|864012-864082|CRISPRCasFinder
TGGGTTACGTTTTCACTCCACCCAACCTACTTAATAAGGTTGATGTTGGGTTACGTTTTCACTCCACCCAA

>NC_019780|6|6|864012-864082|CRISPRCasFinder
TGGGTTACGTTTTCACTCCACCCAA	CCTACTTAATAAGGTTGATGT
TGGGTTACGTTTTCACTCCACCCAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235321.1|851860_852073_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015228621.1|873169_873526_-|hypothetical-protein	unknown	unknown	gnl|CDD|224583
NC_019780.1|WP_015228617.1|868172_869270_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	gnl|CDD|223747
NC_019780.1|WP_041235322.1|852104_852320_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_041235319.1|850435_850717_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228609.1|849609_850446_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015228616.1|866759_867998_-|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl|CDD|181053
NC_019780.1|WP_015228620.1|872702_873173_-|hypothetical-protein	unknown	unknown	gnl|CDD|225229
NC_019780.1|WP_015228608.1|848527_849073_-|redoxin-domain-containing-protein	unknown	unknown	gnl|CDD|376354
NC_019780.1|WP_015228618.1|869397_870522_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl|CDD|180968
NC_019780.1|WP_015228611.1|852825_862512_+|tandem-95-repeat-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015228612.1|863381_863933_-|J-domain-containing-protein	unknown	unknown	gnl|CDD|197617
NC_019780.1|WP_015228614.1|864642_864963_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_019780.1|WP_156800647.1|870649_870865_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228619.1|871234_872527_+|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179486
NC_019780.1|WP_041235320.1|851626_851815_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228613.1|864253_864646_-|HEPN-domain-containing-protein	unknown	unknown	gnl|CDD|224807
NC_019780.1|WP_015228610.1|850747_851581_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015228607.1|847042_848296_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	unknown	unknown	gnl|CDD|381171
NC_019780.1|WP_015228615.1|865301_866699_+|acetamidase/formamidase	unknown	unknown	gnl|CDD|225279

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015228617.1|868172_869270_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c9_V-U4	-	8.9e-97	319.5	1.7

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_041235321.1|851860_852073_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	4.17534e-07
NC_019780.1|WP_015228621.1|873169_873526_-|hypothetical-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.63229e-10
NC_019780.1|WP_015228617.1|868172_869270_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.08062e-46
NC_019780.1|WP_041235322.1|852104_852320_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	0.000189041
NC_019780.1|WP_015228609.1|849609_850446_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	2.91364e-05
NC_019780.1|WP_015228616.1|866759_867998_-|LL-diaminopimelate-aminotransferase	gnl|CDD|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
NC_019780.1|WP_015228620.1|872702_873173_-|hypothetical-protein	gnl|CDD|225229	COG2354, COG2354, Uncharacterized protein conserved in bacteria [Function unknown].	0.00455869
NC_019780.1|WP_015228608.1|848527_849073_-|redoxin-domain-containing-protein	gnl|CDD|376354	pfam00578, AhpC-TSA, AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).	2.51541e-26
NC_019780.1|WP_015228618.1|869397_870522_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl|CDD|180968	PRK07413, PRK07413, cob(I)yrinic acid a,c-diamide adenosyltransferase.	0
NC_019780.1|WP_015228611.1|852825_862512_+|tandem-95-repeat-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	8.38653e-13
NC_019780.1|WP_015228612.1|863381_863933_-|J-domain-containing-protein	gnl|CDD|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	1.39565e-07
NC_019780.1|WP_015228614.1|864642_864963_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	4.78053e-16
NC_019780.1|WP_015228619.1|871234_872527_+|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NC_019780.1|WP_015228613.1|864253_864646_-|HEPN-domain-containing-protein	gnl|CDD|224807	COG1895, COG1895, Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN [Function unknown].	1.75733e-18
NC_019780.1|WP_015228610.1|850747_851581_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	0.000200465
NC_019780.1|WP_015228607.1|847042_848296_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	gnl|CDD|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	4.87648e-69
NC_019780.1|WP_015228615.1|865301_866699_+|acetamidase/formamidase	gnl|CDD|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	2.93407e-58

Protein sequences

>NC_019780.1|WP_015228612.1|863381_863933_-|J-domain-containing-protein
MATATLTPEVKQEINRLSQEKLIDHEVLEEFAEFVIKINHKSASKVKNKLNISDLKEAVYQRFKVKNTKELKQSNHFQMATDGMEKLDFRLKVTWEKLYRKFIGILPNEMNQEGYGCINGINVFQYFKPWQVFNLDPKTATKNEIKKAYYQLSKVYHPDNQKTGNREIFEQIELMYKSIIAGV
>NC_019780.1|WP_015228611.1|852825_862512_+|tandem-95-repeat-protein
MAFQPNSEAVAMEEALLEGAVINVGALLTKFASSDHFHSILETSFGDNSDTRLIEELQQALYTGAFFDGIEIEVLPSAELEGALGAYAEATNTIYLSQDLLVSSTQQASAVLLEEVGHAIDAYLNVEDSAGDEGAIFSALVRDVSLSPLEWQQLKAEDDTATLTINGEAVTVEQADVSYIGGDGDWYDPANWSNGTVPGTNDDVTITSNNTDITITFSQGNPSVNSLSLFAENGGNLALSGLTSYEGADFDTSIRATGGSSIDLSSITTLSGGTGYKDQLFIEAINGTVNLSNLTDITGGATRVLADGTNSNIDLSSLNRFADDNGYTYSQVNALNGGTIQTPNLDSLNGVSLLFNSSGNFDAEQITSVTNGSITVEGTAANLSSLTNVSGSSVTLSNGGTADFSNVSNIDTASLFVNDGVSLELPQVTSYEGTNFDTSIRATGGSNIDLSSITTLSGGTEYKDELFIEAINGTINLSNLTDITGGATRVLADGTNSNIDLSSLNRFADDNGYTYSQVNALNGGTIQTPNLDSLNGVSLLFNSSGNFDAEQITSVTNGSITVEGTAANLSSLTNVSGSSVTLSNGGTADFSNVSNIDTASLFVNDGVSLELPQVTSYEGTNSDTSIQATGGSSIDLSSITTLSGGTGYKDQLFIEAINGTVNLSNLTDITGGATRVLADGTNSNIDLSSLNRFADDNGYTYSQVNALNGGTIDLDQLSDISGEVLPITADGTNSIIDLFQISESNSSINPTEENGGDIIFLENEVPTFTSPDAIEISENETDVVTLSATDPDGDTLSFSITGGVDEDLFTLDDEGGLSFSNAPDFENPSDEDGNNVYQVTVTVDDGKDITVEQDLTVTVTDVNEAPTFTSENAIEISENETDVVTLSATDPDGDTLSFSITGGVDEDLFTLDDEGSLSFSNAPDFENPSDEDGNNVYQVTVTVADGKGSTVEQDLTVTVTDVNEAPTFTSENAIEISENETDVVTLTATDPDGDTLSFSITGGVDEDLFTLDEGSLSFSNAPDFENPSDEDGNNVYQVTVTVADGKGSTVEQDLTVTVTDVNEAPTFTSENAIEISENETDVVTLSATDPDGDTLSFSITGGADEGLFTLDDEGSLSFSNAPDFETPSDEDGNNVYQVTVTVADGKGSTVEQDLTVTVTDVNEAPIIEDQSFSIPENSEGETVVGAIEASDPEGNSLSYSLEEEGFGINETGEIFVTGETDLDFETNPNRELTVTVSDGEFTPTATVTVNLTDVNEAPTFTSENAIEVSENETSVVTLSATDPDGDTLSFSITGGADAALFTLDEDENLTFNQSPDFENPQDSNSDNIYQVQVSADDGNGGNSSQSINLEVLDVNESPEITSDSLPTIEENTIAPLSLQADDPDGDEVTFSLTGGADQGLFTINPDTGELEFNNPPDFENPIDADEDNIYVLEVTATDSEGANVSETLEVIVENVNEVPTAEDDTGSTDEDSSFTVDAANGVLANDVDPDGDALTVRAVNGEAGKVDTEITLDSGALLTLNADGSYEYDTNGAFEDLNDGETATDTFTYTVADGNGGTATAEIRITINGSTGNQAPVVEIPINDINLSQGEIPDPINLFDLFEDNEDTDEELTYSITEQTNADLIQAAINEGEGELSFVIFSGSGSSNITIQATDTDGLSVSETFTVTVNARNTAPEITNPLNDLSIDAGSDPVPINLFETFEDTQDADSDLKFRASSSNKSLVNADSINTSSGELFLQFPSTRTGSSEITVSAVDTSGFTTTETFTVTVNPSGEVISLEETNDTLETASTPQLSPDTPNINLAGEIGDNNFGDQDIDLYRLELQKGDQLTADINTDDNSSLDSFLRLFDSFGQEVERNDDSQQGENDSLLEFSADTSQTYYIGVSGFGNDQYNPNLENSGSKGDTGSYNLALTLTSTASETPNDTISQAIATSALIQENGQFQQPGFLGDNSTLNNPNLDVDFYEIQLTQGETATIDIDTTENSPLNPILRIFNATGGNVPNGFNDNAKAPGEQLGNDPYLEFSAPFSGTYYVGVSDQANDLYSPYNPESGQSPGATGAYEINITQDVSREDSPPEASPNDTLDTATALLVGDEIQGNIGDRTEFVTVPGLDVDLYTLTLEADQAIRINLNRTSRLDPVLRLFNAQGEEIAFNDDIGSSDNALLELTIPETGDYYIGVSGFGNENYDVTTAGSGKSFASTGSYQLIISDQQPEILEAGEEEENDTLDTATATSLTADSLGSLKQTNAIGNNPNLEEAGLDVDIFQVELDTNTRLTAEINTENFNSEFDSLLRVFNSEGEQLDFNDDESSENLDSQLEFIPTAPGTYYVGVSGLGNENYNPNTVSSGNAGSIGDYEIELRLNEVTPQENPTNETPETASQVNLTNNRFSTNGVIGDNTNVEVDRDFYEIDLEQGNILNIRVNGDNLESFVRLFNSKDEEIPLEYEAGDFPHPSLNLTIPEDDTYFLQISAFDNNEDGIPDDSIGDYRLNLAVAPPPLAAQPPVEEIRPTANNDRFRAASQRTAIFNVLGNDSANDDQGFLEITDFTATTEKGGTVELDNQSRLRYTPNPDFGGVDTFTYTVANESGGFDQGTVEVNVNRPPEGASVQVELDVRSVPGKEDQLNDGLQIGEEFIVDVRFLDRTAANNPSQAVLSGYADLLFNPEILQVISEEEIDTDGIINGVIHDNSRYNLLRKGTVRNEEGLVNEAGAGTLALGGVESLPEDNRIFSLHFQAVGGGNTALLASQAGQQINSAITILNPDFISDQRDQTRFGEVDIISALNNQNNIESAFPPSANFALSNNIILSEQEDVSAVQGVIEAMAVNIDFQDLAGNALEDVAVGEEFKIVLSAEDLRPEGQQLGVFSVFADVLYDTVLIDVTEAELVGDFASPVLELPTAVEQGSGEGLIDELGGTQSNFNPVRSGSQTFAELTVTAKAPGQLDVSTNAPEGKTAKNTLFGVDVEVTEGTVYSEKSINLVGETEEGNPDLVITEFDAVVDHVLGGETEVNLTVENQGDGSSPGFQVEILYYTADDPGELEEEEPMVVKTLAFEELTGSGSRSETAAVSLPVEVMLAEALEDDPSVFGETVPEEGFFESNNIDYLGVRLVNSESSGETTEEFTNNGVDGTEGVNVDDIAYFPWDVVRNDLGNVVQGGEDEVETDGAVSGSDLTQVYDNIGTIISEGTGEAPSGLDLGRIDLDLDGAISPVDAVRVANRLGYNLNPAIIEESVG
>NC_019780.1|WP_041235322.1|852104_852320_+|hypothetical-protein
MRLEPLYQQEKETLVREAQKRGMEIGEERGIEIAQKRFAQKLLSKGMEIKQIAELTELSLEEITKLTNNDE
>NC_019780.1|WP_041235321.1|851860_852073_+|hypothetical-protein
MRLEPLYQQEKETLVREAEERGEERGEERTQREIAANLLSMGMGIEQIAQATGLSRKQVMKLINQNSDDQ
>NC_019780.1|WP_041235320.1|851626_851815_+|hypothetical-protein
MRLEPLYQQEKEELQREVKQLTQREIAANLLNKGMEIQEIAEVTGLSPEEVTKLINQNSDDQ
>NC_019780.1|WP_015228610.1|850747_851581_+|hypothetical-protein
MTRLIHDKFAKDYFESLLEPFGQINSQKRVSAEDQYIDVWFEPAQEHLRELNELGGLGRMATTPSMFEPYRNPVTPEQIGDCLLKLLLIKAEMKRQARRKESSLAEESVPKLWILTPTASSTVLSGFNALQTPDELEGFYTLGSSLSTNIIVIHQLPRTSETLWLRVLGRDRVQKEAIDELEALSENNPFRQRALELLYTLQKSLKSKQDIEPEDRELIMRLEPLYQIEREQRDREIKQEIATNLHSMGMGIEQIAQATGLSPKQVMKLINQNSDDQ
>NC_019780.1|WP_041235319.1|850435_850717_+|hypothetical-protein
MISSFVARSRPELDFLPSAIAPRIKIPSQLDRAPSLKPRSRTLPQTPIVLPPSNLDRAPSFKPRSRTLPPTSIAHPLSNPIAPRTRISYPNHL
>NC_019780.1|WP_015228609.1|849609_850446_+|hypothetical-protein
MTRLIHDKFAKDYFESLLEPFGKINSQKRVSAEDQYIDVWFEPAQEHLRELNELGGLGRMATTPSMFEPYRNPVTPEQIGDCLLKLLLVKTQMKRQARRKESSLAEESVPRLWILTPTASSKVLSGFNAVQTPDELEGFYTLGSSLNTQIIVIHQLPCTEETLWLRVLGRDRVQQEAIDELEALSENNPFRQRALELLYTLQKSLKSRQELPSEDRELIMRLEPLYQQEREQRDQEIKQLMQKQFAQKLLSKGMEIEQIAELTELSPEEITKLTNNDK
>NC_019780.1|WP_015228608.1|848527_849073_-|redoxin-domain-containing-protein
MLTSTDFSGLFNQRFLNNFFPIPASSPLILGLKTPNFELPDVTHDQQVKLNDYREEKPVILAFTRIFTEKQYCPLCYPHILELNQRYEAFTQRGIEILMITSTDVSQSKQVVKDLNIQFPLLSNPTCSVFRKYGVGQALGAPLPAEFVLDEEGVLQYKHLFSFLSPNANVEELLSVVSSDD
>NC_019780.1|WP_015228607.1|847042_848296_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase
MSQFLPISVVGVGLDGREGLTEKVRKIINEATVLVGSERQLSYFTSSAAKAVKLGNLEETIALIKTHQEASEKIVILTSGDPLFYGLGRLLLEHFPPNQLTFYPHLSALQIAFNRIKIPWQNATLISAHGRNTEALVKAIQRGDKKIGILTDYNNNPSAIAQLITALDLPFSYQFWVCENLEGTEESCRCLDLETVKSEQFSALNVVILLREETPIPDLETLPSLGLTDDLFLSFPDRPGLMTKREIRPLILAELGLKPEQIIWDIGAGTGAVSIEIARLFPTSHIYALEKTAMGASLIKANCQRLNVENVTVIEGSAPEKLPNSIHPQRIFIGGTGGNLTAILNHCEEQLVTGGRIVFALATLENLEEARQWLREHQWLDRILQIQISRSLPIAHLTRFSPLNPVTLLTAWRINQS
>NC_019780.1|WP_015228613.1|864253_864646_-|HEPN-domain-containing-protein
MNPSQQAILKKAVRSWRAAQTLYDEGFSDFAASRAYYSMFYVAEAFLEEDQMSFSGHAAVISAFGRDFAKPKRVPPHFHRYLLNAQDKRNRGDYGFYDEITPTQAKELIDQAEEFLQLAQSLIGNLSDET
>NC_019780.1|WP_015228614.1|864642_864963_-|nucleotidyltransferase-domain-containing-protein
MNNQLKQIINQYRNSLKQHYQEKLVKVILYGSQARGEAKADSDIDLLIILKDPVNAWEEIEQTGEFTSNFCLENNVVISRAFVSLSQFNQESLPFFRNVHREGILV
>NC_019780.1|WP_015228615.1|865301_866699_+|acetamidase/formamidase
MYRKGKSLFKGWQILLALVISIGVITNFWSIQTGTADDANFQGQKVSSNECSASPSTPRELDLVASPETVHWGFFSKNLPPVSTIHSGDYLTIEMITHHAGDDYARMIAGDEALESIYHWTKEEKTISQRGPGVHILTGPVYICGAEPGDLLEVRIVNLEPRPSKNPLYPGKAFGSNASAWWGFQYNNLEEEPKPREIITLYEVDTTGKRDWAKAVYRYRWTPQTTPDGVVHERIDTPGIVVDHSKVTKIDQTLEGVRIPLRYHVGAMGVAPKEADVVDSIPPSYFGGNIDDRHVGIGTSMYYPVSVPGALFSAGDAHAAQGDSELDGTAIEISMNGTFQFILHKQTDLEDTILEGIDYPLLETPDSWIVHGFTFPNYLAQLGENAQSKIYELSSLDPALQDSSTKLRDFLENGMGLTEDEAYSLITVGADFAITQVVDGNWGVHGILPKAMFDQANVKPKPSSE
>NC_019780.1|WP_015228616.1|866759_867998_-|LL-diaminopimelate-aminotransferase
MVKINENYLKLKAGYLFPEIARRVNTFAEANPNAEIIKLGIGDVTEPLPQACCDAMAKAVDEMRDRSTFQGYGPEQGFSWLREKIAQNDYQNRGCDISADEIFVSDGSKCDTGNILDILGDDNTIAVTDPVYPVYVDTNVMAGHTGSANDEGKYEGLIYIPVTAENNFTAAIPTNKNIDLIYLCFPNNPTGAVATKEHLQAWVNYAKSVDALILFDAAYEAYITDETIPHSIYEVEGAKDCVIEFRSFSKNAGFTGTRCALTVIPKTLTAKASDGSEIQLWQLWNRRHSTKFNGVSYIVQRGAEAVYSEQGKAEVKALINFYLDNAKIIREKLTAAGLTVYGGIHAPYIWVKAPEGLSSWDLFDKLLYAAHIVGTPGSGFGAAGEGYFRISAFNSRENVNEAMRRITQNLKV
>NC_019780.1|WP_015228617.1|868172_869270_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MILSFKTELNLNNQQKTLCAKHAGVARHAYNWGLSLTKFILDHNKANPDDKIKFPSAIELHKLLVALCKPKNLWYYEVSKCAPQFALRNLREAWKRCFGGVSKPPKFKKKGRNDSFTLDGSIKIDHFHVKLPKVGWVRTFERLPQGVNPKTITISRTADKWFVSFKIEVEVKNTPKAHEIVGVDLGVKTLATLSTGEVFEGAKSYRKFEAKLSRLQYLNRHKEIGSKNWKKAQIKMARLHRKIANIRKDVLHKLTTYLAKNHSKIVIENLNVKGMLANHKLAKAIADMGFYEFRRQLEYKCQLFGSQLIIVDRWFPSSKTCSNCGTVKEKMSLSERTFQCESCGFRCDRDLNASKNLAFAGSSLV
>NC_019780.1|WP_015228618.1|869397_870522_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MSRDGIGIRTAQERSQRQVGQIHVYDGEGKGKSQAALGVVLRSIGLGIHGEGTNRVLLLRFLKGPERVYDEDAAIAALQKGFPHLIDQVRTGRAEYFGKESVTPFDKQEAMRGWNIAKGAIASGLYSIIVLDELNPVLDLGLLALEDVVDTLQQKPDPLEVIVTGRSSPQKLLDLCDLHSEMKPHLATDQALEGIEIYTGDGKGKSTSALGKALLAIGRGIDRDRSHRVLIVQWLKGGTGYTEDAAIAALKASYPKLLDQIRCGRDAIVWRGKQQLDDYAEAERGWKTAKEAIESGTYKTIILDELNPTIDLELLDGKPIVETLAAKPDDTQVIITGRCFNRPPYFDLANVYSEMVCHKHYAYHGVELRRGVDY
>NC_019780.1|WP_156800647.1|870649_870865_-|hypothetical-protein
MATIALRAPSFARSPEPLTVRPRQEGRWLRHIETFFLLFGFFIRKKSPEISPISLVSLVSPISLPPLILKE
>NC_019780.1|WP_015228619.1|871234_872527_+|glucose-1-phosphate-adenylyltransferase
MKRVLSIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSGLQKIYVLTQFNSASLNRHISQTYNFSGFSDGFTEVLAAQQTPQNPNWFQGTADAVRKYLWLFQEWDVDEYLILSGDHLYRMDYEKFIQHHRDTNADITLSVIPIDEKRASSFGLMKIDDSGRIIDFSEKPKGDALKQMRVDTQTLGLDAEQAQKMPYIASMGIYVFKKEVLRELLEANHEQTDFGKEIIPSAAPNYRVQAYLFNGYWEDIGTIEAFYKANLGLTMQPKPSFSFYDKDAPIYTRARYLPPTKLLHCEVTESIIGEGCILKECTVSNSVLGIRSRIESGCSVESSMLMGADYYESNAERSSGGRSDHQIPIGIGENSKIRRAIVDKNARIGKNVLIMNKDRVEEANREDEGFYIRSGIVVILKNAIIPDDTVI
>NC_019780.1|WP_015228620.1|872702_873173_-|hypothetical-protein
MTNRDIFQRIEQELTELEAVTNQVQRFLQEREITQSSVSQDAIINALALTLHSFYTGVERIFQVVARQIDYLEPSGENWHRQLLEQMSLEIPEIRPALISTSIRTDLDEIRRFRHVVRSIYAYKIESKPVLKLANKIPTIWKDLEGEIRQFIYTFS
>NC_019780.1|WP_015228621.1|873169_873526_-|hypothetical-protein
MNAQEILSQIQQARQQRPLFLEKMKQRQKEGLKVAKQSADILKKQFSVTRVVLFGSLLNPETMSPHSDIDLAVWGLPETDLFRAGAMIERGHQFTIDLVEAEKVKPHILKAIHQGIEL

Crispr_ID: NC_019780_7

• CRISPR_ID: NC_019780_7
• CRISPR_location: 883068-883159
• CRISPR_type: TypeV-U4
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_7

Consensus_repeat	Method
CTCCACCCAACCTACGTTTGATCATTCACTTTT	CRISPRCasFinder

spacers of NC_019780_7

>7.1|883101|26|NC_019780|CRISPRCasFinder
ATAATTTGGTGTTGGGTTTCGCTACT

CRISPR arrays and Neighbor proteins around NC_019780_7

CRISPR arrays

The CRISPR arrays of NC_019780_7

>merge|NC_019780|7|883068-883159|CRISPRCasFinder
CTCCACCCAACCTACGTTTGATCATTCACTTTTATAATTTGGTGTTGGGTTTCGCTACTCTCCACCCAACCTACGTTTGATCATTCACTTTT

>NC_019780|7|7|883068-883159|CRISPRCasFinder
CTCCACCCAACCTACGTTTGATCATTCACTTTT	ATAATTTGGTGTTGGGTTTCGCTACT
CTCCACCCAACCTACGTTTGATCATTCACTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228632.1|885482_886334_-|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl|CDD|236017
NC_019780.1|WP_015228625.1|874976_875294_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228633.1|892219_892690_+|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	unknown	unknown	gnl|CDD|349967
NC_019780.1|WP_083874471.1|893148_894246_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase	unknown	unknown	gnl|CDD|366703
NC_019780.1|WP_015228637.1|895179_896211_-|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl|CDD|235413
NC_019780.1|WP_015228626.1|875744_876080_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NC_019780.1|WP_156800649.1|873864_874029_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235688.1|873991_874726_-|2-phosphosulfolactate-phosphatase-family-protein	unknown	unknown	gnl|CDD|234857
NC_019780.1|WP_041235324.1|875507_875696_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800650.1|891444_891735_-|hypothetical-protein	unknown	unknown	gnl|CDD|270916
NC_019780.1|WP_015228629.1|881403_882075_-|5'/3'-nucleotidase-SurE	unknown	unknown	gnl|CDD|234732
NC_019780.1|WP_015228627.1|877929_880026_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228641.1|898651_899896_-|MFS-transporter	unknown	unknown	gnl|CDD|340887
NC_019780.1|WP_015228628.1|880383_881097_+|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl|CDD|381169
NC_019780.1|WP_015228640.1|897910_898630_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228639.1|896850_897780_-|NAD(+)-kinase	unknown	unknown	gnl|CDD|179455
NC_019780.1|WP_015228622.1|873697_873877_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228638.1|896368_896854_+|SRPBCC-family-protein	unknown	unknown	unknown
NC_019780.1|WP_015228630.1|882116_882869_+|DUF541-domain-containing-protein	unknown	unknown	gnl|CDD|225516
NC_019780.1|WP_041235326.1|894319_894646_-|hypothetical-protein	unknown	unknown	gnl|CDD|189968

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228632.1|885482_886334_-|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl|CDD|236017	PRK07428, PRK07428, carboxylating nicotinate-nucleotide diphosphorylase.	8.82815e-157
NC_019780.1|WP_015228633.1|892219_892690_+|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	gnl|CDD|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.80916e-83
NC_019780.1|WP_083874471.1|893148_894246_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.86979e-52
NC_019780.1|WP_015228639.1|896850_897780_-|NAD(+)-kinase	gnl|CDD|179455	PRK02645, ppnK, NAD(+) kinase.	0
NC_019780.1|WP_015228641.1|898651_899896_-|MFS-transporter	gnl|CDD|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.5034e-58
NC_019780.1|WP_015228630.1|882116_882869_+|DUF541-domain-containing-protein	gnl|CDD|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	1.7734e-46
NC_019780.1|WP_041235688.1|873991_874726_-|2-phosphosulfolactate-phosphatase-family-protein	gnl|CDD|234857	PRK00886, PRK00886, 2-phosphosulfolactate phosphatase family protein.	2.15115e-128
NC_019780.1|WP_156800650.1|891444_891735_-|hypothetical-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	0.00502751
NC_019780.1|WP_015228629.1|881403_882075_-|5'/3'-nucleotidase-SurE	gnl|CDD|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	9.26376e-83
NC_019780.1|WP_015228626.1|875744_876080_-|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.05828e-08
NC_019780.1|WP_015228628.1|880383_881097_+|uroporphyrinogen-III-C-methyltransferase	gnl|CDD|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	2.72433e-102
NC_019780.1|WP_015228637.1|895179_896211_-|oxygen-dependent-coproporphyrinogen-oxidase	gnl|CDD|235413	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase.	0
NC_019780.1|WP_041235326.1|894319_894646_-|hypothetical-protein	gnl|CDD|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	0.00277018

Protein sequences

>NC_019780.1|WP_015228630.1|882116_882869_+|DUF541-domain-containing-protein
MNRFFQKNLWQGISLVVLSSLILLLGWNGFDRSSTAFAQDSSAPTLTVTGKGSESIETTLTEVRLGVEVEGKTAREVQEESAQRSTAVVELLRSRDVQNLETTGIRLQPQYDYNDGTRRLKGYQAINLVTFRVITEEIGNLLDAAVNVGATRIDSVTFTATDSAIEQAQKQALRTATRNAKAQADAVLETLNLRSQSVINIQIDGANAPVSPRSQSLRTRGDMAASSAPSSPVVGGEQEIEAQVTLQIRY
>NC_019780.1|WP_015228629.1|881403_882075_-|5'/3'-nucleotidase-SurE
MILTNDDGFKAQGIKALQAAIEDQGVIIAPETELSGCGHQVTTKRGLKLQQHSSKIYSVDGTPADCVRLAITQLFPDTEWVISGINAGGNLGADVYISGTVAAVREAVLLGRKGIAISHWRKYPLEIDWTIASRWTTKVLETLFSISLPSGCYWNVNLPHLESETDEPEIVFCEGGTQPLPVDYFFDGERYHYQGEYGKRQRTKGTDVDVCFSGNIAVSQLSL
>NC_019780.1|WP_015228628.1|880383_881097_+|uroporphyrinogen-III-C-methyltransferase
MKVYLIGAGLGNSQYLTQQAKDLLNEANILIYDALVDESILNLVPTKCRQIYVGKRGGEPSTPQTEINRLLVHYAQKNQTVIRLKNGDPFIFGRAREEIEALKKANCKVEIIPGLSSAITAPLLAGIPLTDKLLSRSFSVITAHEPDQLDWNALARIDTIVILMGGRNLNLIVKKLTREGKPLSCPIAIIKSAGTEEQKVWVSTLETIVETTQNMKLSPSIMVIGEVVNLRMVSNLN
>NC_019780.1|WP_015228627.1|877929_880026_+|hypothetical-protein
MTDTPFIKYSILVGKYLLDQDSLKDTTPIKYLLDFIKKDILVAYATEKLEIKKLPKKTKKEEVVSLVAESATHPQLLEIFQDNAVFFGLHPIQLEEILGCSKTERKRWTEEDRLPILHYEEFKYGKYPVYDFLKTIARLDQVSMWREEHENKKAQRRKQVAQTAKETRQKRAQERQEKLNYLQTAKQRWGEFSEVFELAYWAVIAHQLSDFYREKIRRAKSKGEEYSRIAEELDNLKASAIEVISKSQLTTLNFSFNCDYPPDVVWSQSGWMPYFEAKKGKHDLTGFYICELNLSTISERALFIISSGERERYDFPDCEDLVVKEMEDIQSDCIFWREETAITEGDLFTPKQVKQAINRSLNHQTIEEIRENGNKKFLELSHAAKLDRAEILEEQRQNAFLFREQFKQKLQSRKTTWLRHSPQNFTYFELAELTRWVSRAAKSLQQHDLSQLADKFYHLKNRAIGILNTCPLAKLNFYRPESPDYGYYDYYRDQFIAEIKDYYSLFSTEIIVPNSSDPDDCFQFHTPYPMGKNLFPSIGELEQVNHLEQEGRFRFGHPLTELELLIFNPQQIEDQILELIQQFDAKEIDERRQQRFREIAEATRQKRQRIKELEAMEIFLIENEEEASIAYFYQITKELGLSKSKAISWIRKQLKSIATCSETLKNYPEFSAKYFHQACKRKWSNNALKSKIKKIERS
>NC_019780.1|WP_015228626.1|875744_876080_-|helix-turn-helix-domain-containing-protein
MNQQFGQLIRQARKDKGYSQRELAKLLELDFTYLSKLENSRADYPPKEDVIRSLAHHLALDEEQLIFLAGRIPRQDESLLKEHYENMPTLFRRMRENPEFAKQVFEAADQE
>NC_019780.1|WP_041235324.1|875507_875696_-|hypothetical-protein
MKTVCQGRNLSNWRSLYKISEELGVTISNLIHRLRDLGWIEIDRASKQLYPLQKPRVETLTN
>NC_019780.1|WP_015228625.1|874976_875294_-|hypothetical-protein
MKPICNLLRSFVVTIVVSFALPVMLVLGLLTIALGMTYVPGVESIGEVTLQQLTAFLNIFGAGSVFRGVIVIGLTLALVAGWFDIYTVYRLYQFKQLDSEPFKNS
>NC_019780.1|WP_041235688.1|873991_874726_-|2-phosphosulfolactate-phosphatase-family-protein
MKLFVYDTPEATPQDTLPDCAVVIDVLRATTTIATVLAAGAEAVQAFSSIEELMSVSETWEDHRRLRAGERGGAKVEGCDLGNSPLECTAERVQGKRFFLSTTNGTRALQRVEKAPIVLTAAFVNDQAVINYLQREQPETVWLVGSGWQGSYSLEDTACAGAVAHSLLNGLSPSNLDGIGNDEVIGAIALYSQWQNNLLELFRFSSHGQRLLKLDRETDLIYCAKRNYLKVIPTQTELGVLVSG
>NC_019780.1|WP_156800649.1|873864_874029_+|hypothetical-protein
MSFLAESLRHDPDQVNAQIVWENLLACLNLNWVAQAQFVEEAINLKPKHQAQFE
>NC_019780.1|WP_015228622.1|873697_873877_+|hypothetical-protein
MSVHHFLAFLLGGFALFPSPVFAQMCGESDEMLPQTPKTGRTEGSRQQLITRGEENCPS
>NC_019780.1|WP_015228632.1|885482_886334_-|carboxylating-nicotinate-nucleotide-diphosphorylase
MIALPPKILVESLFREWLREDLGRGDRATGAIIKENHPQQEAIWMAKQTGIIAGLPFAEQIFSLLGETDCSPQVKEGSFCQEKQEILRLSGAPHTLLSGERVALNLVMRLSGIATLTQCYAEKIADFPAQLVDTRKTTPGLRLLEKYATQLGGAVNHRFGLDDAAMIKENHIRVAGGVKNAIERVRSNLPYPLTIEVETTTEAEVEEALTTDVNIIMLDNMPLPLMKQMVTQIRNSGKPIKIEASGNVNLNTIRQVAETGVDYISTSAPITQATWLDLSMKLL
>NC_019780.1|WP_156800650.1|891444_891735_-|hypothetical-protein
MIQGLSGIAPKRLADDPQTGELLWRHLVNVDDAFADVLSRMVKWRARDRYQSVQEIIDDLSPYSPQIASLKNQSRSQRSRNYNPLDRVVHNLKKTS
>NC_019780.1|WP_015228633.1|892219_892690_+|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL
MLKIVLYEPQIPPNTGNIARTCAALKTELHLVGNLGFEISDRAVKRAGLDYWPYVDLHQHADWTAFKKIQTQRGGRLIAFSVKGKSSHTSYPFQNGDWLLFGQENKGLPPEIMANCDEILRIPMIHPQVRSLNLSVSVAVGLYEAKRQLGELTSIL
>NC_019780.1|WP_083874471.1|893148_894246_+|LysM-peptidoglycan-binding-domain-containing-M23-family-metallopeptidase
MVRKVEPEPENNHFLLNLTRQPVLNHNIKPGDTLWELSQKYQTSPQEIAQENEMTPQQLLQVGKTLDIPVTPVFSLQKPESESQVVLRSQLPVGGIGGAISSEESPFQSFAEETLISPIPLVIAQEKTNAREKNPSAGSLLPIQEFLADVKQLERNYEGTSLNRDPLQQDGNPERENQGKFVSPVESSANGSSDNSLATAPIKVEFYNRFLNPSLGETVSPKLPPLSSPDQYLPNSPRKFNGYIWPAEGVFTSGYGRRWGRMHRGIDIAAPIGTPIVAAAPGEVLFAGWNNGGYGNLVKLRHPDGSLTLYAHNNKVLVRKGQEVDQGQQIAEMGNTGRSTGPHLHFEIHPSGKGAVNPLAYLPER
>NC_019780.1|WP_041235326.1|894319_894646_-|hypothetical-protein
MKKCKGDKGDKGDKGDKGDKGDKGDKGDKGDKGDKGEMGDKGEMGDKGEMGDKGDNFSSHLPISPIFRISPIFRIFPISPIFPISPISPFALLQRPIDFFSKPYIPTH
>NC_019780.1|WP_015228637.1|895179_896211_-|oxygen-dependent-coproporphyrinogen-oxidase
MSVKDTDFTATKHQFAPPEDAKSRVRQFMLSLQDEICSGLETLDGSGQTFQEDTWKRDEGGGGRSRVIKGGDLFEQGGVNFSEVFGTQLPPSILKQRPEAEGHEFFATGTSMVLHPRHPYVPTVHLNYRYFEAGPVWWFGGGADLTPYYPFAEDAVHFHQTLKTACDRHHSEYYPVFKRWCDEYFYIKHRQENRGLGGIFFDYQDGQGELYRGPNPDGKAGEYSRQLGSVEPRSWESLFALVQDCGKSFLPSYTPIAKERRSLEYGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTQGRIESILMSLPPLVRWEYCYHPEPNTPEAELYDTFLKPQDWVNYQ
>NC_019780.1|WP_015228638.1|896368_896854_+|SRPBCC-family-protein
MILNFSFKFIARKEKICCQFSLYKTYRVLSNASVDALWEKLINLGDVSWNPLLDHTNAPRGLRAKPGLIYQAVTRLTPIPIRVFVEKVDPGELLSLRVLAIPGIENRVTYQVESTLIGTYVSCSITLRGWLSPFLWWVIRPYASRVVRELAQSAESTEQVS
>NC_019780.1|WP_015228639.1|896850_897780_-|NAD(+)-kinase
MELKQIIIAYKAGDTQSKSWAETYARALEKRGAHVLMGPSGVKDNPYPVFLSSVSSQIDLALVLGGDGSALAAARHLAPEGALILAVNVGGHLGFLTEPFELFQDTEAVIDRLESDVYAIQRRMMLQAQVLEGGRIKPEPMSDRFFCLNEMSVKPASIDRMPTSILEMEVDGEVVDQFQGDGLLVATPTGSTCYTASANGPIVHPGMEAMVVTPICPLSLSSRPLVLPPGSVVNVWPLGEQEPLTKLWTDGALGTTIWPGQRVSVSMSKHLAKFIILREDHSFYTTLREKLWWAGTRVHYDNEHRNGNH
>NC_019780.1|WP_015228640.1|897910_898630_-|hypothetical-protein
MSRCKNQPKLSHCFWKNLLLVCLLFILSSCQDFSPKNPNVSSTQASLEAVTPQLKAFDLEAENWQTIKGEGVSLSLPKTYRGGNPLRDFTAIEEALKGLDQGYQKRLQAIKQNLDQIVFMAFDARSITPDALTNVNILKQPIEADVTLENYLETAVEALEKTHKIEGEIITTQGEKSLGRIIATVTTEEGVAMKQLFYFQPEAETMWITNYTTPESEFQNRVSNFEQSIASLKSGSPNQ
>NC_019780.1|WP_015228641.1|898651_899896_-|MFS-transporter
MLKKISEQLPSLNRTVWILASGRLLSEIGTGFVLFYAPIFFVNQVGLSATLVGIGIGSGQIAGVIGRFLGGVFTDNKSVGRRRTLLLSAAISVLADVFLALTYNFPTLLLGNLVLGLGVGLYWPATEAVIADITTPEERNEAFAVTRVADSLGLGIGVVLGGLIISTAGNYRLLFVADGISFLVFFAVIYFAVKESYNFEGQTTAKNPFSGWGIALRDRAFVTFLGINILFTTYISQIQSTLPLYFRNYVQTGGEALGFSPEIISALFTWYITFAAIMQLPMARFLNRFRRAQALTFSFSLWLIGFVLIWVTGITTVAPLVIAIITLGILSLGLNSYTPSASSLVADIAPASLRGVYLSLNSQCWAVGFFVGPPVGGWALDQSRWITDQFWLVAAATTLVGMFALRILNQLLKS

Crispr_ID: NC_019780_8

• CRISPR_ID: NC_019780_8
• CRISPR_location: 927071-927166
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_8

Consensus_repeat	Method
AAGGGGGGATAACGTTTGAGGGGA	CRISPRCasFinder

spacers of NC_019780_8

>8.1|927095|48|NC_019780|CRISPRCasFinder
AATAAGTGTGATTTGGATTGGTATAATCCCCCCTAACCCCCCTTCGTA

CRISPR arrays and Neighbor proteins around NC_019780_8

CRISPR arrays

The CRISPR arrays of NC_019780_8

>merge|NC_019780|8|927071-927166|CRISPRCasFinder
AAGGGGGGATAACGTTTGAGGGGAAATAAGTGTGATTTGGATTGGTATAATCCCCCCTAACCCCCCTTCGTAAGGGGGGGATAACGTTTGAGGGGA

>NC_019780|8|8|927071-927166|CRISPRCasFinder
AAGGGGGGATAACGTTTGAGGGGA	AATAAGTGTGATTTGGATTGGTATAATCCCCCCTAACCCCCCTTCGTA
AGGGGGGGATAACGTTTGAGGGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800654.1|920879_921035_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228664.1|921286_922258_+|3'(2'),5'-bisphosphate-nucleotidase	unknown	unknown	gnl|CDD|238775
NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA	unknown	unknown	gnl|CDD|260130
NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase	unknown	unknown	gnl|CDD|239787
NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter	unknown	unknown	gnl|CDD|223104
NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase	unknown	unknown	gnl|CDD|380432
NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein	unknown	unknown	gnl|CDD|224720
NC_019780.1|WP_015228098.1|918763_920665_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein	unknown	unknown	gnl|CDD|223560
NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF	unknown	unknown	gnl|CDD|180965
NC_019780.1|WP_015228661.1|915241_916531_-|dihydroorotase	unknown	unknown	gnl|CDD|236002
NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein	unknown	unknown	gnl|CDD|372967
NC_019780.1|WP_015228663.1|917004_917793_+|hypothetical-protein	unknown	unknown	gnl|CDD|372967
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|236012
NC_019780.1|WP_015228660.1|914688_915231_-|signal-peptidase-I	unknown	unknown	gnl|CDD|274044
NC_019780.1|WP_015228662.1|916500_916686_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein	unknown	unknown	gnl|CDD|132891
NC_019780.1|WP_015228670.1|928654_929410_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase	unknown	unknown	gnl|CDD|381680
NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015228098.1|918763_920665_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	8.2e-48	157.5	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228664.1|921286_922258_+|3'(2'),5'-bisphosphate-nucleotidase	gnl|CDD|238775	cd01517, PAP_phosphatase, PAP-phosphatase_like domains. PAP-phosphatase is a member of the inositol monophosphatase family, and catalyses the hydrolysis of 3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In Saccharomyces cerevisiae, HAL2 (MET22) is involved in methionine biosynthesis and provides increased salt tolerance when over-expressed. Bacterial members of this domain family may differ in their substrate specificity and dephosphorylate different targets, as the substrate binding site does not appear to be conserved in that sub-set.	8.57364e-106
NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA	gnl|CDD|260130	cd13967, PT_UbiA_5, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.20345e-21
NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase	gnl|CDD|239787	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	2.19192e-149
NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter	gnl|CDD|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	7.98077e-70
NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase	gnl|CDD|380432	cd20298, cupin_UAH, ureidoglycolate amidohydrolase (UAH) and related proteins, cupin domain. This family includes the cupin-fold protein, ureidoglycolate hydrolase (AllA; EC 3.5.3.19), which is involved in the breakdown of allantoin under aerobic conditions. Allantoin is the key intermediate of nitrogen fixation in bacteria, and its degradation occurs in several steps. AllA is involved in the third step of this pathway which consists of hydrolysis of (S)-ureidoglycolate to yield glyoxylate, ammonia, and CO2. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.08075e-10
NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	4.21516e-63
NC_019780.1|WP_015228098.1|918763_920665_+|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.52887e-123
NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein	gnl|CDD|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	3.99315e-82
NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF	gnl|CDD|180965	PRK07408, PRK07408, RNA polymerase sigma factor SigF; Reviewed.	4.34597e-152
NC_019780.1|WP_015228661.1|915241_916531_-|dihydroorotase	gnl|CDD|236002	PRK07369, PRK07369, dihydroorotase; Provisional.	0
NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein	gnl|CDD|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	6.56971e-19
NC_019780.1|WP_015228663.1|917004_917793_+|hypothetical-protein	gnl|CDD|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	6.51924e-38
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|236012	PRK07406, PRK07406, RNA polymerase sigma factor RpoD; Validated.	0
NC_019780.1|WP_015228660.1|914688_915231_-|signal-peptidase-I	gnl|CDD|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.06775e-47
NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein	gnl|CDD|132891	cd07051, BMC_like_1_repeat1, Bacterial Micro-Compartment (BMC)-like domain 1 repeat 1. BMC-like domains exist in cyanobacteria, proteobacteria, and actinobacteria and are homologs of the carboxysome shell proteins. They might be encoded from putative organelles involved in unknown metabolic process. Although it has been suggested that these carboxysome shell protein homologs form hexamers and further assemble into the flat facets of the polyhedral bacterial organelles shell at present no experimental evidence exists to directly support this view. Proteins in this CD contain two tandem BMC domains. This CD includes repeat 1 (the first BMC domain of BMC like 1 proteins).	2.64817e-56
NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase	gnl|CDD|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	1.55048e-89
NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	4.35908e-98

Protein sequences

>NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein
MKTQLLTAFIPLFAVTATALPSTAQEAENMQQSANSSPQEMFRCDLSQETPSTIITGMMSSENPNPIPLINWSEEYFSSPERALSLCQEVSQKLQTFHEEGQLTSLSLMSGEVDGESVICLKNTSESGCNPEQVLFPLETDKNPDVVLYELIAADFKPPRTRGDFPTRINFGVFNFL
>NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter
MEGSFTITLQIVIAVFAGITAQVLGETLKIPGIVFLLLIGVALGADGLGILYPDKLGMGLEVIVALLVAIILFEGGLNLELRDLGRVSSSLRNLVTIGTGITLFGGSMAAHWLGEFPWQLAFLYASLVVVTGPTVISPLLKQVAVDRQVATILEGEGVLIDPVGAILAVVVLDTILNSEAGVMEVLNGLLLRGGIGIIIGLVGGAIMGLLLKKPLNFLSEDLKNLVVLAGVWGLFGVSQMIRSESGLMAVVLAGVVVRSLSVPEERMLRRFKGQLTMLGVSVLFILLAADLSIASVFALGWGSVLTVLCLMFLVRPLSVFVCTIGSRLNWRQKLFISWVGPKGIVSASVASLFAILLTQRGITGGDSLKAIVFLTIMMTVVIQGLTARWVARGLKLTSEGTTGAVIIGCNALGCLLGELFQQEGESVVMIDTDPEACEGAEAVNLNVIQSSGLDESVLEEAGIESLGTFLAMTNNGEVNLVLAQRALEEFQPPRVFAAFPKNSKARTPANKTKVNQAFMSEIPIKVWNEYVDEGKIKLGHTVLREEGFSFQQAHLQALIRSGELLPLLIKRQDSLQVVKADQEWQPGEEIFYILHDPRPKLLKRLSGGETASRLAIERLAEVEEVSLATPESN
>NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein
MDRQTFTGDGSTNRIRNHNAWTERLIIIALLMAGLFLFTINLGDLPLRDWDEGTVAQVAREIFQAPENTDRWLFPTLWDKPYLNKPPLVHNLIATFYRLGGVNETMARLPSALLMAVSVPLFYALGKEVFLSRQPALFSALIYLTTLPLVRHGRLAMLEGAVVCFSILLMWSVLRSRRDLRWCFGIGISLSLIGLTKGMMALLLGGIAFGFLAWDTPRLYRSFYFWGGILLGCLPVGAWYGFQWLHYQEAFIETAVFSQSLSRVWQAVDDNGGPPWYYFQRLLHFLPWLIFSAWGLHLAWHDRIWSWSKLVLVWSGVYFLVISAMSTKLPWYILPLYPALALAGGRMLAEIFRYPREKSYSRYWGGLLLFLAVVGLGASVYSGLEEAMSQKLAVIFLAVALTTGISGGLILRRNPQFINILTWGMYVSLVLLVLSPHWLWELNEAYPVKPVAMLIRDQVPPDVPIYTSFAYERPSLNFYAQRRVIAVTNEELKMYWEKTPQAYFLVDQKTFQQLSLAENSEQNYQAPPNWNLVTPENNN
>NC_019780.1|WP_015228664.1|921286_922258_+|3'(2'),5'-bisphosphate-nucleotidase
MAYEKELQVGIEASLSAAKLCQAVRGNIPDRIEKQDRSPVTIADFGSQAIICRALAEAFPNDPVVGEEDATALRSSEMSEQLAQVTEYVKQEIPNVSTEDVTQWIDHGNGEPSQRFWTLDPIDGTKGFLRGDQYAIALALIEEGEVKVGILACPALSLDLAPPLNEEGLLFVAVRGEGTKVRSLKTDEFTAIRVASPDDEEHLRFVESVEVAHGDQSQQSAIAQQAGIKSPSLRMDSQAKYGAVASGAAALYLRLPSPKQPDYRENIWDHAAGVIVAEEAGGRASDMYGKPLDFSVGAKLFQNRGVVVSNGSLHEAVLAALNK
>NC_019780.1|WP_156800654.1|920879_921035_+|hypothetical-protein
MPLTPDTFLQKLSPEILGSLSEEQLTAIREMLAEALPKSSPKLVDIRWRIN
>NC_019780.1|WP_015228098.1|918763_920665_+|group-II-intron-reverse-transcriptase/maturase
MNQIRYKCDARTKTFLMLWLGFGFNLMAETEWSQIDWKEVEIRVFKLQKRIYRASLSGDVAKVHKLQRLLLRSWCAKLLAVRRISQDNQGKNTAGVDGIKSLSPKQRLSLAESLTLTGKGKSLRRVWIPKPGRKEKRGLGIPVMEDRARQALLKLALEPEWEAKFEPNSYGFRPGRSCHDAERAIYLTVKQKAKWVLDADISKCFDRINHNVLLQKLNTTPTIARQIRAWLKSGVLDRGDWMPTEEGTPQGGVISPLLANIALHGLEEYIKQWAETWKGGKRDNRWSISLIRYADDFVVLHKDKSVIQQARKLIEQWLHGLGLELSESKTRICHTLYDTEETKAGFDFLGWNVRQYRVGKNHTGKSTNGELLGFKTIIKPSDKSIKTHYEKIVEVLDSMKGKSQEAIIGRLNPIIIGWCNYHKTICSKETFSHIDNLVYNKLRRWIKSRHPNQTLKWCEGRYFHLTKEKNLDGEDRNAKWVFSTPPDIPNSPVAGKHELRKHVWTPIERHIKIEGTRSPYDGDWRYWSKRRGEYPGTPKRVATLMKQQKGKCARCGLYVKDEDVVEVDHIVPKAEGGKDHYKNLQLLHRHCHHQKTAEDRQRQMDNKGRKKAQKKTKKGRKSETRQGSSVSTA
>NC_019780.1|WP_015228663.1|917004_917793_+|hypothetical-protein
MLRPLTFSLSTVAIVVSSFPLSAEGNSLTSSFPQLFSQAPQTVPEVIVDTIPIENEPSPTPQPEDVVVESKPSNPNPTPTANDRRFTCEYNNGQYTVMYNPQSQPNQSYPWAIPQQMGGNWSPERRCNAISDRLENYRPDGLLELQTSVINNQNVVCVTTQNDPSCRIVFTVPKGQDPILTRDRVFENLASANQGQQTQGVTTYTSNSSLRDLLGGRSSNQASQQSNDSINLRPFLDRSDGGTGNQLRSNSSPSRLNPNLFR
>NC_019780.1|WP_015228662.1|916500_916686_-|hypothetical-protein
MEIGKLRGMVERAIIDGELSRQERDEIMETIYGKKQITQEECELMRTLQQKIWTAEIKIQG
>NC_019780.1|WP_015228661.1|915241_916531_-|dihydroorotase
MDSGDQNSGLTQLLQQVRVLDTVSETDRIADVLLENNQIKAIHPQITDYPSSTEVKDAHGLIFAPGLVDLYSHSGEPGWEERETLISLGESALAGGFTRVGILPDTQPPLDAPATIEWLKRFTPSHAPKFHFWADLTVGGKGEQMTELGELAATGIVGFTDGQPLGNLGLLHQVLTYVQPLGKPVALSLGDRALSKNGVMREGKLSLKTGLPGNPAVSETAALAAILELVAVIPTPVHLMGVSTARSVELIADGKARGLPITASTTWMHLILNTAAITTYDPNLNICPPLGDRSDQLALITAVKSGIIDAIAVNHTPYTYEEKTVAFADTPPGAIGLELALPLLWQTFVETGEWTALELWQALSASPQTCLNLPPLRCTVGETTEAILFDPKKTWTVCKSNLKSLSTNTPWFGKQITGQVVDRFFNDVK
>NC_019780.1|WP_015228660.1|914688_915231_-|signal-peptidase-I
MEKSKSIWQELWENLKAILIALIIAFFIRVLIAEPRYIPSDSMFPTLEVGDRIVVEKVSYYFSSPEFQDIVVFNPPQLLQNYGYDANQAFIKRVIGDSGETIAVGNGKVYLSGMKIKEPYIKEPPNYELSPLTVPKNKLFVLGDNRNNSNDSHVWGFLPEQNVIGRAVFRFWPLDRIGLM
>NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase
MSYKRVLLKLSGEALMGSHHYGIDPTVVSEIAQEVAEIVNTGVEMAIVVGGGNIFRGVKAASAGMDRATADYIGMIATVMNALTLQDALEQEGIPTRVQSAITMQQVAEPYIRRRAIRHLEKKRVVIFAAGSGNPFFTTDTTAALRAAEIDAEVLFKATQVDGVYDSDPQTNPNARLFETITYTYVLSENLRVMDGSAIALCRDNNIPIVIFNLRQRGNIMRVVKGESVGTLVGGTP
>NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor
MKLSDVETKMKKAIDATQQSFNSLRTGRANASVLDRVMVEYYGMETPLKSLANISTPDATTITIQPYDKGSLQQIEKAISMSDIGLTPNNDGEMVRLNIPPLTSDRRQELVKIAGKYAEEGRVSIRNIRRDAIEEVRKAEKKHELSEDEARDIQDKIQKLTDKYVAKVDEILKAKEEDISTV
>NC_019780.1|WP_015228670.1|928654_929410_-|hypothetical-protein
MKRLLLLQILVIALLSLSSCKLPESDTESETTQNPQTESSPEEQPDEEEKEQEETAEEPQSESSTVVGLKQATNPEEFVQERGETPGERRNDPFSLFPVPPQQSQAEIETLEAQREAAEEGEAATGEDGESPESLPSLPSEGSPQAPPQPEIARAVQVQGAIRIGNSAVAILKAPNDPNSRYVRPGNFIAGGQVLLKRINMEDRPTPTVVLEELGVDQEVIKAVAVAQPEETEETEETEQSVLPPPPPPAI
>NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF
MPSPLTENVKQNSLELLKSYQENPSQVTRNCIVELNLGLVRKEAHHWVHQCGENYEDLIQVGCIGLIRAIERFQLSKGNAFSSFAIPYIRGEIQHYLRDRSNTVKIPRRWLELRQQAVKVTSQLREKLNRQPTDTEIAEALNVSMKEWENVKLAAKNREVLSLDLPLGSGEGDETTSLGELVPDAQYRSFQLAQEDQIRLQQGLVGLEDKIRQVLEFVFLHDLTQKEAAEMLGVSVVIVSRRMKKGLKLLKSKML
>NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase
MNNPQQTNLFENQSQWEKIPYDANIPIPRQTYSDLEQLESHCRQCQRCELSQTRSQVVVSRGNKNADVMIIGEAPGQSEDEQGLPFVGRSGQLLDQILASVALSVEKDVYISNIVKCRPPQNRTPTAKEINACKPYLLEQVALVDPLIILFTGATAFKGLTGEKKAISKIRGQWLQWEGRWAMAIFHPAYLLRNPSREKGKPKWLMWQDIQNVSQQLKAMRTNHK
>NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein
MGIELRSYVYLDSLQAQHAAYMGTVSLGFLPLPGDTSLWIEISPGIEINRITDVALKATNVRPGVQAVERLYGLLEIHSSQKGDVTIAGRAILDALGVSEKDGLKPRVVSSQIIRNIDAHQAQLINRTRRGHMLLKGESLYVFEVEPAAFAALAANEAEKAANINILQVSAVGSFGRLYLGGEEREIIAASHAVKGAIENVRGRERVEVKTNE
>NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase
MTKTTIQKLEIEAITQKNFAPYGELILPTEDGKPYDETDAKLDLSQGTPRFYIMQLKQRGRQFHLITRHQLCTQCLGALEGKSWFLAVAPPNQDQKPNVDQLKAFCIPGNCFVKLHKGTWHAGPYFDANVINFYNLELSDTNEVDHFSYDFLASDHLIWEI
>NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA
MSLEISPQQEWLRDRALQLIIYPSIWVALALASLTAFSQAMMGLESDWRPILFVFLVALIPYNLDRLFDAYVQKSSDEKAQAYFRSNFGLLALLILAVGGVITLLWFAPNPVRYVSLAVVFPLVYGAPIFPIPRAKKWRWYRLKDIPGSKAWIVCTIITYAAIALPLAYAKTDFDTRAALTTCFIFAFEGSNANLFDVRDLESDARKGVLTLPLMVGLKNSRIVLTVMNLLMLGIVLFYGNASIVSFYPEIFSATGLMLILIWTVDEETPLLFYDLIIDGLLFLPAIVYYSFQFIIF
>NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein
MAKTDFKDYYSILGINKNATESDIKKAYRRLALKYHPDRNPNDKEAENRFKEVSEAYEVLSDPEKRRKYDQFGQYWQQADQFQQRGDRARTTTTGFGNDMGGFDFSQYGSFEEFIDELLGRFNTTGGTRTRYKYQTSPGGFSDFGSGVGGATSVGADAEATIRLTFSEAFRGVQKRLSIGNEVVNVRIPGGAKPGSRIRVPGKGKASPYGNRGDLYLNVELQPHSFFRFEDDHLICEVPITPDEAILGGNIEVPTPDGKVSVKVPTGIRSGQSLRLRGKGWTKPKGERGDLFVRVNVTIPKNITAKEREFYEKIRQTRQEDPRENIKNVQL
>NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD
MVNALTNQQQKSELERLIEEQSHEAAQGNTVALEVEPADSDLEKEALLEAEPPEEAPQKIEATTTKEDSKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVGQALPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELARKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYIRT

Crispr_ID: NC_019780_9

• CRISPR_ID: NC_019780_9
• CRISPR_location: 932751-932861
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_9

Consensus_repeat	Method
CTTCACTCCACCCAACCTACTTTTT	CRISPRCasFinder

spacers of NC_019780_9

>9.1|932776|61|NC_019780|CRISPRCasFinder
ATGCTACTTCACTCCACCCAACCTACTTTTTATGCTAATGACCAATTGGTGTTGGGTTTCG

CRISPR arrays and Neighbor proteins around NC_019780_9

CRISPR arrays

The CRISPR arrays of NC_019780_9

>merge|NC_019780|9|932751-932861|CRISPRCasFinder
CTTCACTCCACCCAACCTACTTTTTATGCTACTTCACTCCACCCAACCTACTTTTTATGCTAATGACCAATTGGTGTTGGGTTTCGCTTCACTTCACCCAACCTACTTTTT

>NC_019780|9|9|932751-932861|CRISPRCasFinder
CTTCACTCCACCCAACCTACTTTTT	ATGCTACTTCACTCCACCCAACCTACTTTTTATGCTAATGACCAATTGGTGTTGGGTTTCG
CTTCACTTCACCCAACCTACTTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800656.1|936323_936668_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase	unknown	unknown	gnl|CDD|380432
NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein	unknown	unknown	gnl|CDD|132891
NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase	unknown	unknown	gnl|CDD|239787
NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF	unknown	unknown	gnl|CDD|180965
NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein	unknown	unknown	gnl|CDD|367909
NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein	unknown	unknown	gnl|CDD|224720
NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein	unknown	unknown	gnl|CDD|223560
NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein	unknown	unknown	gnl|CDD|215598
NC_019780.1|WP_015228683.1|944258_944684_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein	unknown	unknown	gnl|CDD|372967
NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850
NC_019780.1|WP_015228684.1|944865_945294_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein	unknown	unknown	gnl|CDD|341373
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|236012
NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA	unknown	unknown	gnl|CDD|260130
NC_019780.1|WP_015228679.1|936770_936974_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228670.1|928654_929410_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase	unknown	unknown	gnl|CDD|381680
NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter	unknown	unknown	gnl|CDD|223104

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein	gnl|CDD|341373	cd04598, CBS_pair_GGDEF_EAL, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	7.82011e-16
NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase	gnl|CDD|380432	cd20298, cupin_UAH, ureidoglycolate amidohydrolase (UAH) and related proteins, cupin domain. This family includes the cupin-fold protein, ureidoglycolate hydrolase (AllA; EC 3.5.3.19), which is involved in the breakdown of allantoin under aerobic conditions. Allantoin is the key intermediate of nitrogen fixation in bacteria, and its degradation occurs in several steps. AllA is involved in the third step of this pathway which consists of hydrolysis of (S)-ureidoglycolate to yield glyoxylate, ammonia, and CO2. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.08075e-10
NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein	gnl|CDD|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	3.99315e-82
NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase	gnl|CDD|239787	cd04254, AAK_UMPK-PyrH-Ec, UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).	2.19192e-149
NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF	gnl|CDD|180965	PRK07408, PRK07408, RNA polymerase sigma factor SigF; Reviewed.	4.34597e-152
NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein	gnl|CDD|132891	cd07051, BMC_like_1_repeat1, Bacterial Micro-Compartment (BMC)-like domain 1 repeat 1. BMC-like domains exist in cyanobacteria, proteobacteria, and actinobacteria and are homologs of the carboxysome shell proteins. They might be encoded from putative organelles involved in unknown metabolic process. Although it has been suggested that these carboxysome shell protein homologs form hexamers and further assemble into the flat facets of the polyhedral bacterial organelles shell at present no experimental evidence exists to directly support this view. Proteins in this CD contain two tandem BMC domains. This CD includes repeat 1 (the first BMC domain of BMC like 1 proteins).	2.64817e-56
NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	4.21516e-63
NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein	gnl|CDD|367909	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex. TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.	2.77255e-37
NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein	gnl|CDD|215598	PLN03138, PLN03138, Protein TOC75; Provisional.	6.92568e-05
NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein	gnl|CDD|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	6.56971e-19
NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	4.35908e-98
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|236012	PRK07406, PRK07406, RNA polymerase sigma factor RpoD; Validated.	0
NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA	gnl|CDD|260130	cd13967, PT_UbiA_5, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.20345e-21
NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase	gnl|CDD|381680	cd10030, UDG-F4_TTUDGA_SPO1dp_like, Uracil DNA glycosylase family 4, includes Thermotoga maritima TTUDGA, Bacillus phage SPO1 DNA polymerase, and similar proteins. Uracil DNA glycosylase family 4 includes Thermotoga maritima TTUDGA, a robust uracil DNA glycosylase that shares narrow substrate specificity and high catalytic efficiency with family 1, acting on double-stranded and single-stranded uracil-containing DNA. Members of this family possess four conserved cysteine residues required to coordinate the [4Fe-4S] iron-sulfur cluster. This family also includes the N-terminal domain of Bacillus phage SPO1 DNA polymerase. Bacteriophage SPO1 is one of a group of large, lytic, tailed bacteriophages of Bacillus subtilis, and contains hydroxymethyluracil (hmUra) in place of thymine in their DNA. It has been speculated that this UDG domain may help discriminate between hmUra containing SPO1 DNA and thymine-containing host DNA. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other.	1.55048e-89
NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter	gnl|CDD|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	7.98077e-70

Protein sequences

>NC_019780.1|WP_015228674.1|932180_932666_+|ureidoglycolate-hydrolase
MTKTTIQKLEIEAITQKNFAPYGELILPTEDGKPYDETDAKLDLSQGTPRFYIMQLKQRGRQFHLITRHQLCTQCLGALEGKSWFLAVAPPNQDQKPNVDQLKAFCIPGNCFVKLHKGTWHAGPYFDANVINFYNLELSDTNEVDHFSYDFLASDHLIWEI
>NC_019780.1|WP_015228673.1|931106_931748_-|bacterial-microcompartment-protein
MGIELRSYVYLDSLQAQHAAYMGTVSLGFLPLPGDTSLWIEISPGIEINRITDVALKATNVRPGVQAVERLYGLLEIHSSQKGDVTIAGRAILDALGVSEKDGLKPRVVSSQIIRNIDAHQAQLINRTRRGHMLLKGESLYVFEVEPAAFAALAANEAEKAANINILQVSAVGSFGRLYLGGEEREIIAASHAVKGAIENVRGRERVEVKTNE
>NC_019780.1|WP_015228672.1|930436_931114_-|uracil-DNA-glycosylase
MNNPQQTNLFENQSQWEKIPYDANIPIPRQTYSDLEQLESHCRQCQRCELSQTRSQVVVSRGNKNADVMIIGEAPGQSEDEQGLPFVGRSGQLLDQILASVALSVEKDVYISNIVKCRPPQNRTPTAKEINACKPYLLEQVALVDPLIILFTGATAFKGLTGEKKAISKIRGQWLQWEGRWAMAIFHPAYLLRNPSREKGKPKWLMWQDIQNVSQQLKAMRTNHK
>NC_019780.1|WP_015228671.1|929406_930174_-|RNA-polymerase-sigma-factor-SigF
MPSPLTENVKQNSLELLKSYQENPSQVTRNCIVELNLGLVRKEAHHWVHQCGENYEDLIQVGCIGLIRAIERFQLSKGNAFSSFAIPYIRGEIQHYLRDRSNTVKIPRRWLELRQQAVKVTSQLREKLNRQPTDTEIAEALNVSMKEWENVKLAAKNREVLSLDLPLGSGEGDETTSLGELVPDAQYRSFQLAQEDQIRLQQGLVGLEDKIRQVLEFVFLHDLTQKEAAEMLGVSVVIVSRRMKKGLKLLKSKML
>NC_019780.1|WP_015228670.1|928654_929410_-|hypothetical-protein
MKRLLLLQILVIALLSLSSCKLPESDTESETTQNPQTESSPEEQPDEEEKEQEETAEEPQSESSTVVGLKQATNPEEFVQERGETPGERRNDPFSLFPVPPQQSQAEIETLEAQREAAEEGEAATGEDGESPESLPSLPSEGSPQAPPQPEIARAVQVQGAIRIGNSAVAILKAPNDPNSRYVRPGNFIAGGQVLLKRINMEDRPTPTVVLEELGVDQEVIKAVAVAQPEETEETEETEQSVLPPPPPPAI
>NC_019780.1|WP_015228669.1|928099_928648_+|ribosome-recycling-factor
MKLSDVETKMKKAIDATQQSFNSLRTGRANASVLDRVMVEYYGMETPLKSLANISTPDATTITIQPYDKGSLQQIEKAISMSDIGLTPNNDGEMVRLNIPPLTSDRRQELVKIAGKYAEEGRVSIRNIRRDAIEEVRKAEKKHELSEDEARDIQDKIQKLTDKYVAKVDEILKAKEEDISTV
>NC_019780.1|WP_015228668.1|927389_928103_+|UMP-kinase
MSYKRVLLKLSGEALMGSHHYGIDPTVVSEIAQEVAEIVNTGVEMAIVVGGGNIFRGVKAASAGMDRATADYIGMIATVMNALTLQDALEQEGIPTRVQSAITMQQVAEPYIRRRAIRHLEKKRVVIFAAGSGNPFFTTDTTAALRAAEIDAEVLFKATQVDGVYDSDPQTNPNARLFETITYTYVLSENLRVMDGSAIALCRDNNIPIVIFNLRQRGNIMRVVKGESVGTLVGGTP
>NC_019780.1|WP_015228667.1|926370_926904_-|hypothetical-protein
MKTQLLTAFIPLFAVTATALPSTAQEAENMQQSANSSPQEMFRCDLSQETPSTIITGMMSSENPNPIPLINWSEEYFSSPERALSLCQEVSQKLQTFHEEGQLTSLSLMSGEVDGESVICLKNTSESGCNPEQVLFPLETDKNPDVVLYELIAADFKPPRTRGDFPTRINFGVFNFL
>NC_019780.1|WP_015228666.1|924464_926366_+|NhaP-type-Na+(K+)/H+-antiporter
MEGSFTITLQIVIAVFAGITAQVLGETLKIPGIVFLLLIGVALGADGLGILYPDKLGMGLEVIVALLVAIILFEGGLNLELRDLGRVSSSLRNLVTIGTGITLFGGSMAAHWLGEFPWQLAFLYASLVVVTGPTVISPLLKQVAVDRQVATILEGEGVLIDPVGAILAVVVLDTILNSEAGVMEVLNGLLLRGGIGIIIGLVGGAIMGLLLKKPLNFLSEDLKNLVVLAGVWGLFGVSQMIRSESGLMAVVLAGVVVRSLSVPEERMLRRFKGQLTMLGVSVLFILLAADLSIASVFALGWGSVLTVLCLMFLVRPLSVFVCTIGSRLNWRQKLFISWVGPKGIVSASVASLFAILLTQRGITGGDSLKAIVFLTIMMTVVIQGLTARWVARGLKLTSEGTTGAVIIGCNALGCLLGELFQQEGESVVMIDTDPEACEGAEAVNLNVIQSSGLDESVLEEAGIESLGTFLAMTNNGEVNLVLAQRALEEFQPPRVFAAFPKNSKARTPANKTKVNQAFMSEIPIKVWNEYVDEGKIKLGHTVLREEGFSFQQAHLQALIRSGELLPLLIKRQDSLQVVKADQEWQPGEEIFYILHDPRPKLLKRLSGGETASRLAIERLAEVEEVSLATPESN
>NC_019780.1|WP_015228665.1|922658_924278_-|glycosyltransferase-family-39-protein
MDRQTFTGDGSTNRIRNHNAWTERLIIIALLMAGLFLFTINLGDLPLRDWDEGTVAQVAREIFQAPENTDRWLFPTLWDKPYLNKPPLVHNLIATFYRLGGVNETMARLPSALLMAVSVPLFYALGKEVFLSRQPALFSALIYLTTLPLVRHGRLAMLEGAVVCFSILLMWSVLRSRRDLRWCFGIGISLSLIGLTKGMMALLLGGIAFGFLAWDTPRLYRSFYFWGGILLGCLPVGAWYGFQWLHYQEAFIETAVFSQSLSRVWQAVDDNGGPPWYYFQRLLHFLPWLIFSAWGLHLAWHDRIWSWSKLVLVWSGVYFLVISAMSTKLPWYILPLYPALALAGGRMLAEIFRYPREKSYSRYWGGLLLFLAVVGLGASVYSGLEEAMSQKLAVIFLAVALTTGISGGLILRRNPQFINILTWGMYVSLVLLVLSPHWLWELNEAYPVKPVAMLIRDQVPPDVPIYTSFAYERPSLNFYAQRRVIAVTNEELKMYWEKTPQAYFLVDQKTFQQLSLAENSEQNYQAPPNWNLVTPENNN
>NC_019780.1|WP_015228675.1|932893_933787_-|prenyltransferase-UbiA
MSLEISPQQEWLRDRALQLIIYPSIWVALALASLTAFSQAMMGLESDWRPILFVFLVALIPYNLDRLFDAYVQKSSDEKAQAYFRSNFGLLALLILAVGGVITLLWFAPNPVRYVSLAVVFPLVYGAPIFPIPRAKKWRWYRLKDIPGSKAWIVCTIITYAAIALPLAYAKTDFDTRAALTTCFIFAFEGSNANLFDVRDLESDARKGVLTLPLMVGLKNSRIVLTVMNLLMLGIVLFYGNASIVSFYPEIFSATGLMLILIWTVDEETPLLFYDLIIDGLLFLPAIVYYSFQFIIF
>NC_019780.1|WP_015228676.1|934050_935046_+|DnaJ-domain-containing-protein
MAKTDFKDYYSILGINKNATESDIKKAYRRLALKYHPDRNPNDKEAENRFKEVSEAYEVLSDPEKRRKYDQFGQYWQQADQFQQRGDRARTTTTGFGNDMGGFDFSQYGSFEEFIDELLGRFNTTGGTRTRYKYQTSPGGFSDFGSGVGGATSVGADAEATIRLTFSEAFRGVQKRLSIGNEVVNVRIPGGAKPGSRIRVPGKGKASPYGNRGDLYLNVELQPHSFFRFEDDHLICEVPITPDEAILGGNIEVPTPDGKVSVKVPTGIRSGQSLRLRGKGWTKPKGERGDLFVRVNVTIPKNITAKEREFYEKIRQTRQEDPRENIKNVQL
>NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD
MVNALTNQQQKSELERLIEEQSHEAAQGNTVALEVEPADSDLEKEALLEAEPPEEAPQKIEATTTKEDSKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVGQALPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELARKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYIRT
>NC_019780.1|WP_156800656.1|936323_936668_+|hypothetical-protein
MDFFLSLSPLEVECSHPSLFMGVINSESPSHDCSLSYKNDNLTITTGAQTIDFSDIFHCSIAIDPSFRFCQVASSFLITKLIVTVFACSQHKATDPQLLFDLETETKRAIDHQN
>NC_019780.1|WP_015228679.1|936770_936974_-|hypothetical-protein
MFFSELTPIWKELTAQPITFTGGLVSGFLRLNPNQDPLKSWLSQQGATSSDAPSGQRSNAPQSINIE
>NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein
MFKDGEDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGEKSLPCLPCLPLLPCLPLLDAFLLKKS
>NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein
MLSSNATHLNPNSTIAQLETHQYQVDADTLGEVVSTEFKNHPDLPGVIVKEGEAVLGVISRRKFLEQMSQPYSIELYLRRPIRVLLEVMETDTLTLKEDSAINEAVKRALNRPLDLLYEPIIVQRKDQSLELLELHNLLLAQSKIFAQVNKIINQQKEEARQYAENLKQEQAKVREYTRQLEQEQLEAQRRNQVLEMQRAKLSRQANAISELNDRFVQLGELLSKEGKETFAQMLSSVEAISDSTARIINIGEGFKEELEVVNSATQLIERVSQQVRNLSIQVALAANRPGSGAQGQMSGLSRITTEIGNLGSKTSEATTEVNQIAYRFKGQIEDLTSAAAESEEVARSLVRRSQQTQQALDELERLLNEHREEDTAVDYVQDENTAEQEASNV
>NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein
MLILILLGVGGGVAAAWYFIYYRLSPTVEKSITPMISRPLEMGKLEAFSLTSLKFGKTVLPPSENYSETVIIPAIEVDFTPLKLITQQTLNLDVTLIEPEVKVEQTTTGQWLTTQFTPQPPGFLKINLNTLTVENSKIALSPRNETGELQTPVNLTLPQLKSQFFDNNQRIQFQLENLSVTDTTGNLNLEGEANLESGEVEVNVTSNNLAMEELARLVTSPLAIKSGNINLNTDANISLDGRLPSFEGTASLNDLSAQLDQFSTPITDTNAEVRLSGQDIIVEDFNTEFGDISAVATGSINLATGYDLTATIEPTPISNLLAAVDMESLETPVSGTIEAKIAITGALENPKIRVTANSTENIKLDELEFSAFQTELSVEGTEVVVENFQATPTTGGEIIATGTIGLTPKQKIALEVELNDVSGEIVRPYQPNLPADLGILNGAGKLTGALSDWKSLQGTGEANLAIAGGSVTLPQLELAQGRLQAQIDVNSLQPEQLTDQVPEPLQNPVSGEFRLNANLADLSPEKVSVIGEGSLSVPNGEIGATSIVFNQGRLNADVNFSKIPIALFVPQAPPEYSDELLSGRFQVSADVGELSPETISLTGNGNLNLTRGEIGATAITFNQGQLEANVSLKQIPIAPFLPEESPENNELLSAQLQVSADVTEFDVNTIQGNGSGSVTISGNDRASITLSDLRLNRGNWQGNLDVRRLKVSPFLPELPIQLDEALVSTQLSAQGTLDNLTPAGINMQGSGEINRILGGNIVADLIRLEAGGFQIVASPQNLQLGKIAEELEGDVGGEVTVEGTLESLSPAGITAQADLNFSQGVALITNPLQTQLRWNGEQMILEEATAEDFFAAGSIELDLEKEGTEIIEQLDLTVDAENLDLARLPLPQVEPVGKIDVQGLANFSGNLKGNIDQPQLQGEIRLENFAVERFDFDSEMVGGIEANARQGVLLDLTGNDNNTPDRIQIGLLSPDENDLLPLEPLSLLIKRNQATIEGIRYGEEFDVSLENLPLDLLKDFAPLPPELAQQPASGELEGELTVNLNNYNVLGELALIKPSLGRFNSDRASANFTYRNNTVTIREALLKEEASTYRGNGRLTLTETNPEFEANLNIEKGRIQDILSALQLFDISDINQNFASPEYGNANDLNVSSLDIQNQPIETQLERFSEIKALLAQLRANQTETTAIPPLGAAQGNFSGNINLKGTSFALPDIQGEFSLDGDRWQWGPYQAETVTSKGSVNNGVITLLPVRLASEDSFINLSGTFGGENQSAQLRVNQIPVATVQNFVELPEFIGVSGFINGSATVAGTQDNPSARGELEVLEATLNESPIDNIQGSFSYSNSQLNFFARGLLTPETEPVTLSGDIPYQLPFASVTPPSEELSISMNLKDESFSLLDVVSNGQLTWNGGEGEINLAITGPFNLENFQFENLTTEGVIRLDNASIGTAFIPEPLTDIQTLVEFNFNKLNIQEFNANFGGGEVTATGGLALFDPSVTNDSLNLNLETLTVNVPDLYEGDVAGKINIAQTALEPEIGGEITVSDGEVILAETETPTATEGQEEADMSNIGFSNLNIILGENLNVVRPPIMDFLADGRLVLNGNLAAMRPQGTVTLQRGQVNIGPTQFRLAKGYEQTATFVPSQGLDPTLNVRLATSVAETSGNFSEDSGAEEINVSSGLGTLQSVRVEALVQGRASELQPGQLTANNNVLTLSSDPNRSETEILALLGGGLTSGFGQGNTALGLANLAGSTFFGTFQNTIGDALGLSEFRIFPTLIPTETEEGEESSGSALGFGAEAGIDISNDFSFSVLTIFNAEQTFQYSVRYRLSDDILFRGSTDLSDNDSLIIEYETRF
>NC_019780.1|WP_015228683.1|944258_944684_-|hypothetical-protein
MTHKPDKIKSKPRQKIDRNSPFPFPQDTPNKMGKSTAVMEREMKRMLLKIHQEQRESIADEFLKKLPEKGITIEEFQANFLLSTVNPKQMNSEEISKLATYIYQHDPDTFQSVLTQPNRVQFLSRPILSAIVGIMASKWLN
>NC_019780.1|WP_015228684.1|944865_945294_-|hypothetical-protein
MSEEQVQEFATLEAEQEQETQKATSETKAATGSKDSITLRRTEENRPVGDGKLELWGTFRTMGGDRPILASKLSVVESFRTMGGSRPVFATQLPTVGNFYSSGSRPIGASVLKIDETYSNFGNRPVASNQIDDPSLLMGYID

Crispr_ID: NC_019780_10

• CRISPR_ID: NC_019780_10
• CRISPR_location: 948167-948320
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_10

Consensus_repeat	Method
CTTGCCTAAGGCAACTTGCCTTTTGCCTCTTGCCT	CRISPRCasFinder

spacers of NC_019780_10

>10.1|948202|28|NC_019780|CRISPRCasFinder
CTTGCCTCTTGCCTCTTGCCTTTTGCCT
>10.2|948265|21|NC_019780|CRISPRCasFinder
AAGGCAACTTGCCTAAGGCAA

CRISPR arrays and Neighbor proteins around NC_019780_10

CRISPR arrays

The CRISPR arrays of NC_019780_10

>merge|NC_019780|10|948167-948320|CRISPRCasFinder
AATCACTTTTGTCTCTTGCCTCTTGCCTCTTGCCTCTTGCCTCTTGCCTCTTGCCTTTTGCCTCTTGCCTAAGGCAACTTGCCTTTTGCCTCTTGCCTAAGGCAACTTGCCTAAGGCAACTTGCCTTTTGCCTCTTGCCTAAGGCAACTTGCCT

>NC_019780|10|10|948167-948320|CRISPRCasFinder
AATCACTTTTGTCTCTTGCCTCTTGCCTCTTGCCT	CTTGCCTCTTGCCTCTTGCCTTTTGCCT
CTTGCCTAAGGCAACTTGCCTTTTGCCTCTTGCCT	AAGGCAACTTGCCTAAGGCAA
CTTGCCTTTTGCCTCTTGCCTAAGGCAACTTGCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein	unknown	unknown	gnl|CDD|341373
NC_019780.1|WP_015228692.1|952674_952983_+|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl|CDD|132897
NC_019780.1|WP_071880285.1|953719_953905_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800661.1|951853_952033_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800665.1|953055_953196_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228683.1|944258_944684_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228687.1|949867_950335_+|DNA-phosphorothioation-associated-protein-4	unknown	unknown	gnl|CDD|274953
NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein	unknown	unknown	gnl|CDD|215598
NC_019780.1|WP_156800659.1|948696_948837_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228688.1|950426_951311_-|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NC_019780.1|WP_156800663.1|952004_952616_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379188
NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein	unknown	unknown	gnl|CDD|367909
NC_019780.1|WP_015228684.1|944865_945294_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228693.1|953369_953723_+|carbon-dioxide-concentrating-mechanism-protein-CcmK	unknown	unknown	gnl|CDD|132897
NC_019780.1|WP_015228686.1|946040_948038_+|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl|CDD|235395
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl|CDD|236012
NC_019780.1|WP_015228689.1|951486_951669_-|phycobilisome-degradation-protein-NblA	unknown	unknown	gnl|CDD|367960
NC_019780.1|WP_015228679.1|936770_936974_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228685.1|945482_946001_-|WbuC-family-cupin-fold-metalloprotein	unknown	unknown	gnl|CDD|275159
NC_019780.1|WP_156800656.1|936323_936668_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein	gnl|CDD|341373	cd04598, CBS_pair_GGDEF_EAL, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	7.82011e-16
NC_019780.1|WP_015228692.1|952674_952983_+|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl|CDD|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	3.18127e-34
NC_019780.1|WP_015228687.1|949867_950335_+|DNA-phosphorothioation-associated-protein-4	gnl|CDD|274953	TIGR04062, hypothetical_protein_CY0110_29519, dnd system-associated protein 4. A DNA sulfur modification system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. Members of this protein fam ily are strictly limited to species with the dnd operon, and are found close to the dnd operon on the chromosomes of species such as Nostoc sp. PCC 7120, Geobacter uraniireducens Rf4, and Roseobacter denitrificans OCh 114. [DNA metabolism, Restriction/modification].	5.95446e-58
NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein	gnl|CDD|215598	PLN03138, PLN03138, Protein TOC75; Provisional.	6.92568e-05
NC_019780.1|WP_015228688.1|950426_951311_-|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	3.05714e-14
NC_019780.1|WP_156800663.1|952004_952616_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	4.16277e-09
NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein	gnl|CDD|367909	pfam04357, TamB, TamB, inner membrane protein subunit of TAM complex. TamB is an integral inner membrane protein that forms a complex - the translocation and assembly module or TAM - with the outer membrane protein, TamA. TAM is responsible for the efficient secretion of the adhesin protein Ag43 in E.coli K-12.	2.77255e-37
NC_019780.1|WP_015228693.1|953369_953723_+|carbon-dioxide-concentrating-mechanism-protein-CcmK	gnl|CDD|132897	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain. CcmK1-4 and CcmL proteins found in Synechocystis sp. strain PCC 6803 make up the beta carboxysome shell. These CcmK proteins have been shown to form hexameric units, while the CcmL proteins have been shown to form pentameric units. Together these proteins further assemble into the flat facets of the polyhedral carboxysome shell. The structures suggest that the central pores and the gaps between hexamers limit the transport of metabolites into and out of the the carboxysome.	2.30524e-42
NC_019780.1|WP_015228686.1|946040_948038_+|excinuclease-ABC-subunit-UvrB	gnl|CDD|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD	gnl|CDD|236012	PRK07406, PRK07406, RNA polymerase sigma factor RpoD; Validated.	0
NC_019780.1|WP_015228689.1|951486_951669_-|phycobilisome-degradation-protein-NblA	gnl|CDD|367960	pfam04485, NblA, Phycobilisome degradation protein nblA. In the cyanobacterium Synechococcus PCC 7942, nblA triggers degradation of light-harvesting phycobiliproteins in response to deprivation nutrients including nitrogen, phosphorus and sulphur. The mechanism of nblA function is not known, but it has been hypothesized that nblA may act by disrupting phycobilisome structure, activating a protease or tagging phycobiliproteins for proteolysis. Members of this family have also been identified in the chloroplasts of some red algae.	1.0375e-16
NC_019780.1|WP_015228685.1|945482_946001_-|WbuC-family-cupin-fold-metalloprotein	gnl|CDD|275159	TIGR04366, hypothetical_protein, cupin fold metalloprotein, WbuC family. Members of this family show sequence similarity to cupin fold proteins (see pfam07883), including conserved His residues likely to serve as metal-binding ligands. Many members occur in bacterial O-antigen biosynthesis regions. Some members have acquired the gene symbol wbuC (e.g. Jarvis, et al, 2011), but publications using this term do not ascribe a function.	2.97497e-59

Protein sequences

>NC_019780.1|WP_015228686.1|946040_948038_+|excinuclease-ABC-subunit-UvrB
MSTFQLQSSYQPTGDQPITIEQLTESLLNKNRFQTLLGATGTGKTYTVANVIEKISKPTLVLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYIPVSDTYIEKTASINDEIDMLRHSATRSLFEREDVIVVASISCIYGLGMPSEYLKAAIPLRLGEETDQRQLLRDLVSVQYTRNDTELQRGRFRLKGDVLEIVPAYEDRIVRVEFFGDEIDALRYVDPTTGEVLKSLEGLNLYPARHFVTPDGQLERACEEIKAELKGRLEELEKEGKLLEAQRLEQRTKYDLELLTEVGYCNGVENYSRHLAGRSAGSPPECLVDYFPDDWLLIVDESHVTVPQLRGMYNGDQSRKKVLIDHGFRLPSAADNRPLKAEEFWEKVNQCIFVSATPGDWEIEQSEGNVVEQVIRPTGVLDPEVFVRPTEGQIDDLLGEIKIRSEKNERVLVTTLTKRMAEDLTEYCEGREIRVRYLHSEIHSIERIEILQDLRQGKFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARHVDGQAILYADQLTDSMDQAIQETQRRRKIQIEYNKKHGITPQSIVKKQKNSILSFLDISRRLNSQQLEMVYEQADELPLDKIPQLVEQLEAEMKDAAEKLEFEKAANLRDRVKQLREKLLRH
>NC_019780.1|WP_015228685.1|945482_946001_-|WbuC-family-cupin-fold-metalloprotein
MNNLPIKHLNQDLINTVAKEATNSERLRKNYNFHELSDKVQRFINIMQPGTYVRPHRHTRPEEMQGFEFFIALQGKIGVLLFDESGNVIHTETLSLEEGNYGIEIAEGTFHTLVALAPNTVMFELKEGPYISTSDKDFLPNFPQEGTTTAREQVKIWESYFVGNAKPSYNRK
>NC_019780.1|WP_015228684.1|944865_945294_-|hypothetical-protein
MSEEQVQEFATLEAEQEQETQKATSETKAATGSKDSITLRRTEENRPVGDGKLELWGTFRTMGGDRPILASKLSVVESFRTMGGSRPVFATQLPTVGNFYSSGSRPIGASVLKIDETYSNFGNRPVASNQIDDPSLLMGYID
>NC_019780.1|WP_015228683.1|944258_944684_-|hypothetical-protein
MTHKPDKIKSKPRQKIDRNSPFPFPQDTPNKMGKSTAVMEREMKRMLLKIHQEQRESIADEFLKKLPEKGITIEEFQANFLLSTVNPKQMNSEEISKLATYIYQHDPDTFQSVLTQPNRVQFLSRPILSAIVGIMASKWLN
>NC_019780.1|WP_156800867.1|938541_944097_-|DUF748-domain-containing-protein
MLILILLGVGGGVAAAWYFIYYRLSPTVEKSITPMISRPLEMGKLEAFSLTSLKFGKTVLPPSENYSETVIIPAIEVDFTPLKLITQQTLNLDVTLIEPEVKVEQTTTGQWLTTQFTPQPPGFLKINLNTLTVENSKIALSPRNETGELQTPVNLTLPQLKSQFFDNNQRIQFQLENLSVTDTTGNLNLEGEANLESGEVEVNVTSNNLAMEELARLVTSPLAIKSGNINLNTDANISLDGRLPSFEGTASLNDLSAQLDQFSTPITDTNAEVRLSGQDIIVEDFNTEFGDISAVATGSINLATGYDLTATIEPTPISNLLAAVDMESLETPVSGTIEAKIAITGALENPKIRVTANSTENIKLDELEFSAFQTELSVEGTEVVVENFQATPTTGGEIIATGTIGLTPKQKIALEVELNDVSGEIVRPYQPNLPADLGILNGAGKLTGALSDWKSLQGTGEANLAIAGGSVTLPQLELAQGRLQAQIDVNSLQPEQLTDQVPEPLQNPVSGEFRLNANLADLSPEKVSVIGEGSLSVPNGEIGATSIVFNQGRLNADVNFSKIPIALFVPQAPPEYSDELLSGRFQVSADVGELSPETISLTGNGNLNLTRGEIGATAITFNQGQLEANVSLKQIPIAPFLPEESPENNELLSAQLQVSADVTEFDVNTIQGNGSGSVTISGNDRASITLSDLRLNRGNWQGNLDVRRLKVSPFLPELPIQLDEALVSTQLSAQGTLDNLTPAGINMQGSGEINRILGGNIVADLIRLEAGGFQIVASPQNLQLGKIAEELEGDVGGEVTVEGTLESLSPAGITAQADLNFSQGVALITNPLQTQLRWNGEQMILEEATAEDFFAAGSIELDLEKEGTEIIEQLDLTVDAENLDLARLPLPQVEPVGKIDVQGLANFSGNLKGNIDQPQLQGEIRLENFAVERFDFDSEMVGGIEANARQGVLLDLTGNDNNTPDRIQIGLLSPDENDLLPLEPLSLLIKRNQATIEGIRYGEEFDVSLENLPLDLLKDFAPLPPELAQQPASGELEGELTVNLNNYNVLGELALIKPSLGRFNSDRASANFTYRNNTVTIREALLKEEASTYRGNGRLTLTETNPEFEANLNIEKGRIQDILSALQLFDISDINQNFASPEYGNANDLNVSSLDIQNQPIETQLERFSEIKALLAQLRANQTETTAIPPLGAAQGNFSGNINLKGTSFALPDIQGEFSLDGDRWQWGPYQAETVTSKGSVNNGVITLLPVRLASEDSFINLSGTFGGENQSAQLRVNQIPVATVQNFVELPEFIGVSGFINGSATVAGTQDNPSARGELEVLEATLNESPIDNIQGSFSYSNSQLNFFARGLLTPETEPVTLSGDIPYQLPFASVTPPSEELSISMNLKDESFSLLDVVSNGQLTWNGGEGEINLAITGPFNLENFQFENLTTEGVIRLDNASIGTAFIPEPLTDIQTLVEFNFNKLNIQEFNANFGGGEVTATGGLALFDPSVTNDSLNLNLETLTVNVPDLYEGDVAGKINIAQTALEPEIGGEITVSDGEVILAETETPTATEGQEEADMSNIGFSNLNIILGENLNVVRPPIMDFLADGRLVLNGNLAAMRPQGTVTLQRGQVNIGPTQFRLAKGYEQTATFVPSQGLDPTLNVRLATSVAETSGNFSEDSGAEEINVSSGLGTLQSVRVEALVQGRASELQPGQLTANNNVLTLSSDPNRSETEILALLGGGLTSGFGQGNTALGLANLAGSTFFGTFQNTIGDALGLSEFRIFPTLIPTETEEGEESSGSALGFGAEAGIDISNDFSFSVLTIFNAEQTFQYSVRYRLSDDILFRGSTDLSDNDSLIIEYETRF
>NC_019780.1|WP_015228681.1|937224_938409_-|hypothetical-protein
MLSSNATHLNPNSTIAQLETHQYQVDADTLGEVVSTEFKNHPDLPGVIVKEGEAVLGVISRRKFLEQMSQPYSIELYLRRPIRVLLEVMETDTLTLKEDSAINEAVKRALNRPLDLLYEPIIVQRKDQSLELLELHNLLLAQSKIFAQVNKIINQQKEEARQYAENLKQEQAKVREYTRQLEQEQLEAQRRNQVLEMQRAKLSRQANAISELNDRFVQLGELLSKEGKETFAQMLSSVEAISDSTARIINIGEGFKEELEVVNSATQLIERVSQQVRNLSIQVALAANRPGSGAQGQMSGLSRITTEIGNLGSKTSEATTEVNQIAYRFKGQIEDLTSAAAESEEVARSLVRRSQQTQQALDELERLLNEHREEDTAVDYVQDENTAEQEASNV
>NC_019780.1|WP_015228680.1|937022_937232_-|collagen-like-triple-helix-repeat-containing-protein
MFKDGEDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGDGGEKSLPCLPCLPLLPCLPLLDAFLLKKS
>NC_019780.1|WP_015228679.1|936770_936974_-|hypothetical-protein
MFFSELTPIWKELTAQPITFTGGLVSGFLRLNPNQDPLKSWLSQQGATSSDAPSGQRSNAPQSINIE
>NC_019780.1|WP_156800656.1|936323_936668_+|hypothetical-protein
MDFFLSLSPLEVECSHPSLFMGVINSESPSHDCSLSYKNDNLTITTGAQTIDFSDIFHCSIAIDPSFRFCQVASSFLITKLIVTVFACSQHKATDPQLLFDLETETKRAIDHQN
>NC_019780.1|WP_015228677.1|935095_936262_-|RNA-polymerase-sigma-factor-RpoD
MVNALTNQQQKSELERLIEEQSHEAAQGNTVALEVEPADSDLEKEALLEAEPPEEAPQKIEATTTKEDSKKKSYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLSELERTRTELEATIGCEPTDEEWAEEVGQALPKFRRRLLLGRRAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKILSQELARKPTEEEIAERMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKSLLREDLEDVLDTLSPRERDVLRLRYGLEDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSILKEYIRT
>NC_019780.1|WP_156800659.1|948696_948837_-|hypothetical-protein
MLSGAFSKIGNTSHYLEILYQKARSSATPEKKFFAFNGFSGCRGWG
>NC_019780.1|WP_015228687.1|949867_950335_+|DNA-phosphorothioation-associated-protein-4
MSVHRVRVAKDKASLVQALIREKESRGTFETYADVIMFAAAYGGKHQKYVPITTGISNDPAPISLEIFLSRGYDWAIKLIAIAHWQDTSILSPYEAQAQTQRVTLIEQAANGGLELLGEALRGAVDYSDRLLLVLNQERYRKPNPPPNFDLSRFL
>NC_019780.1|WP_015228688.1|950426_951311_-|universal-stress-protein
MFKRCLICTDFTDGLDRFASFVPSLSASGVNCLVFLHSVPYWEEGEIPHVDEEKVEAAKKRLQVALENVPDGIEVKVEVPSGRPSDTIPRIVEREKIEIVLAGTPIRSFLQEKVFGSTSLSLARATSAPLMIFRPNQISVYTKEELELRCQHLWRSMLIPYNDSEAAQYLVKQIKNYFENDGASSLEECILLWVINEGGRMPEETVKARQEEAEKRIAEVKQDLESIGLKVETQVRRGNPTVEIINAVMTKDVSAIAVGSDDRGGLLQWTVPSLANEILRSSWYPVLFFSQARS
>NC_019780.1|WP_015228689.1|951486_951669_-|phycobilisome-degradation-protein-NblA
MELSLEQEFNVRSFENQVKHMSREQAQAFLVQLYEQMLTRENMYKEFLKHEWGIDQGYSA
>NC_019780.1|WP_156800661.1|951853_952033_-|hypothetical-protein
MNSVLILLVITYALSLIGSFLAITLALPLAERQEELTLLITVQGILIAAALGFYFGKKT
>NC_019780.1|WP_156800663.1|952004_952616_+|helix-turn-helix-domain-containing-protein
MTNKIKTEFIAFCMTKSTTSDYTLRLKNLMEQVGITNFKQLSEQTGVSKKQILHLRRGKIKQMRVEVLLALGSTLGVSVNELIEWFSGETSSPVLSTREQFERESLYIIESWLLQWPTVVSAIEQNPELPAQRVIKLLNPFEKLLKFWRVERIGQVGEVVTYNPQQHQLLSGNVEPEPTVKVRYVGYRHGNKLLYRAKVEPID
>NC_019780.1|WP_015228692.1|952674_952983_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MPIAVGVIQTDGFPAVLAAADAMVKTASVTLVSFDKAERAQFYVAIRGQVSEVERSMIAGIEAAEQSYNGTVITHYTIPNPPENLESVMPIAFSDEVEAFRV
>NC_019780.1|WP_156800665.1|953055_953196_-|hypothetical-protein
MLDSPKPNGEKPKRANLTGKDTARANPSQGLSPILECGKGSDEMRF
>NC_019780.1|WP_015228693.1|953369_953723_+|carbon-dioxide-concentrating-mechanism-protein-CcmK
MSLDAVGSLETKGFPGVLAAADAMVKTGNVTLVGYIRAGSARFTIIIRGDVSEVKTAMDAGINAVDKAYGAALETWVIIPRPHENVECVLPIAYNENVERFRQSTERPLIGSSQNRS
>NC_019780.1|WP_071880285.1|953719_953905_-|hypothetical-protein
MFRKKQLSLVISHWSLVISHWSLITDYWSLITDYWSLITDYWSLITVGFRGTPPNLLLLNG

Crispr_ID: NC_019780_11

• CRISPR_ID: NC_019780_11
• CRISPR_location: 1165474-1165629
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_11

Consensus_repeat	Method
ACAACCCAACATCAATCAGAATCGTAGGTTCGGTGACAACCCAACATC	CRISPRCasFinder

spacers of NC_019780_11

>11.1|1165522|60|NC_019780|CRISPRCasFinder
GTAGGTTGGGTGATAACCCAACATCAATCAATTATCAATTAAGGAATCGTAGGTTCGGTG

CRISPR arrays and Neighbor proteins around NC_019780_11

CRISPR arrays

The CRISPR arrays of NC_019780_11

>merge|NC_019780|11|1165474-1165629|CRISPRCasFinder
ACAACCCAACATCAATCAGAATCGTAGGTTCGGTGACAACCCAACATCGTAGGTTGGGTGATAACCCAACATCAATCAATTATCAATTAAGGAATCGTAGGTTCGGTGACAACCCAACATCAATCAGAATCGTAGGTTCGGTGACAACCCAACATC

>NC_019780|11|11|1165474-1165629|CRISPRCasFinder
ACAACCCAACATCAATCAGAATCGTAGGTTCGGTGACAACCCAACATC	GTAGGTTGGGTGATAACCCAACATCAATCAATTATCAATTAAGGAATCGTAGGTTCGGTG
ACAACCCAACATCAATCAGAATCGTAGGTTCGGTGACAACCCAACATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228878.1|1174905_1175253_+|nickel-type-superoxide-dismutase-maturation-protease	unknown	unknown	gnl|CDD|274282
NC_019780.1|WP_015228865.1|1156845_1157859_-|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|133464
NC_019780.1|WP_015228867.1|1159948_1160989_-|ATP-grasp-enzyme,-D-alanine-D-alanine-ligase	unknown	unknown	gnl|CDD|224102
NC_019780.1|WP_015228879.1|1175357_1177646_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl|CDD|223394
NC_019780.1|WP_015228874.1|1171013_1171295_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228863.1|1155903_1156503_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl|CDD|178955
NC_019780.1|WP_015228873.1|1169174_1170578_+|NAD-dependent-malic-enzyme	unknown	unknown	gnl|CDD|223358
NC_019780.1|WP_015228880.1|1177844_1178207_+|heterocyst-frequency-control-protein-PatD	unknown	unknown	unknown
NC_019780.1|WP_015228869.1|1162500_1163340_-|O-methyltransferase	unknown	unknown	gnl|CDD|366722
NC_019780.1|WP_015228861.1|1154918_1155293_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228876.1|1173087_1173879_+|YdcF-family-protein	unknown	unknown	gnl|CDD|99750
NC_019780.1|WP_015228864.1|1156556_1156832_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|225635
NC_019780.1|WP_015228871.1|1165735_1166770_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl|CDD|177069
NC_019780.1|WP_015228870.1|1163972_1165349_+|MFS-transporter	unknown	unknown	gnl|CDD|340890
NC_019780.1|WP_156800679.1|1159650_1159863_-|hypothetical-protein	unknown	unknown	gnl|CDD|185628
NC_019780.1|WP_156800870.1|1171445_1172909_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228866.1|1157919_1159659_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224055
NC_019780.1|WP_015228868.1|1160992_1162330_-|ATP-grasp-domain-containing-protein	unknown	unknown	gnl|CDD|235876
NC_019780.1|WP_015228872.1|1166968_1169029_+|DUF4101-domain-containing-protein	unknown	unknown	gnl|CDD|372576
NC_019780.1|WP_015228877.1|1173875_1174502_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228878.1|1174905_1175253_+|nickel-type-superoxide-dismutase-maturation-protease	gnl|CDD|274282	TIGR02754, putative_signal_peptidase, nickel-type superoxide dismutase maturation protease. Members of this protein family are apparent proteases encoded adjacent to the genes for a nickel-type superoxide dismutase. This family belongs to the same larger family (see pfam00717) as signal peptidase I, an unusual serine protease suggested to have a Ser/Lys catalytic dyad. [Cellular processes, Detoxification, Protein fate, Protein modification and repair].	8.12397e-28
NC_019780.1|WP_015228865.1|1156845_1157859_-|glycosyltransferase-family-4-protein	gnl|CDD|133464	cd06854, GT_WbpL_WbcO_like, The members of this subfamily catalyze the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate (Und-P) molecule and N-acetylhexosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylhexosamine precursor. The WbcO/WbpL substrate specificity has not yet been determined, but the structure of their biosynthetic end products implies that UDP-N-acetyl-D-fucosamine (UDP-FucNAc) and/or UDPN-acetyl-D-quinosamine (UDP-QuiNAc) are used. The subgroup of bacterial UDP-HexNAc:polyprenol-P HexNAc-1-P transferases includes the WbcO protein from Yersinia enterocolitica and the WbpL protein from Pseudomonas aeruginosa. These transferases initiate LPS O-antigen biosynthesis. Similar to other GlcNAc/MurNAc-1-P transferase family members, WbpL is a highly hydrophobic protein possessing 11 predicted transmembrane segments.	2.10584e-70
NC_019780.1|WP_015228867.1|1159948_1160989_-|ATP-grasp-enzyme,-D-alanine-D-alanine-ligase	gnl|CDD|224102	COG1181, DdlA, D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane].	2.29526e-40
NC_019780.1|WP_015228879.1|1175357_1177646_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl|CDD|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NC_019780.1|WP_015228863.1|1155903_1156503_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl|CDD|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	5.08493e-143
NC_019780.1|WP_015228873.1|1169174_1170578_+|NAD-dependent-malic-enzyme	gnl|CDD|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	0
NC_019780.1|WP_015228869.1|1162500_1163340_-|O-methyltransferase	gnl|CDD|366722	pfam01596, Methyltransf_3, O-methyltransferase. Members of this family are O-methyltransferases. The family includes catechol o-methyltransferase, caffeoyl-CoA O-methyltransferase and a family of bacterial O-methyltransferases that may be involved in antibiotic production.	1.09166e-50
NC_019780.1|WP_015228876.1|1173087_1173879_+|YdcF-family-protein	gnl|CDD|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	3.43858e-44
NC_019780.1|WP_015228864.1|1156556_1156832_+|helix-turn-helix-domain-containing-protein	gnl|CDD|225635	COG3093, VapI, Plasmid maintenance system antidote protein [General function prediction only].	2.19704e-11
NC_019780.1|WP_015228871.1|1165735_1166770_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl|CDD|177069	CHL00149, odpA, pyruvate dehydrogenase E1 component alpha subunit; Reviewed.	0
NC_019780.1|WP_015228870.1|1163972_1165349_+|MFS-transporter	gnl|CDD|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.62174e-97
NC_019780.1|WP_156800679.1|1159650_1159863_-|hypothetical-protein	gnl|CDD|185628	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional.	0.00183359
NC_019780.1|WP_015228866.1|1157919_1159659_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.78462e-158
NC_019780.1|WP_015228868.1|1160992_1162330_-|ATP-grasp-domain-containing-protein	gnl|CDD|235876	PRK06849, PRK06849, hypothetical protein; Provisional.	0
NC_019780.1|WP_015228872.1|1166968_1169029_+|DUF4101-domain-containing-protein	gnl|CDD|372576	pfam13355, DUF4101, Protein of unknown function (DUF4101). This is a family of uncharacterized proteins, and is sometimes found in combination with pfam00226.	1.70362e-40
NC_019780.1|WP_015228877.1|1173875_1174502_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.82569e-25

Protein sequences

>NC_019780.1|WP_015228870.1|1163972_1165349_+|MFS-transporter
MTSTPLAEDKLSISTRIAYGIGDFGPSMSLNVLIIFFFFFLTTVAGVPPNIAGTILLISKGGNAIATLIVGSLSDHTRSRWGRRHSWMLGSAPFFALSFALHWWVPPLTSWGLYSYYLLVAIVFQVSFACFLIPYSALLTDISENNKEHIRLNGWRFSFAMVASTFSLLLMQVLTIGNDEPQRQLPILGTVCAIAILISIGWCCWGTEEAELKAASRRVNFQDLKQIASNRPFWLLLGIYAFSWMALLVAPTILPYFIVNNLRLPESAITSITLIMKIATFAALFIWKPISEWLGKKASFWLGISIWIIGNCGLFYLQPEQPQWIYFIAALQGMGMAAAYLIPPSMVPEAIDWDELKTGQRREGVFNSIMLFANKMAQALGLFLFGQILSFAGFRESLPPMEQPESAIGAIAITVILLPTLPLIGSLILLFFYPIDIETHQQTVFKLQQQRSTQTSNQ
>NC_019780.1|WP_015228869.1|1162500_1163340_-|O-methyltransferase
MTITNEKPTQKTARPVTPLGILVEKLEGIVEQAKQEGVSENLQSAIDAAFQLGSGLDPYLDQVTTSESEALANLDRKTREEDWSKCFSDGETVRKLEQEMLSGHIEGQTLKMFVHMTKAKRILEIGMFTGYSALAMAEALPEDGKIIACEVDPYTAQFGRDCFDVSPHGNKITILVDPALESMKKLASEGETFQLAFIDADKTGYKDYYRLLMDEGLLESGGYIFVDNTLLQGQAYLPPQQRNENGEAIAQFNQMIADDPRVEQVLLPLRDGLTMIRKL
>NC_019780.1|WP_015228868.1|1160992_1162330_-|ATP-grasp-domain-containing-protein
MTLLFVRSRLNSVFKTIGTLTLLLIAFPINLITVLFSYLTTEKLKQKPIDAPKRILITGGKMTKSLQLARSFYQAGHTVFLVETHKYWLSGHRTSQAVSKFYTVATPEKDPETYRQDLLNIVKKEQINVFIPVCSPVSSYYDSTAKPLLQKAGCEVIHFDPDITAMLDNKYEFCKKARELGLSAPKVFRFTSPQQVLDFDFQADGSQYIIKSINYDSVRRLDLTKLPFDGMEDYISKLPITEENPWVMQEFIKGQEFCTHSTVRDGKIQVHCCSKSSPFQVNYEQVNNPEILAWVSHFVKELKLTGQISFDFIQTPDGTIYPVECNPRTHSAITMFHDHPDLPAAYLEDNNHPQPISPLPESKPTYWLYHELWRLTEIRSRKDLKNWWQKISQGTDGIFRKDDPLPFLFVHHWQIPLLLLSTLKTFQDWLRIDFNIGKIVKLGGD
>NC_019780.1|WP_015228867.1|1159948_1160989_-|ATP-grasp-enzyme,-D-alanine-D-alanine-ligase
MSSLRVLHLAGSSVSEFYYNLSMIYAQKVLQPKGVSSYYAIVHPQGVWQLGSALDDLSPKLSLQEMIRQLPEIDVVIPHLFCFPGMTSFRGFFEDLLGLPIVGSPSHCTALASNKAQTRNVVEAMGVKVAKGQAVRSGDTVTMKPPFIVKPNSEDNSLGLTLVKSEDELAAALNKGFEFDETLLVEDYIPGRELRVGVIERDGELFVPRSMIEYIFPENHPIRTVHDKYDLQADGTPGRQPEKPVAKPQCPAEVTPDLWEKIATAAKKAHIALGCRDYSLFDFRIHEITNEPYLLEAGLFWSFGEISMISRMLLADGENLEDVVFEIWNNASQKTRVAHGSLYLSV
>NC_019780.1|WP_156800679.1|1159650_1159863_-|hypothetical-protein
MWFGSRESGIGNRGRWGRWGRWGRKIAPLSPLSPLSPLSPLSPLSPLSPLSPLSPLSPLLIGVGLSPNLL
>NC_019780.1|WP_015228866.1|1157919_1159659_+|ABC-transporter-ATP-binding-protein
MAHSRLQKLISYLRPHRKRMLMGIGALLAVNLLSAGIPLLIRDSVDQSFESNLFWYYVGAIILLASLMWGLRMLSRIWIFGVGRKVEYDLKQNIFEHLLRLEPAYFAMNTSGDLINRATSDVDNVRRLVGFAVLSLVNTVFAYGITLPFMLSIDVRLTLLAIAPYPFILVAVQLFSHNLSAQQQEVQENLSDISQLIQEDMSGISLIKIYAQEDNERQAFSEKNQRLLRSNLRLARTRNILFPVIEGLASLSLLFLLGIGSRGISGGDITNGDFVALIIYAQRLVFPIALLGFTITAYQRGAVSVDRVEAIFNAKPQIEDNTEAISLPMETVKGHLEAKGLTYTYPNAEKPALSDVNFTIQPGEVVAVVGSIGAGKSTLANSLPRLLDIGEGQIFLDGYDITKIQLSDLRRAIAYVPQDSFLFSMTVGNNIAYGDPYADSSFIETSAKEAQIHPEILNFPRKYETIVGERGITLSGGQRQRTSLARALLIDAPVLILDDALSSVDNRTATDILSNLSTGVEGKTVIFITHQLSAAAQADRLLVMDQGKIVQSGSHQELLQQEGLYKSLWQQHKLEEVLK
>NC_019780.1|WP_015228865.1|1156845_1157859_-|glycosyltransferase-family-4-protein
MVLFSLCFLGFALSLVTVAFLKRRFGQLLLDIPNDRSSHTQPTPRGGGLGFIIAFATTCAIALFLSFSLQCSDFRLNLTAQQWLFFSLPLIPLTIVGIIDDRQGVKASIRYLVQMLSAGIAVSLFHPFPQPWLNSFGNVGTIVAFLLTVIAFTAFINFYNFMDGLDGLVAGVTMVQMSFLAIYLHEPFLWVFVAALMGFLWWNWSPAQIFMGDAGSTVLGATISLSLLAPDLDAKTGWSAIAVILPLVGDAIYTLVRRLLRQENIFQAHRTHLYQRLQKQGWSHQQVALAYMMLTALSAVLIGFWGLFGAGITVLLVIASIALGEVVLLKPLSMSKS
>NC_019780.1|WP_015228864.1|1156556_1156832_+|helix-turn-helix-domain-containing-protein
MNKNLTPARIVTPGKILNRELEARNWTKDDLADKMGYPLESIETILNGDKEITTEIANDLSKTLEISSEVWINLETNYRSYLAKKASPIKN
>NC_019780.1|WP_015228863.1|1155903_1156503_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MIPTVIETSGRGERAFDIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYLYINSPGGSVSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMIHQPLGGAQGQATDIEIQAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESMEYGLIDRVIERRPSASNPPT
>NC_019780.1|WP_015228861.1|1154918_1155293_-|hypothetical-protein
MQLTQKQGLGQNQLAIIKSFGIWCFTLTVCFLVVGFPLVAVITAITSVFAIALQSLLPVSAVLLVASSVIGINIGAIFLIAAGLTLKGIHPQEVSWLRWLHGKGSLKQTAQFAACPITCGLVKQ
>NC_019780.1|WP_015228871.1|1165735_1166770_-|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MVAERILPTFQPQPAQISHEEGLILYEDMILGRLFEDKCAEMYYRGKMFGFVHLYNGQEAVSSGVIKAMRQNEDYVASTYRDHVHALSAGVPAKEVMAELFGKETGCSKGRGGSMHLFSAEHNLLGGYAFVAEGIPVATGVAFQSKYRREVLKNPNADQVTACFFGDGATNNGQFFECLNMAALWKLPILFVVENNKWAIGMAHDRATSQPEIYKKASVFGMEGVEVDGMDVLAMYSTAQEAVARARAGEGPTLIEALTYRFRGHSLADPDELRPPEEKETWMARDPIKKLEAYLLEQDLATKQELSDIEAKVQKEIDEAVEYAESSPEPDPEALRRYIFAEDE
>NC_019780.1|WP_015228872.1|1166968_1169029_+|DUF4101-domain-containing-protein
MHIPLDYYRIIGLPLQATAEQIEQAYQDRLRQTPHSELSQGTLEARKSLLDSAYEVLSDPEQRSEYDANYLLSTYDVEGEETVALPQIQREEEAAAVAAHTPRIEVETPQQLLATLLILYELGEYQRVRDLGEEMLAHPDRPEGEELSPPMQGDLILILALSCWELGREFWRQEEYEAAGEAVGKGHQLLWDWDLFYQLRSEMGAELDKLCPYRIFELLSQRDFKENAIPRAIELLQGMFEKRGGIDGELPDDSGLNVDEFLHFVQQIREYLTTSEQEELFGAEVQRPSGVAMYLAGCASLARGFAYLEPYSVVKAQGLFRQLETSHSSKGDRADVYLEESICALLLGETEQAIELMEKSQETDSIEQIQTYAAQAEESPDLLLGLCQYAKQWLESFLFPKFLDVANQKANLKDYFASESVQQTLESFQGEEIPSPEPETTFSPPPDFHRDRSPNTSPDRKHSSSWEDRRSHRRRKKPLRFQSRTSRIIGLILLTGVGLSVIALVLFGFYQGVSALWSTLVNPNSNRSERSSIALELNAPPVAIPTPQSSEDDARSTLNRAIGEQIVRTWLSSKAQALGSQNQASALAEILTDPLLSSWELRSQTFENNNTYQQFRHSVTIESVSYAAENPDQGEVIATVREVAKYYRNGNQIPSQSYDSTLRVRYDVVRQDKNWRIEDITVIEEL
>NC_019780.1|WP_015228873.1|1169174_1170578_+|NAD-dependent-malic-enzyme
MTKLTPNASYSLAIELSYPNQPGMLAQITSAIAQAGGNLGDILLESQTLNLIQRRLIVDAYSSEQGEAIVQALRGIPEVNILTVCDRTFELHRGGKIRIQSRIPVKSQSDLAMAYTPGVGRICRSIAQNPETVYSLTIKANTVAVVTDGSAVLGLGNLGAAGALPVMEGKALLFKEFADIDAFPICLDTQNPEEIITAVKQIAPVFGGINLEDISAPRCFEIEQRLKQALDIPVFHDDQHGTAIVVSAALFNALSLVKKALAEVKIVINGAGAAGIAIGRLLKQAGANPDQIMLCDSKGIISSQRDHLSTEKQEFAVKANGSLADAMKNADIFIGVSVPGIVTPEMVSSMAVEPIIMAMSNPIPEIQPELVADQVAVMATGRSDYPNQINNVLAFPGIFRGALNCRASGITVEMCLEAARSIASLISPEELNPNYIIPSVFDERVVTAVTEAVEKTATKEGITLYHA
>NC_019780.1|WP_015228874.1|1171013_1171295_+|hypothetical-protein
MSKTTEITLQLPTELLETTEALIKAGKANSLDEVITQALQHEINQLKSEQPSFNSSNDFNNDPIWQLGKKPIAIDITDASENLDQYLYNTFCN
>NC_019780.1|WP_156800870.1|1171445_1172909_+|hypothetical-protein
MALIALVNLGLVCIDISYIPFRNFYLKEFRLLVQGLNYIPKSEFIEKYTPILIEGYRQIPDSFLEQTPLLAQGYDYVKGIKPHPETEEYLQTVEILKQQVTKTGLASYQTQRILEDLRQQSLEIIQNNPFEVANKTGTLETIKDRMRNQVGVNSANQAFQEFWTSDYLIQNEYEKQIQFFDQKINSLIETNYLRGIDPETGEFIDRFWLLDLPFVILFAIEFTGRTYLIHRRHIGLRWIDGMMWRWYDVFLFFPIFRWLRIISVTTRVDQSDLINLESVKRQISQGFVASIAEDITEIVFVRLVNQLQGSLRRGELKKVISEANTKQYIDLNDTNEVAELSKLFVQLAVYQVLPKIRPDVEAIVRHNVRKVLETSPAFQGLRQVPGLERFESQLTEQFVTLVYQVIYDAIIGALEEDPEAEKLIEELGTNLTTVLTDEMQGKQTIEKMQSLLLDLLEEVKVNYVERLSEEDVEELLEQTRRLRQGYK
>NC_019780.1|WP_015228876.1|1173087_1173879_+|YdcF-family-protein
MFLFLSKFLPLFVYPLGLTTLLLLGGLILAWKRPQLALLPMGISVIVIFLAGNAWVSSLLVQSLEWQQIPKKELPEAEAIILLGGSTRVPTPPRKTVEITEAGDRVLYAAHLYKEGKAPLIIATGGRITWLKNSPPEADSMKILLTEIGVPEEAVIEEKQALNTYQNAVYTKEILEQRGIKKSLLVTSASHMPRSMLVFKKQDINVIPAPTDFTVTQLDWEQLQSTPQVTILNLIPDAGRLQQTTQALKEYIGIVVYWLKGWI
>NC_019780.1|WP_015228877.1|1173875_1174502_-|Uma2-family-endonuclease
MTIATNHIIPQQPLTFDQFFDRYGDDNRYELIDGEVFDLESNGRHEEVAALITAKICVEIEKKGLPWFVLQRGLLRPFNASLTAFRPDVAVVDRNELTKEPLWLDQSILTLGNSIKFVAEVVSNNWQNDYARKVEDYAVLGIPEYWIADYFGLGGTRHIGKPKQPTLSICTLVDGDYQIQQFRGNQSIISPTFPNLKLTAEQILSVGG
>NC_019780.1|WP_015228878.1|1174905_1175253_+|nickel-type-superoxide-dismutase-maturation-protease
MELPDISVREFLLWILGKRKRFRVKGNSMLPLLKPEEEVLIDRGCYQDSLPKVGEIVVAKHPTKSDLQLIKRVTLVSENGSCFLMGDNPEESTDSRQFGKVNREQIIGRVTCRFG
>NC_019780.1|WP_015228879.1|1175357_1177646_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MDAMSSTRALLYALKTPTEYNTPLPQWLKDCIEIANDPNQDNEDVALIADAFQFAYELHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDTEVTCEEIEERFGESVRHLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLKPEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYLEPEAFQEIRELVADRRTDREKRIQTVTEALQKRFDQGGIEVEELKGRPKHLYGIYQKMQQQQKTFAEIYDLAGVRVILKTREDCYRALAIIHDEFKPIPGRFKDYIGLPKPNRYQSLHTTVIGGYGKPIEMQIRTLEMHYIAEYGIAAHWLYKETGGTSDFKFTAEDEKFTWLRQLLEWQNDLKDAQEYIESIRDNLFEDDVFVFTPQGDVVALSRGATPVDFAYHIHTEVGNHIKGARVNGSWTVLDTALKNGDIVEIITSKNSHPSLDWLNFVVTPSARNRIRQWYKRSHREENITRGRSMVEKVVGKSGSDSLFKSDRMQRVAERCNHQSVDDLLAAVGYGEITTNSVASKLREESLQEEAVEKTDEIGNLEEETIQSLPTTTSRNNHHGTTSKAPIAGVEGLMYHRAGCCSPLPGEPIVGVVTRTKGVSIHRQDCSNVENTESDRVIPVDWNPTNGNGRAPTYTVDLEIEVIDRVGIFRDILARLSDQHINLSNASVKTGKGKPALISVSMEVKDHQQMQYCFNQIKQMSDVLKLRRVHHSHE
>NC_019780.1|WP_015228880.1|1177844_1178207_+|heterocyst-frequency-control-protein-PatD
MLPLSYRERYQRFLETLKQLQETLDQEGDQVTRKSLFSQLQQQFQGEIMSLKGETLTGETFSRWQSSQTEVHRIMRLLQNDMMFLQTSRNNDTFQKRLATVRDRVGKLIDFATAFTQNDD

Crispr_ID: NC_019780_12

• CRISPR_ID: NC_019780_12
• CRISPR_location: 1310124-1310218
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_12

Consensus_repeat	Method
CACGAAACCCAACATTTAACATGTAGCAATG	CRISPRCasFinder

spacers of NC_019780_12

>12.1|1310155|33|NC_019780|CRISPRCasFinder
ATGTTGGGTTTCACTTCGTTTCACGCAACCTAC

CRISPR arrays and Neighbor proteins around NC_019780_12

CRISPR arrays

The CRISPR arrays of NC_019780_12

>merge|NC_019780|12|1310124-1310218|CRISPRCasFinder
CACGAAACCCAACATTTAACATGTAGCAATGATGTTGGGTTTCACTTCGTTTCACGCAACCTACCACGAAACCCAACATTTAAGATGTAGCAATG

>NC_019780|12|12|1310124-1310218|CRISPRCasFinder
CACGAAACCCAACATTTAACATGTAGCAATG	ATGTTGGGTTTCACTTCGTTTCACGCAACCTAC
CACGAAACCCAACATTTAAGATGTAGCAATG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein	unknown	unknown	gnl|CDD|223840
NC_019780.1|WP_015228987.1|1304713_1305730_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|180962
NC_019780.1|WP_015228986.1|1302987_1304421_-|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl|CDD|234757
NC_019780.1|WP_156800684.1|1309262_1309403_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228984.1|1301711_1302059_-|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl|CDD|234669
NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase	unknown	unknown	gnl|CDD|227924
NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase	unknown	unknown	gnl|CDD|131779
NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NC_019780.1|WP_015228983.1|1300527_1301706_+|DNA-cytosine-methyltransferase	unknown	unknown	gnl|CDD|223348
NC_019780.1|WP_015228990.1|1307458_1309144_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_019780.1|WP_015228989.1|1306828_1307410_+|Restriction-endonuclease-BglII	unknown	unknown	gnl|CDD|370355
NC_019780.1|WP_051017369.1|1305865_1306822_+|site-specific-DNA-methyltransferase	unknown	unknown	gnl|CDD|334588
NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|235514
NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl|CDD|239248
NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl|CDD|236020
NC_019780.1|WP_015228985.1|1302085_1302991_-|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl|CDD|237553
NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein	unknown	unknown	gnl|CDD|130221
NC_019780.1|WP_083874378.1|1309620_1309962_+|hypothetical-protein	unknown	unknown	gnl|CDD|366192
NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein	unknown	unknown	gnl|CDD|212109

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein	gnl|CDD|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	1.54948e-80
NC_019780.1|WP_015228987.1|1304713_1305730_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|180962	PRK07403, PRK07403, type I glyceraldehyde-3-phosphate dehydrogenase.	0
NC_019780.1|WP_015228986.1|1302987_1304421_-|UDP-N-acetylmuramate--L-alanine-ligase	gnl|CDD|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NC_019780.1|WP_015228984.1|1301711_1302059_-|YbaB/EbfC-family-nucleoid-associated-protein	gnl|CDD|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	3.11608e-29
NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase	gnl|CDD|227924	COG5637, COG5637, Predicted integral membrane protein [Function unknown].	2.99624e-60
NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase	gnl|CDD|131779	TIGR02732, Zeta-carotene_desaturase, 9,9'-di-cis-zeta-carotene desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.	0
NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	4.08695e-99
NC_019780.1|WP_015228983.1|1300527_1301706_+|DNA-cytosine-methyltransferase	gnl|CDD|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	3.87517e-78
NC_019780.1|WP_015228990.1|1307458_1309144_-|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	5.3505e-22
NC_019780.1|WP_015228989.1|1306828_1307410_+|Restriction-endonuclease-BglII	gnl|CDD|370355	pfam09195, Endonuc-BglII, Restriction endonuclease BglII. Members of this family are predominantly found in prokaryotic restriction endonuclease BglII, and adopt a structure consisting of an alpha/beta core containing a six-stranded beta-sheet surrounded by five alpha-helices, two of which are involved in homodimerization of the endonuclease. They recognize the double-stranded DNA sequence AGATCT and cleave after A-1, resulting in specific double-stranded fragments with terminal 5'-phosphates.	3.79625e-29
NC_019780.1|WP_051017369.1|1305865_1306822_+|site-specific-DNA-methyltransferase	gnl|CDD|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.59053e-48
NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'	gnl|CDD|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein	gnl|CDD|239248	cd02950, TxlA, TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.	5.47774e-71
NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl|CDD|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NC_019780.1|WP_015228985.1|1302085_1302991_-|UDP-N-acetylmuramate-dehydrogenase	gnl|CDD|237553	PRK13905, murB, UDP-N-acetylmuramate dehydrogenase.	1.97013e-150
NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein	gnl|CDD|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NC_019780.1|WP_083874378.1|1309620_1309962_+|hypothetical-protein	gnl|CDD|366192	pfam00610, DEP, Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP). The DEP domain is responsible for mediating intracellular protein targeting and regulation of protein stability in the cell. The DEP domain is present in a number of signaling molecules, including Regulator of G protein Signaling (RGS) proteins, and has been implicated in membrane targeting. New findings in yeast, however, demonstrate a major role for a DEP domain in mediating the interaction of an RGS protein to the C-terminal tail of a GPCR, thus placing RGS in close proximity with its substrate G protein alpha subunit.	4.68629e-21
NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein	gnl|CDD|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0

Protein sequences

>NC_019780.1|WP_083874378.1|1309620_1309962_+|hypothetical-protein
MRTAIELIEEDTPILSRSENLETIVEAIRNTPGLIRDNRHKLRTYPRSIVGTELVDWLYHYINCSRESAIEVGQLLLDRGWLHHTWDEHDFKDEHLFYRFYQDEKFSLPLITG
>NC_019780.1|WP_156800684.1|1309262_1309403_+|hypothetical-protein
MLKKSIGWLSKARGKRQKASCLRQVALGKRQVALGKRQVALGLIDR
>NC_019780.1|WP_015228990.1|1307458_1309144_-|dihydroxy-acid-dehydratase
MSENLRSKAITQGTQRTPNRAMLRAVGFGDEDFTKPIVGLANGFSTITPCNVGINDLALRAEAAFKQAGAMPQMFGTITISDGISMGTEGMKYSLVSRDVIADSIETVCNGQSLDGVLAIGGCDKNMPGAMIAMARLNIPSIFVYGGTIKPGHYQGEDLTIVSAFEAVGQHSAGKIDEAHLTEIERRACPGAGSCGGMFTANTMSSAFEVMGMSLPYSSTMAAEDAEKADSAAKSAFALVEAIRKQILPSQILTRKAFENAISVIMAVGGSTNAVLHLLAIANTIGVDLTLDDFATIRDRVPVICDLKPSGRFVITNLHNVGGIPLVMKMLLEHDLLHGEALTITGETIAEILEDVPSQPATDQEVIRQWENPLYPQGHLAILKGNLATEGAVAKISGVKTPKITGAARVFESEEDCLDAILAGKIQEGDIVIVRYEGPKGGPGMREMLAPTSAIIGAGLGDSVGLITDGRFSGGTYGMVVGHVAPEAAVGGNIALVEEGDTITIDSYARSLHLHVSDEELAQRRKNWQPPSPRYPRGVLAKYAKIVSSSSLGAVTDLNLV
>NC_019780.1|WP_015228989.1|1306828_1307410_+|Restriction-endonuclease-BglII
MIVAGEYSFNGGKEKLESDFSEHLREIKEVIKQCDSSLCKKKKSKEKTKQGQILYSPKCLNDQFARCFQEKSWGSYRIPCSYSSSYYTSNYQPQNSMDHKNAYREMDFIKGKVGVEVQFGKYSFMVYNVCAKMTIFSKKAGIKAGVEIVPIKDLAVQMSTGVSYFEQIVWDLEQRGVSNIDIPVLIIGIMVAE
>NC_019780.1|WP_051017369.1|1305865_1306822_+|site-specific-DNA-methyltransferase
MFDHSNQKVINHRTYIEPFDILISNTDIAKFIKTVPDESIDLIVTSPPYNIGKVYENRRKIDEYLEFYQAIIQECYRILKPSGSICWQVGNYVEKGEIYPLDIFFYSRFKDLGLKLRNRIIWHFGHGLHSKKRFSGRYETVLWFTKSDHYTFNLDAVRVPSKYPGKKHYKGSKRGLPSGNPLGKNPSDFWEFIASEFDQALWDIPNVKSNHPEKTEHPCQYPIELVERLVLALTEEGEVVFDPFMGVGSSLLAGLIHQRKVIGVDLEKRYVELAEERIYNLLSGNLKKRDLGKSVYQPKGTEKVCMKPDEWKQNQLWD
>NC_019780.1|WP_015228987.1|1304713_1305730_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MIRVAINGFGRIGRNFLRCWLERENTGLEVVGLNDTSDPKTNAHLLKYDSMLGNLKAEITHDEDTITVNGKTIKCCSDRNPLNLPWDSWNIDLVVESTGVFTSEEKASQHIAAGAKKVLITAPGKGGNVGTYVVGVNHEEYDHDKHNVVSNASCTTNCLAPVVKVLHENFGVVKGMMTTTHSYTGDQRILDASHRDLRRARAAAVNIVPTSTGAAKAVALVIPELEGKLSGIAMRVPTPNVSVVDFVAQVEKPAIAEQVNEVLHHAAENSMKGIIQYTELPLVSSDYKGNDSSSIVDGSLTMVMNGDMVKVIAWYDNEWGYSQRVVDLAEVVAQKWKS
>NC_019780.1|WP_015228986.1|1302987_1304421_-|UDP-N-acetylmuramate--L-alanine-ligase
MSCNNSIDLNGKPFHFIGIGGIGMSALAYILAKRQVPVAGSDLRSSQITERLEKLGAYIFSSQEGKNLDYFRENPISPITQCNQTPQVICSTAIHPDNSEYQAAIDRGCPMFHRSDVLAALVAEYESIAVAGTHGKTTTSSLLGYVLLEAGVDPTVVVGGEVAAWGGNARVGEGRYLVAEADESDGSLVKLQPSIGIVTNIELDHPDHYQSLADVVDIFQTFAQNTKTLIGCIDCETVRSTLQPEITYSLDLKTGADYTVTNIHYQGKGTTATVWEQGTLLGEISLKLLGSHNLSNALAVIATARKIGIEFEAIKKSIGRFTGAKRRFEVYGEENSILFVDDYAHHPSELIATLTGAKLQIESKEAKRLVAIFQPHRYSRTEAFLQEFATAFSAADLVILTDIYSAGEAPTEINGAKLAKIMAEHHPKVIYHQNLSTLSQELETLLQPGDIALFLGAGNLNQIIPETMARLTEQKAA
>NC_019780.1|WP_015228985.1|1302085_1302991_-|UDP-N-acetylmuramate-dehydrogenase
MTLYLPETNCLLQSEVSLAPFTSLRVGGTAQWYVAPKNSEQLQETLQWAQQEQLPITFLGAGSNLLISDRGLSGIVISARYFRNLDINEEAATITASAGMPLATVAWKAAKRGWSGLEWAVGIPGTVGGSVVMNAGAHGACMSETLTQVVVATDNGNLETLTPEALAFRYRTSNLQNHPRWVMEATFQLQPSYSPEKITTKTRANLNQRRHSQPYDKPSCGSVFRNPQEQAAGWLIEQTGLKGYQVGGAQVAHRHANFILNQGQATAQDIYNVIQHVQEKVEQQWSVFLRPEVKLLGEFSN
>NC_019780.1|WP_015228984.1|1301711_1302059_-|YbaB/EbfC-family-nucleoid-associated-protein
MNEKQQGFGFGLGKMKELKEAFAKAQQVQQGAQELQQELEEMNIEGQSSDGLVKVIMSGNQEPRNVEISPEAAEKGAEELSQLVTEAVKDAYENSTATMREKMEALTSGLQLPEM
>NC_019780.1|WP_015228983.1|1300527_1301706_+|DNA-cytosine-methyltransferase
MKNKFIDLFSGAGGMSCGLEMAGFECLLGVDSDPIAIQTFQLNHKNAETIVGDLREISVETIQQAIGKQKIDLVCGGPPCQGFSTIGQNNHQDQRNFLFWEFLRIIKSLKPDYVIMENVTGLLSRKNEVTLNVILESFTQIGYKVDIKVLSAHHYGVPEKRRRTILLANRFQVKNLYPEILFSNEEEARTVAWALENLITDQGDIFNHDIEQAQITNSLEKKRLSYIPEGGSVRYEKDQKKYLPPELWFDINWEQLLERRFREAKLRRLDRATSAGTINTSRTTYYHPTENRYLTAREVAAIQSFPANFIFCGTVTQQWRQIGNAVPPLMAKAIGQGILNLDQQKENMETTIEIPKIDEIRAEAFTYRKPKNKKSDSLQLKLLAKGSTVVDP
>NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein
MDIQQVSSVVKKTLTTVEENKETATQTGVSVTIHGHFYQPPRENPYLEAIERQKSAEPFHDWNERIHYQCYRPNVFARVLNEQGEIIDIINNFEYLSFNIGPTLMSWLERYDLEVYQKIIEADRISCQRLNGHGNAIAQPYNHAILPLANQADQLTQIRWGKIDFQSRFGREPEGMWLPETAVDYATLETLIAENIRFIILSPSQAQRCRPLPTGNDPSPQYWQEVGGSQINPSRPYRCYVTESDFIDIFFYDGPISADMGFHNVLNTSQYFAERLRQAIQGDHRPSQLINVATDGETFGHHKPGTEKCLAYAFTREFPARRWQVSNYGHYLSENPPRWEVMIKPMTSWSCSHGVERWRSHCGCGGSEQSQQYWRKPLRESLDGLRDRLIEIFEQEGKKLFIDIWDARNDYINVIRDYTSVTSFLSRHSNHPLSPQEQIEALRLLEMQRNALLMFTSCGWFFEELSRPEGVQILRYASRAMNLAEKVCGESLELEFMKRLAAAPSNSERFKNGAEIYHHLVKPARITVEQITAHYALSSLFQLHPQQDHHYAYYVTQQDYQRQTIGALTLAMGELKMQRRNTGETDHLVFAVLHLGGWDFHCCVQSFPGRTAYTMALESIFTTFKQGSAAKTILAMKDHFGEQSLGLENLFVEKRMEIMQQLAQQTKTRLHELYTQIDRDNYSILVAFHQDEIPVPRELQVAAEIALSQRCLKGLQELEQVEDETASRNEVLGELEAIVTEAKGLQLSLEISEGKKILERLTLRSLWHLLHDCPDDATIGDYTRRLIELGHLLGVGIMLDRCQELYYHWLQTFARDQLSPELQPLLQLGLDLAVDVRPWLKQFD
>NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein
MENNVIENIYFAQQNRQDYLRELLERGRKLAEAKEYQEATRIYRQAARLDGDNARIFSGLGYLEARQGNYKAAAWAYRRAINLEPNNAEFYYALGHTLAKIQDYSAASTAYHRSTELAPKKVPAYLGLGAVLLRQNDRAGAISVYEKLLEIEPNHPEANAVIGSLLVQQGNYPRAIAHLEKVIKIAPETTAAWLDLTTAYQQQGKFPFALKTIETFLQRYPNHSRGYYQKGKLLQQYGEINAAASAYKQAINLDSQSIEALIALGEVQLKQEQYADAVNTYQRLKQFVPDNPAIYYNLGLALKGRDRVREARKAFQTAYQLFTEVQNQEGKDRSQMQLRNL
>NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein
MKLLDRPRLGLAVALAKTVTAIVKKLRLGAASVLPGEIARRFHPKLLSLLCEQVQSGIILIVGTNGKTTTSLLLRTILEANGAKVTHNATGANLVNGLITALLADTNIFGKLNADYAILEVDENIVPLLVKECQPQIILGLNLFRDQLDRYGEVDTINQKWQEAITPLSETTTVILNADDPSLSYLGQNLPQTVLFFGLNQPNLYLEEIPHAVDSIYCPVCGASLTYQGVYLSHLGDYHCSSCGFAKSNLDINSKEWGQILVGVYNKYNTLAAVLTAQTLNISPQLIKREIQNFRAAFGRAEELNVKGKQVRILLSKNPVGMNETIRTVNEIKAQGKSETTLLVLNDRTPDGTDVSWIWDVDTEKLVEKGGTIVISGDRVYDLALRIQYSQQTLNNPNLNLIIKENLKQAIDIALKSTPPDQTLHILPTYSAMLEVRQILTGRKIQ
>NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein
MATLNPNSTQQTAQRFTLDNGITLIVIENPTADIIASRLYFKNAGTRVESTSQAGVSHLLSTVITKGTENLKAAEIAEKIEAVGAGLNAESANDYFAMSLKTVSQDFSEMLQLVGEMIRFPSLPETEIELEQSLTLQNIIAQKEQPFNLAFNQLRSQMYPEHPYGTSVLGTEATVSSLTRADLKTYHETYFRPDQLIISIAGRITLKQAIEEVSAVFGDWKRPTTNFPTPTLPPLTPQPSEKFLSQNTQQTIIMLGYLSASIQDADYPVLKLINTYLGNGLSSRLFVELREKQGLAYDVSAFYPTRLEPSHFVTYIGTAPDNVEIALKGLKKEVQRLCEVQLTAEELQASKNKLLGQYALAKQSNGQLAQLYGWYETLNQGVEFDDRFQDMIAGVTSEEMQTVAHKYLQIEPYLSLVGSNSAS
>NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase
MRVAIVGAGLAGLSTAVNLADAGWEVEIYESRPFVGGKVGSWVDQDGNHLEMGLHVFFGCYYHLFSLMEKVGAIEHLRLKQHTHTFVNEGGKLGELDFRFLTGAPFNGLKAFFTTSQLSTVDKMANSLALGTSPIVRGLVDFKGAMKTIRDLDKISFADWFRSHGGNDGSLQRMWNPIAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHQPIINYLEAKGAKIYTRRRVREVLYEESDGETRVKGLAIANGEATETITADAYVAACDIPGIKRLLPETWRKWSAFDNIYKLDAVPVATVQLRFDGWVTELQDDKKRKQLQEATGLDNLLYTPDADFSCFADLALTSPSDYYREGEGSLLQLVLTPGDPFIKETNSTIAHHVLSQVHQLFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPDQKTPVTNFFLAGSYTQQDYIDSMEGATISGERAAKVILKESRRLGETTV
>NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase
MSNWLEHSVEIEVNAPIDLVWSLWSDLEQMPKWMKWIDSVEVLADDPDLSRWKLATGGWEFSWLSRITKLVPEQIIQWESVDGLPNKGAVRFYDRKTSSIVRLSVAYSIPGILGQIMDSLFLGQAVESTLQADLDRFRDYIDQVSSSHH
>NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein
MTNNWSDTTTLSTRVRNLLIALGAIAISITIFLGLQTDTPSLSLEAQAEEATSLEVALRSEKPTFLEFYANWCTSCQAMAKDIGELKQTYGDRVNFVMLNVDNDKWLPEMLQYDVSSIPHFAFLDQEGKPIASVIGEQPRSILDRNLQALAQNETLPYESKQGARSSLESAKPTPSSKSEVEPRTHGR
>NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein
MTTTLQQQQSQNIWERFCQWVTSTNNRLYVGWFGVLMIPTLLTATTCFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIAFHFLIGIFCYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGALFSAMHGSLVTSSLVRETTENESQNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVINTWADVLNRANLGFEVMHERNAHNFPLDLAAGESTPVAMQAPEING
>NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MNLDFRNVNTLWSSVLVETLSRLGIKTAVVCPGSRSGPITTAFARHPEIEAIPILDERSGAFFALGKGKITGSPVALVCTSGTAGANFYPAVIEARESGVPMLVLTADRPPELRHCHSGQTIDQQKLYGSYPSWYAELGLPSEERQQLRYLRQTLVQAVARSRFPFPAAVHLNIPFRDPLAPTPHSVQRVLSDFDGFFSHLVPPESPLIEQVLPWETWKRCDRGIIIAGVDQPLAVEEYCRSIAHLANCLGWVVLAEGLSPVRNHAHLIPNLISTYDFILREEAIANTLIPEMVIQIGAFPTSKILRSWLQEISPPSWVLTTGGDNFDPLHRSTLPLHTTFSAICQDNPTVVPLSSYQKQWLTLEQKTREKLDRKLSNTREIIEPKTAWLLSQTLPKNTPCFIANSLAVRDVEWFWQPNSRGIYPLFNRGANGIDGTLSTALGIAHQGKSAVCLTGDLALLHDTNGFLIHQQLRGHLTIILVNNNGGGIFEMLPISQFDDVFEDYFATPQTINFAALCDTYGIEYITIKTWQELEALLNPLPQQGIRILEIVTDRQQSKQWREHIINLNVAH
>NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'
MLKSPVSPIVSANKASYNPHLTSKWVEVLVDCPDIEGLLTYRLPSDVSVQPGDVLNVPLRNQIVGGIAIRLRSSLPPDLSEDKIKEVETVVSESLFPSHYWELLEQIAQYYCTPLLSVIRTALPPGLLGKSQLRIRLKPEAIPTGAETFCSPVAASVLRRLQSQKIGEYSAIYLRNKIKGAQRGINELMRRGWVESYLQQPQPSRPKQQKAVLLVGDSPDLTSRQREVLEMLRRRGGELWLTELLQACSTTSSTVSALEKKGCVVIQAQERLRFAETPTQEVDRAKVLNNAQQNALDTILGITGYSEVLLHGVTGSGKTEVYLQAIAPRLNSGESVLLLVPEIGLTPQLCDRARARFGTQVCIYHSGLSTGERYDTWRQMLTGEPQVVIGTRSAIFAPLPQLGMIILDEEHDSSFKQNQRLPTYHARTVAKWRSKLENCPLILGSATPSLESWETQTRPSPQKIYLSLPERVYSRPLPPVSIVDMRKELQQGNRSIFSQPLQTALQQLKATRKQGILFIPRRGHSTFVSCRSCGYVIECPHCDVSLSYHYTHEGATQTLRCHYCNHTQMQPPQCPACGSPYLKHFGTGTQRVKQALDQEFPELRALRFDSDTTRTKGAHRSLLNQFTNYEADLLVGTQMLTKGLDIAEVTLVAVVSADGVLHRSDYMAAERAYSTLAQVAGRAGRGDDPGVVIIQTYSPEHPVIEALRTHDYQRFAQAELENRQAYHYPPYGKLILLNLSGLDALEVQQTATMLADVCREMTGENQAEILGPAPASIMRIARRYRWQILLKYPPSVGENILTELMELYALCPKGVSLKIDVDPLDMG

Crispr_ID: NC_019780_13

• CRISPR_ID: NC_019780_13
• CRISPR_location: 1326336-1326457
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_13

Consensus_repeat	Method
GTGACAACCCAACATCAATCATT	CRISPRCasFinder

spacers of NC_019780_13

>13.1|1326359|14|NC_019780|CRISPRCasFinder
TATTTGTAGGTTGG
>13.2|1326396|39|NC_019780|CRISPRCasFinder
TTTCTGAAATCCCCCCTAGCCTCAGTAAGGGGAGAATCA

CRISPR arrays and Neighbor proteins around NC_019780_13

CRISPR arrays

The CRISPR arrays of NC_019780_13

>merge|NC_019780|13|1326336-1326457|CRISPRCasFinder
GTGACAACCCAACATCAATCAAGTATTTGTAGGTTGGGTGACAACCCAACATCAATCATTTTTCTGAAATCCCCCCTAGCCTCAGTAAGGGGAGAATCAGTGACAACCCAACATCAATCAAT

>NC_019780|13|13|1326336-1326457|CRISPRCasFinder
GTGACAACCCAACATCAATCAAG	TATTTGTAGGTTGG
GTGACAACCCAACATCAATCATT	TTTCTGAAATCCCCCCTAGCCTCAGTAAGGGGAGAATCA
GTGACAACCCAACATCAATCAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229007.1|1331243_1333397_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229001.1|1326488_1327313_+|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl|CDD|236569
NC_019780.1|WP_015229004.1|1328659_1329415_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229005.1|1329419_1330232_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_051017288.1|1328387_1328660_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl|CDD|239248
NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase	unknown	unknown	gnl|CDD|227924
NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase	unknown	unknown	gnl|CDD|131779
NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein	unknown	unknown	gnl|CDD|223840
NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NC_019780.1|WP_015229009.1|1334741_1336097_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|274350
NC_019780.1|WP_015229008.1|1333681_1334800_+|hypothetical-protein	unknown	unknown	gnl|CDD|225060
NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein	unknown	unknown	gnl|CDD|212109
NC_019780.1|WP_015229003.1|1328016_1328322_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl|CDD|236020
NC_019780.1|WP_051017370.1|1327766_1328051_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197775
NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|235514
NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein	unknown	unknown	gnl|CDD|130221
NC_019780.1|WP_051017371.1|1330372_1331239_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229001.1|1326488_1327313_+|nucleoside-triphosphate-pyrophosphohydrolase	gnl|CDD|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.09021e-124
NC_019780.1|WP_015229009.1|1334741_1336097_+|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	3.04532e-09
NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein	gnl|CDD|239248	cd02950, TxlA, TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.	5.47774e-71
NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase	gnl|CDD|227924	COG5637, COG5637, Predicted integral membrane protein [Function unknown].	2.99624e-60
NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase	gnl|CDD|131779	TIGR02732, Zeta-carotene_desaturase, 9,9'-di-cis-zeta-carotene desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.	0
NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein	gnl|CDD|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	1.54948e-80
NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	4.08695e-99
NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein	gnl|CDD|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	5.3505e-22
NC_019780.1|WP_015229008.1|1333681_1334800_+|hypothetical-protein	gnl|CDD|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	0.00944492
NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein	gnl|CDD|212109	cd10797, GH57N_APU_like_1, N-terminal putative catalytic domain of mainly uncharacterized prokaryotic proteins similar to archaeal thermoactive amylopullulanases; glycoside hydrolase family 57 (GH57). This subfamily of mainly uncharacterized bacterial proteins, shows high sequence homology to GH57 archaeal thermoactive amylopullulanases (APU, E.C 3.2.1.1/41). Thermoactive APUs are type II pullulanases with both pullulanolytic and amylolytic activities. They have an acid pH optimum and the presence of Ca2+ might increase their activity, thermostability, and substrate affinity.	0
NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl|CDD|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NC_019780.1|WP_051017370.1|1327766_1328051_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.55799e-10
NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'	gnl|CDD|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein	gnl|CDD|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0

Protein sequences

>NC_019780.1|WP_015229000.1|1323790_1326274_+|primosomal-protein-N'
MLKSPVSPIVSANKASYNPHLTSKWVEVLVDCPDIEGLLTYRLPSDVSVQPGDVLNVPLRNQIVGGIAIRLRSSLPPDLSEDKIKEVETVVSESLFPSHYWELLEQIAQYYCTPLLSVIRTALPPGLLGKSQLRIRLKPEAIPTGAETFCSPVAASVLRRLQSQKIGEYSAIYLRNKIKGAQRGINELMRRGWVESYLQQPQPSRPKQQKAVLLVGDSPDLTSRQREVLEMLRRRGGELWLTELLQACSTTSSTVSALEKKGCVVIQAQERLRFAETPTQEVDRAKVLNNAQQNALDTILGITGYSEVLLHGVTGSGKTEVYLQAIAPRLNSGESVLLLVPEIGLTPQLCDRARARFGTQVCIYHSGLSTGERYDTWRQMLTGEPQVVIGTRSAIFAPLPQLGMIILDEEHDSSFKQNQRLPTYHARTVAKWRSKLENCPLILGSATPSLESWETQTRPSPQKIYLSLPERVYSRPLPPVSIVDMRKELQQGNRSIFSQPLQTALQQLKATRKQGILFIPRRGHSTFVSCRSCGYVIECPHCDVSLSYHYTHEGATQTLRCHYCNHTQMQPPQCPACGSPYLKHFGTGTQRVKQALDQEFPELRALRFDSDTTRTKGAHRSLLNQFTNYEADLLVGTQMLTKGLDIAEVTLVAVVSADGVLHRSDYMAAERAYSTLAQVAGRAGRGDDPGVVIIQTYSPEHPVIEALRTHDYQRFAQAELENRQAYHYPPYGKLILLNLSGLDALEVQQTATMLADVCREMTGENQAEILGPAPASIMRIARRYRWQILLKYPPSVGENILTELMELYALCPKGVSLKIDVDPLDMG
>NC_019780.1|WP_015228999.1|1321710_1323429_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MNLDFRNVNTLWSSVLVETLSRLGIKTAVVCPGSRSGPITTAFARHPEIEAIPILDERSGAFFALGKGKITGSPVALVCTSGTAGANFYPAVIEARESGVPMLVLTADRPPELRHCHSGQTIDQQKLYGSYPSWYAELGLPSEERQQLRYLRQTLVQAVARSRFPFPAAVHLNIPFRDPLAPTPHSVQRVLSDFDGFFSHLVPPESPLIEQVLPWETWKRCDRGIIIAGVDQPLAVEEYCRSIAHLANCLGWVVLAEGLSPVRNHAHLIPNLISTYDFILREEAIANTLIPEMVIQIGAFPTSKILRSWLQEISPPSWVLTTGGDNFDPLHRSTLPLHTTFSAICQDNPTVVPLSSYQKQWLTLEQKTREKLDRKLSNTREIIEPKTAWLLSQTLPKNTPCFIANSLAVRDVEWFWQPNSRGIYPLFNRGANGIDGTLSTALGIAHQGKSAVCLTGDLALLHDTNGFLIHQQLRGHLTIILVNNNGGGIFEMLPISQFDDVFEDYFATPQTINFAALCDTYGIEYITIKTWQELEALLNPLPQQGIRILEIVTDRQQSKQWREHIINLNVAH
>NC_019780.1|WP_015228284.1|1320492_1321575_+|photosystem-II-q(b)-protein
MTTTLQQQQSQNIWERFCQWVTSTNNRLYVGWFGVLMIPTLLTATTCFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIAFHFLIGIFCYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGALFSAMHGSLVTSSLVRETTENESQNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVINTWADVLNRANLGFEVMHERNAHNFPLDLAAGESTPVAMQAPEING
>NC_019780.1|WP_015228998.1|1319791_1320358_+|thioredoxin-fold-domain-containing-protein
MTNNWSDTTTLSTRVRNLLIALGAIAISITIFLGLQTDTPSLSLEAQAEEATSLEVALRSEKPTFLEFYANWCTSCQAMAKDIGELKQTYGDRVNFVMLNVDNDKWLPEMLQYDVSSIPHFAFLDQEGKPIASVIGEQPRSILDRNLQALAQNETLPYESKQGARSSLESAKPTPSSKSEVEPRTHGR
>NC_019780.1|WP_015228997.1|1319291_1319741_+|polyketide-cyclase/dehydrase
MSNWLEHSVEIEVNAPIDLVWSLWSDLEQMPKWMKWIDSVEVLADDPDLSRWKLATGGWEFSWLSRITKLVPEQIIQWESVDGLPNKGAVRFYDRKTSSIVRLSVAYSIPGILGQIMDSLFLGQAVESTLQADLDRFRDYIDQVSSSHH
>NC_019780.1|WP_015228996.1|1317780_1319238_+|9,9'-di-cis-zeta-carotene-desaturase
MRVAIVGAGLAGLSTAVNLADAGWEVEIYESRPFVGGKVGSWVDQDGNHLEMGLHVFFGCYYHLFSLMEKVGAIEHLRLKQHTHTFVNEGGKLGELDFRFLTGAPFNGLKAFFTTSQLSTVDKMANSLALGTSPIVRGLVDFKGAMKTIRDLDKISFADWFRSHGGNDGSLQRMWNPIAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHQPIINYLEAKGAKIYTRRRVREVLYEESDGETRVKGLAIANGEATETITADAYVAACDIPGIKRLLPETWRKWSAFDNIYKLDAVPVATVQLRFDGWVTELQDDKKRKQLQEATGLDNLLYTPDADFSCFADLALTSPSDYYREGEGSLLQLVLTPGDPFIKETNSTIAHHVLSQVHQLFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPDQKTPVTNFFLAGSYTQQDYIDSMEGATISGERAAKVILKESRRLGETTV
>NC_019780.1|WP_015228995.1|1316344_1317616_+|insulinase-family-protein
MATLNPNSTQQTAQRFTLDNGITLIVIENPTADIIASRLYFKNAGTRVESTSQAGVSHLLSTVITKGTENLKAAEIAEKIEAVGAGLNAESANDYFAMSLKTVSQDFSEMLQLVGEMIRFPSLPETEIELEQSLTLQNIIAQKEQPFNLAFNQLRSQMYPEHPYGTSVLGTEATVSSLTRADLKTYHETYFRPDQLIISIAGRITLKQAIEEVSAVFGDWKRPTTNFPTPTLPPLTPQPSEKFLSQNTQQTIIMLGYLSASIQDADYPVLKLINTYLGNGLSSRLFVELREKQGLAYDVSAFYPTRLEPSHFVTYIGTAPDNVEIALKGLKKEVQRLCEVQLTAEELQASKNKLLGQYALAKQSNGQLAQLYGWYETLNQGVEFDDRFQDMIAGVTSEEMQTVAHKYLQIEPYLSLVGSNSAS
>NC_019780.1|WP_015228994.1|1314985_1316326_+|Mur-ligase-family-protein
MKLLDRPRLGLAVALAKTVTAIVKKLRLGAASVLPGEIARRFHPKLLSLLCEQVQSGIILIVGTNGKTTTSLLLRTILEANGAKVTHNATGANLVNGLITALLADTNIFGKLNADYAILEVDENIVPLLVKECQPQIILGLNLFRDQLDRYGEVDTINQKWQEAITPLSETTTVILNADDPSLSYLGQNLPQTVLFFGLNQPNLYLEEIPHAVDSIYCPVCGASLTYQGVYLSHLGDYHCSSCGFAKSNLDINSKEWGQILVGVYNKYNTLAAVLTAQTLNISPQLIKREIQNFRAAFGRAEELNVKGKQVRILLSKNPVGMNETIRTVNEIKAQGKSETTLLVLNDRTPDGTDVSWIWDVDTEKLVEKGGTIVISGDRVYDLALRIQYSQQTLNNPNLNLIIKENLKQAIDIALKSTPPDQTLHILPTYSAMLEVRQILTGRKIQ
>NC_019780.1|WP_156800873.1|1313192_1314218_-|tetratricopeptide-repeat-protein
MENNVIENIYFAQQNRQDYLRELLERGRKLAEAKEYQEATRIYRQAARLDGDNARIFSGLGYLEARQGNYKAAAWAYRRAINLEPNNAEFYYALGHTLAKIQDYSAASTAYHRSTELAPKKVPAYLGLGAVLLRQNDRAGAISVYEKLLEIEPNHPEANAVIGSLLVQQGNYPRAIAHLEKVIKIAPETTAAWLDLTTAYQQQGKFPFALKTIETFLQRYPNHSRGYYQKGKLLQQYGEINAAASAYKQAINLDSQSIEALIALGEVQLKQEQYADAVNTYQRLKQFVPDNPAIYYNLGLALKGRDRVREARKAFQTAYQLFTEVQNQEGKDRSQMQLRNL
>NC_019780.1|WP_015228991.1|1310374_1312909_+|DUF3536-domain-containing-protein
MDIQQVSSVVKKTLTTVEENKETATQTGVSVTIHGHFYQPPRENPYLEAIERQKSAEPFHDWNERIHYQCYRPNVFARVLNEQGEIIDIINNFEYLSFNIGPTLMSWLERYDLEVYQKIIEADRISCQRLNGHGNAIAQPYNHAILPLANQADQLTQIRWGKIDFQSRFGREPEGMWLPETAVDYATLETLIAENIRFIILSPSQAQRCRPLPTGNDPSPQYWQEVGGSQINPSRPYRCYVTESDFIDIFFYDGPISADMGFHNVLNTSQYFAERLRQAIQGDHRPSQLINVATDGETFGHHKPGTEKCLAYAFTREFPARRWQVSNYGHYLSENPPRWEVMIKPMTSWSCSHGVERWRSHCGCGGSEQSQQYWRKPLRESLDGLRDRLIEIFEQEGKKLFIDIWDARNDYINVIRDYTSVTSFLSRHSNHPLSPQEQIEALRLLEMQRNALLMFTSCGWFFEELSRPEGVQILRYASRAMNLAEKVCGESLELEFMKRLAAAPSNSERFKNGAEIYHHLVKPARITVEQITAHYALSSLFQLHPQQDHHYAYYVTQQDYQRQTIGALTLAMGELKMQRRNTGETDHLVFAVLHLGGWDFHCCVQSFPGRTAYTMALESIFTTFKQGSAAKTILAMKDHFGEQSLGLENLFVEKRMEIMQQLAQQTKTRLHELYTQIDRDNYSILVAFHQDEIPVPRELQVAAEIALSQRCLKGLQELEQVEDETASRNEVLGELEAIVTEAKGLQLSLEISEGKKILERLTLRSLWHLLHDCPDDATIGDYTRRLIELGHLLGVGIMLDRCQELYYHWLQTFARDQLSPELQPLLQLGLDLAVDVRPWLKQFD
>NC_019780.1|WP_015229001.1|1326488_1327313_+|nucleoside-triphosphate-pyrophosphohydrolase
MNPIETATKESILSALNDLIDVVARLRSPDGGCPWDLAQTQQTLIPYIIEEAYEVAAAIRRDNQEEIVEELGDYLLQVVLQSQIAAESGDFTLEEVAQGITDKLIRRHPHVFGDVEVKDASEVRKNWEEIKAKEKGYDPKQVEKLSQNLKKYTETLPPLYASLKISQKVAKLGFEWKDEQGVWDKFEEELSEFKASLSTNDVAHQQSELGDILFTLVNIARWYGFDPSEALQGTNERFVQRLSVMEDLAENSLSEYSLEELEMLWQTAKQRLKG
>NC_019780.1|WP_051017370.1|1327766_1328051_+|helix-turn-helix-transcriptional-regulator
MDDIDAISWSLIVRELRQRLNLSQERLAQQLGVSFQTVNRWETGKVNPSPMATQLIKKTLIDLGKDGQDLLDQYLILMEMGDSYAGGTRRSFVK
>NC_019780.1|WP_015229003.1|1328016_1328322_+|hypothetical-protein
MQVELEEVLLNKGELKRWVELDSFRYNALVYYVIILSLIETPETERKGELNASIQAFGDRDLSPFLEILFKLLLFLVELLKLQEFLKKEGKTSRLLTYSLM
>NC_019780.1|WP_051017288.1|1328387_1328660_+|hypothetical-protein
MSLNDRATVLEALKITKQNLIQALKTDRFAVDLASMRSLHIQEQSSEYGKLLNEALQIGVSLQDELEGKMFKASSEKDVNLDNLEDEKSE
>NC_019780.1|WP_015229004.1|1328659_1329415_+|hypothetical-protein
MGIIYIGDRETGKTNLAMELANPDHQYVQVNSPDYEELKRLLYSEEKGGTRATPSEQATIERNLEIQVQLPTGNKQVMLDWIDTPGEIWRKSWQADNPTEWENFLETIKESQGVLLIIPPYRELLKPGIDVPEDNFITKEQWCNRFRRWLDFFRLDCPNAKHLLICLSMADLFCDPKQEAKKLAYHPYNSKLNWQQRNEYVYKKYFRPIQSDIKKLNQSISGLSVRCFITSIYNRELLELPWIYLGSFLAV
>NC_019780.1|WP_015229005.1|1329419_1330232_+|hypothetical-protein
MGNICVIGPRRSGKTTYLAALAYWPDKTETNQVEIQPLNDESRNLADKAENIIRQGSTVEPTRVEEVGSVDDLPYYSFNIEAKLSFWSKKESIQLNARDYPGEIFEKIAEPNLADSFHEEFIDECLMNDVTGCLILLTAWEGSNDNFYDRVMGKFLELMDMRDRGDNLRLAIALSKCERGELWPGRIDPETELFKRYLPRMTNTLRKKMSPKNLRFYAISTFGVLARNDPRPNRIDEIGLNRRASTLRDERNWKPYNMIPPLYWLSGGKA
>NC_019780.1|WP_051017371.1|1330372_1331239_+|hypothetical-protein
MDQEATLRLVGDRKSGKTAYMASLAYWPNADPKSPVQNVNPVGDEATQLINQAQNILEQGLQLEPTPLAASADEVKDYTLSISLKDQFSWKTPTATLKNQLLQLNISCKDYPGEFFSDLLQKIGDPLLDDYLEDCLQATGILLLLDGTAHKKDSQYAMGIDQFLTQLDQTDIGGIQRRVAMVINKCEQSELWINRYKPRDLASKRFPNVYRKLESWSRMGGGQVDCFTTSAFGMLGSRYPEPNAKKIERDRGGTRSIIKKPKQWRPFGLVAPIYWLCTGVRHKELDQG
>NC_019780.1|WP_015229007.1|1331243_1333397_+|hypothetical-protein
MTTAKVITIHEFSTGIQAQRTEDGNWVSQGFTGKYMNTTLDPIPSIVRKAISNRLFAVAEGKSRNEPALIGREITENNQTWSVIAVVSKGIDDGGRSASMYRYFLSKGKNQLTPILRWLFTVKKDYVFNPFDYQEIGQPHYVDRNKNSPPLDKTDHLIELAAREAPIIIASDDQTIKPLILNSLAAKKAEENGYPIAWAYQVEALEKPRSFQVIYPASAKAEQILRNSLASNPNAPVFIANEQDINTAIKTIFRKGKIELEQLLTLERALQNPQITEEYWQGLFNGQGADQALKSGIYSAQMVRLLALQAAILPATLPKVLGWLEKREKNEEEKKLFIDFQKQVRKILARTNPESEFLALKQQVIEGVRLLIPSVIKQPNLLKPTVSLLKPQNGLWGHFYHYHVKQEIDRDLTTAPQIRGYQPNAVFTLSAEPLWEELFQNIKSTWERNRVSPKEEYLPLAEFFEQVSYYPASALFYHIAWGEVPREVFDACSGRGNHSRKQIYGVWVERHFTLLELILNQIVEIGGSIVPVYMFAPLLILSLLVGGIALPRAFNINLFSPNKSDLKEVKKQLEQLTEENRNLEQREKKLETQLGQIKFQEDLNKAVAKFDSQTRKSIQELLQEIPETSGKSETDKIIFLRKNIFNNDQLQAKAILEDNPQRQWKEEWVRAVYQYQQNNNLPTDGIITFFEDYRKQNGTTIYALYQDIKNSSKVPGG
>NC_019780.1|WP_015229008.1|1333681_1334800_+|hypothetical-protein
MRIYLYLLAGITSPLIGWNIAQFILTDAGFLTQFPELVLFPCVAISLAIGMVTNETFIGSPTKLKLGFRRLKIPILIAIGLGLILGLIAAGISQIFFLPQITLPTAITRSIGWLLIGIPVGLAEGLTWYWQSLEAGDPKRFRQRLLTSFLTAAIASLLAALIFEYLRNSFETIPIWFRQIEDILGFCLLGFLLGLGFSLTNSPSYMVALRAGSGFEYTNSLFDEELMDLQIDETDTEKTDIIPALNGKPRINTSRLKFVSDSELQDIEEGLSIQLPPRGKVIFGTQEDADIYIPNLPLFTAELELKPRETLLKVNPQYKKQIEINGERLGSKQTISLKHNDLITFYPKKQEDEDEEKMYRFVYYNRFLDPQA
>NC_019780.1|WP_015229009.1|1334741_1336097_+|VWA-domain-containing-protein
MKKKCTALFTTIASWIPRLSFSLALVTVIDAPSFAQVREIQEVEILGQPQVKEDEVTVRVKLQGKENKPVVPLTPDDFTLRARKQLSAQEWSDWNNLEKEEYWQTWKSPDEAVQVPVWMIFLLDFSGSMNREDRRGVEKFTGAINAIRSFNEFASENLEGNIQISVVPFGIGGNNCPIQPIDDEQLDRFLPVGDFKLTNYLDNLEKRSPCAATDIYSPLKKAIRFFSNPYDQRFSPNQTELSQENFQTEITEPQPQLAIILLSDGYHNAGNDQQNMDEVKQLLNENSNIIIHTLGYGLTPQQLGEKYKLGREANRADINRKIVQEGEFVDKNLLDSLAEITGGISSFSADADVIAQQLPLFLKALLGEYEITYTDPSGERGSTHEIQVGITSPKTEKMIYSQPKRYRITVFGRSLPLSTRLIILSLTLLTLGVGGVLPFYFWGKWLQKSEN

Crispr_ID: NC_019780_14

• CRISPR_ID: NC_019780_14
• CRISPR_location: 1409332-1409472
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_14

Consensus_repeat	Method
TTATGTAAAAAGTTTACTCATGGAAGCCCCCCAAACTTGGG	CRISPRCasFinder

spacers of NC_019780_14

>14.1|1409373|59|NC_019780|CRISPRCasFinder
GGGTTGGGGGGCAAAAACAATTTACGATTCATTTAGGATTGCTATAGCAGTTCTAAATC

CRISPR arrays and Neighbor proteins around NC_019780_14

CRISPR arrays

The CRISPR arrays of NC_019780_14

>merge|NC_019780|14|1409332-1409472|CRISPRCasFinder
TTATGTAAAAAGTTTACTCATGGAAGCCCCCCAAACTTGGGGGGTTGGGGGGCAAAAACAATTTACGATTCATTTAGGATTGCTATAGCAGTTCTAAATCTTATGTAAAAAGTTTACTCATGGAAGCCCCCCAAACTTGGG

>NC_019780|14|14|1409332-1409472|CRISPRCasFinder
TTATGTAAAAAGTTTACTCATGGAAGCCCCCCAAACTTGGG	GGGTTGGGGGGCAAAAACAATTTACGATTCATTTAGGATTGCTATAGCAGTTCTAAATC
TTATGTAAAAAGTTTACTCATGGAAGCCCCCCAAACTTGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl|CDD|223963
NC_019780.1|WP_015229090.1|1407973_1408225_+|gas-vesicle-protein-G	unknown	unknown	gnl|CDD|310007
NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|223702
NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein	unknown	unknown	gnl|CDD|224276
NC_019780.1|WP_015229089.1|1407229_1407967_+|Gas-vesicle-synthesis-protein-GvpL/GvpF	unknown	unknown	gnl|CDD|377652
NC_019780.1|WP_015229091.1|1408219_1408768_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239516
NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|274465
NC_019780.1|WP_015229083.1|1403726_1404458_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229088.1|1406715_1407186_+|gas-vesicle-protein-K	unknown	unknown	gnl|CDD|377462
NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein	unknown	unknown	gnl|CDD|223698
NC_019780.1|WP_015229085.1|1405718_1406060_+|XisI-protein	unknown	unknown	gnl|CDD|341357
NC_019780.1|WP_083874383.1|1405449_1405731_+|hypothetical-protein	unknown	unknown	gnl|CDD|370136
NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein	unknown	unknown	gnl|CDD|115718
NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|223872
NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein	unknown	unknown	gnl|CDD|372979
NC_019780.1|WP_015229086.1|1406130_1406523_+|gas-vesicle-protein	unknown	unknown	gnl|CDD|376379
NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein	unknown	unknown	gnl|CDD|370162
NC_019780.1|WP_015229078.1|1403405_1403624_+|gas-vesicle-structural-protein-GvpA	unknown	unknown	gnl|CDD|181805
NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein	unknown	unknown	gnl|CDD|226701

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein	gnl|CDD|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	3.91971e-54
NC_019780.1|WP_015229090.1|1407973_1408225_+|gas-vesicle-protein-G	gnl|CDD|310007	pfam05120, GvpG, Gas vesicle protein G. These proteins are involved in the formation of gas vesicles.	1.13751e-16
NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.60008e-123
NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein	gnl|CDD|223702	COG0629, Ssb, Single-stranded DNA-binding protein [DNA replication, recombination, and repair].	4.65851e-18
NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein	gnl|CDD|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.562e-33
NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein	gnl|CDD|115718	pfam07082, DUF1350, Protein of unknown function (DUF1350). This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.	1.18429e-111
NC_019780.1|WP_015229091.1|1408219_1408768_-|NUDIX-hydrolase	gnl|CDD|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	2.71945e-49
NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|274465	TIGR03169, selenide_water_dikinase_putative, pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.	0
NC_019780.1|WP_015229089.1|1407229_1407967_+|Gas-vesicle-synthesis-protein-GvpL/GvpF	gnl|CDD|377652	pfam06386, GvpL_GvpF, Gas vesicle synthesis protein GvpL/GvpF. This family consists of several bacterial and archaeal gas vesicle synthesis protein (GvpL/GvpF) sequences. The exact function of this family is unknown.	2.33464e-79
NC_019780.1|WP_015229088.1|1406715_1407186_+|gas-vesicle-protein-K	gnl|CDD|377462	pfam05121, GvpK, Gas vesicle protein K. These proteins are involved in the formation of gas vesicles.	7.20955e-31
NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein	gnl|CDD|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.29032e-17
NC_019780.1|WP_015229085.1|1405718_1406060_+|XisI-protein	gnl|CDD|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	2.90075e-45
NC_019780.1|WP_083874383.1|1405449_1405731_+|hypothetical-protein	gnl|CDD|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	1.01981e-36
NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	9.54005e-63
NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein	gnl|CDD|372979	pfam14249, Tocopherol_cycl, Tocopherol cyclase. This family contains tocopherol cyclases. These enzymes are involved in the synthesis of tocopherols and tocotrienols (vitamin E).	0
NC_019780.1|WP_015229086.1|1406130_1406523_+|gas-vesicle-protein	gnl|CDD|376379	pfam00741, Gas_vesicle, Gas vesicle protein.	4.44107e-15
NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein	gnl|CDD|370162	pfam08865, DUF1830, Domain of unknown function (DUF1830). This family of short proteins is functionally uncharacterized.	5.56716e-38
NC_019780.1|WP_015229078.1|1403405_1403624_+|gas-vesicle-structural-protein-GvpA	gnl|CDD|181805	PRK09371, PRK09371, gas vesicle structural protein GvpA.	4.76313e-27
NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein	gnl|CDD|226701	COG4250, COG4250, Predicted sensor protein/domain [Signal transduction mechanisms].	1.2471e-53

Protein sequences

>NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNEKQKVNCAVALGSNLGDCQETLKQAILQLEKVPEITIDAVSSWYETRPIGPSQPNYINGCILLTTNLSPFELLDILLTTETNFGRVRQERWGARTLDLDLILYGDLVLDTPRLKLPHPRMREREFVLVPLAEIASHWIDPITKNSIAQLKNKIDCSGILQKL
>NC_019780.1|WP_015229091.1|1408219_1408768_-|NUDIX-hydrolase
MFNNDPSPQLLKERLHYAGRKFSFEVSYLRLPNGVEGEWECIRHPGGSLAVPVTPEGKLILVDQYRIPLKQRLLEFPAGTVEAYEEPAETIKRELEEETGYHGNKWQDLGKFPLAPGYSDEYIYVFLATELEKLENPPEQDEDEDITIVLYTPEELEQLIHSGENKLDAKTITSYYLARPFL
>NC_019780.1|WP_015229090.1|1407973_1408225_+|gas-vesicle-protein-G
MVFKLLLLPITGPIEGITWLGEQILERADQELDSKENLNKRLLSLQLSLDLGEISEEEYDEQEEEILLAMQAMEDEENEEEES
>NC_019780.1|WP_015229089.1|1407229_1407967_+|Gas-vesicle-synthesis-protein-GvpL/GvpF
MTEGFYLYGIFPPPGPKTIETQGLDKQPIFSHTVEGFTFLYSEAQQSRYLASRRNLITHTKVLEEAMENGSRTLLPLQFGLIVPDWETVVQDLLQHQAESLHFFLEKLEGKREVSLKIYWETNAELNALLEENPALKARRDNLEGKQLSMDEVIQIGQALEQEMEGRKQDIISRFEEVLIPFAFEIKENDVLTETMIYNTAFLINWDAESDFGEQLEAIDAEFSPRLKIRYNNFTPPYNFVELRE
>NC_019780.1|WP_015229088.1|1406715_1407186_+|gas-vesicle-protein-K
MSEEESNLSRVDLNPASSNSDAGLAPLLLTVTELIRQLMEAQVIRRMDAELLTEAELDRAGESLQRLEEEILRLCEIFDVDPADLNVHLGELGTLLPKEGGYYPGETSDQPSILELLDRVLHTGVVIDGNLDLGIAQLNLIQAKLHLVLTSQPINN
>NC_019780.1|WP_015229086.1|1406130_1406523_+|gas-vesicle-protein
MVNSNTNQPKSYQSKGITNSTQSSSLADILERVLDKGIVIAGDISVSVGSTELLTIRIRLLISSVDRAREIGINWWESDPYLSSQAHLMKEENQALQSRLENMEAELRRLKGETNLDQSSLGESDQRSLQ
>NC_019780.1|WP_015229085.1|1405718_1406060_+|XisI-protein
MDNLSHEDLEKAVTNVLRDYIEFLGNDPDSNIELIIDKDKTHYLLVEMGWQNDRRIYGNLIHIEIINNKIWIQQDGTEEGIANELVKQGISPQQIVLAFKTPERRKIADFAIS
>NC_019780.1|WP_083874383.1|1405449_1405731_+|hypothetical-protein
MAAEKGADKIAVEIKSFRSASEMKDLEEAIGQFVLYERLLARYEPERKLYLAVPKNVIKSVFEEEAGQVLLEDQILRLLTFDTTKEEVFRWIT
>NC_019780.1|WP_015229083.1|1403726_1404458_+|hypothetical-protein
MVSLREQWNEQARERQREISARKTEIEEARSSIQKELQAQYEARLAATQQLQSELRQFYNNLANDTAGFLERTRTTREQMAQKLEQELTQLITDLENNTAALLQEANQERVRVSQQQKALAIELKNQLAQFHEQLETSVGNWRQETQEQQQQTAAQLREDLNAFSANLMAQVEKLLINLEETRTANAQQQREALFNFRRQLTVDVWGETESDSLKVEENTPSDVWGETESDFLEVEENTPFVT
>NC_019780.1|WP_015229078.1|1403405_1403624_+|gas-vesicle-structural-protein-GvpA
MAVEKTNSSSSLGEVVDRILDKGVVVDLWVRVSLVGIELLAVEARVVIASVETYLKYAEAVGLTSSAAVPAE
>NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase
MSQDILLIGGGHSHAILLQKWQDHNINQIHLKLISDTEQAPYSGMLPGHVAGLYSYEETHIDLRRLTKLAAAEFYQDQAIGLDLKQKQILCRNRSPIPFDKVSLDIGSTPTITSIPSAKDYAIPAKPVPIFLENWYQFLATVEANPNQSRNLAIVGGGAGGVELALNMQQRLQKNSNSITIHLFQRGKELLPQQGKWVRKHLSNLLQKRGIKLHLGEAVNAVFPDRIVCESGYNLDTDIVFWVTQASAPQWIAESGLTIDERGFILVNEYLQSVSHPFVFAAGDIATIKNHPRPKAGVFAVRQGKPLFQNLQRTILGKPLKPYHPQKHYLSLIGTGDKSAIASWGNFGFHSPLLWHWKDRIDRQFMAQFSRNH
>NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein
MAQILDPVPNTPSDPIVCCYLNATSSIQVIRITNLENWYFERVVFPGQHLMFEALPEGILEVHTGMMASAILSDQIPCFRLAVKEKEAEIDVEQIKSESAIAVVA
>NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein
MTQKILYVRLPCNPIFPIGVVYLADHIHKLFPEIEQRIFDMGTVAPLDFGASLEKCVDEYQPTLLVFSWRDIQIYAPVGGRGGNPLQYAFEFYYAKNPLKKLHGALGGMRVTAAYYGELWRNLGLIKRGLKRAKKYNPQARSIIGGGAVSVFYEQLEDKLPEGTIVSVGEGELLLEKLLRGENFQNERCYVVGETQPRDNMIHEAPTPLEKTACDYDYIERMWPEFKYYLQENDFYLGIQTKRGCPHNCYYCIYTVVEGKQVRVNPADEVVAEMRQLYNRGIRNFWFTDAQFIPAKKYIPDAIELLQKIYDSGMNDIHWAAYIRADNLTPELCDLMVKTGMNYFEIGISSGSQELVRKMRMGYNLRVVLQNCRDLRAAGYNELVSVNYSFNVLDERIETIRQTIAYHRALEEVFGVDKVEPAIFFIGLQPHTHLEEYALENDILKPDYNPMSLMPWTAKKLLWNPEPLGSLFGEVCLQAWENNPNDFGREVMAILEQRFGRADLEDALNAPMSGSVSHEKLPVTSNQ
>NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein
MLEGSILQKLYTAHQGTDRPLNLGVYYKNTLVALCHALEDFILNTKSSPLVISAFQQGKWYLEEADRYGEIANQARKIAIMAAPDSSFHEHPTGKRDNVDLVSLDAATDSVAQEWHLMICSPSYTAMVLCQELSEKDYGRNGQPKHDLERKFYGFWTFEPKLVQETIQLAINHIGNYNSPLEKELQQHFTEITEQFGKVETENTGVVVSQVVDYLQDSQAELLNQEQASIDQQNSYLPQSQDLDDNLLSNEMQAFLRMAQLIDQADINNPMAAAEVTALAETMGQVLDIPAWQQKRLRLASLLHRLVATLGSTAEKEEDHKTAPACDLIPSVEALRAMPQMSAIARLITHQTENWDGSGKPGQLAHDQIPLESRILSIVSYFQHRVNELRMNEKSLDQETTLNQAYSECQEQANTRFDPKLVEALGLLVMGLQQGMTLETAQPKIAAGMWLLDNQDNEQLITNQ
>NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein
MDIEAIRSGKIQALAGADLEDEILTKAHLEKVNLSGANLVGVDLSHANLQSAHLDGANLLGGNLNAADVRGSLVGVNLTQGNLEGTDLRGSNLRGANLMGANLSRVSLGGAFLSGANLSEANLQGGDLRSSDLRGVNFQGANLKGANLSEAQLQGADFSNANLEEADLRGANLAGVDLEGANLLCAELERANLEGANFKDTCLIGTEAES
>NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein
MTTTAFIGSCSQLNLNQSQPPSESSPDTPESAPSPNLDSNLESSSRPLERTPEDTNFVTKVVDEVSPAVVRVNVKRVVDTNVPEFFNSPFFERFFGDSIPTPPQQRVQQGLGSGFIVSSDGQILTNAHVVDKADQVAVVLRDGRTFDGTVVGEDPLTDVAVIQIDAENLPTVALGNSDQVQPGQWAIAIGNPLGLNETVTVGVISATGRPSSAIGVSDKRVEFIQTDAAINPGNSGGPLLNARGEVIAINTAIIGKAEGLGFAVPINTGKRVAQEIMETGEVQYPYIGIRMVTLTPEVKQRLEQLPQQNFTITADSGVLIVETVDGSPASKSRLRPGDVILAINGETVEQSEEVQRLVEQQSVGDQITVTIERNGETEEITVELERLPVEN
>NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein
MDKLQTPHSAYHWAGETDRFFEGWYYRVTLPEINQTFAFMYSIDDPAGGTAYSGGAAQILGPDDRYFWRTFPKVKGFWADYQRLGLGHWQKRPLGSFPRQLTPNQFNQQIEEGYQATATLNQGKLHDPTTGETVSWEYEIQPIYGWGDPNRPQKATAGWLSFLPLFEPGWQILIAHGRATGYIQWQGKTYQFTNAPAYSEKNWGRAFPAKWFWLNCNAFIDEPDLALTAGGGRREVLGLGEEVALICFHYQGKFYEFVPWHAEVSWEIQPWGEWKMTAIGAELKAEIVGQTDREGTLLRAPTETGLEFCCRDTMQGQVDLKLSNRSGEMIFEASSQNCGLEVGGIPWSGSWRNSS
>NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein
MLELYQFELSQYSEKVRFLLDYKGLEYRKIEVTPGMGQVEVYQMSGQRQVPVLKDGETVIPDSTDIAMYLERNYPERPLLPTASREKGLTLLMEEWADESIGLKSRKAFIGALNRNEALRTAVLPSDTPDFVKSIVSGIPSDLLDALGTGVGIGGEALKAIEGSLKQDLEALCLILQEQPYLTGATPTLADFSVASLSLLLKFPEKSYMDIPDQLAGKALPGIGDNPAFEPFFSWRDRLYSEYRQATVSTTTSSSSGNAPSSIEIE
>NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein
MNWEEVAGNSVLLPSQPKALIHFLGGAFVATAPQVTYSWLLEALAAEGYGIIATPFINDLNHSAIAQRALNRFETAYQRLGLFRRYLPIYGLGHSMGCKLHLLINSLYDVNRSGNLLISYNNYPARQAVPFVEQLNSLVEFDLEFTPSPERTYDLVRNDYKKTRTLLIRFQNDTIDQTQELKPILEERHPHLVSYLQLSGNHLTPVNPKEWNWQPGNNFSVLDAFGQWVKQQFYSDITQLKKEVLRWLDPINN
>NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein
MNSCILMAQITSQPQLRYTQENQTPLADMMVEFLGMRETDPPSSLKVVAWRDLANEVSQNYQEGDNVILEGRLRMNILERQEGFKEKRAEFTLSRIYRIQNGTSPTSPAQSQVPSQTNSNSGNVVQFPASQPETTESTQEEEKNLDDIPF

Crispr_ID: NC_019780_15

• CRISPR_ID: NC_019780_15
• CRISPR_location: 1419980-1420091
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_15

Consensus_repeat	Method
GTGAAGAGAAACGAAACCCAACATCAATTAGTC	CRISPRCasFinder

spacers of NC_019780_15

>15.1|1420013|46|NC_019780|CRISPRCasFinder
ATTAGTCATTGGAAAACCAAGAACAAAGGACAAAAATGTAGGTTGG

CRISPR arrays and Neighbor proteins around NC_019780_15

CRISPR arrays

The CRISPR arrays of NC_019780_15

>merge|NC_019780|15|1419980-1420091|CRISPRCasFinder
GTGAAGAGAAACGAAACCCAACATCAATTAGTCATTAGTCATTGGAAAACCAAGAACAAAGGACAAAAATGTAGGTTGGGTGAAGAGAAACGAAACCCAACATCAATTAGTC

>NC_019780|15|15|1419980-1420091|CRISPRCasFinder
GTGAAGAGAAACGAAACCCAACATCAATTAGTC	ATTAGTCATTGGAAAACCAAGAACAAAGGACAAAAATGTAGGTTGG
GTGAAGAGAAACGAAACCCAACATCAATTAGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229104.1|1420906_1422277_+|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl|CDD|234628
NC_019780.1|WP_041235376.1|1428332_1429139_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|184588
NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein	unknown	unknown	gnl|CDD|224276
NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein	unknown	unknown	gnl|CDD|223698
NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|274465
NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein	unknown	unknown	gnl|CDD|115718
NC_019780.1|WP_015229105.1|1422283_1423156_+|cobalt-ABC-transporter-permease	unknown	unknown	gnl|CDD|367052
NC_019780.1|WP_015229111.1|1429190_1430117_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|223654
NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|223872
NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|223702
NC_019780.1|WP_015229107.1|1424099_1425092_-|J-domain-containing-protein	unknown	unknown	gnl|CDD|182347
NC_019780.1|WP_015229113.1|1431456_1432506_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270372
NC_019780.1|WP_041235746.1|1430116_1430995_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|223646
NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl|CDD|223963
NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein	unknown	unknown	gnl|CDD|372979
NC_019780.1|WP_015229109.1|1427253_1428219_-|hydroxymethylbilane-synthase	unknown	unknown	gnl|CDD|234612
NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein	unknown	unknown	gnl|CDD|370162
NC_019780.1|WP_015229108.1|1425131_1427186_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|184038
NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein	unknown	unknown	gnl|CDD|226701

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229104.1|1420906_1422277_+|ribosome-biogenesis-GTPase-Der	gnl|CDD|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NC_019780.1|WP_041235376.1|1428332_1429139_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|184588	PRK14243, PRK14243, phosphate transporter ATP-binding protein; Provisional.	0
NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.60008e-123
NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein	gnl|CDD|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	2.562e-33
NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein	gnl|CDD|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.29032e-17
NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|274465	TIGR03169, selenide_water_dikinase_putative, pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.	0
NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein	gnl|CDD|115718	pfam07082, DUF1350, Protein of unknown function (DUF1350). This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.	1.18429e-111
NC_019780.1|WP_015229105.1|1422283_1423156_+|cobalt-ABC-transporter-permease	gnl|CDD|367052	pfam02361, CbiQ, Cobalt transport protein. This family consists of various cobalt transport proteins Most of which are found in Cobalamin (Vitamin B12) biosynthesis operons. In Salmonella the cbiN cbiQ (product CbiQ in this family) and cbiO are likely to form an active cobalt transport system.	1.8213e-29
NC_019780.1|WP_015229111.1|1429190_1430117_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	2.74953e-81
NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	9.54005e-63
NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein	gnl|CDD|223702	COG0629, Ssb, Single-stranded DNA-binding protein [DNA replication, recombination, and repair].	4.65851e-18
NC_019780.1|WP_015229107.1|1424099_1425092_-|J-domain-containing-protein	gnl|CDD|182347	PRK10266, PRK10266, curved DNA-binding protein.	4.17017e-58
NC_019780.1|WP_015229113.1|1431456_1432506_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	gnl|CDD|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.35692e-136
NC_019780.1|WP_041235746.1|1430116_1430995_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	5.923e-83
NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein	gnl|CDD|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	3.91971e-54
NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein	gnl|CDD|372979	pfam14249, Tocopherol_cycl, Tocopherol cyclase. This family contains tocopherol cyclases. These enzymes are involved in the synthesis of tocopherols and tocotrienols (vitamin E).	0
NC_019780.1|WP_015229109.1|1427253_1428219_-|hydroxymethylbilane-synthase	gnl|CDD|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	3.65947e-171
NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein	gnl|CDD|370162	pfam08865, DUF1830, Domain of unknown function (DUF1830). This family of short proteins is functionally uncharacterized.	5.56716e-38
NC_019780.1|WP_015229108.1|1425131_1427186_-|molecular-chaperone-DnaK	gnl|CDD|184038	PRK13410, PRK13410, molecular chaperone DnaK; Provisional.	0
NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein	gnl|CDD|226701	COG4250, COG4250, Predicted sensor protein/domain [Signal transduction mechanisms].	1.2471e-53

Protein sequences

>NC_019780.1|WP_041235745.1|1418851_1419613_+|DUF1350-domain-containing-protein
MNWEEVAGNSVLLPSQPKALIHFLGGAFVATAPQVTYSWLLEALAAEGYGIIATPFINDLNHSAIAQRALNRFETAYQRLGLFRRYLPIYGLGHSMGCKLHLLINSLYDVNRSGNLLISYNNYPARQAVPFVEQLNSLVEFDLEFTPSPERTYDLVRNDYKKTRTLLIRFQNDTIDQTQELKPILEERHPHLVSYLQLSGNHLTPVNPKEWNWQPGNNFSVLDAFGQWVKQQFYSDITQLKKEVLRWLDPINN
>NC_019780.1|WP_015229101.1|1417973_1418774_-|glutathione-S-transferase-family-protein
MLELYQFELSQYSEKVRFLLDYKGLEYRKIEVTPGMGQVEVYQMSGQRQVPVLKDGETVIPDSTDIAMYLERNYPERPLLPTASREKGLTLLMEEWADESIGLKSRKAFIGALNRNEALRTAVLPSDTPDFVKSIVSGIPSDLLDALGTGVGIGGEALKAIEGSLKQDLEALCLILQEQPYLTGATPTLADFSVASLSLLLKFPEKSYMDIPDQLAGKALPGIGDNPAFEPFFSWRDRLYSEYRQATVSTTTSSSSGNAPSSIEIE
>NC_019780.1|WP_015229100.1|1416688_1417756_-|hypothetical-protein
MDKLQTPHSAYHWAGETDRFFEGWYYRVTLPEINQTFAFMYSIDDPAGGTAYSGGAAQILGPDDRYFWRTFPKVKGFWADYQRLGLGHWQKRPLGSFPRQLTPNQFNQQIEEGYQATATLNQGKLHDPTTGETVSWEYEIQPIYGWGDPNRPQKATAGWLSFLPLFEPGWQILIAHGRATGYIQWQGKTYQFTNAPAYSEKNWGRAFPAKWFWLNCNAFIDEPDLALTAGGGRREVLGLGEEVALICFHYQGKFYEFVPWHAEVSWEIQPWGEWKMTAIGAELKAEIVGQTDREGTLLRAPTETGLEFCCRDTMQGQVDLKLSNRSGEMIFEASSQNCGLEVGGIPWSGSWRNSS
>NC_019780.1|WP_015229099.1|1415432_1416608_-|PDZ-domain-containing-protein
MTTTAFIGSCSQLNLNQSQPPSESSPDTPESAPSPNLDSNLESSSRPLERTPEDTNFVTKVVDEVSPAVVRVNVKRVVDTNVPEFFNSPFFERFFGDSIPTPPQQRVQQGLGSGFIVSSDGQILTNAHVVDKADQVAVVLRDGRTFDGTVVGEDPLTDVAVIQIDAENLPTVALGNSDQVQPGQWAIAIGNPLGLNETVTVGVISATGRPSSAIGVSDKRVEFIQTDAAINPGNSGGPLLNARGEVIAINTAIIGKAEGLGFAVPINTGKRVAQEIMETGEVQYPYIGIRMVTLTPEVKQRLEQLPQQNFTITADSGVLIVETVDGSPASKSRLRPGDVILAINGETVEQSEEVQRLVEQQSVGDQITVTIERNGETEEITVELERLPVEN
>NC_019780.1|WP_015229098.1|1414643_1415276_+|pentapeptide-repeat-containing-protein
MDIEAIRSGKIQALAGADLEDEILTKAHLEKVNLSGANLVGVDLSHANLQSAHLDGANLLGGNLNAADVRGSLVGVNLTQGNLEGTDLRGSNLRGANLMGANLSRVSLGGAFLSGANLSEANLQGGDLRSSDLRGVNFQGANLKGANLSEAQLQGADFSNANLEEADLRGANLAGVDLEGANLLCAELERANLEGANFKDTCLIGTEAES
>NC_019780.1|WP_015229097.1|1413229_1414624_+|sensor-protein
MLEGSILQKLYTAHQGTDRPLNLGVYYKNTLVALCHALEDFILNTKSSPLVISAFQQGKWYLEEADRYGEIANQARKIAIMAAPDSSFHEHPTGKRDNVDLVSLDAATDSVAQEWHLMICSPSYTAMVLCQELSEKDYGRNGQPKHDLERKFYGFWTFEPKLVQETIQLAINHIGNYNSPLEKELQQHFTEITEQFGKVETENTGVVVSQVVDYLQDSQAELLNQEQASIDQQNSYLPQSQDLDDNLLSNEMQAFLRMAQLIDQADINNPMAAAEVTALAETMGQVLDIPAWQQKRLRLASLLHRLVATLGSTAEKEEDHKTAPACDLIPSVEALRAMPQMSAIARLITHQTENWDGSGKPGQLAHDQIPLESRILSIVSYFQHRVNELRMNEKSLDQETTLNQAYSECQEQANTRFDPKLVEALGLLVMGLQQGMTLETAQPKIAAGMWLLDNQDNEQLITNQ
>NC_019780.1|WP_015229096.1|1411514_1413098_+|B12-binding-domain-containing-radical-SAM-protein
MTQKILYVRLPCNPIFPIGVVYLADHIHKLFPEIEQRIFDMGTVAPLDFGASLEKCVDEYQPTLLVFSWRDIQIYAPVGGRGGNPLQYAFEFYYAKNPLKKLHGALGGMRVTAAYYGELWRNLGLIKRGLKRAKKYNPQARSIIGGGAVSVFYEQLEDKLPEGTIVSVGEGELLLEKLLRGENFQNERCYVVGETQPRDNMIHEAPTPLEKTACDYDYIERMWPEFKYYLQENDFYLGIQTKRGCPHNCYYCIYTVVEGKQVRVNPADEVVAEMRQLYNRGIRNFWFTDAQFIPAKKYIPDAIELLQKIYDSGMNDIHWAAYIRADNLTPELCDLMVKTGMNYFEIGISSGSQELVRKMRMGYNLRVVLQNCRDLRAAGYNELVSVNYSFNVLDERIETIRQTIAYHRALEEVFGVDKVEPAIFFIGLQPHTHLEEYALENDILKPDYNPMSLMPWTAKKLLWNPEPLGSLFGEVCLQAWENNPNDFGREVMAILEQRFGRADLEDALNAPMSGSVSHEKLPVTSNQ
>NC_019780.1|WP_015229094.1|1410849_1411167_-|DUF1830-domain-containing-protein
MAQILDPVPNTPSDPIVCCYLNATSSIQVIRITNLENWYFERVVFPGQHLMFEALPEGILEVHTGMMASAILSDQIPCFRLAVKEKEAEIDVEQIKSESAIAVVA
>NC_019780.1|WP_015229093.1|1409676_1410798_+|pyridine-nucleotide-disulfide-oxidoreductase
MSQDILLIGGGHSHAILLQKWQDHNINQIHLKLISDTEQAPYSGMLPGHVAGLYSYEETHIDLRRLTKLAAAEFYQDQAIGLDLKQKQILCRNRSPIPFDKVSLDIGSTPTITSIPSAKDYAIPAKPVPIFLENWYQFLATVEANPNQSRNLAIVGGGAGGVELALNMQQRLQKNSNSITIHLFQRGKELLPQQGKWVRKHLSNLLQKRGIKLHLGEAVNAVFPDRIVCESGYNLDTDIVFWVTQASAPQWIAESGLTIDERGFILVNEYLQSVSHPFVFAAGDIATIKNHPRPKAGVFAVRQGKPLFQNLQRTILGKPLKPYHPQKHYLSLIGTGDKSAIASWGNFGFHSPLLWHWKDRIDRQFMAQFSRNH
>NC_019780.1|WP_015229092.1|1408788_1409283_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNEKQKVNCAVALGSNLGDCQETLKQAILQLEKVPEITIDAVSSWYETRPIGPSQPNYINGCILLTTNLSPFELLDILLTTETNFGRVRQERWGARTLDLDLILYGDLVLDTPRLKLPHPRMREREFVLVPLAEIASHWIDPITKNSIAQLKNKIDCSGILQKL
>NC_019780.1|WP_015229103.1|1420381_1420834_+|single-stranded-DNA-binding-protein
MNSCILMAQITSQPQLRYTQENQTPLADMMVEFLGMRETDPPSSLKVVAWRDLANEVSQNYQEGDNVILEGRLRMNILERQEGFKEKRAEFTLSRIYRIQNGTSPTSPAQSQVPSQTNSNSGNVVQFPASQPETTESTQEEEKNLDDIPF
>NC_019780.1|WP_015229104.1|1420906_1422277_+|ribosome-biogenesis-GTPase-Der
MKKLPIVAIIGRPNVGKSTLVNRFTGSRTAIVHDEPGITRDRLYQPSFWRDRDFLVVDTGGIVFDDDSEFLPEIRQQAMMALAEAVAAIFVVDGQEGITAADEEIGNWLRQQNVPYFLAVNKCESSEQGLIQAAQFWELGLGEPLPVSGIHGSGTGDLLDAVLSCFPPLDDLPDADETEINVAIIGRPNVGKSSLLNALTGVSRSIVSPISGTTRDAIDLQIEHQGQSYRLIDTAGIRKKKNISYGAEFFSINRAFKAIRRCDVSLLVIDALDSITDQDMKLAGRIEEEGKAAIIIVNKWDALEKDSTTIYKYEKMLRDRVYFMYWSEILFVSALNGQRVKTIFDSIQTAVKEHRRRVSTAVINEVIQEAVAWYSPPTSRQGKQGRIYYGTQVSSQPPTIALFVNDPKRFNDTYRRYIDRQFREQLGFQGTPLRLIWRGKRPREVEESKLNRATRV
>NC_019780.1|WP_015229105.1|1422283_1423156_+|cobalt-ABC-transporter-permease
MDLLRSLPIGLYLEKPDTWLHHLDSRIKLIWLMGFLLTPILANPVWRIGLVLFLILVTFLAKIPLRVWRQQMGWLLILCTLVFILTCIFDDGLTVQHQPRLPSSELILPQPTDYHYVLIDQAWLTVTRRSLDLAIRVSTIIFTLIYSTNLYLLTTAPEEITAALETFLKPLQRFNLPITEILLTLTLSLRFIPLVLEEIQNLIRSVSTRAINWKKLGIRKSLNLWFLVAEKLLENLLLRAEQIAIAMEVRGFTAPNEHDVQWHRLKLRGRDWLAVGGVVLFLGGRLIWGG
>NC_019780.1|WP_015229107.1|1424099_1425092_-|J-domain-containing-protein
MKNFPNYYEILDVSPDATVEEIKRAYRRLARRYHPDLNPGDKQAEETFKDLVEAYDVLCDPEQRARHDELINPKSAKGRRTKVAAGKTRRSAAKTGQNGRGFDRSTEESFWKKTQRPESRTSPQTSRRIPREEGNAYRPGTRKTAYKVEAEKTTSEKERPRDVEARLKLPLEKAYRGGKERIRLEDGRSLEIDMPSGMIDGQQMRLRGQGIAGGDLYLTITIAPHCFFKLKEKDVFCRVPVTPSEATLGSAIQVPTLDGWVEMAIPAGVKSGQRLRLASKGYPVEGERGDQLVEIQIVVPPQPSEEEKELYQQLKAVQSFNPRDSLLKSQ
>NC_019780.1|WP_015229108.1|1425131_1427186_-|molecular-chaperone-DnaK
MGRVVGIDLGTTNSVVSITEGGKPLVIANAEGTRTTPSVVSFNKDGELLVGQLARRQAVLNPQNTFFGVKRFIGRKYAELSPPSKRVPYTIRRDDEGNVKLRCPRLKKEFAPEEIAARILQKLVQDASRYLGEPVTEAVITVPAYFNDSQRQATRDAGRIAGLDVLRILNEPTAAALAYGLDQEEDSLVLVFDLGGGTFDVSILEVGDGVFEVKATSGDTQLGGNDFDEKIVNYLAEQFLETEGIDLRRDRQALQRLSEAAEKAKIELSGVGTTEINLPFITASENGPKHIETQLTRSQFEGLCGDLMQRLRRPLKRAFKDSGFRPGDIDEVVLVGGSTRIPMVQEMVRELIGREPNQNVNPDEVVAVGAAVQAGILAGEVKDVLLLDVSPLSFGIETIGGVMKKLIPRNTTIPVRRSDIFSTSENNQTMVEVHVLQGEREMAAENKSLGRFKLTGIPPAPRGVPQVLVSLDLDANGILNVTAMDKTTGREQSVTIQGASTLSESEINRMLKEAAENSRADQERKERVEKRNRAEALADSSQRRLKEVALDFGTQFASYYRRRIEALIEELREGLARDDERSIDRAQADLQDALYELNREVRLQYEDEDDDLFGSIKRTFLGDEEDDRVPPYRRETMNPRSRSRPRYEEDYYEDEFDRRPPRRSSRRRPYEYENDWDEEDDDWF
>NC_019780.1|WP_015229109.1|1427253_1428219_-|hydroxymethylbilane-synthase
MTATTTSCPKIVRIGTRKSNLAMVQTHWVRDELQKHFPDYQFEIEAMSTQGDKILDVALSKIGDKGLFTKELELGLLNQDVDLAVHSLKDLPTQLPEGLMLGCVSTRENPADALVLNQAYQGYTIQTLPEGAVVGTSSLRRLAQLRYHYPSLVFKDVRGNLNTRLKKLDAGEYDALVLAVAGLQRLGMGDRVSQAIPSEISLHAVGQGALGIECREGDTAILDLLKAIEDTETRDRTLAERAFLRELEGGCQVPIGVNSEINGDQLTLTGMVASLDGQQLLKDTVSADRSEVDQIGQELAQILRGKGAQAILDEIFAQIDR
>NC_019780.1|WP_041235376.1|1428332_1429139_-|phosphate-ABC-transporter-ATP-binding-protein
MEQTSTASDQGKDVVLKAENVNVYYGPTLAVQNVNMDIHANEVTALIGPSGCGKSTILRCFNRLNDLVAGARVEGKITHHGKDLYGKGVDPVEVRRRIGMIFQKPNPFPKSIYENIAFGARINGYQGNMDELVEQSLKQAALWDEVKDKLKESGLSLSGGQQQRLCIARGVAIQPEIVLMDEPCSALDPISTLRIEELINELKENYTIVIVTHNMQQASRVSDRTAFFNAQATEKGKQGYLVEYDQTETIFQNPSQEATQQYVSGAFG
>NC_019780.1|WP_015229111.1|1429190_1430117_-|phosphate-ABC-transporter-permease-PstA
MTTADPTPKNVSSNFNTDLSKRYQQGSIFRIVSMIATYIGLVVLAVLLIDVFIDGIRNLDWGFFSSYPSRKPEQAGFLSAWIGSIWLMVITAIVSFTVGVGSGIFLEEFAGESWYAKVIEINIGNLAAVPSIIYGLLGLQAFVRVMEPITGGRTVLAGSLTMSLLILPIIIVATREALKAVPDSLRQAGMALGATRWQVVREQVFPLAFPGMLTGTILALSRAIGETAPLIAVGALTYIAFLPPIWPLSQGLQTPFTVMPIQIFNWVSRPQAEFHNVAATGILVLMVVLLLMNSIAIFLRNKFQKKLN
>NC_019780.1|WP_041235746.1|1430116_1430995_-|phosphate-ABC-transporter-permease-subunit-PstC
MSKFIERVVILIFGLFALVSIATTAGIVLTLAAETFSFFQDIPFLRFLTDTQWTPLFVNPQYGIFVLLSGTFLTSVIAITVALPVGLLSAIYLSEYAPGQLRKWIKPALEILAGVPSVVFGYFALLFVTPLLQNFIPGLQGFNALSAGLVMGISIIPLVASLSEDALYSVPQGLRQGAYAMGCTKKEVVTGVVIPAGLSGIVASFILSVSRAVGETMIVTVAAGQNPTLTLNPLVSVQTMTSFIVQVSLGDAPTGTLAYKTLFAVGTTLFLITLTLNAFSFWFVRKFREKYD
>NC_019780.1|WP_015229113.1|1431456_1432506_-|PstS-family-phosphate-ABC-transporter-substrate-binding-protein
MFNQYSRRLISLASIGTLTLTLAACGGSGTGGGEAGGGGGSELSGSVTIDGSSTVFPITEAMAEEFQGKFSGVRVTVGVSGSGGGFKKFCNGETDISNASRPIKESEQEMCAEAGIEFIEIPVAFDAISVIKNPENDWAECLTTEELETIWRPEAQGEINNWQQVRSSFPDQRLSLYGPGTDSGTFDYFTEAIGGEGGASRGDYTASEDDNVVVQGVVSDEGSLGYLGLAYYEENQDKLEAIAVDDGNPDNGEGCVPPSAATVEDGTYQPLARPIFIYVKRSAAEEKAQVEEFINFYLSSENRNLVTEVGYVGLSDTIYEKAIARFENRKTGTIFEDGSTVGVKLNEVL

Crispr_ID: NC_019780_16

• CRISPR_ID: NC_019780_16
• CRISPR_location: 1454019-1454134
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_16

Consensus_repeat	Method
TGTTGGGTTTTGTGACCTCCACCCAACC	CRISPRCasFinder

spacers of NC_019780_16

>16.1|1454047|60|NC_019780|CRISPRCasFinder
GACATCTACTGATTGATGTTGGGTTTCGTGACCTCCACCCAACCGACATCTACTGATTGA

CRISPR arrays and Neighbor proteins around NC_019780_16

CRISPR arrays

The CRISPR arrays of NC_019780_16

>merge|NC_019780|16|1454019-1454134|CRISPRCasFinder
TGTTGGGTTTTGTGACCTCCACCCAACCGACATCTACTGATTGATGTTGGGTTTCGTGACCTCCACCCAACCGACATCTACTGATTGATGTTGGGTTTCGTGACCTCCACCCAACC

>NC_019780|16|16|1454019-1454134|CRISPRCasFinder
TGTTGGGTTTTGTGACCTCCACCCAACC	GACATCTACTGATTGATGTTGGGTTTCGTGACCTCCACCCAACCGACATCTACTGATTGA
TGTTGGGTTTCGTGACCTCCACCCAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229139.1|1458774_1460166_-|TldD/PmbA-family-protein	unknown	unknown	gnl|CDD|223389
NC_019780.1|WP_041235749.1|1445771_1446941_+|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl|CDD|235596
NC_019780.1|WP_015229141.1|1461478_1462297_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|366166
NC_019780.1|WP_156800689.1|1445239_1445605_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|377965
NC_019780.1|WP_015229132.1|1449964_1452037_-|intein-containing-thymidylate-synthase	unknown	unknown	gnl|CDD|274010
NC_019780.1|WP_015229137.1|1457123_1457399_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NC_019780.1|WP_015229134.1|1453818_1453956_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229142.1|1462309_1463029_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl|CDD|153251
NC_019780.1|WP_015229124.1|1441937_1443545_+|Hsp70-family-protein	unknown	unknown	gnl|CDD|223520
NC_019780.1|WP_041235379.1|1460172_1460388_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229138.1|1457499_1458735_-|hypothetical-protein	unknown	unknown	gnl|CDD|274604
NC_019780.1|WP_015229136.1|1454710_1456684_+|glycine-oxidase-ThiO	unknown	unknown	gnl|CDD|234687
NC_019780.1|WP_041235378.1|1443612_1443921_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800691.1|1448319_1449534_-|alanine-racemase	unknown	unknown	gnl|CDD|143481
NC_019780.1|WP_015229135.1|1454245_1454683_+|DUF4079-domain-containing-protein	unknown	unknown	gnl|CDD|372553
NC_019780.1|WP_015229140.1|1460509_1461382_-|fatty-acid-desaturase	unknown	unknown	gnl|CDD|239591
NC_019780.1|WP_015229126.1|1444066_1445152_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|379114
NC_019780.1|WP_015229131.1|1449597_1449855_-|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|340452
NC_019780.1|WP_015229129.1|1447088_1448330_+|glycosyltransferase-family-1-protein	unknown	unknown	gnl|CDD|340830
NC_019780.1|WP_015229143.1|1463414_1465013_+|methionine--tRNA-ligase	unknown	unknown	gnl|CDD|237012

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229139.1|1458774_1460166_-|TldD/PmbA-family-protein	gnl|CDD|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	5.54393e-127
NC_019780.1|WP_041235749.1|1445771_1446941_+|pyridoxal-phosphate-dependent-aminotransferase	gnl|CDD|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NC_019780.1|WP_015229141.1|1461478_1462297_-|alpha/beta-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.62434e-13
NC_019780.1|WP_156800689.1|1445239_1445605_+|SH3-domain-containing-protein	gnl|CDD|377965	pfam08239, SH3_3, Bacterial SH3 domain.	0.000398663
NC_019780.1|WP_015229140.1|1460509_1461382_-|fatty-acid-desaturase	gnl|CDD|239591	cd03514, CrtR_beta-carotene-hydroxylase, Beta-carotene hydroxylase (CrtR), the carotenoid zeaxanthin biosynthetic enzyme catalyzes the addition of hydroxyl groups to the beta-ionone rings of beta-carotene to form zeaxanthin and is found in bacteria and red algae. Carotenoids are important natural pigments; zeaxanthin and lutein are the only dietary carotenoids that accumulate in the macular region of the retina and lens. It is proposed that these carotenoids protect ocular tissues against photooxidative damage. CrtR does not show overall amino acid sequence similarity to the beta-carotene hydroxylases similar to CrtZ, an astaxanthin biosynthetic beta-carotene hydroxylase. However, CrtR does show sequence similarity to the green alga, Haematococcus pluvialis, beta-carotene ketolase (CrtW), which converts beta-carotene to canthaxanthin. Sequences of the CrtR_beta-carotene-hydroxylase domain family, as well as, the CrtW_beta-carotene-ketolase domain family appear to be structurally related to membrane fatty acid desaturases and alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of these sequences also reveals three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.	1.21311e-84
NC_019780.1|WP_015229137.1|1457123_1457399_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	4.16251e-11
NC_019780.1|WP_015229132.1|1449964_1452037_-|intein-containing-thymidylate-synthase	gnl|CDD|274010	TIGR02170, Thymidylate_synthase_ThyX, thymidylate synthase, flavin-dependent. Two forms of microbial thymidylate synthase are known: ThyA (2.1.1.45) and ThyX (2.1.1.148). This model describes ThyX, a homotetrameric flavoprotein. Both enzymes convert dUMP to dTMP. Under oxygen-limiting conditions, thyX can complement a thyA mutation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	8.71579e-29
NC_019780.1|WP_015229142.1|1462309_1463029_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl|CDD|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.74475e-26
NC_019780.1|WP_015229124.1|1441937_1443545_+|Hsp70-family-protein	gnl|CDD|223520	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones].	2.7636e-79
NC_019780.1|WP_015229138.1|1457499_1458735_-|hypothetical-protein	gnl|CDD|274604	TIGR03492, TIGR03492, conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.	1.02517e-174
NC_019780.1|WP_015229136.1|1454710_1456684_+|glycine-oxidase-ThiO	gnl|CDD|234687	PRK00208, thiG, thiazole synthase; Reviewed.	1.08292e-157
NC_019780.1|WP_156800691.1|1448319_1449534_-|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	2.12061e-175
NC_019780.1|WP_015229135.1|1454245_1454683_+|DUF4079-domain-containing-protein	gnl|CDD|372553	pfam13301, DUF4079, Protein of unknown function (DUF4079). This is an uncharacterized family of proteins.	2.06048e-35
NC_019780.1|WP_015229143.1|1463414_1465013_+|methionine--tRNA-ligase	gnl|CDD|237012	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed.	0
NC_019780.1|WP_015229126.1|1444066_1445152_-|AAA-family-ATPase	gnl|CDD|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	7.44295e-21
NC_019780.1|WP_015229131.1|1449597_1449855_-|MoaD/ThiS-family-protein	gnl|CDD|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	4.63145e-25
NC_019780.1|WP_015229129.1|1447088_1448330_+|glycosyltransferase-family-1-protein	gnl|CDD|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	9.76207e-165

Protein sequences

>NC_019780.1|WP_015229134.1|1453818_1453956_-|hypothetical-protein
MTKDKGQKCRLGGGHKTQHQSVDVGWVEVTKPNVNQLPVTSRSQT
>NC_019780.1|WP_015229132.1|1449964_1452037_-|intein-containing-thymidylate-synthase
MDKFRIEVIKATPNPQQVIWLAMHQDYAEDFVWDKRDRAPDETQAGENVIKFLLAGERGHYGPLEHPQITFNVGFFPHSMMQQIRTHRVGISFDVQCLAGDTEVTFVKASGSLKKVKISELYDLWTNGEKAVRERKIRGRNNESPGTYRRDCKKRLEKMSLRVLNEETGQFEMSHLQDVVCSGIQPVYRLTLEDGKTLDCTTNHKLLTSEGWQRMGEAVDLVLDSSRQVVDTRKDCWLLCNGNTVAGNGLYRDKIWLKEQIEQGKSPQEMAEISQCSLTTIREWSKRHGLKLNSKDTKFKQGEKPWNYSESAIYRDQFWLQEKLDQGLHVNEMADLAGCSIEAIKKWVYYYGLSLNKRLTGCRIPWNKGKTGYCLNLSEESRQIRRQNSRRFTKRGSESNFWKGGTSDERELIGAWTRQVAPQVHEKFDYICQRCGSRGGVLHAHHLVPVFADESLAYDFDNLVSLCKDCHEYIHHHHLEADLANEFQPILEPSNWNSKPKSPGRKLKAHPVKVAKVEYLGLQTTYDLEVAEPWHNFVANGIVVHNSFRYTGKRILDVAEGKRDAEEVFYLRPVGEYTNRQGKRYFYSEEQRQADLEWCIEASKRYQKRIDEGLAEEHARGIIPFDTRQHFVMSCNARSLMHLLDLRWKKDAQLEAQKFSELLFGHFQAWTPQLAEWYLETRAKKAKLSP
>NC_019780.1|WP_015229131.1|1449597_1449855_-|MoaD/ThiS-family-protein
MSNQITVTVKLFAAYQEAYGVEEIQQQFPPQTPVKAVLDQIISEHPQLEQWREITRFGVNLSFVPPETTLKDGDEVVLIPPVSGG
>NC_019780.1|WP_156800691.1|1448319_1449534_-|alanine-racemase
MVVLSGNRLTAKVEIASSSAFLNTDRAWVEINQAALYQNVKTIKQLLSPKTSLMAVVKADAYGHGAVTVAKTVLDAGGEALAVATLQEGIDLRLADIDAPILVLGAINTIEEIEAFSRWDLEATLCSPQQAQVFAETLRKTGKTLPVHLKLDTGMSRLGVLWEEAVAFVSLIQQFQELEIKSIYSHLATADENEESFMWLQKSRFDRAIERLKTSLNYTPPCLHLANSAGTLRDRSLHYDLVRVGLALYGLSPSPKFTSMPEGRSLRDIAPLEPVLQVKARITQIKDLPAGAGVSYGHKYITDRPCRIAVVGIGYADGVPRNLSNRLQVLWKGQKLQQIGAITMDQLMLDVTSCDNIQVGEIVTLIGKEGEQSLTADDWAQQLGTISWEILCGFKHRLPRLAKG
>NC_019780.1|WP_015229129.1|1447088_1448330_+|glycosyltransferase-family-1-protein
MNTENNRKQIALISVHGDPAVDIGGEEAGGQNVYVRQVGEALAQLGWEVDMFTRLADADQSPLVQHQAHCRTIRLSAGPKTFIPRQEIFEHCDRFLEEFIKFSRQEGRNYALIHTNYWLSAWVGLELRRRLSLPMIHTYHSLGAVKYQSVQEPPETATRRLEIEKAALETAECIVATSPQEKDYLRSLVSSRGNIEIIPCGTDINHFGSITYEQAREKLGFSPEEKVIYYVGRFDPRKGIETLVRAIHQSQIRSQSPIRLIIAGAYRPGQSDGKEKERISQIVKELGLEEMTEFPGRISDENLPIYFAAADVCVVPSHYEPFGLVPIEAMASGTPVVGSAVGGLNFTVVSEETGLLVPPKDEEAFANAIDRVLSDPQWRNQLGKNARKRMEEEFSWEGVASQLNDLYSRFVTL
>NC_019780.1|WP_041235749.1|1445771_1446941_+|pyridoxal-phosphate-dependent-aminotransferase
MPLANRVQEVTPSLSLEISAKAKAMKADGLDVCSLSAGEPDFNTPDHVIAAAKCALDEGKTRYGSAAGEGKLRSAIAQKLQTENNLPYSPNQVIVTNGGKYSLFNLMQALINPEDEVIIPSPYWLSYPEMVKLAAGTPVIVPTTAQQQYKITAQQLQDSITPRSKLFILNSPSNPTGAVYSREELTALADVIVKNDLWVVSDEIYEKILYDQAEHISIGSLNPEIFARTLVSSGFAKTYAMTGWRVGYLAGNQEIINAMISIQSHSTSNVCTFAQYGAIEALENPLSQDAIKEMLTAFTERRKMVLEILSTIPEVSCSEPYGAFYLFLDISKTGKTSFNFANEFLEEMQVATVPGIAFGNDSCIRLSYATDMTTLEKALERLTKFVQTA
>NC_019780.1|WP_156800689.1|1445239_1445605_+|SH3-domain-containing-protein
MSRQMKNIISVLLLASLGIFQGETIVSAQSDFREQQSLCTASLVANNLNARITLRSGPGTNFKSLGYGLVGDYIYILATNPPEADYARDRQGYFWYRVGFPRSGAQGWIREDFLKKFCQYD
>NC_019780.1|WP_015229126.1|1444066_1445152_-|AAA-family-ATPase
MYFTELDIYHFRDIESLEIREIKQVNLITGRNNCGKTSILEAIFLLSGMSNPQLSLRIHNFRNFNLTEADDFSYLFKDLNFSHTPQIRGKLTSQNRQLQIEPIHQTTQTNQQQFSEKSNLNENDLFSYTSPSNEYNSEIEGIQFNYSIDNQNSYQSLIRLKQGQGEISIPHNYRENLTATFLSPNTIMSSLGQQLEKAIIRKKLKSIITALQEIEPRLLDIRMGNRGIVYADLGLDNLVPINVMGDGFIRILAILASISENKNGILIIDEIENGFHYKTLAVLWKAMLKMAFQSNVQLFLVTHSYECIESLVNVYQTMKPELREDFVSLFRIERNAKGEHKAFQYEGDTLMVGIQEEIEVR
>NC_019780.1|WP_041235378.1|1443612_1443921_-|hypothetical-protein
MRVGIFIMPNNSDEGMLEDLCLKSIKKNSIDHCIEEYIQCCLDNLPDEEKNIKISKAKVLAFLATKNPLVNSLGVAAKNGYWNLKDDCFDEIKEFINKLVAI
>NC_019780.1|WP_015229124.1|1441937_1443545_+|Hsp70-family-protein
MTESANYAIDFGTSNTVITRWNTTTATADVVSLSSVSQQLPNNPPLVPSLLYVEDANQEQVVIGQAVRDRALDVKSDPRFFRGFKRGIAASVQGFLPELDGKTVTFEQAGEWFLESLTQQLQQQEKTEIESLVLTVPVDSFEAYRHWLTTVCGHLKAKQVRLIDEPTAAALGYGTTKQDILLVIDFGGGTVDFSLVQLNLGETEKQPLGFILKWGDKLLGEKSSQKVKTARVYGKAGANLGGSDLDNWLVDYFVRTQGVEKSGLTTRLAERLKVQLSSQETAEEVYFDETTLDTLELKLERDRFEEILREHQFFAQLDDLMTNVLQQGRRNGIETEDIQSVLLVGGTVQIPAVKQWLEQYFEGTKIQCDRPFSAIASGALQLQSGFKLQDFLYHSYGIRYWNYRENKHSWHPIIKAGQPYPMTTPVELTLGASVENQPSIELIIGELGSENSGKTEVYFDGNRLVTRTLDDGESKVIPLNEDAKTIAQLNPVGSPGRDRVKLQFWVDQHRSLRITVEDLLTQKTLLKEQVVTELS
>NC_019780.1|WP_015229135.1|1454245_1454683_+|DUF4079-domain-containing-protein
MDLPSFLWLWKIAAWSMGLSVTAYGILATTGIGMSYLRAKKSPRPQWLRPLHYTIGIILVSLVILLLSIGLVGTIGEYGSLGHSPHLIAGLTVVGLVLISAVSATRISAKRPWWRQVHVITNAILFLALAFVSWTGWDVVQKYLN
>NC_019780.1|WP_015229136.1|1454710_1456684_+|glycine-oxidase-ThiO
MSSTIIIGGGLIGRAIALSLQQKGEQVTVISRNPVEAAGFAAGGMIAPQAEAIAPSPLLDLALRSRNLYPDWIQQLETQTGLDTGYNPCGILAPVYEKTEPVSPHVQPATWLEKSDLEFYQGGLGFDVVGAWWYPEDGQVDNRALMKTLFVAAKDAGVEFREGVTVKSIQRQNDRVTKIRTSEGELKADHYVLATGSWVKELFPLAVRPLKGQMMSLEMPQSPYPIQQVLFGPNTYLVPRQDGRLIVGATVEDVGWKANNTPTGIKTLIDRAMRLYPDVANWSIQDTWWGYRPTTPDELPILGRSDCDNLFLATGHHRHGILLAPITAELIATFITEGKADPLLDHFHPQRFHSKNTRQWFSTTMNGKNGHSQISQISEPTSLTPSQPEDEPLVIAGRTFQSRLLTGTGKYPSPEIMRQTVAASGSEIVTVAVRRVQNNAPGHEGLGSALDWGKIWMLPNTAGCQTAEDAIRVAKLGREMAKLLGQEENNFVKLEVIPQPKHLLPDPIGTLEAAEALVKEGFAVLPYINADPVLAKRLEEVGCATVMPLGSPIGSGQGIKTEANLRIIIEEATVPVVIDAGIGSPSEAAYGMELGADALLINSAIALAKNPVVMGKAMGMATIAGRLAYLAGRIPIKQYASASSPTTGLVGSVTSDQ
>NC_019780.1|WP_015229137.1|1457123_1457399_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGIITWAILGLIAGAIAKAIYPGEQNTGILGTMALGILGSLAGGWIGEQLQEFLTIPSPEVGSFSLSGIITAVLGAIAIIFIWGLLTKPSR
>NC_019780.1|WP_015229138.1|1457499_1458735_-|hypothetical-protein
MKLLCLSNGHGEDVIAVRVIEALRQKTQQLEVVALPIVGDGTAYHRSSIPIIAPAKKMPSGGFIYMDARELWRDVRGGLIALTLAQLKAVRRWGKERGMILAVGDIVPLLFAWLSQTNYTFVGTAKSEYYLRNEVGWLPKTSVWERKLGSVYLPWERCLLKHRRCQGVFPRDELTTNILQKFHIQAYNFGNPMMDGLIPEALIVEELETQRSLRVLLLPGSRSPEAERNWELILEAVENIIIRETKRKLCFFAPIAPSLDLNPFCEPLEARGWQLNTTTSPSTPVRDEKGLEFYQGMTRLLLTQSAYHSCLLASDLAIAMAGTATEQFVGLGKPVITFPGKGPQYTYRFAEAQTRLLGASVILVKKPSQVVEIIRELFSDPDRLQLIADNGKRRMGVNNASSRIAEHLLTF
>NC_019780.1|WP_015229139.1|1458774_1460166_-|TldD/PmbA-family-protein
MTDYRSLLSDLIQKYRDRADFILIRVEESESTSILLRGENIETLSEEIAIGGQVRVCYRGGWGFASFNRLSTLTERLEDAIAAARRVGIGKTCLAPVLPLEGVYRLPLPAGDPRSIPLANKKALCDHYNNILREYDPRITTTAVSYGDLTQRVTIATSEGTLIEQAWTDLEARFSAIARDGEIIQTGRETTGSRQGWNDLLHLENQVLSAAARAINALSFPTITGDTYPVVIDPILSGLFVHEAFGHLSEADMIYENPDLMEVMTMGRKFGPDHLQIFDGAAPPGHRGSYQVDDEGTPATTTQLIENGFLVGRLHSRETAGKLGERPTANARCLDYQYPPLVRMTNTWIERGETPVQDLFQNIPVGVYAKNWLGGMTNGEMFTFSAGEAWMIRNGELAEPVRDVTLSGNVFKTLANIEAIGDDFYWDESGGCGKGGQSGLPVGCGGPSLRIKDVVIGGESVEG
>NC_019780.1|WP_041235379.1|1460172_1460388_+|hypothetical-protein
MVIGYWLFVICYLLFVIGYWLFVIGYWLFVIGNHRKELDKRSEDVTGVTGVTRCFFLPISRLPYAWVSVMV
>NC_019780.1|WP_015229140.1|1460509_1461382_-|fatty-acid-desaturase
MVQTQQSLRVPKDYIDPDGGWNVNVWMFLVAWGMFILSHCGYWLWHWEGWLCFVINVLCLHFAGTVIHDASHRAGHRNRVINTILGHGTALMLGFVFPVFTRVHLQHHAHVNDPKNDPDHFVSTGGPLFFIPARFFYHEVFFFKRKLWKNYELLEWFFSRLIVGLIVYYSFQYGFFDYLVNYWFSPALVVGWTLGLFFDYLPHRPFQERDRWKNARVYPSKILNWLICGQNYHLVHHLWPSIPWYKYQPAYYQMKPLLDKKDCYQSLGLLAGKKDFFGFIYDIFLGIRFH
>NC_019780.1|WP_015229141.1|1461478_1462297_-|alpha/beta-hydrolase
MDKQQTQPHFLKPKSVHPNYPLFVFLPGMDGTGELIHTQTDTLDQCFDIRSLAIPQNDFRGWDELATAVIELVKEEQENKSEKTTYLCGESFGGCLGLKVLEKAPELFNRVILVNPASSFRERPYLAWGAVGTGWMPEPIYRSSTVLILPFLAAMGRIDTKDRRALLNAMKSVPPQTVRWRLSLLEQFSVDPDRLQAISVPVLLLAAESDRILPSVKEAEYLASYFPNAQIITLPDSGHTCLLESENRLCEILQAANFLENRAREHLFSATS
>NC_019780.1|WP_015229142.1|1462309_1463029_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MVSNRPLNLSQGFLQALGTKVFIYFENRIPQDAAVVVVSNHRSFMDPMMLMVGLKHPLRTACHHYMGEVPLLREVVTFLGCFPLANESKRGTSFVRQGKKFLNANDWLAVFPEGAQPMVNLTTPREIKPFQPGFAHLLLRSQIPNLAVLPVAILSEQEQVTSTIPLKFLHWFDPSENLFDQWTLHPMVIYERANLLIGRPYWVTPKIQKQYRGKQTKKGILELTDYCQEEIQTLLKTGY
>NC_019780.1|WP_015229143.1|1463414_1465013_+|methionine--tRNA-ligase
MENQKKTFAITTPLYYVNDVPHIGSAYTTMAADAIARFKRLEGNAVLLITGTDEHGQKIQRTAEEKGISPQSQCDKVAASFDSLWQKLNIQYDRFSRTTAARHEAIVKEFFQRVWDNGDIYLAQKQGWYCVSCEEFKEKRDLVNDGYCPIHTNKKAEWRDEENYFFCLSKYQTQLEILYETQEDFIQPRSRRNEVLNFVQQGLQDFSISRVNLDWGIPVPTDPKHTIYVWFDALLGYVTALLDPEDEPTLEKALARWWPIDLHLIGKDILRFHAVYWPAMLLSAGISTPKKVFGHGFLTKDGQKMGKSMGNTLDPVALLDRYGADAVRYYFLREIELGQDGDFNENRFVDVLNSDLANDLGNLLNRTLKMANKYCNNQSPNLKGEQIPAENPLKEIGMELSDRVTVAYNKLNFSEACKEIIHLVTNSNKYIDQQAPWSLYKQGKQAEVEEVLYSILESIRLSAYLLSPITPDLSSQIYQQLGFKIDFNQPSSFEPNINFDVHKSWGSLPPLQPLGEAKPVFLRLELPEESPL

Crispr_ID: NC_019780_17

• CRISPR_ID: NC_019780_17
• CRISPR_location: 1478766-1478860
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_17

Consensus_repeat	Method
CGTTGGGTTGTCACCCAACCTAC	CRISPRCasFinder

spacers of NC_019780_17

>17.1|1478789|49|NC_019780|CRISPRCasFinder
AATTGTTGATTTGCGTTGGGTGATTACCGAACCGACAATTGTTGGGTGC

CRISPR arrays and Neighbor proteins around NC_019780_17

CRISPR arrays

The CRISPR arrays of NC_019780_17

>merge|NC_019780|17|1478766-1478860|CRISPRCasFinder
CGTTGGGTTGTCACCCAACCTACAATTGTTGATTTGCGTTGGGTGATTACCGAACCGACAATTGTTGGGTGCCGTTGGGTTATCACCCAACCTAC

>NC_019780|17|17|1478766-1478860|CRISPRCasFinder
CGTTGGGTTGTCACCCAACCTAC	AATTGTTGATTTGCGTTGGGTGATTACCGAACCGACAATTGTTGGGTGC
CGTTGGGTTATCACCCAACCTAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229146.1|1470483_1471431_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl|CDD|235049
NC_019780.1|WP_015229155.1|1483101_1483779_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_019780.1|WP_015229153.1|1480423_1481698_+|adenosylhomocysteinase	unknown	unknown	gnl|CDD|235488
NC_019780.1|WP_015229156.1|1483804_1484725_-|NAD(+)-kinase	unknown	unknown	gnl|CDD|179456
NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein	unknown	unknown	gnl|CDD|223003
NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein	unknown	unknown	gnl|CDD|238121
NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|177093
NC_019780.1|WP_083874389.1|1481802_1482210_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl|CDD|378065
NC_019780.1|WP_015229154.1|1482410_1483007_-|hypothetical-protein	unknown	unknown	gnl|CDD|227645
NC_019780.1|WP_015229151.1|1476768_1477698_+|phytoene-synthase	unknown	unknown	gnl|CDD|215339
NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_019780.1|WP_015229152.1|1477749_1478559_+|peptidoglycan-binding-protein	unknown	unknown	gnl|CDD|366659
NC_019780.1|WP_156800695.1|1469169_1469328_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800697.1|1469847_1470006_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229148.1|1472250_1474254_-|K+-transport-system,-NAD-binding-protein	unknown	unknown	gnl|CDD|367001
NC_019780.1|WP_083874387.1|1474594_1474759_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|226194
NC_019780.1|WP_015229150.1|1475266_1476694_+|15-cis-phytoene-desaturase	unknown	unknown	gnl|CDD|131778
NC_019780.1|WP_041235752.1|1474755_1475013_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl|CDD|274227
NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_019780.1|WP_015229147.1|1471393_1472239_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229146.1|1470483_1471431_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl|CDD|235049	PRK02534, PRK02534, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	7.32627e-168
NC_019780.1|WP_015229155.1|1483101_1483779_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.90106e-64
NC_019780.1|WP_015229153.1|1480423_1481698_+|adenosylhomocysteinase	gnl|CDD|235488	PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional.	0
NC_019780.1|WP_015229156.1|1483804_1484725_-|NAD(+)-kinase	gnl|CDD|179456	PRK02649, ppnK, NAD(+) kinase.	0
NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein	gnl|CDD|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	2.73774e-06
NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein	gnl|CDD|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.0585e-83
NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase	gnl|CDD|177093	CHL00194, ycf39, Ycf39; Provisional.	2.34256e-175
NC_019780.1|WP_015229154.1|1482410_1483007_-|hypothetical-protein	gnl|CDD|227645	COG5340, COG5340, Predicted transcriptional regulator [Transcription].	2.56667e-11
NC_019780.1|WP_015229150.1|1475266_1476694_+|15-cis-phytoene-desaturase	gnl|CDD|131778	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NC_019780.1|WP_015229151.1|1476768_1477698_+|phytoene-synthase	gnl|CDD|215339	PLN02632, PLN02632, phytoene synthase.	1.29052e-156
NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.55143e-111
NC_019780.1|WP_015229152.1|1477749_1478559_+|peptidoglycan-binding-protein	gnl|CDD|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	3.5863e-18
NC_019780.1|WP_015229148.1|1472250_1474254_-|K+-transport-system,-NAD-binding-protein	gnl|CDD|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	9.82916e-13
NC_019780.1|WP_083874387.1|1474594_1474759_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	2.72912e-05
NC_019780.1|WP_015229147.1|1471393_1472239_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	8.0595e-106
NC_019780.1|WP_041235752.1|1474755_1475013_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl|CDD|274227	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family. This bacterial protein family has a very similar seed alignment to that of pfam03693 but is a more stringent model with higher cutoff scores. Proteins that score above the trusted cutoff to this model almost invariably are found adjacent to a ParE family protein (pfam05016), where ParE is the killing partner of an addiction module for plasmid stabilization. Members of this family, therefore, are putative addiction module antidote proteins. Some are encoded on plasmids or in prophage regions, but others appear chromosomal. A genome may contain several identical copies, such as the four in Magnetococcus sp. MC-1. This family is named for one member, CC2985 of Caulobacter crescentus CB15. [Cellular processes, Other, Mobile and extrachromosomal element functions, Plasmid functions].	9.70342e-09
NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	4.62013e-111
NC_019780.1|WP_083874389.1|1481802_1482210_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl|CDD|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.25346e-15

Protein sequences

>NC_019780.1|WP_015229152.1|1477749_1478559_+|peptidoglycan-binding-protein
MINWKTLPRERGIYQITTGSVSYVGLSDNIQLRVKQHLDSSSCRSRIIFDTDQAKIIVLELLPDTDDKTLALREWYWFSKLKRKGHIMVNDPKTLGKTKTGQFFPPKNVSQKTASSPSSGLGCGVKLAGVTTVIVGFFLLGFFAVGKMIQQTEPSPQPDTTENPSPKPPVPSSRLSRNQDNKSTQQNSQVDMQLLSACITPLQSGTSKPVVKLLQRQLKELGYYEGEIDGQYGPGTQDAVSEFQRDYDLGVDGIVGCDTQAKINEAIRN
>NC_019780.1|WP_015229151.1|1476768_1477698_+|phytoene-synthase
MLQLPNPEQTCSYPSVESAYEFCRQVTAEYSKTFYLGTLLMPKEKRKAIWAIYVWCRRTDQLVDGPEAEFTTLDTLDQWEKTLESIFAGNPVESPDLALVDTLKRFPLEIQPFRDLIAGQRMDLKRDRYQTFDELYLYCYRVAGTVGLMSNAVLGLEPEWGVSPWQKNQKNHIPTEEAVALGIANQLTNILRDVGEDADRGRIYLPLEDLERFNYREEDLFNGVINENWRQLMQFEIQRARGFYAQAERGIRDLSRESRWPVWTALMLYQGILDVIERNQYDVFNRRAYVPKVEKFLYLPVAWLRSQAL
>NC_019780.1|WP_015229150.1|1475266_1476694_+|15-cis-phytoene-desaturase
MRVIIAGAGLAGLSCAKYLVDAGHTPIVLERRDVLGGKVAAWQDEDGDWYETGLHIFFGAYPNMLQLFKELDIEDRLQWKEHTMIFNRPEKPGTYSRFDFPNLPAPINGVIAILRNNDMLSWPEKIRFGIGLIPAMLRGQGYVEAMDRYTWSEWMERQNLPKRVEKEVFIAMSNALNFINPNEISATILLTALNRFLQEKTGSKMAFLDGSPTERLCQPLVDYLTERGGEVRLNAPLKEILLNEDGTVRGYLIRGCNGAEEEMLTADAYVSAMPVDPLKLMLPPSWKEMDFFKQLEGLEGVPVINVHLWFDQKLTDIDHLLFSRSDLLSVYADMSNTCRGYEDADQSMLELVLAPAKDWIGRSDEAIIEATMAELKQLFPKHFTGDRPANLLKSHVVKTPRSVYKATAGRQAHRPSQKTPINNFYLTGDYTMQQYLASMEGAVLSGKLTAQEISQSQSQPSSGKKTEKKTVSVAK
>NC_019780.1|WP_041235752.1|1474755_1475013_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MSIELTPELEEIIQHQVNKGNYKSANEVILAGVKLLEKVERAYQGRYEELRQEILQGIEASEQGKVLDSKVVFQNLQNKLNNKKV
>NC_019780.1|WP_083874387.1|1474594_1474759_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSRRCRFTRIASSDLENILDYIAEQNGIDVAEKFLKRINQKCQILNSENASIAL
>NC_019780.1|WP_015229148.1|1472250_1474254_-|K+-transport-system,-NAD-binding-protein
MTDHFLVCGLGSLGQHCVYALKQFAVSITAIEQIEPRQWEIPHLPSCLTDLILGDCRDAETLQAAKIDQCRAILIVTSNERINAETAVAARSLSPHVRLVIRSGQDNLNQLLGEHLGNFIAFEPTELSADAFALAALGTETQGLFYLKTGDETEQQLFRVIKRRIEATDQWCDQRTLQDLNTQKRKVLAYQSFSSSQLTNLFYNWHPEQVLKAGDIVVYVQREDFLTSDSFLVDHSPQERKPLPKKLTVSFIQDECQKLYRNVLKLPVRRVALICGGIVISLIVIGTIILWLSTPNTTLLSSFYATVILLLGGYADLFGDLEASDQIQWWLQLFSLTLTIAGTALVGVLYALVTEALLSSKFELSQRRPPLPEEDHIIIIGIRRVGKRVAKLLLDLKQSLLGIPLNPEFDHNFLPEMPILFGNLKESLQQANLQGAKSVIVGTEDEMLNLEISLTIHRINPDCQLVIRTFEQRLSENLSQLLPKAVVLCAYSVVAEAFAGAAFGENIIKLFRLNQQTVLVTEYKVEEMDTLNGLLLADVAYGYNVVPILHQKEGHSVKFMPADDICLSVRDRLVVLATKEGLKKVELGELDISGKIWQVKLESARTDEALFEAGNTLVRVTGCSLNEAREIMNHLPTTAPFLMYHHQAKRLIRELKKIQVQGIIINQ
>NC_019780.1|WP_015229147.1|1471393_1472239_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTRNVKPRKQFAQHWLKSEKALDQIIETAALNSEDAVLEIGAGTGILTRRLLLSASTVVAVEIDRDLIKKLKQKFQTEEHLLLLEGDFLKLDLASLVSPTPRKVVANIPYNITAPILEKLLGSIAHPEQKYEKIVLLVQKEIADRICANSGSKTFGGLSVRSQYLAACEFISIVPAKAFSPAPKVDSAIISLTPRPFPLPANSPQFLEQLIKLGFANRRKMLRNNLKSMISPQQLQPILEQLEISPLVRAEDISVSNWVRLCNQLDLQINATLLTDCTREN
>NC_019780.1|WP_015229146.1|1470483_1471431_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MQHYSLTAPAKINLHLEIIGDRADGYHELVMILQGIGLEDRIDLYAGSTQAIHLHCEHPDVPLGPDNIAYKAAQLMCREYSQAYAQYGGLEITIDKKIPVAAGLAGGSTDAAAVLVGINLLWKLGLTQPELQTLASQLGSDIPFCLEGGTALALGRGEELSPLQGLDQATVILAKHRNLFVSTAWAYQSYRQRFGESYYQKPETIEVGKKQAHSADLVSAISQQDYLKIGQLLYNDLEKVVFPEYPKVEALKSAFQEEKEVLGAMMSGSGPTVFALCSATAKAQDIIENVRSKINDSTVEFWTTELTNRGIQVKS
>NC_019780.1|WP_156800697.1|1469847_1470006_-|hypothetical-protein
MERKSVVSEDNSVFKQEMTTILHHLNFWRGTESRQFLSNPSNSFSASIASYN
>NC_019780.1|WP_156800695.1|1469169_1469328_-|hypothetical-protein
MERKSVVSGDNSVFKQEMTTILHHLNFWRGTESRQFLSNPSNSFSASIASYN
>NC_019780.1|WP_015229153.1|1480423_1481698_+|adenosylhomocysteinase
MTATQVKHEVKDLSYAPLGKQRIEWAGREMPVLRQIREQFAKDKPLEGIKMVACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDTAASLVADYDIPVFAIKGEDNETYNRHINIALDHRPNIIIDDGSDVTAALIQHRKDQIKEIIGTTEETTTGINRLRAMFDDGVLTFPAMNVNDADTKHFFDNRYGTGQSTIDGIVRATNVLIAGKTFVVGGYGWCSKGVALRAAGMGANVVITEVDHVRALEAAMDGFRVMPMSEAAKIGDIIVTLTGNKHVVASHHFDVMKDGAIVCNAGHFDIELDLKSLREKASEVKEVRPFTEQYILPNGKSVIVLGEGRLINLASAEGHPSAVMDMSFANQAKGSEYLALNKGKLEPGIHSIPREVDKEIARLKLNAMGIKIDDLSQEQLKYMSSWTEGTD
>NC_019780.1|WP_083874389.1|1481802_1482210_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MRIYPRETVVAEKFQAMVYLGISNSRMKDFYDLLFLAKNFEFKGQILKEAIEATFKRRKTSISEEIPLALTEEFTQNLAKEKAWKGFLNKNQLEPENPTLRDIIEELKLFLIPPYIAISKNQVFEKTWRPDQKWL
>NC_019780.1|WP_015229154.1|1482410_1483007_-|hypothetical-protein
MSKTKQVLEIAQKVGVVRAKELEAQGFHRQYLKRLEEQGLLIRSGRGIYTYVGAEITEAHSLVEVAKRVPHGVICLLSALNFYELTTQNPFEVWLAIHSKKRSPKDNLLSLRLVYLSGSAWEEGIETYELEGEKVRIYSLPKTIVDCFKYRHKIGLDVALEALKESRQQKRCTIDEIWHYAKICRVQNVMRPYLEFLG
>NC_019780.1|WP_015229155.1|1483101_1483779_-|response-regulator-transcription-factor
MSQPSVLLIESDQHLAQQVSLDLTQSGYHVTVVSHGEQAPSKFEELQPSLVVIDQAQFGDKGLTLSRQLRGNNHPVLILLLMSRDTVGDRAACLEAGADDYTLLPYQTDSFLQLVHLYLQPATSTPEQLQFSDLALDLSHRCAYRNGRKIELTVKEFELLKYLMSHPRQVLTREEILDNVWEDNHGGESNVIEVYVRYLRIKIEQGGQKRLIQTVRGVGYVLRES
>NC_019780.1|WP_015229156.1|1483804_1484725_-|NAD(+)-kinase
MPKLGIIYNDSKSVACDLTTQVQEQFQKKGWDVALATGVGGLLGYSSPDSPVCHTPMDKLIPPGFDETIEFCLVLGGDGTVLSAFRQLAPYGIPLLTVNTGHMGFLTETYVNQLDAALEEVLAGNYTLEDRSMLTVQVRRGERLQWEALCLNEMVLHREPMTSMCHFEVMVGHHAPVDIAADGIIVSTPTGSTAYSLSSGGPVVTPDVPVLQLVPICPHSLASRALVFSDREPIVIHSASEQHQLVMVVDGNGGCYVQPKDVVHIARSRYLARFIRLQRPEFFRVLREKLGWGLPHIAKPTSVELP
>NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase
MDILIAGATGTLGRQVVRRALDEGHQVRCLVRNPRKATFLKEWGANLVKGDLCKPETLPRTLEGIDAVIDAATARPTDSLTVKEVDWEGKVNLIQATKAADVNRYVFFSILNAENYPDVPMMNIKYCTEQFLAEADLDYTILKPCGFMQGLIPQYAVPILDNQAVWVTGESTPIAYMDTLDLAKFAVRALEVPETAKRSFPLAGSRAWTAEEIINLCENLSGKNAKISRLPMGLLQFLSRAMRFFEWTRNASDRLIFANVLVSGKPFDAEMSEVYDLFGLNPNEMTTVETYLQEYFSRIMKKLKEINYEKEKSKKKKKTPFKSKSKS
>NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein
MGGDGGDGGDGEDGGDGGDGEDGGDGGDGGDGEDGGDGEDGGDGGDGEEKSLPLLPCLPCLPFLPCTFLGGTIYSR
>NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein
MIKTASEGKSIQEIAENGLLVAVIVGTIIAVSTQQLAWGLIPSTIALIFNRFNRQQEENFYSYQFSSLKNLIQNHQIEQDNQQINVWELQQKLGEVEQLITELRENQTQETAARESQILELNQLQSIERKQEAIEREVERLSLLENTINNHFDFINQQQENLSQSISDIQTEVVRVNQNSQEAIQELKQELDSVRSSLNSNESSAIKLERLNQLVRQNQQRQTEIQTQLSQIETNYQTLVKQINQQPESDSNVTQETIETLESQIREANSRQTEENQYYQQAIQELKQELDSIRSNQETIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENHYYQQAIQELKQELDNARSNQETIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLNQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPEADSNVTQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDSVRSSLNSNESSAIELERLNQLVRQNQQRQTEIQTQLSQIETNYQTLLEQINQQPEEDSNVNLYPDEIITESELEAISTSTSSVPTVESNLVRINCELKKQITPNAGKINAVAFSPNGKQFISGHQNKTIKLWSLETGGEIYSFQDHSQEVLTVAYHPDGEMIASGSRDKTIKLWSVSTGNLLTTLEGHVNEVLGVTFSVDGKILGSCSKDRTVKLWSVEEEKVIDTFNNYEDEVKSIALSADGKWLATGEGNIGQTVRLLQLETRETFTLETDQIAWFPGIHSLAFSPDSNLLVGGRNDHQIILWDVKQQQEIRRLQGHENKIYTVVFHPQRNIIATGSEDKTIKLWNVNAGEEMLTLTGHRKAVLGIAFSPDGHYLISGSQDETLLIWENHYLE
>NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein
MGISLQKGERVSLEKVSPGLEAVFVGLGWDVNKTDTGNDFDLDASVFLLGENEKLVSDSHLVFYNNTKSPDPDHSVEHMGDNLTGAGEGDDEVVIINLKKVPDEVQKITFVVTIYDAEKRGQNFGQVSNAFVRLVDVKTKEEVLRYDLTEDYSIETAMIMGELYKKDGQWRMSAIGDGYEGGLPAILNRFS
>NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein
MSISLTKGERISLEKASPGLEAVFVGLGWDVNKTDTGKDFDLDTSVFLLGTDEKLISDRHLIYFNNLKSPDPENSVEHMGDNLTGAGEGDDEVVIVNLKKVPEEVQKIAFVVTIYDAEKRGQNFGQVNNSFVRLVDVKTKEEVLRYDLTEDYSIETAMIMGELYKKDGQWRMSAVGEGYEGGLPAMLNRYQ

Crispr_ID: NC_019780_18

• CRISPR_ID: NC_019780_18
• CRISPR_location: 1496311-1496454
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_18

Consensus_repeat	Method
AGTTTACGAAACCCAACACTAATCAGCAAGAGGCAAGAGGCAAG	CRISPRCasFinder

spacers of NC_019780_18

>18.1|1496355|56|NC_019780|CRISPRCasFinder
AGGCAAGAGGCAAGTTGCCTTAGGGTTGATTGATTGGTAGCAAGTAGGTTGGGTGA

CRISPR arrays and Neighbor proteins around NC_019780_18

CRISPR arrays

The CRISPR arrays of NC_019780_18

>merge|NC_019780|18|1496311-1496454|CRISPRCasFinder
AGTTTACGAAACCCAACACTAATCAGCAAGAGGCAAGAGGCAAGAGGCAAGAGGCAAGTTGCCTTAGGGTTGATTGATTGGTAGCAAGTAGGTTGGGTGAAGTTTACGAAACCCAACACTAATCAGCAAGAGGCAAGAGGCAAG

>NC_019780|18|18|1496311-1496454|CRISPRCasFinder
AGTTTACGAAACCCAACACTAATCAGCAAGAGGCAAGAGGCAAG	AGGCAAGAGGCAAGTTGCCTTAGGGTTGATTGATTGGTAGCAAGTAGGTTGGGTGA
AGTTTACGAAACCCAACACTAATCAGCAAGAGGCAAGAGGCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein	unknown	unknown	gnl|CDD|238121
NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_019780.1|WP_015229172.1|1500001_1500403_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350221
NC_019780.1|WP_015229166.1|1494941_1495280_+|DUF565-domain-containing-protein	unknown	unknown	gnl|CDD|367958
NC_019780.1|WP_015229168.1|1496665_1497244_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_019780.1|WP_041235756.1|1492432_1493476_+|oxidoreductase	unknown	unknown	gnl|CDD|223745
NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|177093
NC_019780.1|WP_041235758.1|1504124_1504376_-|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269
NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein	unknown	unknown	gnl|CDD|223003
NC_019780.1|WP_015229170.1|1498262_1499129_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|215135
NC_019780.1|WP_015229167.1|1495283_1496294_+|kinase	unknown	unknown	gnl|CDD|226691
NC_019780.1|WP_015229169.1|1497246_1498197_-|homogentisate-phytyltransferase	unknown	unknown	gnl|CDD|183813
NC_019780.1|WP_015229171.1|1499759_1500005_+|Arc-family-DNA-binding-protein	unknown	unknown	gnl|CDD|367702
NC_019780.1|WP_015229175.1|1501533_1501785_-|hypothetical-protein	unknown	unknown	gnl|CDD|172484
NC_019780.1|WP_015229165.1|1493656_1494874_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NC_019780.1|WP_015229177.1|1503766_1504141_-|hypothetical-protein	unknown	unknown	gnl|CDD|375906
NC_019780.1|WP_015229173.1|1500418_1501096_-|flagellar-motor-protein	unknown	unknown	gnl|CDD|143586
NC_019780.1|WP_015229174.1|1501117_1501537_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350298
NC_019780.1|WP_156800876.1|1491403_1492078_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein	gnl|CDD|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.0585e-83
NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	4.62013e-111
NC_019780.1|WP_015229172.1|1500001_1500403_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350221	cd09873, PIN_Pae0151-like, VapC-like PIN domain of the Pyrobaculum aerophilum Pae0151 and Pae2754 proteins and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Pyrobaculum aerophilum proteins, Pae0151 and Pae2754, and homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.10675e-20
NC_019780.1|WP_015229166.1|1494941_1495280_+|DUF565-domain-containing-protein	gnl|CDD|367958	pfam04483, DUF565, Protein of unknown function (DUF565). Predicted transmembrane protein found in plants, chloroplasts and cyanobacteria. This family is also known as YCF20.	8.80688e-17
NC_019780.1|WP_015229168.1|1496665_1497244_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.38255e-14
NC_019780.1|WP_041235756.1|1492432_1493476_+|oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.79228e-61
NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase	gnl|CDD|177093	CHL00194, ycf39, Ycf39; Provisional.	2.34256e-175
NC_019780.1|WP_041235758.1|1504124_1504376_-|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	1.13752e-14
NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.55143e-111
NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein	gnl|CDD|223003	PHA03169, PHA03169, hypothetical protein; Provisional.	2.73774e-06
NC_019780.1|WP_015229170.1|1498262_1499129_-|methyltransferase-domain-containing-protein	gnl|CDD|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	5.31782e-126
NC_019780.1|WP_015229167.1|1495283_1496294_+|kinase	gnl|CDD|226691	COG4240, COG4240, Predicted kinase [General function prediction only].	1.92655e-83
NC_019780.1|WP_015229169.1|1497246_1498197_-|homogentisate-phytyltransferase	gnl|CDD|183813	PRK12887, ubiA, tocopherol phytyltransferase; Reviewed.	1.63709e-160
NC_019780.1|WP_015229171.1|1499759_1500005_+|Arc-family-DNA-binding-protein	gnl|CDD|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	0.00316482
NC_019780.1|WP_015229175.1|1501533_1501785_-|hypothetical-protein	gnl|CDD|172484	PRK13982, PRK13982, bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional.	0.00108828
NC_019780.1|WP_015229165.1|1493656_1494874_-|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	5.07802e-73
NC_019780.1|WP_015229177.1|1503766_1504141_-|hypothetical-protein	gnl|CDD|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	1.10176e-23
NC_019780.1|WP_015229173.1|1500418_1501096_-|flagellar-motor-protein	gnl|CDD|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	9.74212e-06
NC_019780.1|WP_015229174.1|1501117_1501537_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350298	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins. This subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Neisseria gonorrhoeae FitB toxin of the FitAB toxin/antitoxin (TA) system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. In N. gonorrhoeae, FitA and FitB form a heterodimer: FitA is the DNA binding subunit and FitB contains a ribonuclease activity that is blocked by the presence of FitA. A tetramer of FitAB heterodimers binds DNA from the fitAB upstream promoter region with high affinity. This results in both sequestration of FitAB and repression of fitAB transcription. It is thought that FitAB release from the DNA and subsequent dissociation both slows N. gonorrhoeae replication and transcytosis by an as yet undefined mechanism. The toxin M. tuberculosis VapC is a structural homolog of N. gonorrhoeae FitB, but their antitoxin partners, VapB and FitA, respectively, differ structurally. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.29333e-73

Protein sequences

>NC_019780.1|WP_015229167.1|1495283_1496294_+|kinase
MFSSPVISILRGVLKGDSPSIENQNRLAESQFSFPNISLKTKLDYFPIAYQSIDDTCAKIGFSEAENLVLLWRVWLPLALQIHRKKQQKSSAIIQGILGLQGTGKTTLATILRLILMELGYNTVTLSIDDIYKTYSERQQLQKEDSRLILRGPPNTHDVDLGIELLDNIREGKCPVSIPRFDKSACEGMGDRSHPEIVNKKIDILLFEGWFVGVQPIKEQVFQSPPFPIVTEDDRQFAIDNNRRLEAYLPLWNRLDGLIVLSPIDYRLSQKWRKEAEQKMIAEGKGGMSEADVNQFVEYFWRSLHPELFITPLIESKRGVDVVIEIDSNHLPTRVF
>NC_019780.1|WP_015229166.1|1494941_1495280_+|DUF565-domain-containing-protein
MQNTRLNLLLNNLSSQTQQFFLNPWRKITLLLLSLLSGIFIAVAIVTSAGQNGRLDIIVAAVLLIFTEGISWFVYRRYSSTDERNLGFLEVLNTFKIGFTYSLYIQAFILGS
>NC_019780.1|WP_015229165.1|1493656_1494874_-|FtsX-like-permease-family-protein
MQLIETVRMATTTLTANKLRSSLTMLGIIIGNASVIAMVGIGQGAQELAKNEFQSLGPNTLFITPGSREERQTTFDAPKTLVYEDAKAIEEQVPSIQGVAPQITSNQVISYQGKNSNDSVFGVTPEFLSVRSFEIAEGRFIRDLDLRKNSRVAVLGSEIANRFFGGENPIGKQIRVKNSSFKVVGVMASKGAFLGNNQDDTVYIPLTTMANQIVGRQSIYGINLTFISVSAKDEDSIRAAKFQIENLLRLRHNITGEDDFSVQTQQDVLSIVGTVTGGLTAMLAAIASISLLVGGIGVMNIMLVSVSERTQEIGLRKALGAREKDILTQFLIEATILAVLGGFFGTIIGGGVVILAGTVSPLSSQISVPAVVVSVSVSAGIGLAFGVIPARQAAKLDPIVALRSA
>NC_019780.1|WP_041235756.1|1492432_1493476_+|oxidoreductase
MNSFSRNGNPPLRVGVIGVGNMGQHHTRVLGLLKDVELYGVADINVTRGLDIASKYRVRFFEAYQDLLACVDAVCIAVPTRLHYSVGLACLKAGVHVLIEKPIAANIEEAESLVNAAADNNCILQVGHIERFNPAFQELSNVLKTEDLLALEAHRMSPYSQRANDVSVVLDLMIHDIDLLLELTASSVVKLTASGTKAEDSGYLDYVTATLGFANGAIATLTASKVTHRKVRTIGAHCKKALIEADFLNNEILIHRQTTADYTTNYGQVLYRQDGLIEKVYTSKIEPLHAELEHFVSCVRGGNKPSVGGEQALKALRLASLVEKMAMDGQVWENEVQEGAIISALNY
>NC_019780.1|WP_156800876.1|1491403_1492078_-|hypothetical-protein
MSDHKSHDNSDRADHSLDEIRSQFQEKKSASDSNQEEDALLEIKSQFKQKKSASDESEPSDPVAEIKSQFQSQSQAKSQSQSSDESDSSLNEIKSQFQNKSYQKEEEEHLFEEVKTRYQQQKQVTTSPQKDSQTDELLGSIKHQYQTQKQQAETYDPKQNQEEILKAEQQKQKKRKYLTKKAQEWLEKLDPYSDEGFWFEEFAESYSSRLEAAIDYLAVFEETS
>NC_019780.1|WP_015229161.1|1490620_1491196_-|TerD-family-protein
MSISLTKGERISLEKASPGLEAVFVGLGWDVNKTDTGKDFDLDTSVFLLGTDEKLISDRHLIYFNNLKSPDPENSVEHMGDNLTGAGEGDDEVVIVNLKKVPEEVQKIAFVVTIYDAEKRGQNFGQVNNSFVRLVDVKTKEEVLRYDLTEDYSIETAMIMGELYKKDGQWRMSAVGEGYEGGLPAMLNRYQ
>NC_019780.1|WP_015229160.1|1490005_1490581_-|TerD-family-protein
MGISLQKGERVSLEKVSPGLEAVFVGLGWDVNKTDTGNDFDLDASVFLLGENEKLVSDSHLVFYNNTKSPDPDHSVEHMGDNLTGAGEGDDEVVIINLKKVPDEVQKITFVVTIYDAEKRGQNFGQVSNAFVRLVDVKTKEEVLRYDLTEDYSIETAMIMGELYKKDGQWRMSAIGDGYEGGLPAILNRFS
>NC_019780.1|WP_015229159.1|1486202_1489706_-|WD40-repeat-containing-protein
MIKTASEGKSIQEIAENGLLVAVIVGTIIAVSTQQLAWGLIPSTIALIFNRFNRQQEENFYSYQFSSLKNLIQNHQIEQDNQQINVWELQQKLGEVEQLITELRENQTQETAARESQILELNQLQSIERKQEAIEREVERLSLLENTINNHFDFINQQQENLSQSISDIQTEVVRVNQNSQEAIQELKQELDSVRSSLNSNESSAIKLERLNQLVRQNQQRQTEIQTQLSQIETNYQTLVKQINQQPESDSNVTQETIETLESQIREANSRQTEENQYYQQAIQELKQELDSIRSNQETIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENHYYQQAIQELKQELDNARSNQETIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLHQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPESDSNVNQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDNVRSSLNSNESSAIELERLNQLVRQNQQRQTEIQTQLSQIETNYQTLVEQINQQPEADSNVTQEAIETLESQIREANSRQTEENQYYQQAIQELKQELDSVRSSLNSNESSAIELERLNQLVRQNQQRQTEIQTQLSQIETNYQTLLEQINQQPEEDSNVNLYPDEIITESELEAISTSTSSVPTVESNLVRINCELKKQITPNAGKINAVAFSPNGKQFISGHQNKTIKLWSLETGGEIYSFQDHSQEVLTVAYHPDGEMIASGSRDKTIKLWSVSTGNLLTTLEGHVNEVLGVTFSVDGKILGSCSKDRTVKLWSVEEEKVIDTFNNYEDEVKSIALSADGKWLATGEGNIGQTVRLLQLETRETFTLETDQIAWFPGIHSLAFSPDSNLLVGGRNDHQIILWDVKQQQEIRRLQGHENKIYTVVFHPQRNIIATGSEDKTIKLWNVNAGEEMLTLTGHRKAVLGIAFSPDGHYLISGSQDETLLIWENHYLE
>NC_019780.1|WP_156800875.1|1485984_1486215_+|hypothetical-protein
MGGDGGDGGDGEDGGDGGDGEDGGDGGDGGDGEDGGDGEDGGDGGDGEEKSLPLLPCLPCLPFLPCTFLGGTIYSR
>NC_019780.1|WP_015229157.1|1484833_1485817_-|SDR-family-oxidoreductase
MDILIAGATGTLGRQVVRRALDEGHQVRCLVRNPRKATFLKEWGANLVKGDLCKPETLPRTLEGIDAVIDAATARPTDSLTVKEVDWEGKVNLIQATKAADVNRYVFFSILNAENYPDVPMMNIKYCTEQFLAEADLDYTILKPCGFMQGLIPQYAVPILDNQAVWVTGESTPIAYMDTLDLAKFAVRALEVPETAKRSFPLAGSRAWTAEEIINLCENLSGKNAKISRLPMGLLQFLSRAMRFFEWTRNASDRLIFANVLVSGKPFDAEMSEVYDLFGLNPNEMTTVETYLQEYFSRIMKKLKEINYEKEKSKKKKKTPFKSKSKS
>NC_019780.1|WP_015229168.1|1496665_1497244_-|tetratricopeptide-repeat-protein
MLELNQNPTEIIALVTVAIILLSVGIILGRSFLLSQRFQKAQKLYEEEKYGDAIPVFQKIIERQKSNDLARLLLGKSLVQKGNLTEAISTFETLTQSSPKNVDGYIELGKVYMKQGKIDSAIAQFQQATKIKPNKFAEPHRVLGLALKEKGETKAAIASLEKAKKLYSSQKSYPMIEAIDEEIDTITEQSKK
>NC_019780.1|WP_015229169.1|1497246_1498197_-|homogentisate-phytyltransferase
MNQVTSNIEKNIFREPRQWLKSLGKFSRPHTIIGTSLSVLALFLIAIALSNISLNWTIFNPLIFPWTACLCGNVYIVGLNQLQDVSIDKINKPNLPIASGEFSEKQAQWIVNITGILAIIIAVISSQWLLLTITVSLAIGTAYSLPPIRLKRFPFWAALCIFTVRGVIVNLGLFLHFNQTINQQQLIPPAIWALTLFILIFTIAIAIFKDVPDLEGDKQYNITTFTLLLGKNTILNITRIIISVCYLGVIIASFLLLPDVNPLFVGMTHGSLFLLLWWRSQTVDLENKSSIAQFYQFIWKLFYLEYLLFPIACFLA
>NC_019780.1|WP_015229170.1|1498262_1499129_-|methyltransferase-domain-containing-protein
MSRNLEQEIKDFYDASSSLWENIWGEHMHHGYYGRNGRNKVPRRQAQIDIIEELLYWGNLHNPETPPQNILDVGCGIGGSTLYLAQKFNATAQGVTLSPEQAKRAQERATEVNLGERVQFQVANALNLPFSDESFDLIWSLESGEHFPDKAKFLQEAYRVLKPGGMLLMATWCHRPTDSLAGELTADEKRHLAEIYRVYCLPYVISLPEYRSIAQEVGFNNIIVDDWSQAVDPFWNIVIDSAFNPQAIMGLIESGWKTIEAALSLGLMSRGYRRGLIRFGVLQGIRKA
>NC_019780.1|WP_015229171.1|1499759_1500005_+|Arc-family-DNA-binding-protein
MTTTITLNNLPDELYNRLKMAAKANHRSINSEVIACLEKSLVSAQVSPEERLRRTRDLRSSLKQENFNLEEIDREIHSGRL
>NC_019780.1|WP_015229172.1|1500001_1500403_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MIVVDTNIISYFYLPTEKTVDVERLFIQQPEWAAPSIWRSEFRNVLALYLRKQLLTFDQAYAIQSEAEMLLSENEFEVTSFDVLRLVQKSNCSAYDCEFVALAMQLQTVLITEDKKILENFPAIAINLVDATK
>NC_019780.1|WP_015229173.1|1500418_1501096_-|flagellar-motor-protein
MLKRKRYWEEETEETNIWTSFTDLMSNAFMILSLLLFITLIRLFLITQENQQLKKELEQGKETPPILIIQDSGEFKFQSGSAVLPSPLKTYIRNTLVDKIEEITAGNQTYSVEIIGHTDGQILGGGNSNLDRNLEKVANGNLPITELQPGSNADLGLMRSLAVVKELQGIKAQGRLQNLQFHAYSAAQLFLPNSQGFAAVDRAQNSSRRRIEIRFSPLGEAEVIR
>NC_019780.1|WP_015229174.1|1501117_1501537_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MIILDTNVVSELMKINPSIKVIKWVASYSPQNLFTTTITQAEILYGLAILPLGKRRNDLEESAQKMFEVEFKNRVLAFDTKAAIIFSEIAAKRRQLGKPISQADAQIAAIAKSYGASIATRNVSDFEDCNILIINPWSE
>NC_019780.1|WP_015229175.1|1501533_1501785_-|hypothetical-protein
MKKLTLDNLPPEIEAWLNRRARERGNSLEEEIQDILKYVKANEEKNIGNLASNIQDLFVPLGGVDLPEIPREAIRDLPSFEEE
>NC_019780.1|WP_015229177.1|1503766_1504141_-|hypothetical-protein
MKLLLDQGLPRSASTLLSAKGIDTIHVGEIGLSSAQDREILEKAGENGYVVVTLDADFHTLLAFTEAVYPSVIRIRIEGLRAEALTNLLVNTITECEQDLIEGSAVIIEPHRIRLRRLPLLNSI
>NC_019780.1|WP_041235758.1|1504124_1504376_-|DUF433-domain-containing-protein
MINQQLDRITSDSTRMNGQPCIRNLRLTVRRVIELLAIYPDREELRQEFPELEDEDIQQALIYASTCMDDRIIPLSKNHETIT

Crispr_ID: NC_019780_19

• CRISPR_ID: NC_019780_19
• CRISPR_location: 1527589-1527707
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_19

Consensus_repeat	Method
TGGCGTTGGGTTTCGTTTTCTCCACCCAACCT	CRISPRCasFinder

spacers of NC_019780_19

>19.1|1527621|55|NC_019780|CRISPRCasFinder
ACATTTTATCTTTTCCCCCCAATCATCGGGGGGTTAGGGGGGATTATTCCTTGAT

CRISPR arrays and Neighbor proteins around NC_019780_19

CRISPR arrays

The CRISPR arrays of NC_019780_19

>merge|NC_019780|19|1527589-1527707|CRISPRCasFinder
TGGCGTTGGGTTTCGTTTTCTCCACCCAACCTACATTTTATCTTTTCCCCCCAATCATCGGGGGGTTAGGGGGGATTATTCCTTGATTGGCGTTGGGTTTCGTTTTCTCCACCCAACCT

>NC_019780|19|19|1527589-1527707|CRISPRCasFinder
TGGCGTTGGGTTTCGTTTTCTCCACCCAACCT	ACATTTTATCTTTTCCCCCCAATCATCGGGGGGTTAGGGGGGATTATTCCTTGAT
TGGCGTTGGGTTTCGTTTTCTCCACCCAACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800703.1|1531549_1531693_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229197.1|1524726_1525056_-|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|238126
NC_019780.1|WP_015229195.1|1523492_1524137_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_041235759.1|1524132_1524690_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_015229190.1|1517499_1517724_+|hypothetical-protein	unknown	unknown	gnl|CDD|367139
NC_019780.1|WP_156800706.1|1532256_1532508_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229193.1|1519847_1520288_+|Ycf66-protein-N-terminus	unknown	unknown	gnl|CDD|369367
NC_019780.1|WP_015229205.1|1531855_1531993_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229191.1|1518039_1518957_+|EamA-family-transporter	unknown	unknown	gnl|CDD|227339
NC_019780.1|WP_015229199.1|1526237_1527518_-|TldD/PmbA-family-protein	unknown	unknown	gnl|CDD|223389
NC_019780.1|WP_015229205.1|1532470_1532608_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229198.1|1525182_1525962_+|hypothetical-protein	unknown	unknown	gnl|CDD|227310
NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein	unknown	unknown	gnl|CDD|224214
NC_019780.1|WP_015229202.1|1528795_1530400_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|224157
NC_019780.1|WP_015229194.1|1520384_1523267_+|isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235588
NC_019780.1|WP_156800707.1|1532635_1532899_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229201.1|1528472_1528784_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229200.1|1527906_1528242_+|DUF4278-domain-containing-protein	unknown	unknown	gnl|CDD|372912
NC_019780.1|WP_015229192.1|1518953_1519700_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_019780.1|WP_015229206.1|1532120_1532294_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229197.1|1524726_1525056_-|(2Fe-2S)-binding-protein	gnl|CDD|238126	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.	1.81873e-10
NC_019780.1|WP_015229195.1|1523492_1524137_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.32016e-23
NC_019780.1|WP_041235759.1|1524132_1524690_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	5.50194e-24
NC_019780.1|WP_015229190.1|1517499_1517724_+|hypothetical-protein	gnl|CDD|367139	pfam02672, CP12, CP12 domain. The function of this domain is unknown, it does contain three conserved cysteines and a histidine, that suggests this may be a zinc binding domain (Bateman A pers. observation). This domain is found associated with CBS domains in some proteins pfam00571.	1.55458e-24
NC_019780.1|WP_015229193.1|1519847_1520288_+|Ycf66-protein-N-terminus	gnl|CDD|369367	pfam07444, Ycf66_N, Ycf66 protein N-terminus. This family represents the N-terminus (approximately 80 residues) of Ycf66, a protein that seems to be restricted to eukaryotes that contain chloroplasts and to cyanobacteria.	1.66507e-35
NC_019780.1|WP_015229191.1|1518039_1518957_+|EamA-family-transporter	gnl|CDD|227339	COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism].	3.90394e-10
NC_019780.1|WP_015229199.1|1526237_1527518_-|TldD/PmbA-family-protein	gnl|CDD|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	4.04918e-78
NC_019780.1|WP_015229198.1|1525182_1525962_+|hypothetical-protein	gnl|CDD|227310	COG4976, COG4976, Predicted methyltransferase (contains TPR repeat) [General function prediction only].	0.00940046
NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein	gnl|CDD|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	7.79764e-50
NC_019780.1|WP_015229202.1|1528795_1530400_-|MBL-fold-metallo-hydrolase	gnl|CDD|224157	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis].	2.85715e-71
NC_019780.1|WP_015229194.1|1520384_1523267_+|isoleucine--tRNA-ligase	gnl|CDD|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NC_019780.1|WP_015229200.1|1527906_1528242_+|DUF4278-domain-containing-protein	gnl|CDD|372912	pfam14105, DUF4278, Domain of unknown function (DUF4278). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 58 and 136 amino acids in length. There is a single completely conserved residue R that may be functionally important.	1.14881e-26
NC_019780.1|WP_015229192.1|1518953_1519700_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.44489e-62

Protein sequences

>NC_019780.1|WP_015229199.1|1526237_1527518_-|TldD/PmbA-family-protein
MIDPEEVLEKARSAGAEEAEVYQVISRGHPVYFEANRLKQLETVESEGIALRVWRDRSPGVTVAYGDADANELVTRALGLCALNTPASIELTPNHQQVYPSQGKLISPESLITEGKSAIEELLNYNSSVLCTGELDCEQHTTRLLNTQGTDCQYTEISTSAFLQVEWVRGEDFLGIADGSESSEEIDLHTIKKRICQAMNWASVTVSPPQGRVPIIFTPKAANLFWETVIAALNGKQVWEGTSPWGDRSHEQVISDQITLKQDPTRNPERCPFDDEGTSTRELTLINQGRIEQFYTDRAIGRKLGIGSTGNGFRPSLGRYPTPSLINLIVTPGNGDLQDLITQLDDGLVIDQLLGEDADLSGDFSANIELGYRVQNGQITGRVKDTMVAGNIYTAFNHLLALGGDSQINGSYVTPSLLVEGLSVVS
>NC_019780.1|WP_015229198.1|1525182_1525962_+|hypothetical-protein
MSNDSGVKTDEKKQHFDDIYMESTPVPFKERIIDALDYISDDNNRQTFDRLILPWCEKQEGKVIPYVDLCCCFGNTTLAIAHNMTVEEIRENWKDAATAQKPLKPRRLHLQTSGIDLSENALQYAENAGIFDRTIQANLNQPSAEKKAAVLNTMKEADILVSTASLVYLEESAIEELISTFANAPREGYCLVNFLNPFGLEKADATKRILLQNLDFVGSTATRHRRMSPLEQENYPGEEWSLLEIWVLKRKGLKQKVET
>NC_019780.1|WP_015229197.1|1524726_1525056_-|(2Fe-2S)-binding-protein
MPQITAQGKTFTCDRGENLRDVLLKNKVDLYNEAASFINCYGLGTCGTCTVEIEGEVSAPSWQEKARLSLPPHHPNTTRRLACQVQVLGDVTVKKYEGFWGHEEKVKWT
>NC_019780.1|WP_041235759.1|1524132_1524690_+|Uma2-family-endonuclease
MKMITDQELTLEQFLNLPQDDVTYEFFNGKVTPKMFPKRFHSRLTVALCLILEQWRKNQGEVGIEWSVILEKDGKSWAPVPDLLYISNQRLPLNRFEDEACPFPPELVIEIISSGQTFGELTEKATSYLKAGVDRVWLVDPKAQTITIFSFNYLPETKRKDDSLNDDLFPDLDITVGEVFQKAGW
>NC_019780.1|WP_015229195.1|1523492_1524137_+|Uma2-family-endonuclease
MVTQIKKNVKTETWIDSSWDNYLQVLETLPDEKGKSYYHHQQYRIEMSPLGNSHASDHSLINYIVHLYGTLKGIELNGKDNPTLRKPNFREAQADLAFYVGKNANVIPWGTSIINLDQYPAPNLVIEIASSSLADDFGKKRLLYEDLAVEEYWVVDVKKAQVTAFKIEKQGSYRLNTSQVLPNLEISLVTEALLQSRETTHTQVGNWLLQQFQN
>NC_019780.1|WP_015229194.1|1520384_1523267_+|isoleucine--tRNA-ligase
MTTNKSYKDTINLPKTDFAMRANAKQREPEIQEFWQQEQVYETLSQQNPKEVFVLHDGPPYANGSLHMGHALNKILKDIINKYKLLQGYKVRYVPGWDCHGLPIELKVLQNIEEKDRANLTPIKLRKKAAKFANKTIDTQRKGFKRYGVWGDWENPYLTLNPAYEAAQIGVFGEMALKGYIYRGLKPVHWSPSSKTALAEAELEYPEGHTSPSIYAVFPVTALGEDAKASLGDYLFSLGVAIWTTTPWTIPGNLAVAVNPDLNYAVVERSGDNNDCRYLIVAADLVEKLSATLEASLTVKTTLPGKALEHCKYRHPLFDRESEILIGGDYITTESGTGLVHTAPGHGQEDYVVGMRYGLPILSPVDEQGTFTQEAGKFAGLAVLDGGNDAIIEALQTANSLLKQEPYQHKYPYDWRTKKPTIFRATEQWFASVEGFRDAALSAIEQVNWLPQQGENRIRSMVSQRSDWCISRQRSWGVPIPVFYDEETNEPLLTPETIAHVQNIIAEKGSDAWWELSTEELLPPEYRDNGRTYRKGTDTMDVWFDSGSSWAAVAKQREELNYPVDMYLEGSDQHRGWFQSSLLTSVATQGVAPYKTVLTHGFVLDEKGYKMSKSLGNVVDPAVIIEGGKNQKQEPAYGADILRLWASSVDYSADVPIGQGILKQLADAYRKIRNTVRFLLGNLHDFDPKYHGVLDENLPSLDRYMLHRTSEVFEEITAAFEEYEFFRFFQTVQNFCVVDLSNFYLDIAKDRLYISDTNSLRRRSCQTVLAIIVENLARAIAPVLCHTAEDIWQNIPYPTPHKSVFASGWIPKETGWKNPELGESWSKLREIRGEVNKVMEQARNEKLIGASLEAKVLLYVPDTGLREQLSQMNPTESIGEGLNVDELRYLFLASQVALVETSEVVKTAPYYSETELVSVGIIHADGEKCDRCWNYSPTVGQFENDPTICDRCHHALAGNF
>NC_019780.1|WP_015229193.1|1519847_1520288_+|Ycf66-protein-N-terminus
MLALLLALAVALASFLLYFAAFFFPEVHRKSDFYWSGLGLFYGLVLWVCAGRITGGVLLGQTASVALLLWFGTQTLILRRVLASPSEKTNISQSVASRLQSLSPLKLWQKNSKQDTQTTPSVTSSSTQETDSIASEKSSSQETDQS
>NC_019780.1|WP_015229192.1|1518953_1519700_-|response-regulator-transcription-factor
MKSISIHIIEGNPHLRSLLGWHLQQAKFSVRRSGSIQQAKPFLEAGQLILVILDADLSDGESLEFCYWLHCYSQSLILMLSARGAESDIVAGLKAGADDYLVKPFGMREFMARVEALSRRFREVNVPLLLDYGQLKINLAQRKVYLQGKKVEFTPQEFSLLYVLAQAQGIALSRLELLRRAWPEAIDNLRTIDTHILSLRKKLEINPKQPQLIQTVRNVGYRLNLELLQQESARSIPKPLSLHESKLS
>NC_019780.1|WP_015229191.1|1518039_1518957_+|EamA-family-transporter
MFGFIAMLLAATFLSMQNVVVRVFFQGNAELGGLLPSDFEHTILFLQTRTFFMVIFLSLLAWRIYPQTFLEIVKGKQELKSPLISGSIYFFTVILLYLAIGQIPAGIAVTLFFVHPIIAMLWGWWFNHLRPTIFRGVILMGVVIGLILVTPQLQADVSSEFTLGVICALGAGVGFALYAVTAQTALLNFHALSFSLVTFTLIFIFSSFTLLFLNITISPNVWLPLLIWSLGSGLITVGGLVFTNVGIRLVGASTATLVGSIEPALTAVLAWIILQESIEPRQMIGVAIVTISIAGLGLDRSAVKP
>NC_019780.1|WP_015229190.1|1517499_1517724_+|hypothetical-protein
MSNIEKEIEQQREEAREVCGSEGTESQDCAVAWDTVEELQAEYAHQRSEKPKKTSLEQYCDENPEAAECRVYDD
>NC_019780.1|WP_015229200.1|1527906_1528242_+|DUF4278-domain-containing-protein
MKLTYRGVQYENNTPVVETTEGEVAGKYRGLDWRFHELKKPLHLQPRANLTYRGITYEVHPALTSDVSVKPNAAYISTQAKARGLMRNQVLNFKKRQKSMLSRANAEIGLK
>NC_019780.1|WP_015229201.1|1528472_1528784_+|hypothetical-protein
MLHRKLHQFCNEGREVCIFLRDQQRWIEEARIVSLEGDLMTVRYEIDEDEEISSWEEIIRIESIASITHRLASVSRADIDPLISDDCPEAEQIYPRYPDYPQE
>NC_019780.1|WP_015229202.1|1528795_1530400_-|MBL-fold-metallo-hydrolase
MSDFSSPLCFYSYAVGHQGEGVCFFLQLGEHRLLLDCGLHEVEDLITAQANLPSIDLILCSHAHPDHARGLLALHRAFPDVPIYASEVTVQLLHLNWLEEEEIPSLAHALPTRSRIALADNLTVKLYPAGHLPGACAIALTYITDQREHRLLYTGDFFLSNSRLAEGLSIEALRDFSPDVMIVEGSYGTARHPHRRQQENQLMARLSETLTQGKNIVLPVPYFGLAQEILVLLRSHHQFTGRDLDIWVEATIAPVCEAYLSILPHLPDSIQNFAKHQPLFWDDRVRPRVRLLTNKSDLNQAATLLLVEENSNWEDILRHYNQQQWVIFQAETPTPLKSPARSVPWHTETYLLAQHSDGLGTTQLIHNLRPQHVIFVHGLKNYLIDLTSLEELQNRYHLHLPEAKTEVELHIGEKFLQPAAPAETNYEGEVKEAEKLINIQLPSSIINDPRWHNFSDTGLVKARWQGEELVLRGLSQKEILQQTSDEKLPRETASCGNCRHRQRQHCRNPASPLYGFQVTPEGYCPVFEPLPETD
>NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein
MRKLKSLFALLKETFTQWLEHKAPRLAAALAYYMVFSLAPLLVIAIAIAGAIFGEDAARGEIVARISGFVGQDAASVIEKAITNASQPDLSNVASLISIAVLLFGASGVFAQLQDALNTIWSVQPRPGRVVRQFISKRILSFAMVLGLGLFVILSLLLTAAISALSQLELLPGFPFLWKTLSLAVSFGLVTLFFALVFKFLPDAKVAWSDVWMGAIITSILFAIGRSLLGWYLGKTSFASTYGAAGSLIVLLAWIYYSAQILFLGAEFTEVYARKYGSHITPNCHSMRITTTPLDEQ
>NC_019780.1|WP_156800703.1|1531549_1531693_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGHWSLVTGHWSLVTDYCSSRGVVVILME
>NC_019780.1|WP_015229205.1|1531855_1531993_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_015229206.1|1532120_1532294_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVLLMTGHWSLGIKK
>NC_019780.1|WP_156800706.1|1532256_1532508_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLVTENQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_015229205.1|1532470_1532608_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_156800707.1|1532635_1532899_-|hypothetical-protein
MTGHWSLVTDHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLVTDHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLGIKK

Crispr_ID: NC_019780_20

• CRISPR_ID: NC_019780_20
• CRISPR_location: 1535385-1535479
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_20

Consensus_repeat	Method
AGAAGTATCAGCCCCCTAACCCCCAATCTTG	CRISPRCasFinder

spacers of NC_019780_20

>20.1|1535416|33|NC_019780|CRISPRCasFinder
GGGGAACTAGATGGCATCTCCTTTTCAGATCTG

CRISPR arrays and Neighbor proteins around NC_019780_20

CRISPR arrays

The CRISPR arrays of NC_019780_20

>merge|NC_019780|20|1535385-1535479|CRISPRCasFinder
AGAAGTATCAGCCCCCTAACCCCCAATCTTGGGGGAACTAGATGGCATCTCCTTTTCAGATCTGAGAAGTATCAGCCCCCTAACCCCCAATCTTG

>NC_019780|20|20|1535385-1535479|CRISPRCasFinder
AGAAGTATCAGCCCCCTAACCCCCAATCTTG	GGGGAACTAGATGGCATCTCCTTTTCAGATCTG
AGAAGTATCAGCCCCCTAACCCCCAATCTTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800703.1|1531549_1531693_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229219.1|1551012_1552797_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015229211.1|1535147_1535363_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229218.1|1550290_1550533_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800707.1|1532635_1532899_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229212.1|1535644_1537528_+|ArsA-family-ATPase	unknown	unknown	gnl|CDD|349755
NC_019780.1|WP_015229216.1|1544299_1545727_+|sodium/proline-symporter	unknown	unknown	gnl|CDD|271369
NC_019780.1|WP_015229205.1|1531855_1531993_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229213.1|1537546_1538977_+|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl|CDD|274644
NC_019780.1|WP_015229205.1|1532470_1532608_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229215.1|1543397_1544159_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187554
NC_019780.1|WP_015229209.1|1533062_1534301_+|tryptophan-synthase-subunit-beta	unknown	unknown	gnl|CDD|235288
NC_019780.1|WP_156800709.1|1539198_1540845_+|iron-uptake-porin	unknown	unknown	gnl|CDD|335962
NC_019780.1|WP_015229220.1|1557308_1557725_+|IS200/IS605-family-transposase	unknown	unknown	gnl|CDD|376616
NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein	unknown	unknown	gnl|CDD|224214
NC_019780.1|WP_015228746.1|1553366_1555268_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015229217.1|1545879_1549488_+|methionine-synthase	unknown	unknown	gnl|CDD|273959
NC_019780.1|WP_156800706.1|1532256_1532508_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229210.1|1534300_1534930_+|ribonuclease-D	unknown	unknown	gnl|CDD|223426
NC_019780.1|WP_015229206.1|1532120_1532294_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015229219.1|1551012_1552797_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	4.3e-51	168.3	0.0
NC_019780.1|WP_015228746.1|1553366_1555268_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	2.8e-50	165.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229212.1|1535644_1537528_+|ArsA-family-ATPase	gnl|CDD|349755	cd02035, ArsA, Arsenical pump-driving ATPase ArsA. ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.	1.81948e-53
NC_019780.1|WP_015229210.1|1534300_1534930_+|ribonuclease-D	gnl|CDD|223426	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis].	1.70273e-77
NC_019780.1|WP_015229220.1|1557308_1557725_+|IS200/IS605-family-transposase	gnl|CDD|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.40914e-42
NC_019780.1|WP_015229209.1|1533062_1534301_+|tryptophan-synthase-subunit-beta	gnl|CDD|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NC_019780.1|WP_015229216.1|1544299_1545727_+|sodium/proline-symporter	gnl|CDD|271369	cd11475, SLC5sbd_PutP, Na(+)/proline cotransporter PutP and related proteins; solute binding domain. Escherichia coli PutP catalyzes the Na+-coupled uptake of proline with a stoichiometry of 1:1. The putP gene is part of the put operon; this operon in addition encodes a proline dehydrogenase, allowing the use of proline as a source of nitrogen and/or carbon. This subfamily also includes the Bacillus subtilis Na+/proline cotransporter (OpuE) which has an osmoprotective instead of catabolic role. Expression of the opuE gene is under osmotic control and different sigma factors contribute to its regulation; it is also a putative CcpA-activated gene. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	2.65575e-150
NC_019780.1|WP_015228746.1|1553366_1555268_-|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	7.71015e-124
NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein	gnl|CDD|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	7.79764e-50
NC_019780.1|WP_015229215.1|1543397_1544159_-|SDR-family-oxidoreductase	gnl|CDD|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.98094e-65
NC_019780.1|WP_015229213.1|1537546_1538977_+|deoxyribodipyrimidine-photo-lyase	gnl|CDD|274644	TIGR03556, photolyase_8HDF, deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420. [DNA metabolism, DNA replication, recombination, and repair].	0
NC_019780.1|WP_015229217.1|1545879_1549488_+|methionine-synthase	gnl|CDD|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
NC_019780.1|WP_015229219.1|1551012_1552797_-|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.39039e-129
NC_019780.1|WP_156800709.1|1539198_1540845_+|iron-uptake-porin	gnl|CDD|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	5.74756e-17

Protein sequences

>NC_019780.1|WP_015229211.1|1535147_1535363_+|hypothetical-protein
MHIKQKISEEKKENEESRRTLVLQLLKQELALNCGEVCSIGDESLEGWLILGSVEARGLNHFLPRCKFRSV
>NC_019780.1|WP_015229210.1|1534300_1534930_+|ribonuclease-D
MNLSKLQVCDRDLSPELLEQYKASPAVAVDTETMGLNPMRDRLCLVQLCDAEGNVTMIRIAKGQQKAEYLQQLLAAQNVEKVFHFARFDVAQFYNTFGVMTTPIFCTKIASKMARTYTSSHGLKSLVQELEQIELDKRSQSSDWGNIENLSPEQLSYAANDVRYLISLKTRLEKMLQREERWELTQECFTCIPTFVKLDLQQFDHIFEH
>NC_019780.1|WP_015229209.1|1533062_1534301_+|tryptophan-synthase-subunit-beta
MTVSSVSSVFPTSQYPDAKGRFGEFGGKYVPETLIHALSELETAYEQIRRDPDYNQQLTQLLNDYVGRPSPLYFAERLSEHYAQPNGTKPQIYLKREDLNHTGAHKINNAIAQVLLARKMGKKRIIAETGAGQHGVATATVCARFGLDCVIYMGVHDMERQALNVFRMRLMGATVEPVEAGNGTLKDATSQAIRDWVTNVETTHYILGSVAGPHPYPMIVRDFHAIIGKETREQCQEKWGGLPDILLACVGGGSNAMGLFAEFVSEPAIRLIGVEAGGEGINSPKHAATLTRGKPGVLHGAMSYLLQDGEGQVTEAHSISAGLDYPGVGPEHSYLKDSNRAEYYSVTDAEAVEAFQRMSRLEGIIPALETAHAFAYLETLCPQLSGSPKIVINCSGRGDKDVQTVAKYLEEH
>NC_019780.1|WP_156800707.1|1532635_1532899_-|hypothetical-protein
MTGHWSLVTDHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLVTDHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLGIKK
>NC_019780.1|WP_015229205.1|1532470_1532608_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_156800706.1|1532256_1532508_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGHWESRSEKREFRSEFKCLFFSFLSTRFLMTGHWSLVTENQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_015229206.1|1532120_1532294_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVLLMTGHWSLGIKK
>NC_019780.1|WP_015229205.1|1531855_1531993_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGNQEVRRENLEVSLNAYFSLFSLLVS
>NC_019780.1|WP_156800703.1|1531549_1531693_-|hypothetical-protein
MPIFLFSLYSFLNDWSLVTGHWSLVTGHWSLVTDYCSSRGVVVILME
>NC_019780.1|WP_156800701.1|1530698_1531592_+|YihY-family-inner-membrane-protein
MRKLKSLFALLKETFTQWLEHKAPRLAAALAYYMVFSLAPLLVIAIAIAGAIFGEDAARGEIVARISGFVGQDAASVIEKAITNASQPDLSNVASLISIAVLLFGASGVFAQLQDALNTIWSVQPRPGRVVRQFISKRILSFAMVLGLGLFVILSLLLTAAISALSQLELLPGFPFLWKTLSLAVSFGLVTLFFALVFKFLPDAKVAWSDVWMGAIITSILFAIGRSLLGWYLGKTSFASTYGAAGSLIVLLAWIYYSAQILFLGAEFTEVYARKYGSHITPNCHSMRITTTPLDEQ
>NC_019780.1|WP_015229212.1|1535644_1537528_+|ArsA-family-ATPase
MQQDNNLKLTLFSGKGGVGKTTVSCSFARNLARSHPQDRILLLSTDPAHSVGDVLDLPVGETATPLSDLPNLQVRALNAVTLLGEFKERYGDTLEVLVERGSFVDGEDLTPAWDLGWPGLDELMGVLEIQRLFNEDEVDRIVVDMAPSGHSLHLFEMMDFLDNFLGGLEGFQEKHRVMVRSLSRNYTPDETDEFLDKMRDDLARGRSMLQDEQKTACIVGAIAQPMSWLETQDFITSLQALKIPCGGAFVNRIIPNDSNSPATLDRFYEQQQLLTQFRDLLQPLPLYGVPEQDSDPVGGASLDELFPKIQPVEEITLIEQPETISFPEAIPPGLPDWIEENSQLLLIGGKGGVGKTTTAASIGWGMAQRHPDKKIRLMSIDPAHSLADALDAPLGHDPVAVTDNLSAQEIDSDLLLDQFREDYLWELAEMMSGGNGDTEGLQLAYGPESWRQMVSQGLPGVDEMLALLTVVDLLEAGEQDLIIVDTAPTGHLLRFLEMPTALTDWLSWIFKLWMKYQAVAGHMELVTRLRQLRKRVVNTHKKLQDADYTEFIGVLQNQSAIVAETQRMTEALEEQGISQRYIIHNRYHPHQEIDVNRFPNQTVVRLPLLPRSIPALERIEGAAKLLF
>NC_019780.1|WP_015229213.1|1537546_1538977_+|deoxyribodipyrimidine-photo-lyase
MELVLFWHRRDLRLKDNIGLFQAHQKTAKVLGVFCFDPQLLKKDQVAPARIKYLLGCLQELQENYRRVGSDLLILNADPVTAISNLAQTLNATGVFWNQDIEPYSRKRDRAVQSALEEQGITVQTFWDQLLHSPGDILTKSDEPYKVYTPFWKNWQKQDKATPTGEIKSLDGLTSEEHRKADTVGVIPLPKLNDLGFSWENELPLTPGESAARDRLQWFCDRAILDYDQNRNYPAIEGTSILSAALKFGAIGIREVWEATNQAEENTRSDEARDNINAWRQELAWREFYQHALYFFPELAKGPYREQFKSFPWENNQDHFEAWCNGETGYPIVDAAMRQLNTTGWMHNRCRMIVASFLTKDLIINWQWGEAYFMQTLFDGDLAANNGGWQWSASSGMDPKPLRIFNPASQAQKFDPDGEYIRYWLPELNSIDTGNLLTGNISPLEREGLGYTAPIIDHKQQQRKFKQLYQQQKDNL
>NC_019780.1|WP_156800709.1|1539198_1540845_+|iron-uptake-porin
MNISWRKLLMVAPSVLGVFAMAQTTLADETESQSEILDQVETYHNGGASLDQVNSVFQLRDVSPGDWAFEALRNLVERYGCIAGYPDGTFRGNRALTRYEFAAGLNACLQQIERLIAANTGGSGDVNQGDLATLQRLTQEFEAELATLGTRVDNLEGRVGFLEDNQFSTTTKLNGSVVFDLAVAGGDQKAVGGQAIFSPPGVNFDNDNDDVEEGIHFTNRVRINLDSSFTGRDRLRTRLETANNITLGGATGASATARNLGAGGGGIRLDQLMYSFPVGDNIIAHVGATGVLVDDIFDAGSTASFAYGSINLFTAYNNLIYDVSSSDSAGFGANIVLNDLIQLDLGYFTGSGATDPDEGLFGGNYSAGAQLGFDFGEVDLSLAYLRSYQVGGNLSGFVGSPAAATPFPDDNGNNLANSADHFGVHANWRVSQRFSVGGYFGLVDAQTEVEPQASAEIVNWLVNTSFPDLGKEGSVLILAFGQPPKLTDSGGDAEATDPDTGYLLNLEYQYPINNNISIVPGGYVLFNPDHNDNNDTIYVGRLRTLFSF
>NC_019780.1|WP_015229215.1|1543397_1544159_-|SDR-family-oxidoreductase
MSTAKILVTGATGRTGSIVIGKLWEQKNNFQAFGFARSKEKIKEIFGSTEGFYLGDIRDQDSLKPALKDCEALIITTSAVPQMKQPPQEGERPEFTYPENATPEIIDYQGQINQIDLAKEAGVNHIVLMGSMGGTNEDHPLNKLGNGNILIWKRKAEQYLIDSGIDYTIIRAGGLLNEPGGKRQLLVGKNDTLLNRESPTIPREDVATLIIQALSIPEARNKAFDVVSESEAMSQGKATTDFAALFSQTTSGL
>NC_019780.1|WP_015229216.1|1544299_1545727_+|sodium/proline-symporter
MTQSSAIVLTFCLFLLLFVAVGIYSSRYQQRTTTDYLLASRNVNPWFTALSALATGQSAFLFTGQVGYAYTTGISAIWLLIGWAIGDYMAWWFVFKRLREVSEQDNAETVSAVLGQGKLRIIASLSALITVIFLGTYAAAQLVASSKALNAVFGWNYQFGIIIGAVIVVLYCFSGGIRASIWTDAVQSMVMLGSLLILFTIAIGECQGFNGLWTQLSAIDPDLTRFNPTRLQWGFLPFFIGWIVAGFGAVGQPHIMVRAMAINSPHNLTLARNVKVIVGLVTSCTAITIGLAARVLTPDLVANSDPELALPYLALDLLPAVLVGLMLAGLFSATVSTADSQILSCSAALSQDLLPQTNQSYKLAKLATLTVTAIVLMIALSGSNSVFTLVTFAWSALASSLGPVAMVRIFERPLNSIVAVTMMVTGLTTALIWDQMGLSSALYEALPGMAMGLIVYGIWWGLFASKTKAEETDIS
>NC_019780.1|WP_015229217.1|1545879_1549488_+|methionine-synthase
MTTTQTKVKSAFLERLHSPERPVLVFDGGMGTSLQRQELTLEDFGTAELEGCNEYLVKSKPEAIEQVHREFLEAGADVIETDSFGSSSVVLAEYNIPEQAYELSKMASELAKRVANEYSTPEKPRFVAGAMGPTTKLPTLAHIDFDTMKESYRVQAEGLYDGGADLFIIETCQDVLQIKSALNAVEELFAQKGDRIPIMVSITMEVMGTMLVGTEIDAALTILEPYNIDILGLNCATGPDKMKEHIKYLSEHSPFTISCIPNAGLPENVGGQAHYKLTPMELRMALMHFVEDLGVQVIGGCCGTRPDHIEQLADIAKELKPAERNPKNECAAASIYSTQNYIQDNSFLIIGERLNASGSKKTRTLLNEEDWDGLVSIAKSQVKEGAHVLDVNVDYVGRDGERDMYEVVSRLVNNVTLPLMVDSTEWTKMEVGLKTAGGKCLINSTNYEDGEERFFKVLELGKKYGAGVVIGTIDEDGMARTAQKKFEIAQRAYRQAVESGIPPSEIFFDSLALPISTGIEEDRVNGKETMESIRLIRENLPECHVMLGVSNLSFGLNSAARVALNSVFLHDAVEAGMDAAIVSASKIVPLAKIEKEHQQICRDLIYDNRQFNEDGICVYDPLTKLTEVFAGKKAEVAASSMENLSIEDKLKQHIIDGERIGLNDVLDEAMKTYPPLDIINKYLLDGMKVVGERFGAGEMQLPFVLQSAETMKAAVAHLEPHMEKDEAGDNAKGTFLIATVKGDVHDIGKNLVDIILSNNGYRVINIGIKQPVDNIIAAYEEHNADCIAMSGLLVKSTAFMKDNLETFNEKGISVPVILGGAALTPKFVYGDCQEVYNGKVVYGKDAFSDLNFMDKLMPAKEAGQWDDLQGFLGEFAEEEDGKAIKAKAKAEKAESNGKAETEENGKAEEPKVVDTTRSEAVEVNVERPTPPFWGYKLLTPDEIPMDEMLWYLDKQALFAGQWQFRKKKSQSREEYDQFLQETVEPILAEWKQRSKAENLLHPQLIYGYYPCCSEGNTLYLFDPKLIEEKGTIPKGTEPIAAFEFPRQRSGQRLCIADFYAPKESGIIDVFPMQAVTVGEIATEYAKELFEADQYTDYLYFHGFGVQAAEALAEWGHARIREELGFGDEDPDNIRDVLAQRYRGSRYSFGYPACPNINDQYKLLDLLETKQINLYMDESEQIYPEQSTTAIVSHHPIARYFSA
>NC_019780.1|WP_015229218.1|1550290_1550533_+|hypothetical-protein
MKMTEKEREQKQAGDQTERQGRDFNTFSQRLVTFSAAGLTIGGVISGTLGGGIGLAIGALTGLGFWLNEDESSKPQYDRQ
>NC_019780.1|WP_015229219.1|1551012_1552797_-|group-II-intron-reverse-transcriptase/maturase
MNTDNRCIKWGDIDWHEVERVVYKLQKRIYKASRRGDVKAVRRLQKLLVKSWSAKVLAVRRVTQDNQGKKTAGVDGVKSLSPVARMKLVNNLKLSSKVKPTRRVKIPKPNGEERPLGIPTMYDRALQALVKLALEPEWEAVFEPNSYGFRAGRSAHDAIRAIFDAIRYKPKYVLDADISKCFDRIDHERLLNKLNTFPTFRRQIRAWLKSGVMEGKEFSPTFEGTPQGGVVSPLLANIALHGMEDKIKSIAGSFDMKRPNGYQLPLRDKKDSVSIIRYADDFVILHKDLAVVHRCKEVVTEWLADMGLELKPSKTRIAHTLENHKEEKAGFNFLGFNIRQYKVGKYTSGRDSKGQILGFKTLTTPSKESQERHYQKICEVIDKYKGQSQAVLIAKLNPIIRGWCNYFSIGVSQKVFSRLDYLIFWKLFKWGIKRHRNKGRKWVKSKYFRRIGGDKWAFATPREGSNPMVLMKHSRTAIIRHVKVKGDKSPYDGDLIYWSSRMGKHPEMPKRTASLLKKQKGKCAHCGLFFRDGDLLEVDHIVPYSKGGKDEYKNWQLLHRHCHDEKTRTDGSYNRVVSIIPEDYRWENDMLVTC
>NC_019780.1|WP_015228746.1|1553366_1555268_-|group-II-intron-reverse-transcriptase/maturase
MNQIRYKCDARTKTFLMLWLGFGFNLMAETEWSQIDWKEVEIRVFKLQKRIYRASQSGDVAKVHKLQRLLLRSWCAKLLAVRRISQDNQGKNTAGIDGVKSLSPKQRLSLAENLTLTGKGKSLRRVWIPKPGRKEKRGLGIPVMEDRARQALLKLALEPEWEAKFEPNSYGFRPGRSCHDACGAIYSAIKQKSKWVLDADISKCFDRINHNVLLQKLNTTPTMARQIRAWLKSGVLDRGDWFPTNEGTPQGGVISPLLANIALHGLEEYIKQWTETWKGKKQTNIKSISLIRYADDFVVLHKDKSIIQQAKTLIEQWLHGLGLEISESKTRICHTLHDTEETKAGFDFLGWNVRQYKVGKRHSGKNTNGNLLGFKTIIKPSDKSIKTHYEKIVEVLDSMKGKSQEVIIDKLNPIIMGWCNYHKTVCSKETFQHIDNSVYNKLRRWTKRRHPNKTLKWCEERYFHLTKEKNLDGEKRNAKWVFSTPSDVPNSPVAGTHELWKHAWTPIERHIKIEGTRSPYDGDWRYWSKRRGEYPGTPKRVATLMKRQKGKCTRCGLYFKDGDVEEVDHIIPKAEGGRDDYKNLQLLHRHCHHQKTAEDRQRQMDNKGQKKTQKKTKKGRKSETKQGSAVNTA
>NC_019780.1|WP_015229220.1|1557308_1557725_+|IS200/IS605-family-transposase
MSIKPRKGSHSVFSVRLHFVFVTHYRRKIITAQMLERLREMSWQVCKKMDCELIEMSGESDHVHLLVDFHPRNSISAVAGSLKSSTSRAMKKDFPEQVRRFYKEGISFWSKSYYVASSGGAPIEKLKDYIKAQNEPKL

Crispr_ID: NC_019780_21

• CRISPR_ID: NC_019780_21
• CRISPR_location: 1608485-1608612
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_21

Consensus_repeat	Method
GTTGGGTTTCACCCAACCTACAA	CRISPRCasFinder

spacers of NC_019780_21

>21.1|1608508|19|NC_019780|CRISPRCasFinder
GTCAGGTTTAGATAGGGGT
>21.2|1608550|40|NC_019780|CRISPRCasFinder
TTCTAAGTTGGGTTTCACCCAACCTACAATTCTGATCTAA

CRISPR arrays and Neighbor proteins around NC_019780_21

CRISPR arrays

The CRISPR arrays of NC_019780_21

>merge|NC_019780|21|1608485-1608612|CRISPRCasFinder
GTTGGGTTTCACCCAACCTACAAGTCAGGTTTAGATAGGGGTGTTGGGTTTCACCCAACCTACAATTCTAAGTTGGGTTTCACCCAACCTACAATTCTGATCTAAGTTGGGTTTCACCCAACCTACAA

>NC_019780|21|21|1608485-1608612|CRISPRCasFinder
GTTGGGTTTCACCCAACCTACAA	GTCAGGTTTAGATAGGGGT
GTTGGGTTTCACCCAACCTACAA	TTCTAAGTTGGGTTTCACCCAACCTACAATTCTGATCTAA
GTTGGGTTTCACCCAACCTACAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229258.1|1595724_1596648_+|TIGR01777-family-protein	unknown	unknown	gnl|CDD|187553
NC_019780.1|WP_015229261.1|1600572_1601346_-|nickel-pincer-cofactor-biosynthesis-protein-LarB	unknown	unknown	gnl|CDD|224605
NC_019780.1|WP_015229272.1|1613295_1613505_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229276.1|1617647_1618241_+|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NC_019780.1|WP_015229259.1|1596673_1599751_+|valine--tRNA-ligase	unknown	unknown	gnl|CDD|235582
NC_019780.1|WP_015229266.1|1605946_1606522_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|99749
NC_019780.1|WP_015229265.1|1605222_1605957_+|DUF554-domain-containing-protein	unknown	unknown	gnl|CDD|377371
NC_019780.1|WP_015229267.1|1606655_1608260_-|radical-SAM-protein	unknown	unknown	gnl|CDD|188475
NC_019780.1|WP_015229269.1|1610462_1611164_-|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|213993
NC_019780.1|WP_015229275.1|1615364_1617068_-|DUF3352-domain-containing-protein	unknown	unknown	gnl|CDD|371750
NC_019780.1|WP_015229270.1|1611286_1612375_+|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|224662
NC_019780.1|WP_015229264.1|1604338_1605112_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl|CDD|179108
NC_019780.1|WP_041235386.1|1612343_1613027_-|hypothetical-protein	unknown	unknown	gnl|CDD|182458
NC_019780.1|WP_015229273.1|1613501_1613780_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl|CDD|225583
NC_019780.1|WP_015229260.1|1599935_1600361_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229274.1|1614078_1615263_-|NAD(P)H-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl|CDD|180969
NC_019780.1|WP_156800877.1|1608756_1610466_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|226651
NC_019780.1|WP_015229262.1|1601580_1603338_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173865
NC_019780.1|WP_015229277.1|1618664_1619351_-|urease-accessory-protein-UreF	unknown	unknown	gnl|CDD|223900
NC_019780.1|WP_015229263.1|1603356_1604247_-|phosphohydrolase	unknown	unknown	gnl|CDD|277324

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229258.1|1595724_1596648_+|TIGR01777-family-protein	gnl|CDD|187553	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8. This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.84409e-143
NC_019780.1|WP_015229261.1|1600572_1601346_-|nickel-pincer-cofactor-biosynthesis-protein-LarB	gnl|CDD|224605	COG1691, COG1691, NCAIR mutase (PurE)-related proteins [General function prediction only].	3.31147e-118
NC_019780.1|WP_015229276.1|1617647_1618241_+|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	2.35361e-99
NC_019780.1|WP_015229259.1|1596673_1599751_+|valine--tRNA-ligase	gnl|CDD|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NC_019780.1|WP_015229266.1|1605946_1606522_-|Uma2-family-endonuclease	gnl|CDD|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.50519e-32
NC_019780.1|WP_015229265.1|1605222_1605957_+|DUF554-domain-containing-protein	gnl|CDD|377371	pfam04474, DUF554, Protein of unknown function (DUF554). Family of uncharacterized prokaryotic proteins. Multiple predicted transmembrane regions suggest that the region is membrane associated.	1.69305e-79
NC_019780.1|WP_015229267.1|1606655_1608260_-|radical-SAM-protein	gnl|CDD|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	5.82282e-97
NC_019780.1|WP_015229262.1|1601580_1603338_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173865	cd08500, PBP2_NikA_DppA_OppA_like_4, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NC_019780.1|WP_015229275.1|1615364_1617068_-|DUF3352-domain-containing-protein	gnl|CDD|371750	pfam11832, DUF3352, Protein of unknown function (DUF3352). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 538 to 575 amino acids in length.	9.41109e-149
NC_019780.1|WP_015229270.1|1611286_1612375_+|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	3.0984e-67
NC_019780.1|WP_015229264.1|1604338_1605112_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl|CDD|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	4.23194e-134
NC_019780.1|WP_041235386.1|1612343_1613027_-|hypothetical-protein	gnl|CDD|182458	PRK10435, cadB, cadaverine/lysine antiporter.	0.00813646
NC_019780.1|WP_015229273.1|1613501_1613780_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl|CDD|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	1.37606e-12
NC_019780.1|WP_015229274.1|1614078_1615263_-|NAD(P)H-quinone-oxidoreductase-subunit-H	gnl|CDD|180969	PRK07415, PRK07415, NAD(P)H-quinone oxidoreductase subunit H; Validated.	0
NC_019780.1|WP_156800877.1|1608756_1610466_+|alpha/beta-fold-hydrolase	gnl|CDD|226651	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only].	3.37023e-62
NC_019780.1|WP_015229269.1|1610462_1611164_-|PHP-domain-containing-protein	gnl|CDD|213993	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound. The PHP domain of this HisPPase family has an unknown function. It has a second domain inserted in the middle that binds adenosine 5-monophosphate (AMP). The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to give histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to the other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	1.1994e-46
NC_019780.1|WP_015229277.1|1618664_1619351_-|urease-accessory-protein-UreF	gnl|CDD|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	4.28718e-40
NC_019780.1|WP_015229263.1|1603356_1604247_-|phosphohydrolase	gnl|CDD|277324	cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	8.35714e-44

Protein sequences

>NC_019780.1|WP_015229267.1|1606655_1608260_-|radical-SAM-protein
MSVFSQERLLFTPASPENNALPVIFAFPNTYNIGITSLGYQVIWATLATREDVAVSRVFTDIQESLPRHPELFGFSVSWELDYINILNLLESFAIPLHSEERGEEHPLIFGGGPVLTANPEPFATFFDLILLGDGEELLPNLIETCKQVRGDDRKTKLKKLAQIPGIYVPSFYEITYDSPEGMITNITSIDADIPSEVQKQTYRGNTLSASTVVTENAAWENIYMVEVVRSCPEMCRFCLASYLTLPFRKASLEGSLIPSIEAGLKVTNRLGLLGASVTQHPEFNDLLDYLSRPDYDDIRLSVSSVRTNTVTEKLARILASRDARSITIAVESGSENVRNIINKKLTNEEIIQAAINAEAGGLKALKLYGMVGIPGEKEADIDATIEMMANLRKAAPSLKLTLGCSTFVPKSHTPFQWFGVNKDSKKRLNYLQKKLRSRGIDFRPESYNWSVIQTLISRGDRRLTPLLELTRHYGDSVGSYKRAFKELKGQLPPLEYYVHQNWETTQILPWSHLKGPLPQTTLEKHLAEAMTNS
>NC_019780.1|WP_015229266.1|1605946_1606522_-|Uma2-family-endonuclease
MVTQLAPKVYTPKEYLALELEAENRHEFINGEIRQMAGGTTKYNELITNLSVLLKPTLRKQGKRFYSENVRLWIPIVNVFTYPDVMILAGEPIYYEESQTTITNPVVIFEVLSNSTRDYDQGQKFRFYRSLETLQEYVLVDQERCSVMVYQRENAKEWNLHILEEFSEVIRLKSVAVEVALPDIYDGVFNQ
>NC_019780.1|WP_015229265.1|1605222_1605957_+|DUF554-domain-containing-protein
MITDFWVKTSGTWINVLTVLIGTIIGLLLKQRLPPKIKEIIPQGIGLLTLWLGFSMAEELSNVEVRNMPGAILGLISMIIGGGLGEWWKIEERLNGIGDFLKKRFRHSGQFTEGFVATSILFCVGPVALVGSINNGLLGDNTLLVLKATMDGISSIPFASRYGIGVGFSVLVIILYQGGISLLAGLFVSNLNDPTNHPLILLITGIGGLMILGIGLNLLEVAKIRVAAFLPALLIPPILLLFIG
>NC_019780.1|WP_015229264.1|1604338_1605112_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MDIIPAIDILGGKCVRLYQGDYNQVEVFNDRAVATAKHWVEQGATRLHLVDLDGAKAGKPMNQRTIAEIVETVVIPVQVGGGLRDRSSIAELISLGVNNVIVGTIAVEEPELVKALCQEFPQQITIGIDARNGKVATRGWLETSEVMAKDLAQQMANQGAAAIIYTDIHRDGTLTGPNLDALRDLAENVSIPIIASGGISSVTDLLSLLSLEPLGVTGAILGRSLYANKIDLKEAVEAVGNGRLQDVPFGDDFSTFA
>NC_019780.1|WP_015229263.1|1603356_1604247_-|phosphohydrolase
MNRRELLTLLGITGIGGIITTQLPNFNLANAQEISDLDLPNYEPRLRFVSLADTGTGNSGQYAVAKAMTKFYRQSPFPIALLAGDNIYNNGEIEKIEAVFERPYQPLLQENVKFYACLGNHDLRIKNGTEEVKYPLFNMQGRYYTFTRSIVQFFALDTNRNADWDHQLEWLDEQLSQSSAPWKIVFGHHNIYSSGVYGVNQRLVSQLTPLFKHHQVQLYINGHEHHYERTQPINGTTYLTCGAGAKLRPVGQSDWTDYATSQLSFVAYDLYADQMAIRGINQDGKIIDRALISRTT
>NC_019780.1|WP_015229262.1|1601580_1603338_-|ABC-transporter-substrate-binding-protein
MLSQRRNNFLVSLLFSVLISFLTACNPAIIESTASDVPQVVQAILSDPKTFNAILSQESPNVFGFTYEGLVDQNPLTGEIEPALAKSWEISDNKKEITFTLRDNLKWSDGEPLTADDVVFTYNDLILNPKIPNNTRDSLRIGESGAFPTVEKVDGKRVKFTVPEPFAPFLQSTGISILPKHALKESVEQTDSEGTPVFLSKWGVDTPPENIIVNGRYRLASYSTSERVIFEKNPYYWEKDELGNQLPYIDRVVWQIVENQDTALLQFRSGGLDSISVTPEYFSLLKREEDRGNFTIYNGGPQYGTNFIGFNLNTGSRDGKPLVDPIKSRWFNTLEFRKAVAYGINREQMINNIFRGLGEKQNSPISVQSPYYNQEVTSYGYDLEKAKELLLSAGFQYNEEEQLLDSEGNRVRFTLITNAGNKTREAMGAQIKQDLAKLGITVDFTPIQFNVLVDKLSNSLDWECHLLGFTGGNEPHFGINLWRTDGNLHTFNQTARPRNQSLEGRKVREWEKEIESLYIQASRELDESKRKALYAEAQDIVQEHLPYIYLVNPLALAAARDRIQGIEYSALGGTFWNIEELKIQN
>NC_019780.1|WP_015229261.1|1600572_1601346_-|nickel-pincer-cofactor-biosynthesis-protein-LarB
MESQTLKALLNAVATGEISPEIAAEKLKNLDFESIDEFAKVDHHRAIRTGFPEVIWGPGKTPDQIAKIMLKMRDDRANIIMATRIDRPVYQQIKTQIRELKYHPIPRICVLETTPPPPQLGKIGVVTAGTADIPVAEEAALTAQLCGFRVDRLWDVGVAGIHRLLSHRELLNQVNVLVVVAGMEGALPSVVAGMVDCPVIAVPTSIGYGASFEGVAPLLAMLNSCAAGIGVVNIDNGFGAAILAAQILRTAGKINSH
>NC_019780.1|WP_015229260.1|1599935_1600361_-|hypothetical-protein
MGKSTQAHLERTIQKDQPLSVRQQELKKMNYYMGAKLLEVGVNPQSPEILYRWSIKTEGEQQFCTLSAFWGESKAKLLSGEYPLTGEELINCAKPNVNQGLSNVAQLCGYGSDVKGFQSSLKETMEEMGIVSESLGSLIER
>NC_019780.1|WP_015229259.1|1596673_1599751_+|valine--tRNA-ligase
MTETTLPSQYDPKATEAKWQAFWDNQQVFQAHPEQGGKPFCIVIPPPNVTGSLHMGHAFNTALIDVLVRYHRMRGDNTLCLPGTDHASIAVQAIIDKQLREEGLTRFDIGREKFLERALAWKQQSGGSIVNQLKRLGLSADWSRERFTMDEGLSQAVRSAFVKLYEEGLIYRGKYMVNWCPASRSAISDLEVENKEVNGHLWHFRYPLSDGSRAIEVATTRPETMLGDTAVAVNPNDERYQDMIGKTVTLPLMKREIPIIADEYVDSSFGTGCVKITPAHDPNDFAMGERHNLPFITVMNEDGTINENGGEFVGQDRFEARQNVVKRLEEEGCLVKVEDYVSTLPYSDRGKVPIEPLISTQWFVKIDPLAKTALNRLDQENSPYFVPQRWRKVYRDWLVKLKDWCISRQLWWGHQIPAWYVISETNGEITDETPYFVAQNEDEAREKAVQEYGENIQLQQDGDALDTWFSSGLWPFSTMGWPENTADLETYFPNTTLVTGFDIIFFWVARMTMMSGHFMGEMPFRDVYIHGLVRDENGKKMSKSAGNGIDPLLLIQKYGADALRYTLVREVTGAGQDISLQYDREKDESSSVEASRNFANKLWNASRFVFMNLDGKTPQALGTPDLEKLEESDRWILSRFNQTIKTTREQIENYGLGEAAQGLYDFVWGDFCDRYIELVKSRLNDKNQEESRLVAQQTLAYILEGILKLLHPFMPYVTEEIWHTLTELPDQSLALQPYPEVDEIFPKIKTTGEQETLWKQLQKQIDAFPQQLNLSAVTWLGVAVFGFFLINILFAFVLTLEQFPLLPSFLKLIGVSYTGWFIYRYLLTQEKRQNLREIINNTKAELVGDTSISQASIEQQKTLINPELEQEFELIFGAIYTIRNLRAEAGIKPGMKVDVILQSENSQEREILSKGKTYIQDLGKVENLTVTAAVEEDKQQQVIAGVVGTVQVLIPLAGLVDVEVLRNKLEKNLDKIEGEIKSLQGRLSNEKFISKAPEEVVQGAKDALAEAEKQQSILKDRLEKL
>NC_019780.1|WP_015229258.1|1595724_1596648_+|TIGR01777-family-protein
MKIAITGGTGFVGTRLIQKLSNSEHNLVVFTRDKQRGERTFPKKAFPNVEIVEYNPLQAGSWQNEIANSDAIVNLAGAGIADQPWTPERKQEILDSRLETTKYIVEAIKQADTKPQVLVNASAVGYYGTSETATFDETSGVGNDFLASVCQKWEATAKEIENTETRLVILRFGIVLGEGGALGKMLTPFRLFAGGPLGTGEQWFSWIHLDDLVNLIQETINSAAYQGVYNATAPNPVRMSELCETLGEVMQRPSWLPVPEFALKLLLGEAAQAVLEGQNVIPKRTQEQGFTYQYPTLKPALANIVKQ
>NC_019780.1|WP_156800877.1|1608756_1610466_+|alpha/beta-fold-hydrolase
MENAIAAERINIRIGPLERQILVRDLETYGRTGNVPPSLRLLKPLLNSDVQKLLTRKLEFDQEVVDRFVFGTLRSQQIEPLMEQLQTAFPEADLEELMVGLYLAFQRGNGLSLLDFIVAYPEETLTIDGTAVIALGVQLNLSYLQSQLLAPILAQELKVEYNTGFSPTFDPTASGNVAFNERTFIFRDRQRDRKILADFYLPEGQNGSLVVLSHGYAANRRFLIYLARHLASYGFTVVSLEHPGSNIDLLTDQEFTIDPGELLSPQELIDRPQDISFLLDQLDRFNRYYGSLRNQFNTENVTVIGHSLGGYTALALAGGELDLKAVRRFCRDVTPLGRSPADWLQCAGARLPDSTLNLRDRRVKSAIALNPMISHLFGEKGLKKVTIPTMILSSSEDAITPTLTNQLKPFTQLSGDKYLLTALGATHMSVTDRSNLNSVMGKNTLVPELMGKSAEPLRSWIRGVSLAFLKQDSTEAKQYQPFLTPEYAQFISTPELSFRFTREVPARLTPWLQGIDWTRQRLLVRQSAPDRAPKSQFNLNFSRKREIDQYCRGELEEILTINVDRMFPS
>NC_019780.1|WP_015229269.1|1610462_1611164_-|PHP-domain-containing-protein
MPTTYFFPQTTSNLPTQNVETLKAIWRTIDADSCPHIYNFHLHTVHSDGQLQPESVIDQALALKLRGLAITDHHTVKGYEIAHNYLQSHQTSGQSLPQLWTGVEITSLLLNTEVHILGYGFNPHHGAIVPYLQGDAPVKLNAGADRVIAAIHQAGGLVVLAHPERYQKPATELIPEAVALGIDGVETYYAYKNVSPWTPTPHKTATVKALSEQYNLFNTCGTDTHGLNLLKRV
>NC_019780.1|WP_015229270.1|1611286_1612375_+|NAD-dependent-epimerase/dehydratase-family-protein
MTQNILIIGGNGKIGRCVARDISQQTEAKVTITGRKSSPYRDFPFLSLDLNDLATIQKTIYNYDLVVHVAGPFHHRDGRVLNCCLEAGVNYIDVSDHRSFHQQAVNYHQLASKAGITAILHTGVFPGISNLMARKGVEMLDTADSIHLYYLVAGSGGAGLTVMRTTFLGLKSPFSVWINGKWEEKSPYTDQEIVNFPHYGNAGVYWFDVAETYTLPQSFPVNTVVTKFGSLPDFYNHLTWISAHRFPSWILQNSIALEGLSRLSLAMAKVTDFWSGIGIAICAEVKGWKDGKKQTCNLEFYHENTSIAVGIGVGSIAQLLLKQEIKQPGVWSVEQIVNSDLFDKIMTERGLKIKASIAPDSE
>NC_019780.1|WP_041235386.1|1612343_1613027_-|hypothetical-protein
MQSISLNLIAIGIFAMTMFALFAPILNIPVVFPAGITFIIMGLLTFDTLTWNNRGVTLFLDLFSTAEQRERVLHHEAGHFLAAYFLGIPITGYSLTAWEAFRQKQPGKGGVQFDTTALEKGGQKPNQINLMLDRFCTVWCAGMAAEILSYGNAEGGEDDRSQLQAILKELGYPPSQRKQKQEWSTLQAKSLIERNQEAYQTLIKVMRQGASVESCEQIIQNQAQLKP
>NC_019780.1|WP_015229272.1|1613295_1613505_+|hypothetical-protein
MNSFQQIVESVESLPLEDQEILLEFLQKKIQEKRNDQVKQEISEVREEFAKGNVKWGSVDDFLGELEQP
>NC_019780.1|WP_015229273.1|1613501_1613780_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MKIGWTPKSLRSFKRLIRKNPHLIPLLEKTLKQLSENPFHPTLRTHKLKGELEEIWSCSINYQYRILFEFVRNTQEEDAILLLNLGTHDEVY
>NC_019780.1|WP_015229274.1|1614078_1615263_-|NAD(P)H-quinone-oxidoreductase-subunit-H
MAKIETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRWDYAAGMFNEAITVNAPEKLADIEVPKRAQYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFRERELIYDLWEAASGSRLINNNYFRVGGVAVDLPYGWLDKCIDFCDYFAEKVDEYEKLITNNPIFRRRLEGIGVITREEAINWGLSGPMLRGSGVKWDLRKVDHYECYDDFDWEIHWETAGDCFARYLVRVREMRESLKIIRQACAGIPGGPYENLEARRMAEGKKSQWNDFDYQYIAKKMAPTFKIPEGEHYVRLESGKGELGIFLVGNDNVFPWRWKIRAPDFNNLQILPHLLKGMKVADIMAILGSIDVIMGSVDR
>NC_019780.1|WP_015229275.1|1615364_1617068_-|DUF3352-domain-containing-protein
MKFRSFLLTLITASLIFLALFAVSLNWLLQKSPLIYEKGGVVQSPTAAQFVSKQAPIMASLVVDVDRLEAYRQLRAPLQIRSRSRQELDRIKSQFLASRQLDYDRDIKPWLGEEITLAVTALDFDRDRTNGVQPGYLLVTTTDDQELAREFLQAYYSRQAVSPNTDLVFERYKGINITYRRPLQTNPDPNAGALASAVVGDHVLFANHPKVLREAINNIQVPSLSLEQALPYQKAQKTITNPRIGQLYLNLPAVAAWITQQPALPLQDNQPTLTAGVSLTPDGLKTQTALLGIGGEENRDPALTQPINALNYIPSDSVFTAAGVDLNQLWNSWQQLAVDESTTAVSQQLEASLQERLGISIPDQIFPWVKGEYAVALLPTEAEKEGNWVFVAETVAPEATKRAIEQLDEKAKQEGYSVGNLKLGEQQVTAWTVIKPNANHVNFNPKKNPVRLNAEVKGIHGKMENYQVFGTSIEAISQGITKDEDSLINREAFQSAIAQLPPENDGYLYLDWEKSQPLLEQQFPLIRIIELAGKPLFDHLQILTLASEGTETGVRKATVFLQLTSRR
>NC_019780.1|WP_015229276.1|1617647_1618241_+|TerD-family-protein
MGINLQKGQRISLKKEAPSLKKLMCGLGWDVVDRSSGLTSMFKADYDLDASVLCLDQNDKLKGNSNVVYFGNLSHQSGAITHLGDNLTGEGEGDDEQIIVDLPNVPAEISKLVFVVNIYDAVKRKHDFAQVENAFVRLVDVSNNQEIARYTLSGNDYQGKTSMILGEVYRQDDEWKMAAIGNGLELNGLQEVVNHYL
>NC_019780.1|WP_015229277.1|1618664_1619351_-|urease-accessory-protein-UreF
MVQSSQQLALLQLADSFFPSGTYTLSHGLETFVQTGEITSSQELRDMIELALWQKVGASELVALIHTHRASQQGNISAIAQIEQHLWSQTLVATTRDSLLRSGRALLSVATPVWSDSQLEALSSRESPCYGLHPIIFAVVSRAARLEENDATLAYLHGFVTGIMGAAIRLGILGHIQAQQLRLELASTMEQVSEEAAQKQLAQMGSFAPSLDIAQIEQGHLSQRSFAN

Crispr_ID: NC_019780_22

• CRISPR_ID: NC_019780_22
• CRISPR_location: 1652463-1652594
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_22

Consensus_repeat	Method
AGTTAAAACGTAGGTTGGGTGGAGGTGACGAAACCCAACA	CRISPRCasFinder

spacers of NC_019780_22

>22.1|1652503|52|NC_019780|CRISPRCasFinder
GCCAGCAATTGGTCTCTAAAATCCCCCCTAACCCCCCTTTGAAAGGGGGGAA

CRISPR arrays and Neighbor proteins around NC_019780_22

CRISPR arrays

The CRISPR arrays of NC_019780_22

>merge|NC_019780|22|1652463-1652594|CRISPRCasFinder
AGTTAAAACGTAGGTTGGGTGGAGGTGACGAAACCCAACAGCCAGCAATTGGTCTCTAAAATCCCCCCTAACCCCCCTTTGAAAGGGGGGAAAGTTAAAACGTAGGTTGGGTGGAGGTAACGAAACCCAACA

>NC_019780|22|22|1652463-1652594|CRISPRCasFinder
AGTTAAAACGTAGGTTGGGTGGAGGTGACGAAACCCAACA	GCCAGCAATTGGTCTCTAAAATCCCCCCTAACCCCCCTTTGAAAGGGGGGAA
AGTTAAAACGTAGGTTGGGTGGAGGTAACGAAACCCAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229312.1|1652765_1654664_+|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl|CDD|214386
NC_019780.1|WP_015229301.1|1642789_1643245_+|DUF29-domain-containing-protein	unknown	unknown	gnl|CDD|366774
NC_019780.1|WP_015229316.1|1657666_1660276_-|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl|CDD|235444
NC_019780.1|WP_015229313.1|1654657_1655779_-|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl|CDD|235388
NC_019780.1|WP_015229309.1|1648183_1649806_-|gliding-motility-ABC-transporter-auxiliary-protein	unknown	unknown	gnl|CDD|225766
NC_019780.1|WP_015229307.1|1647281_1647506_+|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|224638
NC_019780.1|WP_041235392.1|1651819_1651999_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229302.1|1643383_1644529_+|beta-ketoacyl-ACP-synthase	unknown	unknown	gnl|CDD|235653
NC_019780.1|WP_041235393.1|1662593_1662782_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235394.1|1664568_1664940_+|hypothetical-protein	unknown	unknown	gnl|CDD|372140
NC_019780.1|WP_015229308.1|1647621_1648182_-|DUF4340-domain-containing-protein	unknown	unknown	gnl|CDD|379518
NC_019780.1|WP_015229315.1|1657106_1657406_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|177056
NC_019780.1|WP_015229303.1|1644721_1646095_-|DUF2079-domain-containing-protein	unknown	unknown	gnl|CDD|370724
NC_019780.1|WP_015229319.1|1665763_1666021_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229314.1|1655944_1656796_-|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349893
NC_019780.1|WP_015229318.1|1663537_1664560_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	unknown	unknown	gnl|CDD|226985
NC_019780.1|WP_041235391.1|1650722_1651811_+|glycosyl-transferase	unknown	unknown	gnl|CDD|340861
NC_019780.1|WP_015229306.1|1647066_1647285_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015229304.1|1646135_1646633_-|DUF427-domain-containing-protein	unknown	unknown	gnl|CDD|225220
NC_019780.1|WP_015229317.1|1660295_1662524_+|amino-acid-transporter	unknown	unknown	gnl|CDD|273347

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229312.1|1652765_1654664_+|ATP-dependent-zinc-metalloprotease-FtsH	gnl|CDD|214386	CHL00176, ftsH, cell division protein; Validated.	0
NC_019780.1|WP_015229301.1|1642789_1643245_+|DUF29-domain-containing-protein	gnl|CDD|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	3.05888e-52
NC_019780.1|WP_015229316.1|1657666_1660276_-|DNA-mismatch-repair-protein-MutS	gnl|CDD|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NC_019780.1|WP_015229313.1|1654657_1655779_-|quinone-dependent-dihydroorotate-dehydrogenase	gnl|CDD|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	1.35854e-179
NC_019780.1|WP_015229309.1|1648183_1649806_-|gliding-motility-ABC-transporter-auxiliary-protein	gnl|CDD|225766	COG3225, GldG, ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility and secretion].	7.59938e-68
NC_019780.1|WP_015229307.1|1647281_1647506_+|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|224638	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family [General function prediction only].	3.25448e-25
NC_019780.1|WP_015229302.1|1643383_1644529_+|beta-ketoacyl-ACP-synthase	gnl|CDD|235653	PRK05952, PRK05952, beta-ketoacyl-ACP synthase.	0
NC_019780.1|WP_041235394.1|1664568_1664940_+|hypothetical-protein	gnl|CDD|372140	pfam12483, GIDE, E3 Ubiquitin ligase. This domain family is found in bacteria, archaea and eukaryotes, and is typically between 150 and 163 amino acids in length. There is a single completely conserved residue E that may be functionally important. GIDE is an E3 ubiquitin ligase which is involved in inducing apoptosis.	3.09037e-16
NC_019780.1|WP_015229308.1|1647621_1648182_-|DUF4340-domain-containing-protein	gnl|CDD|379518	pfam14238, DUF4340, Domain of unknown function (DUF4340). This domain is found in bacteria, and is typically between 183 and 196 amino acids in length.	3.50523e-06
NC_019780.1|WP_015229315.1|1657106_1657406_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|177056	CHL00134, petF, ferredoxin; Validated.	6.56998e-58
NC_019780.1|WP_015229303.1|1644721_1646095_-|DUF2079-domain-containing-protein	gnl|CDD|370724	pfam09852, DUF2079, Predicted membrane protein (DUF2079). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.5979e-101
NC_019780.1|WP_015229314.1|1655944_1656796_-|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|349893	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions.	1.74513e-95
NC_019780.1|WP_015229318.1|1663537_1664560_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha	gnl|CDD|226985	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only].	4.98369e-65
NC_019780.1|WP_041235391.1|1650722_1651811_+|glycosyl-transferase	gnl|CDD|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00104239
NC_019780.1|WP_015229306.1|1647066_1647285_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	8.61331e-11
NC_019780.1|WP_015229304.1|1646135_1646633_-|DUF427-domain-containing-protein	gnl|CDD|225220	COG2343, COG2343, Uncharacterized protein conserved in bacteria [Function unknown].	2.01529e-52
NC_019780.1|WP_015229317.1|1660295_1662524_+|amino-acid-transporter	gnl|CDD|273347	TIGR00930, Solute_carrier_family_12_member_1, K-Cl cotransporter. [Transport and binding proteins, Other].	5.80796e-141

Protein sequences

>NC_019780.1|WP_041235392.1|1651819_1651999_+|hypothetical-protein
MSNSTTVSEQLPNIVNLVETYNVNKQRLDDKSKSLTYVAYSTFAIVVLIIFHIFSIYYR
>NC_019780.1|WP_041235391.1|1650722_1651811_+|glycosyl-transferase
MSRPVLYVAITSHGFGHAVRAASVAAAVQELLPDLLPILVTKVPRWLLQSYLSGEFIQRDRALDVGVIQSDSLQMDLDATRLELEKIRANEDKIIAEEAEFIKNQGVGLIIADIPALAGKIAQKAGVPCWSISNFGWDFIYRHWGEEFQTLAQWITEGYRSSDRTFRLPMHEPMNEFPNCVDVGLTGGVPKWTAEEIREQFNLKTAKEQTILLSFGGLGLHKIPYQNLQYFPDWQFISFDRKAPDVPNLLKVTDHNYRPLDFMSVCGRVVSKPGYSTFSEALRVGVPIVSLRRERFAESALLLEGIENYSPHQILSQSSFFEGNWDFLRQLPDPPRSSEKPEKDGTEKIASTIVDHFSRLKS
>NC_019780.1|WP_015229309.1|1648183_1649806_-|gliding-motility-ABC-transporter-auxiliary-protein
MGKYLSLFGFAIVIVGIVAGYVANEWIPIPLGIIVGGGVIFIGGLLFATRGFWQQRSTGMGINALVATIALITIIGLLNFLGVRYGKTIDLTENNLYTLAPQSKQLVENLEKPLTVWVFQSPPSSENERLLKNYQKYSENFKFKFVDPQTNIGKVQEFGVESYGEVYLEYGTKNQFVQQANEVEPISEVRLTSAIKNIQRDRVSFVYFLQGHGEPSLEETQGGFSQAVASLQQQGYQVQPFNFAEENSLPRLADTVLVIASPQQELFPGEIEAIENYLAEGGSLLLLLDPESNPGLESVLDTWGINLDNRVIVDASGQGQVLGFNIATALVTRYGDHPITNPFSNGITVYPLARPVDVVEKEGVEATPLAYTNEASWAESDTTTEQVQYNPERDRAGPLVLGFALNQVEISTKSTQKNNPNETDSTSEETTPEEKSGEENETKPETSPQPNVDSRVVIFGDSDFARNGLFIQQLNGDMFLNSIDWLANVEETSLALRPKEETNRRINLTPEQAAILSRTAIGIVPLFGLILAIISWLRRR
>NC_019780.1|WP_015229308.1|1647621_1648182_-|DUF4340-domain-containing-protein
MKKTTLFLVLIALGLGGYVYWYEIKPQSQEETVTDSQQGLFSFEEDQVQKITIEREGKETLKFIRLETAASSWRMKQPEGTPVADSSIVFLLNLLIRDDSNKTFTVQTNQLEQYGLKNPSASISIELKDQTKHKIILGNPTFDEQGIYGQINPEEEEETKVYILPIDFKSVVERPLSEWKLTAAKT
>NC_019780.1|WP_015229307.1|1647281_1647506_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MSNIPSLKPQEVVRILENIGFVEVRQKGSHKQFRHEDGRRTTVPFHKGRDISPRLLRQIGNDIGLTVEEMLEWR
>NC_019780.1|WP_015229306.1|1647066_1647285_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MRTFTAIIERDFDTNLYVGYVPGFSGAHSQGETLEELQENLCEVIEMLLEDESVAFETAFVGTQQIVVQTHS
>NC_019780.1|WP_015229304.1|1646135_1646633_-|DUF427-domain-containing-protein
MFNRQRIEPKPGQESVWDYPRPPRLETSTKHIQVVFNGEIIADTKKPLRMLETSHPPVYYIPAEDVKQEYLTQTNHQTFCEWKGKARYFTLKVGDKEAINAVWDYPNPSSRYPDITNHFAFYPAKMDGCYVDGEKTQSQEGDFYGGWITSDIVGPFKGAPGTWGW
>NC_019780.1|WP_015229303.1|1644721_1646095_-|DUF2079-domain-containing-protein
MKHFRLSFLIIGSALALFFFSSLRHFLIRSSGWDLAIFDQAVYLISEGKTPISSILGFHILGDHAAPIFYPIALLYKIYADVHWLFLLQSIALSIGAIPVYHLSLKSGLNNKLAKTLAILYLLYPLIFNINLFDFHPDVIALPAILFAILAAYQAKMIWFTVAILIILACKAVFSLTVTAMGIWLLLFKKKRAYGIIAITFGSAWFILSTQIIIPTFRGYEHSAVSRYGYLGDSILEIAKNLFLKPNLVFSHLFTLANLEYLVLLFSPVVWGLSFRYLSPLVAASPALLLNLLTDYPLQKDLLHQYSLPILPFLFLAVIESLAAGKGWLKQPRWMIVWGMIAFIALAKFGFFWTKYLTEIDTWKATREAINIVETKGNVLTNNQIAPQLSQREVIQLVGEKPAEINLDQFDYILLNLRYPGLISSQATVEILNDRIAKSNDFELMFDRTDVKLWTQN
>NC_019780.1|WP_015229302.1|1643383_1644529_+|beta-ketoacyl-ACP-synthase
MTHDQKQTVVITGISCLTGGGNLTQSWQNLLQEKSNISLQQPFFSFPPVPLSLIGEKPSSLATLTTEIVNDAIADASLLPPLANCGVVVGSSRGCQGQIEQWAQQKDQSVNWLDILPNQAAVTAAKIVGSRGIVLSPMAACSTGICSIAQGYDLIQGRQCEQVIAGAVETPITPLTLAGFEKMGAMAKTGCYPFDQQREGLVLGEGGAIFVLESLKAATARNAFIYGEILGYGLTCDAYHVSAPDPNFRCGRLAVKQCLKKSRLCAADVNYIHAHSTSTKLNDEREAQLIQSLFPFSVAVSSTKGVTGHTLGASSAIGVAFALMSLREQILPPCVGLKQSAFNLNLVRKATSHQINYALVLSFGFGGQNSAMIVGRLDHKM
>NC_019780.1|WP_015229301.1|1642789_1643245_+|DUF29-domain-containing-protein
MANDITNQLKTLYEVDNYLWLQETINLLKNQNWQGLDIENLIEELESLARRDLNKARSLLRQIIIHLLFLQFWTEEYERNYRHWQGEVTAFQADLNDHLTTTLKNKLNQELESIYQTALKIVLQKTGLSANQLPENCPYSLEKLLDISNDK
>NC_019780.1|WP_015229312.1|1652765_1654664_+|ATP-dependent-zinc-metalloprotease-FtsH
MNNRPSSQSHPVSRYLLPLATGWMVLQSVFLPTPSLAQTQNESDKLSYSKFLQKIEQGEVQKVELDPRTDIATVTVINEQGETVTRDVQLLDQDNELIVRLRQNEIPLDVQSSENSAETVGIIANGVLILLLVGGLAIIIRRSAKASGQAMSFGKSRARYQVETDTGVKFDDVAGIDEAKEELQEVVTFLKETERFTSVGAKIPKGVLLIGSPGTGKTLLAKAVSGEAGVPFYSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRKRGAGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRPDVLDPALMRPGRFDRQVSVDLPSYNGRLGILRVHARNKKLAPEVSIESIARKTPGLSGADLANLLNEAAILTARRFKPMITDLEIDDALDRITIGLSLNPLLDSKKKRLIAYHEVGHALLMTLLEHSDPLNKVTIIPRSGGVGGFAQQSFNEDMVDSGLYTRAWIIDRITITLGGRAAEKEIFGDAEVTAGASNDLKVVSNLAREMVTRYGMSDLGPFALESQNDEVFLGRGDANHHNQYSQEVATKIDDQVRAIALRCYEKARRIIRENRALMDHLVDIILYEETIEGEEFRKIVSQYTELPKKQLVPSGNQ
>NC_019780.1|WP_015229313.1|1654657_1655779_-|quinone-dependent-dihydroorotate-dehydrogenase
MYKNVIRPLLFSGLKADPEWLHDKSLNFLEWLEEHQDQLLAKSILDTVSQQCCYEEKRLTQTLWGITFPNPLGLAAGFDKNGVAASIWDQFGFGYAELGTVTEHPQLGNPPPRLFRLLADEAALNRMGFNNQGSETLAQSLQKQSQKPRKTPWGVNLGKSKITPLEDAANDYLTSFLRLREWGDYFVINVSSPNTPGLRSLQDSAQLSLILEAIQSNNPQRKPILVKIAPDLTWEAIEQVLVIANQYQLAGIIATNTTIEKQSLKTRTINGYPITEEAGGISGKPLRDRATAIIRFIYQQTEGKLPIIGVGGIFTAADAWEKITAGATLLQVYTGWIYEGPMMARNVLTGLTEKLEEQGLSHLSEAVGLTVNY
>NC_019780.1|WP_015229314.1|1655944_1656796_-|M20/M25/M40-family-metallo-hydrolase
MNLKARLKGHLEQIVRDRHPYFSSGGHFYVQQYLCEQFQQWGKLETHEFSFNGETHKNYIFNLSADRATDHPPIILAAHYDGVPGTAGADDNATGVAVLLELIREFVDNPLPIPLRFIAFDLEEYGMIGSEIYAEELKEKREKVSLMFSLEMLGYCSQEPNSQVYPPLIENFYPNTGNFIAFVGNLGTTKEARFFAGEMRKSGTPSEWLSVPLSGNLLPETRLSDHSPFWDQGYKAMMVTDTSFLRNPNYHQPSDSIETLDLDFLTGVCEGLIAGLRVFANQE
>NC_019780.1|WP_015229315.1|1657106_1657406_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MASYKVTLVNEEMGLNQTIEVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKMKEGEVDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEELY
>NC_019780.1|WP_015229316.1|1657666_1660276_-|DNA-mismatch-repair-protein-MutS
MNEQLSFYMKNADYTQIDRAQLTPMMQHYIEVKEQYPNALLLYRVGDFFECFFQDAVTVAQELELVLTSKESGKEIGRVPMTGVPHHALDRYTALLVEKGFAIAVCDQVEDASVAAAQKRMVERKITKLLTPGTLTEEGMLHARRNNFLTSIVIAGNHWGLAYTDISTGEFYTTQSQNLESLALELLRLHPAEILLPTNAPDLGSMLRPGEKSDSIPDFLPENFCYTLRSQTQFSAGEARNQLLEYFRVRSLEGMGCSNLPLGVRAAGGLLFYIEETQKAHQVPLQTLRTYTLNDYLILDPQTRRNLEIIQTVRDGTYHGSLLWALDRTCTAMGGRALRRWLLQPLLEIKGITARQDTIAELIQETNLRDELRQLLRQIYDLERLSGRAGAGTANARDLKGLAISLVRLQELATLAQKGNSPFLRALQSVPSDLEALGKKILDAIVESPPQHLGEGGLIRSGMDEQLDQMRETFEKDKQWLAHLETSERERTGISKLKVGYNKTFGYYLSIPRSKADLAPENYTRKQTLTNEERYITSELKERETRILTAKDDLNRLEYEIFADLRAEVGEKAQQIRDISRAVAAIDALAGLAELAVYNDYCRPEMVEGRCLSIKEGRHPVVEQTLPTGFFVPNSTNMGYEEERDTPDLIILTGPNASGKSCYLRQVGLIQLMAQIGSFVPAQAAKLGISDRVFTRVGAVDDLATGQSTFMVEMNETANILNHATSHSLILLDEIGRGTATFDGLSIAWAVAEYLATEIKARTIFATHYHELNELASILPNVANYQVTVKEMEQEIIFLHQVQPGGADRSYGIEAGRLAGLPPSVISRAQQVMGQIEKHSKIALGLRKGIIKEMKDNESLIDQLDIFET
>NC_019780.1|WP_015229317.1|1660295_1662524_+|amino-acid-transporter
MVKLPSPSKDDINVPTPEAKKIGTFGGVYTPSILTILGVIMYLRFGWVVGNVGLLGTLIIVTLSTAITFLTSLSISAIATDRVVGGGGAYYMISRSLGIESGGAVGIPLYFAQALSVALYTIGFAESVVNVFPQLNQLYVALIVTVFVAVIALTSADVAIKVQYVIMGAIALSLLSFFFGKSLEPTEIEMWGASDRLSEPFWQVFAVFFPAVTGIMAGVNMSGDLKNPTKSIPLGTLAAVGTGYVIYMILPMVMAMRADATTLLAEPLIMKEIALWSPAIFLGVWGATLSSALGSILGAPRILQALARDRVLPLWMRFLGKGSGVNDEPRVGTAVTLVIVIATVYVGDLNLIAPVLTMFFLTTYLVLNISAGIEAFLQSPSFRPQFKVHWSFSLLGAIGCLAVMFLINAVATVIAAIISLSIYFWLQRRALEVTWGDVRRGVWMALLRIGIYKLDQSYREEDAKNWRPHILVLSGAPTKRWSLIELADALTHKRGLITVATVLKSKSRELIKQGDSEKRIRNYLEKKGIQALVRIVTATDIFAGAEHLVETYGLGSIVPNTILLGDSESIDRRDSYCQMIGQIHQSKRNLVIFRENHDRGFGKRRRIDVWWGGSMQANGGLMLLLAYLLRSDLRWREANIYLKLVVNHQKAVPPARDNLNRLLSNLRISAHPQVIVADGRSFDRILQQTSRNADIIFLGMAAPDQNFTQYYEALQKKVAELPSTVFVLAAPNFSFSEVFNDQ
>NC_019780.1|WP_041235393.1|1662593_1662782_+|hypothetical-protein
MLSGAVSKIGNTSHYLEILYQETRSSAIPEKKIRPFLVSLDLLFVICYLLFGIGEKGIVEWE
>NC_019780.1|WP_015229318.1|1663537_1664560_-|aromatic-ring-hydroxylating-dioxygenase-subunit-alpha
MYSVREIGINPNHWYVVARSCEVTTQPHAVTLWKESIVLYRQNDGKICALEDRCPHRFVKLSAGEVQGNYLECAYHGWQFDDQGKCISIPYLTEKQKLPRCQLRRYPVQEADGFIWVFLGEENQNIPRFQIPEWDHLNYIATVSVIETQAHYSYLIENLMDMYHGHLHQDWQAWTDAKLENIKETDQEVHGYYQAQSYYKIDKIWSISQLFFPSLRQLHPEPLTVSYLYPHWVSSLGSDFKIYCLFCPINETSTRAYLIHFTSLNAFWRLHKLPIWFRRGLKNMLFGSAQKLLDGLVHQDVVMMEQEQQAFLENPQQKGYEFNPVLGSVQRLIRKQVELS
>NC_019780.1|WP_041235394.1|1664568_1664940_+|hypothetical-protein
MIFSRDIFSQGIKHFQYNLIAKVKIEFSPRNDAEYQTLGYEFQEVILPVNIQVYIIGEASDRAGDLELDQPSEENQLFLISYKSEEELSEEKRGDIKKNKKIAQICFFSVIAFIVFALINLLN
>NC_019780.1|WP_015229319.1|1665763_1666021_-|hypothetical-protein
MWEVWRDQVLGEKRNCYSWFNLLWFPPQWLRRIDRDMFISAIDYRIQLLRLEMEQVLQWGVTTTSRDHAMWNIINHNCLGKMARS

Crispr_ID: NC_019780_23

• CRISPR_ID: NC_019780_23
• CRISPR_location: 1721914-1721991
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_23

Consensus_repeat	Method
CTTGCCTCTTGCCTAAGGCAACTTGCCT	CRISPRCasFinder

spacers of NC_019780_23

>23.1|1721942|22|NC_019780|CRISPRCasFinder
TTTGCATGCAAGCCTTTTGCCT

CRISPR arrays and Neighbor proteins around NC_019780_23

CRISPR arrays

The CRISPR arrays of NC_019780_23

>merge|NC_019780|23|1721914-1721991|CRISPRCasFinder
CTTGCCTCTTGCCTAAGGCAACTTGCCTTTTGCATGCAAGCCTTTTGCCTCTTGCCTCTTGCCTTTTGCCTCTTGCCT

>NC_019780|23|23|1721914-1721991|CRISPRCasFinder
CTTGCCTCTTGCCTAAGGCAACTTGCCT	TTTGCATGCAAGCCTTTTGCCT
CTTGCCTCTTGCCTTTTGCCTCTTGCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229352.1|1701920_1704092_+|polyphosphate-kinase-1	unknown	unknown	gnl|CDD|235469
NC_019780.1|WP_015229364.1|1729028_1730741_+|hypothetical-protein	unknown	unknown	gnl|CDD|227621
NC_019780.1|WP_156800723.1|1705353_1707699_-|metallophosphoesterase	unknown	unknown	gnl|CDD|225483
NC_019780.1|WP_156800727.1|1723481_1723652_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229360.1|1722088_1723168_+|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl|CDD|234832
NC_019780.1|WP_083874479.1|1730762_1730993_-|hypothetical-protein	unknown	unknown	gnl|CDD|340399
NC_019780.1|WP_015229362.1|1726566_1727544_+|protein-methionine-sulfoxide-reductase-catalytic-subunit-MsrP	unknown	unknown	gnl|CDD|235431
NC_019780.1|WP_015229351.1|1701374_1701830_+|NUDIX-hydrolase	unknown	unknown	gnl|CDD|223979
NC_019780.1|WP_015229359.1|1718282_1721636_+|alkaline-phosphatase	unknown	unknown	gnl|CDD|224699
NC_019780.1|WP_015229356.1|1708037_1714055_+|DNRLRE-domain-containing-protein	unknown	unknown	gnl|CDD|224699
NC_019780.1|WP_015229363.1|1727562_1728867_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_019780.1|WP_015229350.1|1699578_1700961_+|argininosuccinate-lyase	unknown	unknown	gnl|CDD|179143
NC_019780.1|WP_015229358.1|1714556_1717289_-|calcium-binding-protein	unknown	unknown	gnl|CDD|380205
NC_019780.1|WP_015229353.1|1704308_1704698_+|YraN-family-protein	unknown	unknown	gnl|CDD|376717
NC_019780.1|WP_156800731.1|1732580_1732775_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800725.1|1714228_1714471_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235397.1|1704739_1705246_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl|CDD|238451
NC_019780.1|WP_156800729.1|1732330_1732516_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229365.1|1731028_1732090_-|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl|CDD|224013
NC_019780.1|WP_015229361.1|1723806_1726437_+|type-I-DNA-topoisomerase	unknown	unknown	gnl|CDD|236048

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229352.1|1701920_1704092_+|polyphosphate-kinase-1	gnl|CDD|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NC_019780.1|WP_015229364.1|1729028_1730741_+|hypothetical-protein	gnl|CDD|227621	COG5305, COG5305, Predicted membrane protein [Function unknown].	2.58884e-30
NC_019780.1|WP_156800723.1|1705353_1707699_-|metallophosphoesterase	gnl|CDD|225483	COG2931, COG2931, RTX toxins and related Ca2+-binding proteins [Secondary metabolites biosynthesis, transport, and catabolism].	1.33501e-07
NC_019780.1|WP_015229360.1|1722088_1723168_+|3-isopropylmalate-dehydrogenase	gnl|CDD|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NC_019780.1|WP_083874479.1|1730762_1730993_-|hypothetical-protein	gnl|CDD|340399	cd16922, HATPase_EvgS-ArcB-TorS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC. This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.	4.19073e-18
NC_019780.1|WP_015229362.1|1726566_1727544_+|protein-methionine-sulfoxide-reductase-catalytic-subunit-MsrP	gnl|CDD|235431	PRK05363, PRK05363, protein-methionine-sulfoxide reductase catalytic subunit MsrP.	2.07889e-157
NC_019780.1|WP_015229351.1|1701374_1701830_+|NUDIX-hydrolase	gnl|CDD|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	3.69004e-28
NC_019780.1|WP_015229359.1|1718282_1721636_+|alkaline-phosphatase	gnl|CDD|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	2.03756e-40
NC_019780.1|WP_015229356.1|1708037_1714055_+|DNRLRE-domain-containing-protein	gnl|CDD|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	4.40259e-37
NC_019780.1|WP_015229363.1|1727562_1728867_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.10869e-52
NC_019780.1|WP_015229350.1|1699578_1700961_+|argininosuccinate-lyase	gnl|CDD|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NC_019780.1|WP_015229358.1|1714556_1717289_-|calcium-binding-protein	gnl|CDD|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	7.92046e-09
NC_019780.1|WP_015229353.1|1704308_1704698_+|YraN-family-protein	gnl|CDD|376717	pfam02021, UPF0102, Uncharacterized protein family UPF0102. The function of this family is unknown.	6.08839e-41
NC_019780.1|WP_041235397.1|1704739_1705246_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl|CDD|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	6.86455e-66
NC_019780.1|WP_015229365.1|1731028_1732090_-|dTDP-glucose-4,6-dehydratase	gnl|CDD|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NC_019780.1|WP_015229361.1|1723806_1726437_+|type-I-DNA-topoisomerase	gnl|CDD|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0

Protein sequences

>NC_019780.1|WP_015229359.1|1718282_1721636_+|alkaline-phosphatase
MAGNNVIFIHPDGAGPSHWSLARLATEGPDGRINWDRMTEASVYLGHLDDQIGATSNAGAVAHAYGIKPVAPSYGFDGDGNPYQPLSELQGQLQDGAESGDTIMEEAVASGKPTALIQSGFIAEPGTGVFVADAESRGDREGITAQIVESGVDVILGAGEVDYLPEGETGFFGVEGTRTDGRNLITEAEDAGYEVVYTREQLQSLPADTERVLGIFAPEDTYNDLTEQQLRDAGLVDESLPPSEQLITYGQPDQNNPDPVTVGEMMEFTLGLDKFTQAEDGFFVVAEEEATDNFGNDNNTAGVLDATLRADAMIGAAQDFVDNVNPNTLVITAADSAAGGLQLDDKTGETVGTNFRQPSFDDLEGNVQIGERNGQPVFAYEVPLDGQTGNNTEPFVTGAPDASGDTFEFGAAYATFSDVFGSIVTKTYGLNAEKINSTIDNTAVYRLMYETLFDVELAPPDGVPDDFDIEQPPEATASTGNVIFFHPDGTSPSHFAAARFATVGTDGRLNWDNMSEASVYLGHMDDRIVGTSNGGAVVHAMGVKPFAGSYGLDENGNPYTSLSGKEGTTILEEAQATGKAVGIVNSGFIAEPGSGVFLADVEDRSQTEAITVEILESGADVILGGGETDYLPEGTVGVFGQEGTREDGRNLIEEAEDMGYTVVFSRDELNEAVENPETDKLLGIFAARDTYNDTFEDDLRGQGFEAENGDLIYYGQPPENPNPPTVAEMTEAALSILSQDEDGFMLVAEEEATDNFPNNGNAGGGIEATIRADEAIGVAQEFVKNQDPNTLLLTAADSDANGFEVEDVDVEAETVGFDDVQADEFVFPLDGQTGSDTAPFQTGAPDADGDNFQFGMVSAGLADLEGSIVAKAFGMNAETLPTTADNTDIYRTMYRTLFGAEAEDVADVKLAFGSLGNDTRDSAVDADFDGAADLSFTGAGSDVIDTSSSIFGQNRVYAGSDNDELLASSNDRLFAGAGNDVLDSTDGNGGNRLYGGAGNDDFFLGSNDRAIGGEGSDRFFTPEGGNNLITGGAGADQFWIANAQLPAAASEITDFTAGEDVLGIGGIDSVAEFADLTITQDGADALISAGDSELARLLGLNADDVTAAQFAIVESAV
>NC_019780.1|WP_015229358.1|1714556_1717289_-|calcium-binding-protein
MVSIGETTALIPQAGSSTQPEHLQDGESGDTDFPYGDFKALGTVGEEDAENGHVLTGYPDGQAAWLQDEDTVRVAYQSESYATMSNETYPWEMESGVTFTGSHIHAIDYNRAAFAEFLENDTPASEMVEGAGHLFNTVYNVFGEIVDGENDDPSDLSAKWGNQTAADGTVYEFREEQQLTQGDFFFHSFCGAYYEPANKYGDGIGFEDDMWLMAEEWNIGNGMYPDPDGEEGPRSAGEFFVNDTMGLASMVVDLENDTAYTAPALGQAGYEKLLPINSGSEDYVVIVAAGYNLGVEPAPLAVYIGKKGVDANGDPLTEGASERDSFLGENGLLYGQLYGMSLDGETFENLGIENVDADVKMMDAYAQDADAPDSFSARYYPTSYQWDGFDSPENAGETEVFKWLEDGDDGEPNEQPEGGVAAGGYNYFNGDSKTEHPAVDPDPSNHRYVQNLTVPGAQLGIEFTDIVNELENNDADGNGLPDYLSADVTRILAGVDGALTLETGGKGAGHIGENNPDGTRTHATHIENDEARIFGPDGLQWVKAADGDYLIVDEDSGNDYGERKYVLPIDSETMQLEEEGTGYFLASAGGALNPRAEAEVAAIPDTFSSAESSEFSGSWNVTHLVETKEDGSFYTQEELAGTGAQEIIDDLPLAEQTLIGVVQHRGESGGVVEERLGDQGGQIFQFNINLDAQAETLAGPAFGSLQDDTLEAGVDFDGEGNLVFSGEGNDSIETSTGNGGNRLYGGSNNDELVAGSNDRAFGGAGDDIIESSLGRENRLYGGAGNDTVNAGYEDRIMGGDGNDRLFLSEGQVEGGGKNLVTGGAGADQFWIANAQVAANANEITDFIFGEDVLGIGGIDSVAEFADLSLTQDGADAIVSVGDNDVARLLGVNADELTADNFAIQATTEVA
>NC_019780.1|WP_156800725.1|1714228_1714471_-|hypothetical-protein
MLKKLGKIGEMGEMGGDGEDGEDGGDGGRWGRWGRWGRWERWGRKIAPLSPLSPLSSLSPLSPLHFFEGLRALKPHIKFG
>NC_019780.1|WP_015229356.1|1708037_1714055_+|DNRLRE-domain-containing-protein
MAGNNVIFIHPDGADPSHWSLARLATEGPDGRINWDEMTEASVYLGHIDDRIVATSNAGAVAHAYGIKPFSGSYGFDENADPYQSLSELQGQLQGGAGSGSTIMEEAIAADKPTAVIQSGFIAEPGTGVFLADAESRGDRAGITAQIVESGVDVILGAGEVDYLPVGTEGFFGVEGTRTDGRNLITEAEALGYEVVYTREQLQALPADTDRVLGIFAAEDTYNDTTEAALVEQGLVDEDGQLITYGQPGNENPVTIAEMMEATLSLDKFTQAEDGFLIVAEEEGTDNFGNNNNAAGVLDGILRADAAIGVAQDFVDNNPNTLLITAADSAAGGIEIDDDGGSAGSTREDGPFGNDGDPFFTGAEDANGDIFSFTAEWGTLSDVAGSIVTKAYGLNSEQLSSTVDNTGIYRIMYETLFEVELDSPAGVPDDFALEAPPEPTQDTGNVVFIHPDGTSPSHYAAARFASEGTDGRLNWDQMTNAGVYLGHMEDQIVGTSNGGAVVHAYGVKPFSGTFGLDEQGEAITSLSGKEGTTILEEAQAAGKAVGIVNSGEIAEPGSAVFLSTAESRGQTGFITAEVLASGAEVILGGGETDYLPQEEIGFFGQPGTRSDGRNLIEEAEDMGYTVVYTLEELQAIDPAETDKLLGIFAAGSTYNATSEENLINQGLVDENGDLIFYGQPPENPDPPTLAEMTEAAVGILSQDPDGFMLVAEEEGTDNFNNSGNSAGGIEAALRADAAMGVVQDFIRNQDPNTLLITAADSDAGGVEVDDVSGDTVGTYEVQPELPGTGVEFPFDGQTGSDTAPFTTPADADGDEFQFGVVNSFSDLSGGIVSKAFGMNADTLPPTTDNTDIYRTMYRTLFGIEPEAAAGVQPQENPTATFTTAIDNNILENEPDTPGGDVVDISVDQEDDGGITQALLEFTDFSIPDDATLEGATLRIFTNNPTSGPVSAYRMLEDWGNDSTWADFDGNGVQPDGVEAVEEASVTFFNPDDNAFVNLDVTEDIQFWLDNPDQNNGWILINDSTDGWDFDSSESQSQLVPQLVLEFTTEDAPPAPVEGVVITVTSADDSGAGSLRDAIAQANDSEGTIDTIEFDSNLNGETIVLTSGELAITDPLIITGLGDDQLTIDGNDNSGIFNVNDGTDNTIEVSIDGLTLTGGNTEGSGAAISNRETLTISDLTISDNFAEVNGGAINNTGGTLTITDVTLSGNTASLDGGAINNINEGTVTISESNISGNTAIDDGGAIDNANGSTLTVTNSIISDNVADTGFGGGVNHSYNSLATLVNTTISGNSASANGGGVSNYNGTIVVSDSTISGNSAATDGGGIENFGTATLINSTISNNFSARDGGGIFDTGTASLISSTVSENEAGNNGGSLWSDGTVNLTNSILADSRSADDAEVADAGATFNLSGANIVEDGSVSDTIALDPRLSPLQDNGGSVLTHLPLEESPAIDAGDNNELPADSFDLDGDDDTSEPIPFDQRGFDRVVDGVDIGAVEVRTEDLAGPNDPPTILNAVESVGFPESSLTGETEVVAGGQIEATDPDTPAIDLNFELTEDAGGFFELVDATTGAIAITPEGAENIEEGQEFNLELVVSDGEFESDPVNITVNIVEPLLTASETFTAANDNNIREDQPNSPGGDETDISVDQQDPDETQALIEFTDFSIPEGTTLDSATVTFFTNSASDGPISLYRMLQDWNNDSTWADFGGDGVQADGVEAVEEASATFLNPVDDSFLSLDVTEDVQSWLENPDQNNGWVILNASGDGWDFDSSESSLDQVPQLTLEFSAEEAEEAEETEALVFGSLNNDSFDGELGENNFDALADLLFTGAGEDTVDTSSGSGNRIYAGSEADELFAGTGDRLFAGAGNDILEATASNGNNRLYGGFGDDDFINGNNDRLVGGEGSDQFFLAEESGESVITGGTGTDQFWMANAGFPVAANTITDFTAGEDVLGVAGIGAGDITDLSIAQSGNNATIGFNGNDLAILLGVDSNALTNNNFVFENAAV
>NC_019780.1|WP_156800723.1|1705353_1707699_-|metallophosphoesterase
MMSFRVNPYLQQPSSEGMHFTWFTEEDTSGEITITGPGLDNPLSFNTDPTFESVLSYTNAELNQEIDGLEQGSWLLGDENYKHTVDVSGLLPDRTYQYTVTVGDEVFEASFQTAPTQDNWDQIRFFALSDSETEPRGRVRRRDWQQGALDSESEDRPALEGSQWADTLGVSGDRLNYPLTENVGYRNNLEIINSREPDFMMMPGDLVQGGGYQPGWDEFFRHNAGEFDSGLSEYPILPALGNWENYGALNGGYGTDDEGRFGPKFGHDKFHAYFDAPPNGTPEHQDNYYRIDYGPITVLTLDTSNGEPDDSRDNYGGEGQPPKISGREFTEPGTDTQQNYTREQYEAAGGTDLADFNPGSPQWNWAIEQLEDAREQGQIIFAQFHHVPYSSGTHGLPMNHEDSSGQGGTPMRQYHPLFEEYEVAAVFSGHSEMFERSFVDEDGDGIGVTYYDVGVAGDGMRGERTDEEGNLLSYNQFSQWTADQSEPELWEEVNGVLQNVAGGKHYGHLEVNLQQTDEGAEITLTPVYSFPTLDSDYNLVDTERRVYGDEITLQTNADGTLQGAISGSGSPAFGSLQDDTLEAGVDFDGEGNLVFSGEGNDSIETSTGNGGNRLYGGSNNDELVAGSNDRAFGGAGNDIIESSLGRENRLYGGAGNDTVNAGYEDRIMGGDGDDRLFLSEGQVEGGGKNLVTGGAGADQFWIANAQIAANANEITDFIFGEDVLGIGGIDSVAEFADLSLTQDGADAIVSVGDNDVARLLGVNADELTADNFAIQATTEVA
>NC_019780.1|WP_041235397.1|1704739_1705246_+|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MSSQPHPDRALISINCAIVTISDTRSKESDRSGQLIQEKLEANGHQIQDYTILKDDPEAIINHLKTLRKQKTLEVIICNGGTGIAPRDTTYDALAQVLDKTLPGFGELFRYLSYQEIGSRAIASRAIAGVYSNQLIFSLPGSTKAVQLGLEKLILPELVHLVKQLDHQ
>NC_019780.1|WP_015229353.1|1704308_1704698_+|YraN-family-protein
MVSSNLGQLGEEFTAQWLKRQGWEIIASRWRCRWGELDLVAYHSGLIFVEVKTRQSNNWDENGLLAITPQKQAKLYRAAEMFLSHYPAYSHVNCRFDLALVKAQKVSNFDRGENSYELTLVSYLKGIFE
>NC_019780.1|WP_015229352.1|1701920_1704092_+|polyphosphate-kinase-1
MAKSKSETPTINFKDPEYYFNRELSWLEFNQRVLNEAVDPRTPLLERLKFMAIFSSNLDEFFMVRVAGLKQQVEANVNKLTADGRDPSQQLTDISERLRPMILKQDQHFEEVLRGLLAEEGIHLLNYADLNVEQRTYLQNYYEDHVFPVLTPLAVDPGHPFPYISNLSLNLAVVVRQPETDDELFARIKVPKVLPRFVQLPRELGVHNKKGKPAIWTGIPLEQIISHHLEALFPGMTIQECYPFRITRNADIAVEEDEADDLLLAIQKELRKRRMGGSVVRMEIHHSAPDHVREMLSREMKLEEQNVHQITGLLGLGDLMSFMELPLPELKDKKWTAIVPPPFQRYRDTEETEGALSVEEKSESFFGEIRKSDLYVHHPYHSFSATIQEFIELAAADPKVLAIKMTLYRTSGDSPIINALINAAENGKQVAVLVELKARFDEENNIVWARKLEKSGVHVVYGIVGLKTHTKTALVVRQEEDKIHRYVHIGTGNYNPKTAKLYTDLGLFSCREALGADLTDLFNFLTGHSRQRSYRKLLVAPVSLRDRMLVLIQRERDRAKKGEKAYIIAKMNALVDPKIIQTLYEASQAGVEIDLIIRGICCLRPGVEGVSENIRVISIIGRFLEHSRIFYFYNNGEEELYIGSADWMQRNLDRRIEAVVPIDDPNIFQDLKNILEIMLSDNRQAWELQPDGHYLQRQPGENEEVRSTHEILMQMALQSSTVT
>NC_019780.1|WP_015229351.1|1701374_1701830_+|NUDIX-hydrolase
MNQLSNFVFTVLGIIFRHPITGATIVPILENGEIVLVRRQDTGEWGLPGGIIDWGEDVSTAAKRELWEETGLEIIEIRRLVGVYSARDRDPRIHSISILVEADVQGNLAVQDNLEISEAKAFSPETLPFGDLAHDHERQLKDFLEGKTTLA
>NC_019780.1|WP_015229350.1|1699578_1700961_+|argininosuccinate-lyase
MTETNTWSNRFETALNPMIATFNASIPFDIILLPYDIQGSIAHAKMLAKTGIISEEEATQLVQGLQEILTEYENGEFHPDINEEDVHFAVEHRLTAKIGEVGKKLHTARSRNDQVGTDLRLYLQDKITHLRANLRHYQQALLNLAENHIDTLIPGYTHLQRAQPISLAHHLLAYWEMAQRDWERLGDVAKRTNISPLGCGALAGTTFPIDRDYTANELGFNDIYRNSLDAVSDRDFVIEFLNAASLIMVHLSRFSEEIIFWSSQEFNFVTLKDSCATGSSIMPQKKNPDVPELIRGKTGRICGHLQGMLMVMKGLPLAYNKDLQEDKEGLFDSVKTTESCLEAMTILLTEGLEFRKQRLEEAVAEDFSNATDVADYLANKGVPFREAYNLVGEVVKTSLAAGKLLKDLTLEEWQAIHPQFENDIYEAITPKQVVSARNSYGGTGFKEVRNAIEIAKTLTT
>NC_019780.1|WP_015229360.1|1722088_1723168_+|3-isopropylmalate-dehydrogenase
MTQTYQITLLPGDGIGPEIIGVTVKVLKAVGQQCDLEFKFTEGLIGGVAIDQTGNPLPQETLDICRESDAVLLAAIGGYKWDNLPRHQRPETGLLGLRAGLELFANLRPAKILPQLVDASSLKRNIVEGVDIMVVRELTGGVYFGEPKGVFSTENGQQRGVNTMAYTDAEIDRIGKVAFETAQKRNKKLCSVDKANVLEVSQLWRDRVTALSSSYPDIELSHLYVDNAAMQLVRDPKQFDIIVTGNLFGDILSDAAAMLTGSIGMLPSASMGEGKPGVFEPVHGSAPDIAGENKANPLAQVLSAAMMLRYGLDQPIAADKIEQAVFNVLDQGYRTGDIMSEGMTLLGCQEMGEVLLKSI
>NC_019780.1|WP_156800727.1|1723481_1723652_+|hypothetical-protein
MTDSNNIDHHFLTEAPDLLQNIETTLITLRFRKYPKRDRGAKSSALIFLFVSTKNN
>NC_019780.1|WP_015229361.1|1723806_1726437_+|type-I-DNA-topoisomerase
MSTLVIVESPTKARTIRKYLPNDYRVEASMGHVRDLPSSAKEVPAKVKEESWGRLGVNVEEGFKPVYVVPTDKKKVVRELKAALKEADELILATDEDREGESISWHLKELLNPKVPTKRMVFHEITREAIQEALKHCRDVDNDLVEAQETRRILDRLYGYTLSPLLWKKVARGLSAGRVQSVAVRLIVEKERERRAFKSGSYWDLKATLEQKKSEFEAKLTTLGGKKLATGSDFDPKTGKIAKGRDVVLLNEAEANALKDRLSDKQWTVKQVEERPTTRKPSPPFTTSTLQQESNRKLKISARDTMRTAQSLYENGYITYMRTDSVHLSEQAISAARTCVTEKYGKEYLSPKPRQYSTKSKGAQEAHEAIRPAGETFRSPQETGLQGRELALYDLIWKRTIASQMANAKLTQISVQLAVEDAEFRSSGKRIDFAGFFRAYVEGSDDPEAALENQEVILPDLKEGDHPNCKNLESLGHETQPPARYTEASLVKMLESEGIGRPSTYASIISTIIDRGYVQMRGNALTPTFTAFAVTSLLEQYFGELVDPHFTARMEKTLDHIAAGKADSTPYLEKFYFGEKGLNTLVEEKENEIDSSNAKAVHLDNIDVKIKIGYFGPYLETENGDGVVTASIPQDLTPADLNPEQVEVLLRQKTEGPDQVGIHPETGDPIFIKIGRYGPYVELGEETEGKKKPKRCSLPKGTQPEDVTLEMAVKLLSLPRHLGEHPTTGAPIKTAIGPYGPYVVHDQGKEGKDYRSLKKEDDVLSIELNRALELLSQPKKSRRGNQKELIKELGNHPDNEKPVKLYKGPHGPYINHGRKNASLPEGESPDKMTLERAVELLAEKTKTSSKTTAKSKTGTKKNTGTKTKTTRKKKTE
>NC_019780.1|WP_015229362.1|1726566_1727544_+|protein-methionine-sulfoxide-reductase-catalytic-subunit-MsrP
MIIRSPKPWQKERPPITAKRLYLNRRHFIKSLIGASLGATAFSLTGCQTSESKQALKNSLKQPKISPLTTNPNFASVERPITDEILAGSYNNFYEFGGNKSIWLKAQNLPTENWKVEVTGLVKNPKTYDLDEIKKQFPIEERIYRFRCVEAWSMVLPWVGFPMRELIKAVEPTAKAKFVRFTSRYDSEIMPGPTLHFGGLPWPYTESLRLDEMANELAFFAIGIYGEELPKQHGAPIRAVLPWKYGFKGAKSIVKIEFVAEQPDTYWHTLVPNEYGLIANVNPDVPHPRWSQATEKFISNGPNLSWEMKETQLYNGYGEYVAALY
>NC_019780.1|WP_015229363.1|1727562_1728867_+|HAMP-domain-containing-histidine-kinase
MFQTTRKRLALWYAVVTAVLLLLFATGVYCYVRSTLIERIDDTLKHVVEVVERSLIIEPIAISDHGYRLNIEASFRNDTETVEDDHIDLEWFDPQGKLLWSTFSDGFNYPLHKNRPVETVHISSGYLLRQVTEPVTFGKQTLGYLRVSHPWFEVTKPIRQLLLDLIMGISAMVVSVAGISWWLSGIAIQPVKESYQSLKQFTADASHELRNPIAMIQTNVQMALAYPDDASQQQQLQVIERLTQRLGRLVNDLLFLARSDSGMMETKRQSVSLDALLMEVMEEQSAIAQQKGIELNFTIPETDQGLTLNGDWDQLARLFTNLISNAIEHSLPHQTTVSPQITIQLQRLKRNHHDYLKVEVEDTGKGIPETELPHLFDRFYRVSPYPKATENQQVTGAGLGLAIAQAIVNNHQGQISVNSVREKGTTFIVMLPLH
>NC_019780.1|WP_015229364.1|1729028_1730741_+|hypothetical-protein
MRNQKSFTLILIILLGAILRLINLERKPLWLDEIITGLFTFGQGYDVIPRETLFPVETISNLLTYQPQTCSEIAQFLIQESTHPPLFFCLLHQWLGGIHAFSFFEIPLAIQLRSLPVIFGVIAILISYYLNQQAFSQTAGLMSAGIIAVSPFAVYLSQEARQYTLLLILISIALLALIQILKPVKNAWIYWLLWGITNSLGGYTHYFFILSFVAQTLILVLYFLWKSPRKLFLLFSVIVGIILSYLPWFPALITHFSSSTTDWLPDSDLFSPIYQLLLGFLVMVITLPVENQPILIQVISGSLMLSFGGWLIYQFSLGYRRLLQNKTTKKATLVLSLYLGLVLLQFLFIIYVLDKNISIAPRYNYVFYPAICSLLGASFSVGFYPPLPPLEKGGNYRDSLKRGGVILVGIISSLFVVFNLFFLKPYLPEVTAQRFDQSSDSILIVMGYKDEMDLALGLSYGLAFSQIQDQDLNHQFIFYNRDRGYDRIWQEISQLEIKVSDLWVIGTGLKQVAFPDELGLNNNQQNCQRDQKNYYRIGIPYQRYNCQFNYSNLRIRYEKGMQSSSPKIGG
>NC_019780.1|WP_083874479.1|1730762_1730993_-|hypothetical-protein
MPNSVDLDRTKLQQILVNLLNNAIKFTDRGSVTLKVERYNNKLNFSVTDTGVGISSTEKIYKQLSKILISLYSNQR
>NC_019780.1|WP_015229365.1|1731028_1732090_-|dTDP-glucose-4,6-dehydratase
MSRHLLVTGGAGFIGSNFVHYWLEHHPDDTIVVLDALTYAGNFENLKDLETCPNFHFVEGNITDRALVDQLLLNYQVNTIAHFAAESHVDRSILAPDAFIQTNIIGTFTLLEAFRHYSPKIETNPRFLHVSTDEVYGTLEPNDPPFKETTPYTPNSPYSASKAGSDHLVRAYYHTYNLPTFITNCSNNYGAYHYPEKLIPLMCINILLGKPLPVYGDGQNVRDWLYVVDHCRALDTVIQKGKPGETYNIGGNNEVKNIDLVKMLCQLMDELAPSLPVSSASDLITFVKDRPGHDRRYAIDASKIRNELGWQPSVTVEEGLRETVIWYLENRHWWEPLLSEEYQTYYQQLYGAD
>NC_019780.1|WP_156800729.1|1732330_1732516_-|hypothetical-protein
MVGEDRYPLFVIRYSLFVHWSLVTDHWSLITGWHYFPSWYDYFITGYVIWQEQHPKMAKIR
>NC_019780.1|WP_156800731.1|1732580_1732775_-|hypothetical-protein
MVSLQDFLKSLCSIEACQYGEGGYGERIYLLSGTFSKISNNSHYLETLYQETRSSATQHQSVTS

Crispr_ID: NC_019780_24

• CRISPR_ID: NC_019780_24
• CRISPR_location: 1780798-1780898
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_24

Consensus_repeat	Method
GCCCCCAGAATTGGGGGTTGGGG	CRISPRCasFinder

spacers of NC_019780_24

>24.1|1780821|55|NC_019780|CRISPRCasFinder
GCAATTCTTCAGCCGCGAAAGCCCCCAGAGGATTTAGAGTCAACTTAAAAGTAAC

CRISPR arrays and Neighbor proteins around NC_019780_24

CRISPR arrays

The CRISPR arrays of NC_019780_24

>merge|NC_019780|24|1780798-1780898|CRISPRCasFinder
GCCCCCAGAATTGGGGGTTGGGGGCAATTCTTCAGCCGCGAAAGCCCCCAGAGGATTTAGAGTCAACTTAAAAGTAACGCCCCCAGAATTGGGGGTTGGGG

>NC_019780|24|24|1780798-1780898|CRISPRCasFinder
GCCCCCAGAATTGGGGGTTGGGG	GCAATTCTTCAGCCGCGAAAGCCCCCAGAGGATTTAGAGTCAACTTAAAAGTAAC
GCCCCCAGAATTGGGGGTTGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235404.1|1789346_1789547_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229405.1|1768779_1771803_-|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl|CDD|366019
NC_019780.1|WP_015229410.1|1777892_1778216_-|thiol-reductase-thioredoxin	unknown	unknown	gnl|CDD|200072
NC_019780.1|WP_015229411.1|1778533_1780762_+|formate-C-acetyltransferase	unknown	unknown	gnl|CDD|153087
NC_019780.1|WP_015229418.1|1789807_1791310_-|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|235810
NC_019780.1|WP_015229413.1|1781746_1784389_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl|CDD|237515
NC_019780.1|WP_015229408.1|1774183_1776079_-|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl|CDD|214386
NC_019780.1|WP_015229416.1|1788229_1789231_+|phosphoribulokinase	unknown	unknown	gnl|CDD|215198
NC_019780.1|WP_015229403.1|1766434_1767502_-|glycine-betaine/L-proline-ABC-transporter-substrate-binding-protein-ProX	unknown	unknown	gnl|CDD|236852
NC_019780.1|WP_015229407.1|1772431_1773514_+|photosystem-II-q(b)-protein	unknown	unknown	gnl|CDD|130221
NC_019780.1|WP_015229409.1|1776576_1777782_-|FAD-binding-protein	unknown	unknown	gnl|CDD|99804
NC_019780.1|WP_071880305.1|1784756_1784978_+|hypothetical-protein	unknown	unknown	gnl|CDD|225236
NC_019780.1|WP_015229406.1|1771996_1772206_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_083874398.1|1787782_1787917_+|DUF86-domain-containing-protein	unknown	unknown	gnl|CDD|225236
NC_019780.1|WP_015229402.1|1764892_1766107_-|hypothetical-protein	unknown	unknown	gnl|CDD|376627
NC_019780.1|WP_015229404.1|1767770_1768730_-|glutathione-synthase	unknown	unknown	gnl|CDD|235371
NC_019780.1|WP_015229414.1|1784476_1784767_+|nucleotidyltransferase-family-protein	unknown	unknown	gnl|CDD|224583
NC_019780.1|WP_015229415.1|1785044_1787006_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015229419.1|1791686_1793546_-|NAD(P)H-quinone-oxidoreductase-subunit-F	unknown	unknown	gnl|CDD|236008
NC_019780.1|WP_015229412.1|1780910_1781663_+|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl|CDD|131546

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015229415.1|1785044_1787006_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	2.5e-47	155.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229405.1|1768779_1771803_-|phosphoenolpyruvate-carboxylase	gnl|CDD|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
NC_019780.1|WP_015229410.1|1777892_1778216_-|thiol-reductase-thioredoxin	gnl|CDD|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.66287e-30
NC_019780.1|WP_015229411.1|1778533_1780762_+|formate-C-acetyltransferase	gnl|CDD|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
NC_019780.1|WP_015229418.1|1789807_1791310_-|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|235810	PRK06473, PRK06473, NADH-quinone oxidoreductase subunit M.	0
NC_019780.1|WP_015229413.1|1781746_1784389_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl|CDD|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NC_019780.1|WP_015229408.1|1774183_1776079_-|ATP-dependent-zinc-metalloprotease-FtsH	gnl|CDD|214386	CHL00176, ftsH, cell division protein; Validated.	0
NC_019780.1|WP_015229416.1|1788229_1789231_+|phosphoribulokinase	gnl|CDD|215198	PLN02348, PLN02348, phosphoribulokinase.	0
NC_019780.1|WP_015229403.1|1766434_1767502_-|glycine-betaine/L-proline-ABC-transporter-substrate-binding-protein-ProX	gnl|CDD|236852	PRK11119, proX, proline/glycine betaine ABC transporter substrate-binding protein ProX.	3.35085e-170
NC_019780.1|WP_015229407.1|1772431_1773514_+|photosystem-II-q(b)-protein	gnl|CDD|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NC_019780.1|WP_015229409.1|1776576_1777782_-|FAD-binding-protein	gnl|CDD|99804	cd06208, CYPOR_like_FNR, These ferredoxin reductases are related to the NADPH cytochrome p450 reductases (CYPOR), but lack the FAD-binding region connecting sub-domain. Ferredoxin-NADP+ reductase (FNR) is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins, such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2, which then transfers two electrons and a proton to NADP+ to form NADPH. CYPOR serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases, sulfite reducatase, and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. CYPOR has a C-terminal FNR-like FAD and NAD binding module, an FMN-binding domain, and an additional connecting domain (inserted within the FAD binding region) that orients the FNR and FMN -binding domains. The C-terminal domain contains most of the NADP(H) binding residues, and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule, which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	1.54695e-160
NC_019780.1|WP_071880305.1|1784756_1784978_+|hypothetical-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	5.92693e-07
NC_019780.1|WP_083874398.1|1787782_1787917_+|DUF86-domain-containing-protein	gnl|CDD|225236	COG2361, COG2361, Uncharacterized conserved protein [Function unknown].	5.22674e-09
NC_019780.1|WP_015229402.1|1764892_1766107_-|hypothetical-protein	gnl|CDD|376627	pfam01837, HcyBio, Homocysteine biosynthesis enzyme, sulfur-incorporation. This presumed domain is about is about 360 residues long. The function of this domain is unknown. It is found in some proteins that have two C-terminal CBS pfam00571 domains. There are also proteins that contain two inserted Fe4S domains near the C-terminal end of the domain. The Methanothermobacter thermautotrophicus gene MTH_855 product has been misannotated as an inosine monophosphate dehydrogenase based on the similarity to the CBS domains. Based on genetic analyses in the methanogen Methanosarcina acetivorans, this family is a key component of the metabolic network for sulfide assimilation and trafficking in methanogens. It is essential to a novel, O-acetylhomoserine sulfhydrylase-independent pathway for homocysteine biosynthesis, and may catalyze sulfur incorporation into the side chain of an as yet unidentified amino acid precursor. The DUF39-CBS and DUF39-ferredoxin architectures repeatedly occur together in the genomes of methanogenic Archaea, suggesting they may be of diverged function. This is consistent with a phylogenetic reconstruction of the DUF39 family, which clearly distinguishes the CBS-associated and ferredoxin-associated DUF39s.	0
NC_019780.1|WP_015229404.1|1767770_1768730_-|glutathione-synthase	gnl|CDD|235371	PRK05246, PRK05246, glutathione synthetase; Provisional.	8.18324e-173
NC_019780.1|WP_015229414.1|1784476_1784767_+|nucleotidyltransferase-family-protein	gnl|CDD|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	3.83768e-25
NC_019780.1|WP_015229415.1|1785044_1787006_-|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	2.65759e-123
NC_019780.1|WP_015229419.1|1791686_1793546_-|NAD(P)H-quinone-oxidoreductase-subunit-F	gnl|CDD|236008	PRK07390, PRK07390, NAD(P)H-quinone oxidoreductase subunit F; Validated.	0
NC_019780.1|WP_015229412.1|1780910_1781663_+|pyruvate-formate-lyase-activating-protein	gnl|CDD|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	3.08118e-121

Protein sequences

>NC_019780.1|WP_015229411.1|1778533_1780762_+|formate-C-acetyltransferase
MLTQTATFIPGKWVENIDVRDFIQKNYTPYTGDDSFLVEPTENTKKLWDQVQLLMAKERENGILDTDTKVPAGITAHAPGYIDQTLEKIVGLQTDKPLKRAIMPYGGIRVVKKSLESYGYELDPQTEEIFTKYRKTHNDGVFSAYTKSMRLARRSGVITGLPDAYGRGRIIGDYRRVALYGINHLVEEKKLQLESLENEMMSEEIIRLREEISEQITALQDLEKMGASYGFDLSQPAKNAKEAIQWTYFGYLGAVKEQNGAAMSLGRVSTFLDIYIEKDLQAGLITETEAQEMVDHFVMKLRMVRFLRTPEYNQLFSGDPTWVTECLGGMGVDGRPLVTRTNFRFLHTLYNLGPAPEPNLTVLWSESLPVNFKRYCAKVSIDTSSIQYENDDLMRGEYGDDYGIACCVSAMRIGKQMQFFGARVNLAKALLYAINGGVDEKSGDQVAPPSTPIKSDYLDYDEVMEKFEGLMGWLSKLYVNALNIIHYMHDKYAYERLQMALHSRDVYRTMACGMAGLSVVADSLAAIKYAKVKVLRDENGLAVDYQIEGDYPKFGNNDDRADSIAVNLVTDLMNHIRQHQTYRQATPTQSILTITSNVVYGKKTGNTPDGREAGKPFAPGANPMHGRDTKGAIAALSSVAKLPYDNAKDGISYTFSIIPQALGKGDDNRISNLTGMLDGYFHDTGHHVNINVLNRETLLDAMDHPEKYPQLTIRVSGYAVNFVKLTREQQEDVISRTFHGQV
>NC_019780.1|WP_015229410.1|1777892_1778216_-|thiol-reductase-thioredoxin
MTETAYIQSEAELDELIANPTLLVVDCTATWCGPCKLVAPLIDQLNEAYSDRAQIRKLDLDDHKPVAKRFEVRSIPAVMFFKGGEQVETLVGAKTYDEYSTTLEKYL
>NC_019780.1|WP_015229409.1|1776576_1777782_-|FAD-binding-protein
MYGPVPSANTLKNTEYANRFFVYEVEGLRQNEATDQVESPIRKSGSVFITVPYNRMNQEMQRITRMGGKIKSIKPLNGNNHSDQAGTTAEQGKDKKAAMSETKAKAKAKSDVPVNIYKPKNPLIGKCVGNQELVKEGGIGRVRHLTFDVSDSDLWYLEGQSIGIIPPGENEKGKPHKLRLYSIASTRHGDQGDDNTVSLCVRELVYQHPETNETIYGVCSSYLCNLDEGADVTITGPVGKEMLLPEDPNATIIMMATGTGIAPYRAYLRRMFQEKHEDYKFNGFAWLIFGVPYQQNILYKEDLEKMQQEFPDNFRLTYALSREQKTADGKKMYIQNRVAEQVSEIWELLQKENTHTYICGLKGMEDGIDEALSAEAEKHGANWSDFQKSMKKAGRWHVETY
>NC_019780.1|WP_015229408.1|1774183_1776079_-|ATP-dependent-zinc-metalloprotease-FtsH
MKLPWRVILLWTLPILVVGFFLWQGTFSPNAGELTGNNAANTRLSYGRFLEYLESDRVQAVDLYDNGRTAIVQANDPQVSGNTQRYRVDLPENAPELITKMRESDVAIDSHDNGDNGAIWGFLGNLIFPVLLIGALFFLFRRSNNAGGGPGQAMNFGKSRARFQMEAKTGVLFDDVAGVEEAKEELQEVVTFLKQPERFTAVGAKIPKGALLIGPPGTGKTLMAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDTALLRPGRFDRQISVDAPDVKGRVSILNVHARNKKLSPEVSLESIARRTPGFTGADLANLLNEAAILTARRRKDAITLAEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIIGTLVKDHDPVQKVTLIPRGQAQGLTWFTPNEEQMLISRSQLKARITGALGGRAAEEEVFGDAEVTSGAGGDLQQLTAMARQMVTRFGMSDLGPMSLESQNSEVFLGGGLMNRSEYSEEIASRIDAQVREIVEQCHQNARQIIRDHRVAIDRLVDLLIEKETIDGDEFRQILSEYTDIPEKEQYVPQMQQ
>NC_019780.1|WP_015229407.1|1772431_1773514_+|photosystem-II-q(b)-protein
MTTTLQQQQSQNIWERFCQWVTSTNNRLYVGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIAFHFLIGIFCYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGALFSAMHGSLVTSSLVRETTENESQNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVINTWADVLNRANLGFEVMHERNAHNFPLDLAAGESTPVAMQAPEING
>NC_019780.1|WP_015229406.1|1771996_1772206_-|hypothetical-protein
MAEKVNQSKQTEVEIALSILSTPFLMGLIGARSMQQGLISIGEASEEIFRRDRLPVLHFQQENEIEIKD
>NC_019780.1|WP_015229405.1|1768779_1771803_-|phosphoenolpyruvate-carboxylase
MSSLLQASSEDTNDASRDQFLDRRIKLIEKLWESVLRAECGQELVNLLQQLRSMGSPEGQATGLPTSSVPQLIEELPLNDAVRAARAFALYFQLINIVEQHYEQREQQLNRLGDEEKNNKQFSHQKEAEPQHSLLGAELLEKTWQGNSTYQKAGTFNWLFPYLKRLNVPPQQVQRLLNQLEVRLVFTAHPTEIVRQTIRKKQRRIAKILEQIDYNEATTKSLNFFESPEAVESTEQLEEEIRLWWRTDELHQFKPEVLDEVDYALHYFQEVLFDTMPQLAKRLKKALKGSFKELTPPRNHFCRFGSWVGADRDGNPSVTPEVTWETACYQRGIVLERYLHSVKQLTTLLSLSLHWSDVLPELLESLEDDRAVMPEVYERLAIRYRREPYRLKLAYIEKRLEHTIQRNQSLYSGEQSQQEAIKKHPKTIYKSDADFLAELKLIQRNLIETGLACQDLEDLIAQVEIYGFNLAELDMRQESSRHSETLDEITEYLQILPQSYHQLSESERVKWLSEELQTRRPLIPGELPFSEKTQETVETFRLLKKLQQEFGTQVCRTYIISMSHEVSDILEVLLLAKEAGIYDPATGSCSLQVVPLFETVDDLLSAPEIMKALFELPLYRACLAGGYGLEKASNQYDIQEVMLGYSDSNKDSGFLSSNWEIHKAQKALQSLAEGYGVSLRIFHGRGGSVGRGGGPTYEAILAQPSSTINGRIKITEQGEVVASKYSLPDLALYHLETATTAVIQGSLLGSGFDDIGPWNSIMEELADRSRQHYRSLIYEEPDFLDFFLSVTPIQEISQLQISSRPARRQGGKKDLSSLRAIPWVFSWTQTRFLLPAWYGVGTALKGFLDEETERNREHNLKLLRYFYWKWPFFRMVVSKVEMTLAKVDLQIAHHYLKELANSEDYDRFERIFKQIADEYYLASELIRLITDHEKLLDGDPDLQRSVQLRNRTIVPLGFLQVSLLKRLREYSNQSASGVIHFRYSKEELLQGALLTLNGIAAGMRNTG
>NC_019780.1|WP_015229404.1|1767770_1768730_-|glutathione-synthase
MKFAFITDPLAQLDPTHDTTVALMEAAQAQGHEVWVTSASYLSIVQSQAWARLQPVSLTPVKLENDHWVAPKEWYQVGKWELQPLTAMDAVFMRTDPPVTIPYLYATQILDLLTPTSTRVINSPRGLQRANEKLYAMQFRSVIPETIVSLDKKVIREFVERKDGAVLKPLGGKAGEGILFLEKSDKNLNSLIEISTEKGKEPVMIQSFLPEAKNGDKRIILLAGEPIGAVNRVPTGGEFRGNMAVGGRVEAAEITMRDWEICSAITPTLLEDGLFFVGIDVIGGYLTEINVTSPTGIREIDRLDQVSLGKKVMEWLQKF
>NC_019780.1|WP_015229403.1|1766434_1767502_-|glycine-betaine/L-proline-ABC-transporter-substrate-binding-protein-ProX
MRPTYKRLSTVTASLVLLLGTAACQQQTEQPTEGTSDQPGAGVEVTPAYSVLEEKFQTEIVNMALEELGYDVTPPKELEYATLHTDLANGGIHFTTVHWEKLHSDFYTNSGGDEKLERMGVFVDNVLQGYSVDKATAEENNITNLEDLKDPEIAKVFDTDGNGKANLTGCNPGWGCELVIEHHLDEYGLRDTVEHDQGQYFALMADTITRHEQGEPILYYTWTPLWVGGVLQAGKDVNWLEVPYTSLPEAQGEVSEETTTANINGEDVNLGFAVDQMRILANQQFVDEHAAAAKLFEVIQVSRPDISAQNQKMRNGEDSPEDIMSHAEAWVEENRDQFDQWVSTAREAGQQQAQK
>NC_019780.1|WP_015229402.1|1764892_1766107_-|hypothetical-protein
MRTIAQIKEKIKDKKAVVWTVEELKAQVAEKGVTQVTKEVDVVTTGTFEPMESSGAMINLGHTDPPINIRQCWLDSVPAYAGLGAVDLYIGATAIPDYSNSGEASELETRLGVSHKERGGGHIIQNLIAGQSVQLKAIGQVSDCYPRASFQTTLTRDTINQFYLYNPRNVYQNFIVGVNAGERVLHTYLGPLHPNLGNAVYSSPGAIAPLFNDPQLKLIGIGSPVFLGGAVGYIACEGTQHFPKQRRLENQTPIGPAATLTLVGDGKAMNPRWVRGCYFKNYGPSLMLGVGIPLPMLNEEAVANCAVTDEEIVAPIVDFSIPRRVRPTFGLVTYAQLKSGTIKIEGETVRTAPLASIVRSREVAATLKEQVIAGTFPIQAPIAPLPMDRAFLPQDRWGSQFALE
>NC_019780.1|WP_015229412.1|1780910_1781663_+|pyruvate-formate-lyase-activating-protein
MLTNTPTETKGRIHSIESCGTVDGPGIRFVIFTQGCPLRCLYCHNPDCRHIEDGKEATIEELITEIQKYRSYMRFSGGGVTVTGGEPLMQPEFVTEIFKQCQALGIHTALDTSGYVPIAAAKPVLDYTDLVLLDIKSYKPDIYRTVTSVSVEPTLNFARYLSEIKQPTWVRFVLVPNLTDSVENIKELAAFVASLQNVEKLEVLPFHQMGTYKWEKLGYDYQLKETKPPSPDLIASTINIFQSYGIKVSY
>NC_019780.1|WP_015229413.1|1781746_1784389_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MTVTNLQELETLISNVKAAQAKYATFPQEKVDAIFKKAALAANMNRIPLAKMAVEETGMGVQEDKVIKNHFASEIIYNKYKHEVTCGVIESDPHYGIQKLAEPLGVLAGIVPTTNPTSTAIFKALIALKTRNAIIFSPHPRAKECTIEAAKIVRDAAIEAGAPADIIGWIDEPTIELSQTLMKHPSINLILATGGPGMVKAAYSSGKPSLGVGAGNTPAVIDETANIPMAVSSILISKTFDNGMICASEQSVIVADEVYEKVKQEFIDRGAYFLTPEETEKIREILIIEGRINPKIVGQSVQKIAEIAGMEVGENTKVLIGEVEDISLEEAFAHEKLSPVLAMYHGQNFEEATTKAQQLISLGGRGHTSVLYTAQKNHARILHFESKLTTGRVLINTPSSQGAIGDLYNFKLDPSLTLGCGTWGGNSVSENVAPHHLLNIKTVSERRENMLWFRVPPKIYFKFGCLPVALQELKGKKRAFIVTDKPLFDMGVLKEVTDVLDEIGLEHQVFYDVKPDPKLGEINKGVEAMNSFQPDVIISFGGGSPMDAAKIMWLMYEHPEVEFEGVATRFMDIRKRVYDLPPLGEKAMMIAVPTTSGTGSEVTPFAVVTDEKTGIKYPLADYALTPNMAIVDPELVMHLPKRLTAYGGIDALTHALEAYVSVVATEFTQGLALEAVELLFKYLPNAYKYGANDPVAREKVHYAATIAGMAFANSFLGICHSMAHKLGATFHVPHGLANALMISHVIRYNTTDAPFKQAIFPQYEYPHAKERYARLADYLKLGGETLDEKVENLVSAIERLKQELDVPLTIKETLHGDDREFYEQLENLAEQAFDDQCTVANPRYPLIKDLKELYVLAYQGCRVDSMMYHPETEPTADYVV
>NC_019780.1|WP_015229414.1|1784476_1784767_+|nucleotidyltransferase-family-protein
MEKEKVLQILETHQNRLDEFAVKTLFLFGSVARGEATPESDVDFLVEFKRPVGLFTLLGLQRYLEDLLNCSVDVGTLKSLRPHLRETVLKEAVRVF
>NC_019780.1|WP_071880305.1|1784756_1784978_+|hypothetical-protein
MSSREFKRRVQDILSEISFIEQSIEGLSFEIFIEDEQALRAILYSLAVIGEAVGSVSYLSRKVALPTRLQNRT
>NC_019780.1|WP_015229415.1|1785044_1787006_-|group-II-intron-reverse-transcriptase/maturase
MNLLKYESNAEVKTFLNFPFWLSFGLLLMEKTEWNQVDWKQVEINVFKLQKRIFRASQSGDVAKVHKLQRLLLRSWSAKLLAVRRISQDNQGKNTAGVDGVKSLNPKQRLNLAENLTLTGKGKSLRRVYIPKPGKAEKRSLGIPVMEDRARQALLKLAMEPEWEAKFEPNSYGFRPGRSCHDAEGAIYVSINQKPKWVLDADISKCFDRINHDVLLRKLNTTPTIARQIRAWLKSGVLDRGDWMPTEEGTPQGGVISPLLANIALHGLEEYIKQWAETWKGYKNENGRQMSKINRRQSITLIRYADDFVVLHRDKSIVQQAKTLIEHWLHGLGLELSESKTRICHTLYDSEEEEAGFDFLGWNVRQYSVGKDHSGKNAQGKLLGFKTLIKPSDKSIKRHYEKIVRVLDSMRGKSQEAIIGKLNSIIVGFCNYHNAVCSKEAFKRLDYMVYNKLRRWMKRRHANKTPKWCEQRYFHWTKEKSLKGDDRIDKWVFSTPSEVPNSSVAGKHELRKHAWTPIKYHKKIEGTRSPFDGDWRYWSKRRGKYPGVKKRVSKLMVKQNGKCARCGLYFNDEDVLEVDHIIPKAEGGKDEDKNLQLLHRHCHHEKTAEDSKRQAQEKIKHKSTIDVKIKVDNNGEEYVDYVEIDDKLWERLV
>NC_019780.1|WP_083874398.1|1787782_1787917_+|DUF86-domain-containing-protein
MRNAIVHEYFQVDVELIWETIQTDLPTLKIALQRILISLESEPS
>NC_019780.1|WP_015229416.1|1788229_1789231_+|phosphoribulokinase
MNTESNRVVLIGVAGDSGCGKSTFLRRLKDLFGEKFMTVICLDDYHSLDRKGRKAAGVTALNPKANNFDLMYEQVKALKEGHAIDKPIYNHETGELDPPERIEPNKVVVIEGLHPLYDERVRELIDFSVYLDISDEVKINWKIKRDMAERGHTYEDVLASINSRKPDFTAYIEPQKEFADIVIQVLPTQLIEDKESKYLRVRLIQKEGVEGFDPVYLFDEGSTIDWRPCGRKLTCAYPGIKLFYGPDSYYGHEVSVLEVDGYFDNLDEMIYIESHLSKTATKFYGEMTELLLKHPDAPGSNDGTGLFQVLVGLKMRETYELLTKEEAKAAARV
>NC_019780.1|WP_041235404.1|1789346_1789547_+|hypothetical-protein
MLRFWLVCFGILFAMVELWGWLQELTLSFPLCILGGIVLAIVSNLKFSPLPSSATHLTLPPQRSDQ
>NC_019780.1|WP_015229418.1|1789807_1791310_-|NADH-quinone-oxidoreductase-subunit-M
MLSALIWIPVIGGIIIGFLPQKQAEKSRLFALIVASILLVITIIIGFEFDPNVNGLFLSESFSWLEQIGLNYYIGVDGLALPLLFLNSFLTLVAIYASNPKLDRPRFYYALLLLLSAGTAGAFLAQNVLLFFLFYEIELIPLYFLIAIWGGTNRGYAATKFLLYTAISGALVLASFLGLVWLSGASSFDYEPLRSQMLPLSSQIVLLIILLAGFGIKIPIFPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPDAWGVLAPYLAIWAAISALFGALAAISQKDMKRVVAYSSIAHMAYILLAAAAATPLSLVAAVAQMISHGLISALLFLLVGVVGKKTGTRDVDTLRGLLNPERGLPIIGSLMILGVMASAGIPGMVGFISEFLVFRGTFSVFPIATLLCLVGTGLTAVYFLLMINRVFFGRLPQAFSNLPPVPWSDRIPAIILAVLIVILGLQPSWLVRWSETETAFLYNNEQLISNFRPLISGSLDR
>NC_019780.1|WP_015229419.1|1791686_1793546_-|NAD(P)H-quinone-oxidoreductase-subunit-F
MGDLLVQGTWLIPFYGLFGALLTLPWSMRMIRRTGSRPAAYVNLLLSAIAFLHGSIVLWLTWEKPPQEIVWHWLKVADLDLTLAIEISPVSIGALELVSGITVVTLIYGLGYLEKDWSLGRFYGLMGFFAAALSGIALSDSLLLTYGLLELLTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDIILLMGVVALSSYGVDLTFTGIEEWSQTADLAPFSATLLGLALIAGPIGKCAQFPLNLWLDEAMEAPSPASLMRNSIVVTSGAYVLIKLHPIFELSPIVREVLIAVGLVTAVGASFVAIAQIDIKRTLSHSTSVYLGLVFVAVGFGRLDIALLLLLIHAIAKTLMFMSVGAIIFTTNDQNITQMGGLWSKMPVTALSFLVGSSGLVVLLPLGNFWVMGQWIESFNTLPQWLLPFVMLINALSAINLTRVFRLVFLGETQPKTRRAPEVSWPMAFPMVALIIIALLAPLIPQKWQLWFAETGSLATTVEVINQPEMLLLVLSGFVGVILGGTIALPRTWMRPVSSSSRFLQDFLAYDFYLERVYRWSVVLVVELASKFSAWLDRYIIDGIVNLIGFGTLFSGQSLKYSASGQSQFYLLTILISGALLLMLLINWSF

Crispr_ID: NC_019780_25

• CRISPR_ID: NC_019780_25
• CRISPR_location: 1849181-1849256
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_25

Consensus_repeat	Method
TAGAAAAGTAGGTTGGGTGGAGA	CRISPRCasFinder

spacers of NC_019780_25

>25.1|1849204|30|NC_019780|CRISPRCasFinder
GAAGCGTAACCCAACACCAATCACGAAAGC

CRISPR arrays and Neighbor proteins around NC_019780_25

CRISPR arrays

The CRISPR arrays of NC_019780_25

>merge|NC_019780|25|1849181-1849256|CRISPRCasFinder
TAGAAAAGTAGGTTGGGTGGAGAGAAGCGTAACCCAACACCAATCACGAAAGCTAGAAAAGTAGGTTGGGTAGAGA

>NC_019780|25|25|1849181-1849256|CRISPRCasFinder
TAGAAAAGTAGGTTGGGTGGAGA	GAAGCGTAACCCAACACCAATCACGAAAGC
TAGAAAAGTAGGTTGGGTAGAGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800740.1|1854566_1854770_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800739.1|1851587_1851743_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800880.1|1843251_1843365_-|AraC-family-transcriptional-regulator	unknown	unknown	unknown
NC_019780.1|WP_041235409.1|1843486_1845493_+|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl|CDD|236137
NC_019780.1|WP_015229468.1|1840408_1841305_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_019780.1|WP_015229470.1|1842058_1842991_-|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl|CDD|272993
NC_019780.1|WP_015229480.1|1854791_1855241_+|pre-peptidase	unknown	unknown	gnl|CDD|367843
NC_019780.1|WP_015229465.1|1837962_1839369_+|aspartate-ammonia-lyase	unknown	unknown	gnl|CDD|237031
NC_019780.1|WP_015229467.1|1839987_1840389_-|fasciclin-domain-containing-protein	unknown	unknown	gnl|CDD|225214
NC_019780.1|WP_015229475.1|1849395_1851078_+|glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223651
NC_019780.1|WP_015229482.1|1856650_1858483_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|273521
NC_019780.1|WP_015229483.1|1858584_1859601_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl|CDD|235066
NC_019780.1|WP_015229481.1|1855256_1856054_+|5'/3'-nucleotidase-SurE	unknown	unknown	gnl|CDD|234732
NC_019780.1|WP_015229473.1|1845853_1847245_-|anthranilate-synthase-component-I	unknown	unknown	gnl|CDD|235651
NC_019780.1|WP_015229474.1|1847974_1849102_+|RNA-polymerase-sigma-factor,-RpoD/SigA-family	unknown	unknown	gnl|CDD|274382
NC_019780.1|WP_015229476.1|1851279_1851585_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229469.1|1841382_1842033_-|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319799
NC_019780.1|WP_015229478.1|1853607_1854540_+|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|161659
NC_019780.1|WP_015229466.1|1839378_1839681_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229477.1|1852059_1853604_+|alanine:cation-symporter-family-protein	unknown	unknown	gnl|CDD|376500

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229483.1|1858584_1859601_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl|CDD|235066	PRK02746, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase PdxA.	0
NC_019780.1|WP_015229477.1|1852059_1853604_+|alanine:cation-symporter-family-protein	gnl|CDD|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	1.04046e-140
NC_019780.1|WP_041235409.1|1843486_1845493_+|NAD-dependent-DNA-ligase-LigA	gnl|CDD|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NC_019780.1|WP_015229468.1|1840408_1841305_-|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.94782e-32
NC_019780.1|WP_015229470.1|1842058_1842991_-|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl|CDD|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	2.53779e-124
NC_019780.1|WP_015229480.1|1854791_1855241_+|pre-peptidase	gnl|CDD|367843	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain. This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (pfam00801) domain, which also are found in this context. Visual analysis suggests that PKD and PPC are distantly related (personal obs:Bateman A, Yeats C).	4.78032e-05
NC_019780.1|WP_015229465.1|1837962_1839369_+|aspartate-ammonia-lyase	gnl|CDD|237031	PRK12273, aspA, aspartate ammonia-lyase; Provisional.	0
NC_019780.1|WP_015229467.1|1839987_1840389_-|fasciclin-domain-containing-protein	gnl|CDD|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	7.47293e-53
NC_019780.1|WP_015229475.1|1849395_1851078_+|glycerol-3-phosphate-dehydrogenase	gnl|CDD|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	2.30461e-177
NC_019780.1|WP_015229482.1|1856650_1858483_-|AAA-family-ATPase	gnl|CDD|273521	TIGR01243, Cell_division_cycle_protein_48_homolog_MJ1156, AAA family ATPase, CDC48 subfamily. This subfamily of the AAA family ATPases includes two members each from three archaeal species. It also includes yeast CDC48 (cell division control protein 48) and the human ortholog, transitional endoplasmic reticulum ATPase (valosin-containing protein). These proteins in eukaryotes are involved in the budding and transfer of membrane from the transitional endoplasmic reticulum to the Golgi apparatus.	0
NC_019780.1|WP_015229481.1|1855256_1856054_+|5'/3'-nucleotidase-SurE	gnl|CDD|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.06371e-126
NC_019780.1|WP_015229473.1|1845853_1847245_-|anthranilate-synthase-component-I	gnl|CDD|235651	PRK05940, PRK05940, anthranilate synthase component I.	0
NC_019780.1|WP_015229474.1|1847974_1849102_+|RNA-polymerase-sigma-factor,-RpoD/SigA-family	gnl|CDD|274382	TIGR02997, RNA_polymerase_sigma_subunit_sigma70/sigma32, RNA polymerase sigma factor, cyanobacterial RpoD-like family. This family includes a number of closely related sigma-70 (TIGR02937) factors in the cyanobacteria. All appear most closely related to the essential sigma-70 factor RpoD, and some score above trusted to the RpoD C-terminal domain model (TIGR02393).	6.87963e-147
NC_019780.1|WP_015229469.1|1841382_1842033_-|HAD-IA-family-hydrolase	gnl|CDD|319799	cd04303, HAD_PGPase, phosphoglycolate phosphatase, similar to Synechococcus elongates phosphoglycolate phosphatase PGP/CbbZ. Phosphoglycolate phosphatase catalyzes the dephosphorylation of phosphoglycolate; its activity requires divalent cations, especially Mg++. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.23848e-67
NC_019780.1|WP_015229478.1|1853607_1854540_+|RluA-family-pseudouridine-synthase	gnl|CDD|161659	TIGR00005, Ribosomal_large_subunit_pseudouridine_synthase_D, pseudouridine synthase, RluA family. In E. coli, RluD (SfhB) modifies uridine to pseudouridine at 23S RNA U1911, 1915, and 1917, RluC modifies 955, 2504 and 2580, and RluA modifies U746 and tRNA U32. An additional homolog from E. coli outside this family, TruC (SP|Q46918), modifies uracil-65 in transfer RNAs to pseudouridine. [Protein synthesis, tRNA and rRNA base modification].	2.57828e-117

Protein sequences

>NC_019780.1|WP_015229474.1|1847974_1849102_+|RNA-polymerase-sigma-factor,-RpoD/SigA-family
MTDIKLMTSQNTKPEESLTPIEGIETIIAPLEETDASEGQLVEVDFSQEDDGDVNPYQGSKSDDTVGAFFKEMARYPLLQPDEEIELAQKVKFLADMENKRQELAIESGSSPTKEELAATVSLSVKELERKLHQGRLAKRQMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRATEKFDPNKGYKFSTYAYWWIRQAITRTIANDARTIRLPIHIVEKLNKLKKVQRDLKQELQRNPTEEELAAGLDISQSQLHQLLQLRRQSLSLNHRVGKGEDTELLELLEDHEMRLPEDQMNETMMNQELSDVLGDVLNEREKDVISLRYGLNTSHPYTLEEVGYFLNLSRERVRQIQSKAMRKLRRPQVARRLKGWL
>NC_019780.1|WP_015229473.1|1845853_1847245_-|anthranilate-synthase-component-I
MSTGEQKQWLWRSKPLQQRTGSEIFRHLFGENTTYGVLLESPSPSIGNQPQLSRYSICAGDPRLVNDQFQVWTPPVGNILPCLNQLYQRCSPDFPSEVSHLPFTGGYLGWLGYDLAWEIEKLPQCNPDPLPFPTAFWYEPETFAVLDHEKQVLWLAGSDFNQLDQLETALASPIPEFSFSLPDPNDFSPPTFLTNATDYQEMVRRAKDYIYAGDIFQTNLSLRFQAETQSSSWQIYQALQRINPSPFASYWRTPWGDLISCSPERLVQRQGNLCQTRPIAGTRPRGQSSIEDQQLAIALRNNTKEQAEHIMLVDLERNDLGRVCEWGSVKVNELLTIEHYSHVMHLVSNVQGILKANCNHVDLIRSVFPGGTITGCPKVRCLEIIEELEPFRRSLFYGSCGYLDQRGDLDLNILIRTLLYANGTVWGQVGAGIVADSDPQREWEESLSKGKAQVSAISASSQP
>NC_019780.1|WP_041235409.1|1843486_1845493_+|NAD-dependent-DNA-ligase-LigA
MNQLRRQLQRANYAYYLQDDPIMQDEVYDRLYRELQALEEKYPDLVTPDSPTQRVGGGVAEGFVSVKHNIPLYSLENAFDLGELAQWVARLQGQVGDDETVEYVCELKIDGNALALTYEDGVLVRGVTRGDGETGEDITNNVRTIRAIPLRLAMENPPARVEVRGEAFLPRQRFEKINQMRQEKGESLFANPRNATSGTLRQFDPKVVAQRQLDFFAYTLYVVDENAETPTTQAESLELLAEMGFQVNPQREVCQSLKTVGEFFETWEKKRASLLYDTDGVVVKINSYALQEKLGFTQKFPRWAIALKFPAEEVPTKLRAITINVGRTGAVTPLAHLEPISLAGTTVQRATLHNMDFIQELGVKIKDTVVVRKAGDIIPEIVRVLPELRPKSARDFKMPTECPECGSTLVRPEGEAVTRCVNVSCPAILRGSLVHWASRDAMDINGLGEKMVESLVRGELVKSVADLYRLTVQQLTQLERVGEKSAQALVSAIEQSKQQPWSRVLYGLGIRYVGKVTAETLSASFPTVEALSSATVEDLQAVEGVGAEIARSVYQWFQIEANQTLVQQLQSAGLNFTQTETAAPVTDATETTPQTLAGKKFVLTGKFASFTRTEAQQLIEQAGGKVTASVSSKTNYVVVGDKGGSKQKKAEKLGITQINEDELKTMLS
>NC_019780.1|WP_156800880.1|1843251_1843365_-|AraC-family-transcriptional-regulator
MVGLVRQVALGKRQEARGKRQKAKGKRQKAKGKRQKC
>NC_019780.1|WP_015229470.1|1842058_1842991_-|tRNA-epoxyqueuosine(34)-reductase-QueG
MVLTSQEIKTKAKRLGFHLVGVAAAENDEQILAQKRLQNWLASGYNADMEWMNNPKRFALQKCLPNVKSVIAVALNYYTPEQQSEDPEKGKISRYAWGRDYHKVMTKKLKALACWLEEQEETIQARFYCDTGPVQDKFWAQQAGLGWIAKNGNLITREYGSWVFLGEVLTTLELTPDTPHTEHCGTCTRCLEACPTDAFPQPFVVNAKRCIAYQTIENRAAELPKEINLNNWVAGCDICQEVCPWNQRFAKETDCDDFQPRPENIAPNLIELAQLRDESWDQKTRGSALRRIKPAMWRRNARANLEKDRD
>NC_019780.1|WP_015229469.1|1841382_1842033_-|HAD-IA-family-hydrolase
MKTKIIIFDFDGTIADTQDAVIAVTNRLAPEFGFSPLEQKQVAHFRGLTAKEIIKQSGVALWKLPFLMQRVKQELRQEMKTVQPIDGIELALEALKKNQLQLGIITSNSEENASQFLRQYGLLHYFNFVESSFHLFGKDKVIKRLLRKKNIDPKMVAYVGDETRDLEAARKSGVKGIAVTWGFNTAEVLAKCQPNALIDHPSELLCVMDMTCKQRL
>NC_019780.1|WP_015229468.1|1840408_1841305_-|alpha/beta-hydrolase
MISSNLSSFIPPLAEKLTEETSTDLIRKIQQTPLETSLSSTPVKTTYVQGGEGELPILLLHGFDSSLMEFRRLFPKLSSVTETIALDFLGFGLTDRVPEIAITPDTIKTHLYAFWQQFIQRPMVLLGASMGGAVAIDFTLTYPETVAKLVLLDSAGFAGGPAMGKLMIPPLDRLAAGFLSNTKVRQKISENAYYDRTFASEDALICSMLHLTHPNWSKALISFTKSGGYNFLSQRIKEITQPSLILWGEQDKILGTKDAQRFKDTIADSQLVWIPESGHVPHLEKPNLTREAIENFLL
>NC_019780.1|WP_015229467.1|1839987_1840389_-|fasciclin-domain-containing-protein
MPTIVEIAVNNDAFQTLVQAVKAADLVETLNSEGPFTVFAPTDDAFAKLPPGTIQTLVQNPPQLARILTYHVLSGCYKKADLATSETVDSIEGSSIKIDCSDGFEVKNATVLTPDIEADNGIIHVIDNVLLMG
>NC_019780.1|WP_015229466.1|1839378_1839681_+|hypothetical-protein
MPKQAYSLQISFHYNNGEKESFLITETADENDPYPELRQRIQELISQKWCPLHTAEETIYINMTNVDTISVKPALGESDEELSFKEAQRITALTRSSKVL
>NC_019780.1|WP_015229465.1|1837962_1839369_+|aspartate-ammonia-lyase
MTQTNASDVRTEKDSMGERQIPTQVYYGIQTLRATENFPISGIKPLPVYIDACVLIKKAASIAHGKLNCIPTDVSNAIVQAADEILDGHLRNQFVVDIYQAGAGTSHHMNVNEVLANRALEILGDEKGNYQRVNPNDHVNYGQSTNDVIPTAIRIGALLALQRSLFPTLNDTINTLEEKAIEFQDIVKSGRTHLQDAVPVRLGETFRAWAQIFRDHNTRLITAAKDLQALGIGGSATGTGLNTHPQYRQEIVSLLSDAVGLPLTSAPHLMAAMQSMSPFVNVSGALRNLAQDCVKISHDLRLLDSGPKTGFREITLPPVQPGSSIMPGKYNPVIAEMTSMVSFQVMGYDQAIALASQAGQLELNVMMPLIAYNLIHSIELLGNTIEVLRDRCLKEIQAQPDRCQNYAEASLALVTALNPHIGYLNAASIAKESLATGKSLRELVLEKELMSEETLEKVLDLLKMSQLQ
>NC_019780.1|WP_015229475.1|1849395_1851078_+|glycerol-3-phosphate-dehydrogenase
MRDFSTIQNTDYDLIIIGGGVNGAAVARDAALRGLKPILLEKGDYASGTSSWSTRLIHGGLRYLEYFEFSLVRESLREREVLLRTAPHLVKPLMLTVPVYGDRSRPYWKISAGMLLYDIFSYDKTLPSHRMLPEQKFHQLFRYLDQEGLKGGAQYYDGQAVYAERLCLENIIAAEEAGATCLNYTEVTTLQREGDRITALNCEDKLTGETFTVNSTDRAVIINTSGPWVDQVCQRGENNQQTSPIGQKSKIGGTKGSHIVVPTFSGAPNTALYVEAKSDGRPFFIVPWLGMYLIGTTDLPFQGNLDQVKADNSEIDYLVKETNLIIPSAQLTRDDVKFTYSGVRPLPYSEGQKPGSVTRKHIIYDHRSEGVNNLISLIGGKLTTFRHVGEELVEIVGKKQKRNLPPCPTLKTPFPGAIIPSDPRVTETVKTYRDRVSLSTLNHLFTLYGARAIAVLQLIDESPDLAETITPTLPDIKAQIVYAARKEAAHSLVDILRRRTTIAMQANYGLDVLPIVSEVLGKHCDWEEEKLDRALKDYHNYMENNCIPDYQTAKSYVTSS
>NC_019780.1|WP_015229476.1|1851279_1851585_+|hypothetical-protein
MFTFVLICNGVICVFNCYLFWQLLKLRKTLRQLGNYLEKLEKKIPLLLKIAIFNLRQSEYKTLTVRKQYKLLQQKKTQILNLVQFLNWLYKKYRTSTLFKE
>NC_019780.1|WP_156800739.1|1851587_1851743_-|hypothetical-protein
MSIYCDYIRFRLELAVTDRCWVSLPFTQPTFSGRRSMERLYIGHWSLITIC
>NC_019780.1|WP_015229477.1|1852059_1853604_+|alanine:cation-symporter-family-protein
MMNLFPISSEQLQGLLVAATEKLSFFTQLNQAFSDFVAALKIIFFYPIFGFPIIVLWLIIGGVYFTFRMGLINIKGFSHALAVLSGKYQSGSDDDDQEGEVSPFQAASTALSATVGLGSIAGSAIAIQMGGPGAIVWMSIAGFLGMSSKFVECTLGQKYRQVKPDGSVAGGPMYYISGGLAELGFRPLGSVLGVLFAILCVLGTFGAGNMFQANQSYAALAGVLPFIADRSWFYGLIMALLVGVVIIGGISRIGVVTSRLVPIVVLFYMTGCLWIILSNWEVIPEAVAIIFKGAFSPTAIEGGIVGVIVQGFRRAAFSNGAGIGSAAIAHSATRNDEPVREGIVASIEPLVDTLIICNLTAISIVITGVYKGFAVGEASGIQLTAAAFGTVVSWFPTVLAIAVILFAFSNIVSWSYYGEQAWMYLFGEASTLLYKVIFIVFVFLGSVIELGVVLDFSDMMLIAMSVPNLLGCFLLAGKVGDDLQVYMEKLRLERAMAANTETDTATKEEEYTKK
>NC_019780.1|WP_015229478.1|1853607_1854540_+|RluA-family-pseudouridine-synthase
MDNWDKQQVTISATGKQRLDRALVEGFPDFSRSRLQKLIEQGNVQVNGIISKDKKQLVQAKDEIVLWIPPPQPLDVQPESIPLDILYEDEHLIIVNKPAGLVVHPAPGNETGTLVNALLAHCENLAGIGGIERPGIVHRLDKDTSGAIVVAKNDFSHQHLQKQIQDKTAKREYLGLVYGVPKGENGSIDLPIGRHPVDRKKMAVVERGGRNAITHWQLQERLGNYSLLAFQLETGRTHQIRVHCAAIGHPIVGDPVYSTAHSLGVNLSGQVLHARRLVLTHPVTGETLSAIAPLPTDFTKLITVLKHRNM
>NC_019780.1|WP_156800740.1|1854566_1854770_-|hypothetical-protein
MLAKLYYFVSLSPIAPITPITPIAPITPIAPLSPLSPIAPLSPLHFFKALRALKADWIKVLGLFRRH
>NC_019780.1|WP_015229480.1|1854791_1855241_+|pre-peptidase
MVSRFSIPLFFGTLLLLTVPFITPIKAQSILYNPLSLPMNRKINDRLSAKDIPTGEGGFARDYQVRLEKNDQVSIDLKSEDFDSIVLLIAEDGTTVAENDDGPDGTTNSLLFTRITESGRYIVRVRAFGKTGGGDFTLKITRLQPIQGD
>NC_019780.1|WP_015229481.1|1855256_1856054_+|5'/3'-nucleotidase-SurE
MTRLLISNDDGIFAMGIRTLANTLAEKGYDVIVVCPDRERSATGHGLTLHQPIRSNQVDNLFHPSVTAWSCSGTPSDCVKFALSAILETPPDFVLSGINHGSNLGTDVLYSGTVSAAMEGTIDGIPSMAISLASYTATDFRVAAQVTSQILDKLPSIPEGTLLNVNIPAVAREEIAGIMLTRQGLRRYIEQFEKRLDPRGKSYYWLAGEAIEDIPQPEAKHLPADVPTDVCAIRENYVTITPLEFDLTNAQSFIKLQEQGINQAI
>NC_019780.1|WP_015229482.1|1856650_1858483_-|AAA-family-ATPase
MEKFFKGFEDLLELAKTLEDKVEKGELKTDIRINSRPLTNIPSQGNIPRRNNPNQEGIGVENFNDSSTTVSDAEETEETPPSITLSQVGGLKSIIQELTELVGIPLKRPQWLEKLGLDATKGVLLVGPPGTGKTLTAKALAQSLGVNYIALVGSEIMSKYYGEAEARMRGMFEKAAKNAPCILFIDELDTIAPDRAKVEGEVEKRVVGQLLSLMDGFTNTPGVVILGATNRPNHLDPALRRPGRFDREVVFGVPDRGDRAAILRVLTAKMPLEETVDLDEIASLAVGFVGADLKALTQKAAYTVLRKTVSLENSDLDAITLPDEVKVTQSDFLTALKAVKPSVLRTVAVETPQVSWEEIGGLEEIKRTLREAVEGALLYPELYQQTRAKAPRGVLLWGEPGTGKTLLAKALASQAGANFISIKGAELLNRWVGASEEAVREVFSKARQVAPCVLFIDEIDTLAPARGSYQGDSGVSDRVVGQLLTEIDGMVDGGELLVVAATNRYQALDPALLRSGRFDLQLQVTRPDFNSRLAILRIHSIDRPLSDVDLEVWAAKTEGWNGADLELLSNQAALAAVRNATSQGITDPTQVKITAEDFQIAYDRLCRQRD
>NC_019780.1|WP_015229483.1|1858584_1859601_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MTQPHLTLTLGDPAGIGPEIVLKALADERLKDYCQITVIGSRSVLESTYQQLHSLTELVSPDQISIWDVPLSAKDDLKTGMGNAATGKASFAYLNTAIEQTIAGNFDGIVTSPIAKSCWQLAGHDYPGQTEVLAQATDRDQFGMLFVARSPHTGWTLRTLLATTHIPLQQVSQTLTPALMTQKLDLLIETLQENFDIKQPQIAIAGLNPHSGENGQFGTEEQDWLFSWLEQAQTTYPDVKLIGLVPPDTLWVKAGLAWFQDQSQSPIDAYLALYHDQGLIPVKLMAFDQAINTTIGLPFIRTSPDHGTAFDIAGKGIARCDSLKAAIELAAQLTGTKS

Crispr_ID: NC_019780_26

• CRISPR_ID: NC_019780_26
• CRISPR_location: 1946424-1946537
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_26

Consensus_repeat	Method
GCTTGGCTTCACCCAACCTACGGTTAGC	CRISPRCasFinder

spacers of NC_019780_26

>26.1|1946452|58|NC_019780|CRISPRCasFinder
GAAAATGTAGGTTGGGTGGAGTTTACGAAACCCAACCCCGATCGCTGTTGGGTTATGT

CRISPR arrays and Neighbor proteins around NC_019780_26

CRISPR arrays

The CRISPR arrays of NC_019780_26

>merge|NC_019780|26|1946424-1946537|CRISPRCasFinder
CTTTCGCTTCACCCAACCTACGGTTACCGAAAATGTAGGTTGGGTGGAGTTTACGAAACCCAACCCCGATCGCTGTTGGGTTATGTGCTTGGCTTCACCCAACCTACGGTTAGC

>NC_019780|26|26|1946424-1946537|CRISPRCasFinder
CTTTCGCTTCACCCAACCTACGGTTACC	GAAAATGTAGGTTGGGTGGAGTTTACGAAACCCAACCCCGATCGCTGTTGGGTTATGT
GCTTGGCTTCACCCAACCTACGGTTAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229557.1|1936593_1937397_+|FtsQ-type-POTRA-domain-containing-protein	unknown	unknown	gnl|CDD|224505
NC_019780.1|WP_015229563.1|1942791_1943181_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229567.1|1948328_1949417_+|mechanosensitive-ion-channel	unknown	unknown	gnl|CDD|366370
NC_019780.1|WP_015229573.1|1953839_1954601_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|316044
NC_019780.1|WP_015229574.1|1954738_1955950_+|coproporphyrinogen-III-oxidase	unknown	unknown	gnl|CDD|236007
NC_019780.1|WP_015229569.1|1950567_1950990_+|hypothetical-protein	unknown	unknown	gnl|CDD|377333
NC_019780.1|WP_015229556.1|1935162_1936458_-|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|272970
NC_019780.1|WP_015229571.1|1951664_1952027_-|DUF1818-family-protein	unknown	unknown	gnl|CDD|370153
NC_019780.1|WP_156800882.1|1943461_1945009_-|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl|CDD|234614
NC_019780.1|WP_015225143.1|1952223_1952313_-|cytochrome-b6-f-complex-subunit-PetN	unknown	unknown	gnl|CDD|367633
NC_019780.1|WP_015229560.1|1939668_1940157_+|hypothetical-protein	unknown	unknown	gnl|CDD|269835
NC_019780.1|WP_015229572.1|1952462_1953854_+|thioredoxin-disulfide-reductase	unknown	unknown	gnl|CDD|273540
NC_019780.1|WP_156800883.1|1949441_1950557_+|mechanosensitive-ion-channel	unknown	unknown	gnl|CDD|366370
NC_019780.1|WP_156800751.1|1945229_1946351_-|cobalt-precorrin-5B-(C(1))-methyltransferase	unknown	unknown	gnl|CDD|234615
NC_019780.1|WP_015229562.1|1941624_1942785_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229566.1|1946711_1948301_-|NhaP-type-Na+(K+)/H+-antiporter	unknown	unknown	gnl|CDD|223104
NC_019780.1|WP_041235419.1|1937588_1938848_+|cell-division-protein-FtsZ	unknown	unknown	gnl|CDD|236468
NC_019780.1|WP_015229570.1|1951038_1951458_-|EamA-family-transporter	unknown	unknown	gnl|CDD|225308
NC_019780.1|WP_015229561.1|1940328_1941612_+|histidine--tRNA-ligase	unknown	unknown	gnl|CDD|234586
NC_019780.1|WP_015229559.1|1938860_1939661_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|180561

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229557.1|1936593_1937397_+|FtsQ-type-POTRA-domain-containing-protein	gnl|CDD|224505	COG1589, FtsQ, Cell division septal protein [Cell envelope biogenesis, outer membrane].	1.61294e-09
NC_019780.1|WP_015225143.1|1952223_1952313_-|cytochrome-b6-f-complex-subunit-PetN	gnl|CDD|367633	pfam03742, PetN, PetN. PetN is a small hydrophobic protein, crucial for cytochrome b6-f complex assembly and/or stability.	1.3796e-06
NC_019780.1|WP_015229567.1|1948328_1949417_+|mechanosensitive-ion-channel	gnl|CDD|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	2.72866e-20
NC_019780.1|WP_015229573.1|1953839_1954601_-|MBL-fold-metallo-hydrolase	gnl|CDD|316044	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain. This family is part of the beta-lactamase superfamily and is related to pfam00753.	4.75576e-29
NC_019780.1|WP_015229574.1|1954738_1955950_+|coproporphyrinogen-III-oxidase	gnl|CDD|236007	PRK07379, PRK07379, coproporphyrinogen III oxidase; Provisional.	0
NC_019780.1|WP_015229569.1|1950567_1950990_+|hypothetical-protein	gnl|CDD|377333	pfam04375, HemX, HemX, putative uroporphyrinogen-III C-methyltransferase. This is a family of bacterial putative uroporphyrinogen-III C-methyltransferase proteins. It forms one of the members of a complex of proteins involved in the biogenesis of the inner membrane in E.coli. Uroporphorphyrin-III C-methyltransferase (HemX) is a single spanning inner membrane protein that regulates the activity of NAD(P)H:glutamyl-tRNA reductase (HemA) in the tetrapyrrole biosynthesis pathway.	0.00127766
NC_019780.1|WP_015229556.1|1935162_1936458_-|PDZ-domain-containing-protein	gnl|CDD|272970	TIGR00225, Tail-specific_protease, C-terminal peptidase (prc). A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database. [Protein fate, Degradation of proteins, peptides, and glycopeptides, Protein fate, Protein modification and repair].	1.02365e-140
NC_019780.1|WP_015229571.1|1951664_1952027_-|DUF1818-family-protein	gnl|CDD|370153	pfam08848, DUF1818, Domain of unknown function (DUF1818). This presumed domain is found in a small family of cyanobacterial protein. These proteins are functionally uncharacterized.	4.0155e-58
NC_019780.1|WP_156800882.1|1943461_1945009_-|glutamine-hydrolyzing-GMP-synthase	gnl|CDD|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NC_019780.1|WP_015229560.1|1939668_1940157_+|hypothetical-protein	gnl|CDD|269835	cd14687, bZIP_ATF2, Basic leucine zipper (bZIP) domain of Activating Transcription Factor-2 (ATF-2) and similar proteins: a DNA-binding and dimerization domain. ATF-2 is a sequence-specific DNA-binding protein that belongs to the Basic leucine zipper (bZIP) family of transcription factors. In response to stress, it activates a variety of genes including cyclin A, cyclin D, and c-Jun. ATF-2 also plays a role in the DNA damage response that is independent of its transcriptional activity. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.	0.00246708
NC_019780.1|WP_015229572.1|1952462_1953854_+|thioredoxin-disulfide-reductase	gnl|CDD|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	4.95889e-149
NC_019780.1|WP_041235419.1|1937588_1938848_+|cell-division-protein-FtsZ	gnl|CDD|236468	PRK09330, PRK09330, cell division protein FtsZ; Validated.	0
NC_019780.1|WP_156800751.1|1945229_1946351_-|cobalt-precorrin-5B-(C(1))-methyltransferase	gnl|CDD|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	8.30551e-133
NC_019780.1|WP_015229566.1|1946711_1948301_-|NhaP-type-Na+(K+)/H+-antiporter	gnl|CDD|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.50299e-42
NC_019780.1|WP_156800883.1|1949441_1950557_+|mechanosensitive-ion-channel	gnl|CDD|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.3196e-20
NC_019780.1|WP_015229570.1|1951038_1951458_-|EamA-family-transporter	gnl|CDD|225308	COG2510, COG2510, Predicted membrane protein [Function unknown].	1.48757e-09
NC_019780.1|WP_015229561.1|1940328_1941612_+|histidine--tRNA-ligase	gnl|CDD|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NC_019780.1|WP_015229559.1|1938860_1939661_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl|CDD|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	2.57913e-133

Protein sequences

>NC_019780.1|WP_156800751.1|1945229_1946351_-|cobalt-precorrin-5B-(C(1))-methyltransferase
MMIEPRSGYTLPVFATASAVAALRYLQKSEKLESVEIDLITPPQKVTIPVEQIALLDNGKALGITLSDPGDNLDITANTPIWALVSLEGRKPNRETVIIEGGEGVGKQLNRQGEAAIYRYAKQILIENLQGLIDDDQQVTVKIILPEGRRLAQRTSNEAFGVVEGLSLLGTTGISQPLTAPGQLTAFQEELGRKAREFSTLVFCVGENGLDLAQKQGINPEQLVKTANWLGPLLVAAGEQGVKSLVLFGYHGKLIKLAGGVFHTHHHLADARLEILTALGAKVGLSTDRLQQLLASETTEAGLEYLRGLSDGEEIVDRVYSAIARRIDENSQDYIRKHAEKAVTVGSVLFDRNRNIITMSSSARQFLPSLKRG
>NC_019780.1|WP_156800882.1|1943461_1945009_-|glutamine-hydrolyzing-GMP-synthase
MIAILDFGSQYSELIARRIRETQVYSEVLPYRTTAEQLKKLSPHGIILSGGPSSVYDEGAPTVDPKIWELGIPVIGVCYGMQVMVQQLGGVVKRADRAEYGKASLHIDEEETLFPGVEDGATMWMSHGDSCLKLPTGFEVLAHTENTPCAAIAHPEKKYYGVQFHPEVVHSVGGAVLIRNFVYKICECEPTWTPEAFVEEAVREVRGKVGDKRVLLALSGGVDSSTLAFLLHKAIGDQLVCMFIDQGFMRKGEPERLIEIFKDRFHIPVEYVNARDRFLAQLEGVSDPEEKRRRIGHEFIQVFEEKSQELGPFDYLAQGTLYPDVIESADTNVDPKTGERVAVKIKSHHNVGGLPKDLRFKLVEPLRKLFKDEVRKVGRSLDLPEEIIQRHPFPGPGLGIRIIGEVTAERLNILRDADFVVRDEIKKQNCYQDFWQAFAVLLPIRSVGVMGDKRTYAHPVVLRLISSEDGMTADWSRVPYDLLETISNRMVNEVKGVNRVVYDVTSKPPGTIEWE
>NC_019780.1|WP_015229563.1|1942791_1943181_+|hypothetical-protein
MDNWTKEFLAFCDSVNQEIESFFAEMEELPQLINEAIVEMEETLTEELELFSQDCEELFTFLVTEIDETEEEESDSEFVVTSKVYPDQNTHPACQGCRHYHGYVYGGNLFVCGMHPYGWDDENCPDWEQ
>NC_019780.1|WP_015229562.1|1941624_1942785_+|hypothetical-protein
MENWEFFLQKIGEENWLRIETAAPEFPTGRYVIAARAAHHAKESIEVEVREQDSKTRSQQNSCQLDPEGFGILLREIELTPGVWEIQCRSDLLSELMGESWEITLTLRITLDLEKSPLRLNPEESSGEDLNQLRSRLIDDADQFLQEVVTELFPSSSTFPAYSPEKVKDYSLQIDQDILITQTNKPIILSGKISTQKQPPHPKLRLHLTLRDPRTGNLVAELFPRLRDQPFPLTFCYSLTVPSPCDSYLLQGEITLLESNPEQPETILDSQPFTVSANWEKLQPFLVGVITTATVSHPPAPLSPLSSDQRELSNESSQRWRGVIPPKLKKKGDNKKKSPPTLPKLPNSTKGKPKEYVWSKPDQDTETASEWELLPELAIISTDETQ
>NC_019780.1|WP_015229561.1|1940328_1941612_+|histidine--tRNA-ligase
MGEIKALRGTRDILPEEVNYWQQVETVAKEILTKAAYTEIRPPIFEQTALFERGIGEATDVVSKEMYTFVDRGDRSCTLRPEGTAGVVRAFIEHGLHAQGVQRLWYTGPMFRYERPQAGRQRQFHQIGLELIGSPSPVADVETIALATDILETLGLKHLSLQLNSVGNNEDRQRYREALVAYLTPYKDQLDSDSQYRLDRNPLRILDSKDEQTQAILENAPRLLDHLDADSQAHFEAVKRQLTALGIDYTINTNLVRGLDYYTHTAFEIQSADLGAQATVCGGGRYDGLIGQLGGNETPAMGWAIGMERLILLLKQLKPVPKPELDIYLVSRGDRATAQGLKIAQTLRHQGLRVELDLSGSQFKKQFKRADRSGAIACLIIGDEEVEQGTVNLKWMATQAQSVWQQSELIANGDQLRQQIWEAKHRE
>NC_019780.1|WP_015229560.1|1939668_1940157_+|hypothetical-protein
MTSNYKFQGINAPANKNTPTVPMSVYRELAGELQTYKNQINDLKEENRQLNQENQSLRSEIRTLMQAVKKLENTLNYWEEKPHYPSWKTPVDNQESETNYEFPELHQEKWLSHQEETNHKITKDEENSEINGWLVAAIIVMIVFTFSGIGFMVARPLLNSDQ
>NC_019780.1|WP_015229559.1|1938860_1939661_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MNCPTALTIAGSDSGGGAGIQADLRTFALNCVHGMSAITCVTAQNTIGVQRVDALPPEAVSAQIESVVSDMGVQGVKTGMMLNSGIIQGVKSAIEAYQLEERLVVDPVMVSRSGAQLLDDTAIEQLKQLIPLACLVTPNRYEAQLLSGIEIKTIDDMKRAAETIYTYGVKAVLVKGGAMLGENRGVDVWFDGETFDLLKTKSVETKNNHGTGCTLSASIAAKIALGKDLKTAVVESKNYVTRALESALDLGEGNGPLGHFFPLLEK
>NC_019780.1|WP_041235419.1|1937588_1938848_+|cell-division-protein-FtsZ
MKTEKQKSPKFDASLSMSEEDNQSNGLDNFNLDDLLNSSHNDREKSTREKARSNNIVPGNVAKIKVIGVGGGGCNAVNRMIASDVTGVEFWAVNTDAQALSRVTAPNSLQVGEKLTRGLGAGGNPSIGQKAAEESRDEISNALEETDLVFITAGMGGGTGTGAAPIVAEVAKEMGCLTVGVVTRPFTFEGRRRTSQGEEGIAALQTRVDTLIIIPNDKLLSVIDERTPVQDAFRVADDILRQGVQGISDIITIPGLVNVDFADVRAVMADAGSALMGIGTASGKSRAAEAATGAISSPLLESSIQGAKGVVFNITGGSDLTLHEVNTAAETIYEGVDPNANIIFGAVIDDGKMEGEIRITVIATGFSGEETSKPTKKEAKTTATKKPTPLSQKERKENTDQGDKKELDIPEFLQRRRNR
>NC_019780.1|WP_015229557.1|1936593_1937397_+|FtsQ-type-POTRA-domain-containing-protein
MSFSYSPVNEIQDQRQALRRQKQLEKMQGVWRSMLTLSFATGLIWSSFQPQWTINQLEQVEIQGNEYLSAEALKNIVKETTQQSILTLSPDRIEEILQNQAPIAEVTVARDLYPPQVTIAIEERDPVALTIPNSAAINPLAEGYLDEKGNWMSKENYQSSETFPTVTLKVIGYRPQYRLQWAQIYPQLQTHPLEITTVNWQNPANLILETEIGEVHLGGNLESLPKQLEVLAQFPTPLETPSGESIDHINLKNPDYILIEKPSEIKN
>NC_019780.1|WP_015229556.1|1935162_1936458_-|PDZ-domain-containing-protein
MVMTKRGLVLGATAAMLTTVAVTGAGLHLSQSQAFFRESPKELVDEVWQIINQQYVDGTFNQVDWQAVRQEYLDRSYEDKQEAYQAINQMLDQLDDPYTRFMDPEAFKNLQIDTSGELTGVGIQIALDEETDYIRVVSPIEETPAYEAGILARDLIVAIDGKSTKGMELNDAVNLIRGKPGSNVTLTIQRREQEFDYEITRARIEVHPVKARLHETRQGGEIGYIRLNQFNSNAAQEMRTAIQEFEEKSVQGYILDLRSNPGGLLQASIQISRMWIDEGKIVSTVNRQGEVDAQRAKGNALTDQPLVVLVDGGSASASEILSGALQDQERAVIVGTQTFGKGLVQSVRGLGDGSGLAVTVAKYLTPDGRDINEEGIAPDVVSEISEAEQKALQRDRTQIGTLADPQFSEALSVLKQEIAKQNNSSQVGVSQ
>NC_019780.1|WP_015229566.1|1946711_1948301_-|NhaP-type-Na+(K+)/H+-antiporter
MLTSAILILLLGLIGGEVFRRIGAPPLLGMIAVGIILGKEVADLLNPIVITLADDLRMAAVMVILMRAGLGLDREKLLQQGSVALRLGFLPALAEMSAIALFSSLLFDFNLITGLLLGCVIAPESPAVIVPGMLRLKSRGWGVAKGIPDVILTGSALSDVLILLIFSLLLNFFQQGVNTDSLTQLPLQVILQIVFGVAIGFAVAWLITVILAKLKLAQNPVHEIIIVGSIALGLIILAETFPYFSGYLATMALGFFLIEFDAPLARRLRVEFNHLWIVAEIVLFVLLGVSLELKVLEAVLLPGLILLILGLLLGRSIGWYFSTIGSNWNWRERLFLLPGNSAKATVQAAIGAIPLSLGIEGGETILALAVLSILVTAPIGAWAIPTFAPKLLEQGEVDPTKVSSTEKTRLLAAIDTSLLATEVLKKTGELARKMNAEVIVLHVISHLDEEKNTELETLTQQHLADISYRFITSNGVVGTEIIGIAQFYEVSDIIMGKRGHQPLEKVLLGSTSQTVLENSPIPVILVEEK
>NC_019780.1|WP_015229567.1|1948328_1949417_+|mechanosensitive-ion-channel
MNLINPLQLSVVFFLALVLFLSCLLIAGLSYLPISQVFQAFVKRFDLKDIYRNTSYSLKLWLVLTILIIIIDAIFLRLPSPTWLEWLESPLGLIVAIDVCLFTFKALDKLFENYLLGVALEDQTKINSELIALGQYLSKVTTVLVLIFCFAQTHQINLIGLLASLGIAGATIAFASQKIIEEILWSIVLLIDRPFSVDDYIHLQDRTMGRVESIGWRSTKIRLSGKNTLAVIPNSNLVKENIENLSRAKRVISMITLTFFRILSENEKALIQEFILESTADILGIDNELTQVSFKEIAARSGEQCVRAEVIFFILGTNDASMELRRGLLEIARDNIVQRLQAYGIAFNCEQTTVDVPQKMTI
>NC_019780.1|WP_156800883.1|1949441_1950557_+|mechanosensitive-ion-channel
MQIEWEILQEVLVLMLRLGLFSLAAIISPFVGRFFPQFIWRFLQFIQRYVSIDAKHTYDQFVKSFQNLIAISGTFLFLALALNLLAQYEEIYQFLGFFIYFCLSVTLAWIALKISRQLIRRTVISLVQRWFGEVSEVVLIFESLIYVVIIILAGIIFAIGLRLNITAIVASLGISGVAIAFGAQQTLSRLFGTLEIYLDRPYRPGEYIRINFNPYDEDAYGRIESIGLRSTKIRLVARNTITIVPNSLMADKRIENVSRGKKIVAMLCLDFLRVLDSGERALVKQVVQEASEVFWGFTKASIHVQYCASDQQAGTRARIIFFISSVDESSLGLRKRLLELANSAIAHKLAGYNLKFTTPEPVVYIDSPMSL
>NC_019780.1|WP_015229569.1|1950567_1950990_+|hypothetical-protein
MNPESFSDYQPNLSQSQSLSQTVEELEVKLERLQGLAQTLIGGLMVAILITIGVSGWFAYRLILQEQQARRQAQEFQQTEVELQEKLDNLEQKFSAQQQQINQLREEIPDDLETVTNTVNSNQQQIEVLQDKIQRSNAEP
>NC_019780.1|WP_015229570.1|1951038_1951458_-|EamA-family-transporter
MSWLTLSLVCLFVYGLWGFFSKFVSAELNAPSLLIYSLLGSSLGIPLYIFSYRESFSFQWQNGWTYLGILVGVFTSLGAFLFFNAIAQGEASKVVVITSLYPIVTTMLAVFFLNEAVSLSKVMGILLCLVGIIVLSSSK
>NC_019780.1|WP_015229571.1|1951664_1952027_-|DUF1818-family-protein
MDRILKKGEGWRLGWNPYATTYKGLVGNEDWAIELSETEFKDFCRLLLQLATTMEQMAQELVSEERIAGEAESEVVWLEVEGYPQAFSLRMILQTGRCGEGNWSVTGTQNLIEAVQNFFP
>NC_019780.1|WP_015225143.1|1952223_1952313_-|cytochrome-b6-f-complex-subunit-PetN
MDILTLGWVAFLALFTWSITMVVWARNGF
>NC_019780.1|WP_015229572.1|1952462_1953854_+|thioredoxin-disulfide-reductase
MAQQTVENLVIIGSGPAGYTAGIYAARANLKPVMFEGFQAGGAPGGQLMTTSDVENYPGFPDGITGPKLMQDMKAQAQRWGTEIYTEDVIYADLKQRPFTIRSQEREIKAHSVIIATGANAKRLNLPNEDKFWNLGISACAICDGANPMFKGNDVVVVGGGDSAAEEAVYVTKYCDRVHLLVRREQLRASKTLQDRVLNHPKITVHWNTEAVDVYGQEGGFLEGVTIVNNQTGEQSNLPARGLFYAIGHTPNTQLFKGQLELDDVGYIITKSGSVETNLEGVYAAGDVQDHEFRQAVTAAGTGCQAAMLAERWLSANELATEYHQDGQTPEKQDSSEEEKPAADTEATFDINQTRHYGGYALRKLFHESDRVLIVKYVGPNCGLCATLKPILDGVIDEYADQVHFVEIDIADEPDIAENAMVTGTPTVQFFRNQEIVDQLRGVKQKSEYRQRIEQYLSELVGA
>NC_019780.1|WP_015229573.1|1953839_1954601_-|MBL-fold-metallo-hydrolase
MELTYLGSNSWLWQWEDLNILVDPWLVDDLVFGNLPWLFRGTRRENPPTLPDRIDLILLSQGLEDHAHKPTLKSLDPNIPVVGSPSAAKVATEIGFTTVTSLSHGESHTLQDKIEIRALPGAPVGIEKENAYLLTAAPQQRLYYEPHGFPPESVKDYAPVDVVINPIVNLELPLAGAIINGKESAIKLAQWLKPKTILATASGGDIDYQGVLLSLLKTGGGVEEVKASLKDSHLDTEVIEPQQGQQISLLSAN
>NC_019780.1|WP_015229574.1|1954738_1955950_+|coproporphyrinogen-III-oxidase
MTSQTTAAYIHIPFCRRRCYYCDFPVSVVGDGGGTLDRARLMRQYVQVLCEEIRLTAAWFPSASLNTVFFGGGTPSLLPVAELDKILTTLDQQFSIAKDAEISIEIDPGTFDLEQLESYQRLGINRYSLGVQSFDNDLLLQMGRTHRETDIYRAIEQFQQIGIDNFSLDLISGLPHQTLFQWETTLEKAIALSPTHLSCYDLIVESGTAFQRQADSGKLPLPPDETSAEMYRLTQQHLTRVGYIHYEISNYAFLGYQCHHNCTYWQNLSYYGFGMGAASFLAGKRFTRPRTRREYSQWVETLNQENNDLTSTSEVDQQEQLLDTLMLGLRLQKGIDLSAIERQYGSECVKKITSVLSPYLDRNWVNLGKLDDHNSWENLTLSDPEGFLFSNQILATLFRAFLD

Crispr_ID: NC_019780_27

• CRISPR_ID: NC_019780_27
• CRISPR_location: 2010552-2010724
• CRISPR_type: TypeV
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_27

Consensus_repeat	Method
AATAACGAATAACGAATAACGAATATTGGTGTTGGGTTTCGCTTCGCTCCACCCA	CRISPRCasFinder

spacers of NC_019780_27

>27.1|2010607|63|NC_019780|CRISPRCasFinder
CCACCCATTGCAGTGACCAATGTAGAGACGTTCCATGGAACGTCTCCCAGTAATCAGTGAACA

CRISPR arrays and Neighbor proteins around NC_019780_27

CRISPR arrays

The CRISPR arrays of NC_019780_27

>merge|NC_019780|27|2010552-2010724|CRISPRCasFinder
AATAACGAATAACGAATAACGAATAACGAATATTGGTGTTGGGTTTCGCTTCGCTCCACCCATTGCAGTGACCAATGTAGAGACGTTCCATGGAACGTCTCCCAGTAATCAGTGAACAAATAACAAATAACGAATAACGAATATTGGTGTTGGGTTTCGCTTCGCTCCACCCA

>NC_019780|27|27|2010552-2010724|CRISPRCasFinder
AATAACGAATAACGAATAACGAATAACGAATATTGGTGTTGGGTTTCGCTTCGCT	CCACCCATTGCAGTGACCAATGTAGAGACGTTCCATGGAACGTCTCCCAGTAATCAGTGAACA
AATAACAAATAACGAATAACGAATATTGGTGTTGGGTTTCGCTTCGCTCCACCCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229619.1|2001474_2002530_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	unknown	unknown	gnl|CDD|237458
NC_019780.1|WP_015229620.1|2002699_2003440_+|heme-oxygenase-(biliverdin-producing)	unknown	unknown	gnl|CDD|227685
NC_019780.1|WP_015229633.1|2016099_2016498_-|hypothetical-protein	unknown	unknown	gnl|CDD|226447
NC_019780.1|WP_015229635.1|2018409_2019141_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NC_019780.1|WP_015229621.1|2003619_2005011_+|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl|CDD|236430
NC_019780.1|WP_041235429.1|2011237_2012983_+|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl|CDD|223733
NC_019780.1|WP_015229631.1|2014041_2015016_-|prohibitin-family-protein	unknown	unknown	gnl|CDD|259799
NC_019780.1|WP_015229618.1|2000619_2000769_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229623.1|2006389_2007142_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NC_019780.1|WP_015229630.1|2013041_2013821_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl|CDD|223704
NC_019780.1|WP_041235431.1|2017310_2018153_-|dihydropteroate-synthase	unknown	unknown	gnl|CDD|238380
NC_019780.1|WP_041235428.1|2009732_2010386_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl|CDD|234649
NC_019780.1|WP_041235430.1|2016840_2017152_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229632.1|2015063_2016029_-|prohibitin-family-protein	unknown	unknown	gnl|CDD|259799
NC_019780.1|WP_015229628.1|2010824_2011169_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800755.1|2017138_2017309_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229624.1|2007445_2008780_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|274368
NC_019780.1|WP_015229625.1|2009035_2009707_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|223776
NC_019780.1|WP_083874404.1|2000856_2001363_+|HNH-endonuclease	unknown	unknown	gnl|CDD|377857
NC_019780.1|WP_015229622.1|2005447_2006254_-|prepilin-peptidase	unknown	unknown	gnl|CDD|377700

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229619.1|2001474_2002530_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase	gnl|CDD|237458	PRK13654, PRK13654, magnesium-protoporphyrin IX monomethyl ester cyclase; Provisional.	0
NC_019780.1|WP_015229620.1|2002699_2003440_+|heme-oxygenase-(biliverdin-producing)	gnl|CDD|227685	COG5398, COG5398, Heme oxygenase [Inorganic ion transport and metabolism].	2.11228e-92
NC_019780.1|WP_015229633.1|2016099_2016498_-|hypothetical-protein	gnl|CDD|226447	COG3937, COG3937, Uncharacterized conserved protein [Function unknown].	2.82035e-10
NC_019780.1|WP_015229635.1|2018409_2019141_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	1.38463e-136
NC_019780.1|WP_015229621.1|2003619_2005011_+|oxygen-independent-coproporphyrinogen-III-oxidase	gnl|CDD|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NC_019780.1|WP_041235429.1|2011237_2012983_+|AarF/ABC1/UbiB-kinase-family-protein	gnl|CDD|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	0
NC_019780.1|WP_015229624.1|2007445_2008780_+|PAS-domain-containing-protein	gnl|CDD|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	1.94282e-44
NC_019780.1|WP_015229623.1|2006389_2007142_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.71422e-96
NC_019780.1|WP_015229630.1|2013041_2013821_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl|CDD|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.48413e-86
NC_019780.1|WP_041235431.1|2017310_2018153_-|dihydropteroate-synthase	gnl|CDD|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	3.63433e-132
NC_019780.1|WP_041235428.1|2009732_2010386_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl|CDD|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.42573e-56
NC_019780.1|WP_015229632.1|2015063_2016029_-|prohibitin-family-protein	gnl|CDD|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.6704e-57
NC_019780.1|WP_015229631.1|2014041_2015016_-|prohibitin-family-protein	gnl|CDD|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	3.70168e-57
NC_019780.1|WP_015229625.1|2009035_2009707_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|223776	COG0704, PhoU, Phosphate uptake regulator [Inorganic ion transport and metabolism].	8.4886e-53
NC_019780.1|WP_083874404.1|2000856_2001363_+|HNH-endonuclease	gnl|CDD|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	1.59567e-20
NC_019780.1|WP_015229622.1|2005447_2006254_-|prepilin-peptidase	gnl|CDD|377700	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain. This family is found at the N-terminus of the pre-pilin peptidases (pfam01478). It's function has not been specifically determined; however some of the family have been characterized as bifunctional, and this domain may contain the N-methylation activity (EC:2.1.1.-). It consists of an intracellular region between a pair of transmembrane. This region contains an invariant proline and two almost fully conserved disulphide bridges - hence the name DiS-P-DiS. The cysteines have been shown to be essential to the overall function of the enzyme in, but their role was incorrectly ascribed.	1.8789e-46

Protein sequences

>NC_019780.1|WP_041235428.1|2009732_2010386_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MPRVRVRQHVNPLSQKYQTPITPPVWEKIYSDLNQPFFLDIGAARGRFLLEMAQLQPDYNFLGLEIREPLVTEANRIRDELGLTNLHYLFCHVNPSLETVLASLPKNALNLVTIQFPDPWFKQRHGKRRIVQPQLVETLANYLNPNSWQQRGGVFLQSDVRFVIEEMSRHFAAHPAFFRETSTWLSENPFPVATEREITTLEQNQPVYRTWFDRATP
>NC_019780.1|WP_015229625.1|2009035_2009707_+|phosphate-signaling-complex-protein-PhoU
MNYWSSPHYNSRNSYFDRSLKRVEQDVLRMGALVEQSFRLSHSALFRQNLEAAKQINDLDEQIDQYYRQIELDCAKLMTLQAPVATDLRVISAFMQLVRDLERIGDYAEDLAEFAIKLFPYPPHPCLPEVAAMSHQTQMMLAASLVALADLDATAGKRVKEMDDIVDDAYDRIYNILAKKSDVQGVVEPILLLGLSIRHLERMADHATNIGQRVAYIVTGDRS
>NC_019780.1|WP_015229624.1|2007445_2008780_+|PAS-domain-containing-protein
MTLSIILTFFAGLAIGLMIAYRQKRAWKKDLNQLLKELFGNTQETISSSLSNRLRREILLLKSNSSYLQNQLNIWQKLMENAPIGYLEVDEENQLIWCNKQARNLLQIDRWQPHQVRLLLELVRSYELDQLIEETRNTQESKVQEWVFHSTDFPTDTETHSSTSIALKGSSYPLPESKVGVFLENQQPLMELSQQNQRLFSDLTHELRTPLTSIRLVAETLQPRLQPPENRWVNQMLQEANRLIRLIEDWLEISQLEKKPQQNLRKEQFAIAPLIYSAWETLKPLSEQKQLKLNYESEQSLLITADYSRLTQVFLNLFDNAIKYSSQNSNIWVKVVFLPSHRIHKAEDWVQISVIDQGQGLSKTDILRVFDRLYRGDEGAEERKKNNVNQTDANSSFQSSGTGLGLSITRQIVLAHCGRIQAKNHPETGGAWLQIELPNVVLDQ
>NC_019780.1|WP_015229623.1|2006389_2007142_+|response-regulator-transcription-factor
MLSLDIPKTSPSPEFTQTAHILVVEDEDLIREMVVLSLQEEGYEVSIATDGRTASDLLQATEPNSSDFPYDLIILDLMLPQINGLDICRWLRYQGNIIPVLILSAKASETDRVLGLEVGADDYITKPFSMPEFIARCRALLRRQRFSSFPQTPVLQYQDITLFPQECRVTVRGDDISLSPKEFRLLELFISSPRRVWSREQLIEQIWGPDFLGDTKTVDVHIRWLREKLEPDPSQPTHIVTVRGFGYRFG
>NC_019780.1|WP_015229622.1|2005447_2006254_-|prepilin-peptidase
MENYIVSSFIFVFGAAIGSFLNVVIYRLPANLSLLYPPSRCPICGHRLGKTENVPILGWLWLRGKCRHCQTPISPRYPIIETITALLFVAVYLQFGFSFATVGYWILLSWLLVLSLIDYDTMTLPNSLTQSGLILGLGYQVLSQNSFNINQVSQQLMTGIIGAVLGIWLFDIITIVASGILGQTAMGGGDAKLAAMLGAWLGWKLLLVGCFLAFAVGAFIGGGAIALGILSRRDPMPFGPFLALGGAIAVFYGERLLSAYVNLFFPVI
>NC_019780.1|WP_015229621.1|2003619_2005011_+|oxygen-independent-coproporphyrinogen-III-oxidase
MTIKTVEFDTELIKKYDRALPRYTSYPPATELKETFDQNAFTKALKVGNKNQTPVSLYCHIPFCETPCYFCGCNTLITQQKKFADPYLDYVFKNIDQVASLVDSQRKVNQLHWGGGTPNYLNLEQVEKLWTKITDSFSLENKAEISLEINPKSVDKNYLLFLRNLGFNRISFGIQDFNPQVQKAINRIQTENQLFQVMEWIRDVGFESVNVDLVYGLPYQTLETFQETIEKTIKLNPDRIAVFSFAYVPWLKAVQKRLPEKALPNREEKLKILQMSIEKLTDQGYVFIGMDHFAKPNDELAIAQRKGELHRNFQGYTTKPESDLLSFGMTGISMLHDVYIQNQKRLKDYYQNLDANYFPIQKGVKLKEEDHLRQAIILELMCQFHFSPDCLKDKYNIEFQGKFSEYFAPELAQLNELAKDGLLSIEGETIEVTSAGRLLIRNIASVFDRYLKQRQQKTFSQSI
>NC_019780.1|WP_015229620.1|2002699_2003440_+|heme-oxygenase-(biliverdin-producing)
MSYLAEQLREGTKQSHTASENTAFMKCFLKGVMEKKPFSELIADLYFVYATLEAEMFRHREHSVVGKIYFPELERKQKLEEDLAFYFGENWQEKIVASPAGKVYVDRIKKVSQTQPECLVAHAYVRYLGDLSGGQGLRKIARSAMDLPPDQGTGLHEFDALPNAEAKREFKEKYRNALNSIVVDEETQKAIIEEANYVFKLNRDVFHELEGEIKKSIGDRAFDLLTRQDQPGSTEKAVNSNQLVAN
>NC_019780.1|WP_015229619.1|2001474_2002530_-|magnesium-protoporphyrin-IX-monomethyl-ester-(oxidative)-cyclase
MSTTVSQPEIKTSMKETLLTPRFYTTDFDAMAEMDLSSQQAELEAMVAEMKADYNCHHFVRTEAFEQSWEHIDGKKREAFLEFLERSCTSEFSGFLLFKEISRKLKGRNQLLADIFHYMARDEARHAGFLNKAMKDFNVTLDLGYLTKHRTYTFFKPEWVIYAVYLSEKIGYWRYITIYRHLEQHPEYEFYPLFQMFESWCQDENRHGDIFKALLRSQPKLWQTWQGRLWARFFLLTVFATHTLTVHEREDFYESLGLDATEFDRHITRKTNETAGRAFPVMLNVDHPEFFQRLETCADRNRKLNEIDNSNAPKWLKQLRKLPLITAIFVDLVRLYFIKPVDAVSEWEAVY
>NC_019780.1|WP_083874404.1|2000856_2001363_+|HNH-endonuclease
MFKFKILEKTASQRFPSDQEFENALIYKEIYRIQSKNKNFLLESLENYNSSYLVNIDELTIEHIMPQKLTKGWKESLGDNWQEIHKKYLHTLGNLSLTAKNRELSNNSWEEKQAIDYKESKLKLSFKLDRGSKWGEKEILDRAKRLAQDAMSIWKYPTTKYEKIKPDE
>NC_019780.1|WP_015229618.1|2000619_2000769_-|hypothetical-protein
MNQQSVLGTSLVFSHSLTNVAANAVGVAKTGTAIGSLHRSRVLVLPKGF
>NC_019780.1|WP_015229628.1|2010824_2011169_+|hypothetical-protein
MSNPALHAFYVGRAFAEVLGERLEDTVTNSLSELGQLEAKQREAMQEFVEEVMARAEQSSGDEQPSARETQSKSASSRPQTAKRSPEDVQAMVDELRASIASLRTELNAYKSQS
>NC_019780.1|WP_041235429.1|2011237_2012983_+|AarF/ABC1/UbiB-kinase-family-protein
MSALSEKSNQPINAKVTRISSSSLEAGKKAYRWNRENYSRNRRRFDIWFFVLTLLFKLWLEGKKWSYIGGYTEEKKKARRQARAVWIRESLLELGPTFIKVGQLFSTRADIFPSEYVEELSKLQDRVPAFDYEQVAAIVKEDLGKSVEQLFASFDPTPLAAASLGQVHKAQLHSGETVVVKVQRPGLKKLFTIDLAILKWIARYFQNHPRWGKGRDWIGIYDECCRILWEEADYLNEGRNADTFRRNFQTYERVRVPRVYWRYTSLRVLTLEFVPGIKVSHHEALDAAGVDRSIIARLGAETYLQQLLYDGFFHADPHPGNLAVSPEGQLIFYDFGMMGRIQGNVKDNLMETLFGIAEKSGDRVLNSLVKLGALAPVEDTSAVRRSIQYMLDNFMDEPFEEQSVAEISDDLYEIAYNNPFRFPATFTFVMRAFSTLEGVGKTLDPEFNFMAVAQPYAMELMNSNGYDNNKTLFDEIGRQAASMSSTALGLPRRLEETIDKLEKGDLRLRVRSIESDRILRRMSGIQLGTNYSLLIAAFTISATILVVNELITLAVIMALAASASAFAWIRLLKRLDRWDRM
>NC_019780.1|WP_015229630.1|2013041_2013821_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MKRRFNGRTDTGVMRAVNQDCLYYDPRGRFFIVADGMGGHAGGQEASKIATQVISDYLEEHWESDLNSENLLHQAVEEANEKIIGDQQTHPERAEMGTTVVAVVFREDKSWCVHVGDSRLYLWRDNILTPFTEDHTWVAWALKSGTISPEEAGVHPWRHVLSQCLGRKELYSIDTDIINVQPGDRLLLCSDGLTGEVSEEEIRMYLQEAETCEEAVTELIETAKENGGSDNVTVIVIEEGETEESFRNLDEADTLSSEY
>NC_019780.1|WP_015229631.1|2014041_2015016_-|prohibitin-family-protein
MNKPNSQSITAIIGGVIAALLLIIGFNSYTVINPGEAGVLSILGKAQEGALLEGIHFKPPIISKVDVYDVTVQKYEVPAQSATKDLQDLNASFAINFRLDPVQVVDIRRKQGTLSNVVAKVISPQTQESFKVAAARKTAEEAITRRDELKQDFDIALNNRLEKYGIIVLDTSVVDLNFTKAFAQAVEDKQIAEQSAQRAVYIAREAEQKAQADINRAKGRAEAQRLLADTLRAQGGSLVLQKEAIEAWRQGGSQMPNVLVMGGENESSVPFLFNLGDLADVDGDRPSPQDASPLDEPSPFESEQQENEDSSSSLNLPPGYGGLN
>NC_019780.1|WP_015229632.1|2015063_2016029_-|prohibitin-family-protein
MNKQTNQSLTAIIGGIIAALLLLVGFNSYVVINPGEAGVLSILGKAQEDALLEGIHYKIPFISKVDVYDVTVQKFEVPAQSATKDLQDLKASFAINFRLDPVQVVDIRRKQGTLSNVVSKVIAPQTQESFKVAAARKTAEEAITKRDELKEDFDIALNNRLDKYGILVLDTSVIDLNFTKEFAQAVEDKQIAEQRAQRAVYIAREAEQEAQADINRAKGKAEAQRLLAETLRAQGGSLVLQKEAIEAWRQGGSQMPNVLILGGENKSSIPFLFNLGDLADIDEERPSPEEASPLDEPSPFETEEDESSSLDLPPSYGNLQE
>NC_019780.1|WP_015229633.1|2016099_2016498_-|hypothetical-protein
MSNQFGLGDILQKAFYFGVGLADYAQEQAREKLKELRTQSQKLADELVKRGEMNSEEARQFVEELISEAQRGQTESSNQSSEKGEPRRIEIIEDEPESDKQTTSKQEGDENIDTLREQVEALREELKRLHKK
>NC_019780.1|WP_041235430.1|2016840_2017152_+|hypothetical-protein
MLKKSIGWFSKARGKRQEASCLRQKASCLRQVALGKRQDGEDGEDGEDGEDGEDGEEKLSPLSPISPISPISPISPLSPLHFFEGLRALKPHWVKVSVLFRKP
>NC_019780.1|WP_156800755.1|2017138_2017309_-|hypothetical-protein
MTTSRVARSSFAQSISRLGEEDETQHQTSTLEKRRLGEEDETQHQSVISHGLSRVS
>NC_019780.1|WP_041235431.1|2017310_2018153_-|dihydropteroate-synthase
MNNKHLMIRDQDFVWGKRTYLMGVLNITPDSFSDGGDYNNLEEAFDRAAKLVNAGADILDVGGQSTRPGAKSISPEAELERVIPVIKRIRKHLNVPISVDTTRATIAEQAIRSGADLVNDISGGTFDPEMLPTVAELEIPIVLMHIRGTPETMQQLTDYDDLVGEILTVLEERIAAAEQAGIARSRLIIDPGIGFGKTYEQNLELLRQLHQFKSLGVPILVGTSRKSFIGKILDQSDPKQRVWGTASTCCASIAQGADILRVHDLPEMWDVSRVADAIWR
>NC_019780.1|WP_015229635.1|2018409_2019141_-|triose-phosphate-isomerase
MRRVVIAGNWKMHKTQAESLEFLQSFLPLLENTAEDREVILCAPFTDLSVMSKNLHGTRVRLGSQNVHWEESGAFTGEIAPSMLTEVGVTYAVVGHSERRQYFGETDETVNFRARAAQKAGLKPILCVGESKQQRDAGETEAVITQQLKADLVGIDLSGLVIAYEPIWAIGTGDTCDSKEANRVIGLIRSQLSSADVPIQYGGSVKTANIDEIMAQPEIDGALVGGASLDAEGFARIVNYQSA

Crispr_ID: NC_019780_28

• CRISPR_ID: NC_019780_28
• CRISPR_location: 2179993-2180094
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_28

Consensus_repeat	Method
ACCATCTCTGGCAATTCCGCTTCT	CRISPRCasFinder

spacers of NC_019780_28

>28.1|2180017|54|NC_019780|CRISPRCasFinder
GGTTATGGAGGGGGAATTCATAACAGAAGTTCAACTGTAAACTTAACCAACAGC

CRISPR arrays and Neighbor proteins around NC_019780_28

CRISPR arrays

The CRISPR arrays of NC_019780_28

>merge|NC_019780|28|2179993-2180094|CRISPRCasFinder
ACCATCTCTGGCAATTCCGCTTCTGGTTATGGAGGGGGAATTCATAACAGAAGTTCAACTGTAAACTTAACCAACAGCACCATCTCTGGCAATTCCGCTTCT

>NC_019780|28|28|2179993-2180094|CRISPRCasFinder
ACCATCTCTGGCAATTCCGCTTCT	GGTTATGGAGGGGGAATTCATAACAGAAGTTCAACTGTAAACTTAACCAACAGC
ACCATCTCTGGCAATTCCGCTTCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229783.1|2171432_2171777_+|phage-holin-family-protein	unknown	unknown	gnl|CDD|377198
NC_019780.1|WP_156800765.1|2191812_2191974_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229787.1|2177930_2178200_+|hypothetical-protein	unknown	unknown	gnl|CDD|235093
NC_019780.1|WP_015229790.1|2181336_2187807_+|pre-peptidase	unknown	unknown	gnl|CDD|380078
NC_019780.1|WP_041235448.1|2193970_2194981_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187563
NC_019780.1|WP_015229784.1|2171871_2173032_+|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NC_019780.1|WP_015229799.1|2195291_2196338_+|long-chain-acyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|184944
NC_019780.1|WP_015229797.1|2193192_2193888_+|aldehyde-oxygenase-(deformylating)	unknown	unknown	gnl|CDD|237879
NC_019780.1|WP_041235446.1|2177303_2177528_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235447.1|2190567_2191296_-|LPS-export-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224060
NC_019780.1|WP_015229781.1|2168386_2169046_+|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl|CDD|234604
NC_019780.1|WP_015229785.1|2173548_2174448_-|lipoyl-synthase	unknown	unknown	gnl|CDD|235493
NC_019780.1|WP_015229788.1|2178200_2178560_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_019780.1|WP_015229796.1|2192254_2193058_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NC_019780.1|WP_156800763.1|2176346_2176601_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235819.1|2169392_2171378_+|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193
NC_019780.1|WP_156800764.1|2189893_2190559_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl|CDD|235067
NC_019780.1|WP_015229791.1|2188059_2189355_+|adenylosuccinate-lyase	unknown	unknown	gnl|CDD|180954
NC_019780.1|WP_015229780.1|2167513_2168221_+|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NC_019780.1|WP_015229795.1|2191303_2191750_-|hypothetical-protein	unknown	unknown	gnl|CDD|224845

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229783.1|2171432_2171777_+|phage-holin-family-protein	gnl|CDD|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	1.25225e-21
NC_019780.1|WP_015229787.1|2177930_2178200_+|hypothetical-protein	gnl|CDD|235093	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR.	0.000807476
NC_019780.1|WP_015229790.1|2181336_2187807_+|pre-peptidase	gnl|CDD|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	4.33964e-08
NC_019780.1|WP_041235448.1|2193970_2194981_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.52829e-68
NC_019780.1|WP_015229784.1|2171871_2173032_+|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	7.54873e-115
NC_019780.1|WP_015229799.1|2195291_2196338_+|long-chain-acyl-[acyl-carrier-protein]-reductase	gnl|CDD|184944	PRK14982, PRK14982, acyl-ACP reductase; Provisional.	0
NC_019780.1|WP_015229797.1|2193192_2193888_+|aldehyde-oxygenase-(deformylating)	gnl|CDD|237879	PRK14983, PRK14983, aldehyde decarbonylase; Provisional.	1.37399e-169
NC_019780.1|WP_015229796.1|2192254_2193058_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.37417e-79
NC_019780.1|WP_041235447.1|2190567_2191296_-|LPS-export-ABC-transporter-ATP-binding-protein	gnl|CDD|224060	COG1137, YhbG, ABC-type (unclassified) transport system, ATPase component [General function prediction only].	1.25586e-133
NC_019780.1|WP_015229781.1|2168386_2169046_+|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl|CDD|234604	PRK00058, PRK00058, peptide-methionine (S)-S-oxide reductase MsrA.	1.46278e-152
NC_019780.1|WP_015229785.1|2173548_2174448_-|lipoyl-synthase	gnl|CDD|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NC_019780.1|WP_015229788.1|2178200_2178560_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	1.86606e-17
NC_019780.1|WP_041235819.1|2169392_2171378_+|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	2.28705e-176
NC_019780.1|WP_156800764.1|2189893_2190559_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl|CDD|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	3.41984e-127
NC_019780.1|WP_015229791.1|2188059_2189355_+|adenylosuccinate-lyase	gnl|CDD|180954	PRK07380, PRK07380, adenylosuccinate lyase; Provisional.	0
NC_019780.1|WP_015229780.1|2167513_2168221_+|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	2.27341e-118
NC_019780.1|WP_015229795.1|2191303_2191750_-|hypothetical-protein	gnl|CDD|224845	COG1934, COG1934, Uncharacterized protein conserved in bacteria [Function unknown].	4.98329e-21

Protein sequences

>NC_019780.1|WP_015229788.1|2178200_2178560_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MTSFPQFPRQGEVYLSKALRQSGDTKKRPVVVVSIDLRNQYSSTVLVVPFSSDIASASSNPCRPLVRKGEGGLEADSIAMCDLITTIAKRYLEPSPYGIISQDSLSKIQTAIKIAVGLF
>NC_019780.1|WP_015229787.1|2177930_2178200_+|hypothetical-protein
MFSSPSSPKQRITITIDTSLLQEVDRFSNNRSAAVEEALHLWRKQQIENQLRSFYQNRSQSDIEEEYLWADQTQEAAMMCWEDSDPSRL
>NC_019780.1|WP_041235446.1|2177303_2177528_+|hypothetical-protein
MISSFVARSRPELKFLPNSIAHPTLNSDRAPSPNPIAHSPSNPIAPPPENLDRTPSPNLDVAKRPPFLPRAADS
>NC_019780.1|WP_156800763.1|2176346_2176601_+|hypothetical-protein
MMSSFVARCREATALRASRPLPQTLIAPPPQTSIAPPSSNPDRAPSLKPRCWSEATALQASHSELEFLTPIIYNRLVGSSLLIL
>NC_019780.1|WP_015229785.1|2173548_2174448_-|lipoyl-synthase
MTVKPDWLRVKAPQFERVGKVKDTLRDLELNTVCEEASCPNIGECFQKGTATFLIMGPACTRACPYCDIDFEKKPQPLDPTEPLRLAEAVRRMGLNHVVITSVNRDDLSDDGSSQFVRCIEETRKLSPKTTIELLIPDLCGHWDALATILEAEPDVLNHNIETIPRLYRRVRPQGDYARSLELLQKTRELAPWIYTKSGLMVGWDETEAEVKAVMDDLRKVDCDIVTIGQYLQPTQKHLGVKQFVTPETFAEWRKYGESIGFLQVVSSPLTRSSYHAEQVQTLMKQHPRSKSYHQSSVR
>NC_019780.1|WP_015229784.1|2171871_2173032_+|PDZ-domain-containing-protein
MLSKKMRKFLTYLIVLVFGVLIGLGGYKVLPSQAETIARSNAVAETPNPQTITNRFVSLAVEKVGDTVVRIDTERTVTQTNPFADDPFFRRFFGDDFNVPRERRLRGQGSGFIVDSNGIVLTNAHVVNQADQVSINLKDGRTFDGKVLGADPVTDLAVIKINGSNLPTATLGDSDKVRVGDWAIAVGNPLGLDNTVTLGIISTLSRPSAKVGIPDKRLDFLQTDAAINPGNSGGPLLSDRGEVIGINTAIRADANGIGFAIPVNKAKEIYPRLAQGKRVSHPYIGIRMITLTPELAQEINRDPNAGLMIPETEGVLVMQVQPDTPAARSGIRRGDVITRIAGTRVTSAEQLQRLVENSNVGEKLEFQVRRGEQVETFSVFPAELDA
>NC_019780.1|WP_015229783.1|2171432_2171777_+|phage-holin-family-protein
MPQFLITWIATAIALLITAKIVPGLVVDSISASIIGTAVLGFVNAIVKPILFIFTLPLTILTLGLFLLVLNAITFGIVGYLTPGFEVDGFLPALFGSLVLSFIAGLLNQFFQGD
>NC_019780.1|WP_041235819.1|2169392_2171378_+|single-stranded-DNA-specific-exonuclease-RecJ
MIPSQRWTISEFNSEQTNPLVEATGLSPLLAQVLINRGFVTPDIAQVYVNPETETLPLPQQEFPDLEKSVDLIINAIEAEESIIICGDYDADGMTSTALLLRTLRHLGAYVDYLIPSRMKEGYGINTRIVEECASHGVGLILTVDNGIAAYDPIFRAVELGIEVIITDHHDLPETLPPADAILNPKLLSEISPYRGLAGVGVAYVLAVRTAQKLEKLQGFTSQLLELFTLGTIADLAPLVGVNRRWLKRGLRQLPKSKIPGVQALMQVSGVNDVQKTVKPDDIGFRLGPRINAIGRISDPQIVIELLTTDDDGIALEKAMQCEQFNKKRQELCETIQQEAIAYLEAGKIDWLRDRVLVIVQPNWHHGVIGIVASRLVEQLGVPVFIGTYEEGDTSKIRGSARGIPEFNIFDALEYCQDLLGKFGGHKAAGGFGLEANNLEAFRERLSEFAHQYLEPKHLKPLVNIDAIATFEDLTNDFYQQIDSLQPWGIGNEEPIFLSQNVSVVQQRVVGKDHLKLTLSQTTGEKVISKSAIAWRWGNYFPLPPTIDVAYKLRENHWQGQITLELELVGFRLPQATAEKQTTYDYQGRNYHCCLWEDLNELRIENDRGNLLVVSKGNRNGQLKTNSQELKTIDVTQPPYYQIVKAAVSALEETTSPLSDG
>NC_019780.1|WP_015229781.1|2168386_2169046_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MGLFGFGKKLSLPNREEALPGRDQAMPINNQHYVNNNPIQPPFPEGMELALFGMGCFWGAEKAFWQLSGVYSTAVGYAGGITPNPTYQEVCTGMTGHNEVVRVVYDPSKISYLTLLKTFWESHDPTQGMRQGNDVGTQYRSGIYVYNDQQRKLAESSKTEYQKALMQKGYGNITTEIVDAPEFYYAEDYHQQYLAKNPNGYCGLGGTRVAFPAMTETVS
>NC_019780.1|WP_015229780.1|2167513_2168221_+|ribose-5-phosphate-isomerase-RpiA
MADTDLSKIMKQEVGKAAADRVKSNSIVGLGTGSTTAFAIQFIGERLQRGELKNIQGIPTSFQAEVLSKQYGIPLTTLDAVDHIDVAIDGADEVDPNKNLIKGGGAAHTREKVVDSLADQFIVVVDSGKLVDKLGSTFLLPVEVIPMAMTPVMRKLTQLGGKPELRMGVKKAGPVVTDQGNLVIDVKFDEIPNPESLEKEINNIPGVLENGLFVGVADVVLVGEVKADQASVREF
>NC_019780.1|WP_015229790.1|2181336_2187807_+|pre-peptidase
MAQQIITTEELLSVISGQDLATIVVEYSTEDPLNSPARGLGFKLHYDSSQLQFEDFSDVFTFGAQPQDFTQLAPQDDRNDLDNNPQTDQVISFLYADPDVFSNPSATLDWPLADNNIDSLPVSLFAVNFDSSNLETETVVNFTLSQVQEGFDNQRNEILSTTTVVPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYEIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDRSTLNLTLAQVQEGFDNQRNEILSTTTIIPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYDIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDRSTLNLTLAQVQEGFDNQRNELVNSLEIEAVLGNPPIVENFLDNITLTQGELPDPINLFDTFEDTEDDDANLTYTVVENTNSELVETALDTESGELNLIPATAAGSSEITIEATDSQGLRVRETFTLTINRQNGKPSINAPLNEITLTQGENLDPINLFDTFQDDQDTDEELKLTANSSNKNLVRTALDSNTGRLFLQFPSTRTGSSEITVSAVDSSGLTTTETFTVTVNPSGEAISLEENNDTLETASTPQLSPDTPNLNLAGEIGDNNFGDQDIDLYRLELQKGDQLTADINTDDNSSFDSFLRLFDSFGQEVERNDDSQQGENDSLLEFSADTSQTYYIGVSGFGNDQYNPNLENSGSKGDTGSYNLALTLTSTASETPNDTISQAIATSALIQENGQFQQPGFLGDNSTLNNPNLDVDFYEIQLTQGETATIDIDTTENSPLNPILRIFNATGGNVPNGFNDNAKAPGEQLGNDPYLEFTAPFSGSYYVGVSDQANDLYSPYNPESGQSPGATGAYAINITQDVSREDSPPEASPNDTLDTATALLVGDEIQGNIGDRTEFVTVPGLDVDVYTLTLEADQAIRINLNRTSQLDPILRFFNSEGEEIAFNDDIGSSDNALLELTIPETGDYYIGVSGFGNENYDVTTAGSGKSFASTGSYQLIISDQQPEILEAGEEEENDTLDTATATSLTADSLGSLKQTNAIGNNPNLEEAGLDVDIFQVELDTNTRLTAEINTENFNSEFDSLLRVFNSEGEQLDFNDDESSDSLDSQLEFIPTVAGTYYVGVSGLGNENYNPKTVSSGNAGRIGDYEIELRLNEVTPQENPTNETPETASQVNLTNNRFSTNGVIGDNTNVEVDRDFYEIDLEQGSILNIRVNGDNLESFVRLFNSKDEEIPLEYEAGDFPHPSLNLTIPEDDTYFLQISAFDNNEDGIPDDSIGDYRLNLAVAPPPLAAQPPVEEIRPTANNDRFRAASQRTAIFNVLGNDSANDDQGFLEITDFTATTEKGGTVELDNQSRLRYTPNPDFGGVDTFTYTVANESGGFDQGTVEVNVNRPPEGASVQVELDVRSVPGKEDQLNDGLQIGEEFIVDVRFLDRVNSENPSQAVRSGYADLRFNPNQSQVVTDTDIDNDQITDGIIRYPEYPGGRKGTVRNAEGLVDEVGGFSISQDPPEAENRIFSLHLQAIGGGNTALFASEAGQQIGSAITLFDTFITDQRNQTNFPEIDIATVTNSETVESAFPVNLANNNVIEQGEISGVQGIIEAMQVNIDFQDLAGNSLEDVAVGEEFKIVLSAEDLRPDGQQLGVFSVFADVFYDTVLIDVTEAELVGDFASPVLELPTAVEQGSGEGLIDELGGTKENFNPVRSGSQTFAELTVTAKAPGQLDVSTNAPEGKTAKNTLFGVDVEVTEGTVYSEKRLDILGETEEGNPDLVITEFDAVVDHVLGGETEVNLTVENQGDGTSPGFQVEILYYTADDLGELEEEEPMVVKTLAFEELTESRSETAAVSLPVEVMLAEALEDDPSVFGETVPDEGFFESNNIDYLGVRLVNSESSGETTEEFTNNGVDGTEGVNVDDIAYFPWDVVNNNGDGVIAGEEDDLISDRQVTPVDANFVFENIGEVITDEVVESQQVGTEGLDLSRIDLDLDGAISPVDAVRVGNRVNYQLNSAINDDVVG
>NC_019780.1|WP_015229791.1|2188059_2189355_+|adenylosuccinate-lyase
MIERYTLPAMGELWTNEAKLKTWLDVELAVCEAQAELGNIPETALTEIKEKANFDPQRVLEIEKEVRHDVIAFLTNVNEYVGEAGRYIHLGLTSSDVLDTGLALQLVASLNLILEELEALAQAIRYQAQQHRYTVMVGRSHGIHAEPITFGFKLAGWLAEIFRHRDRAIHLRNEIGVGKISGAVGTYANIDPRVESLACEKLGLQPDTASTQVVSRDRHAQFLQQLALLTASLERFAVEIRNLQRTDVLEVEEYFSKGQKGSSAMPHKRNPIRSERLTGLARVVRGNAMTALENVALWHERDISHSSAERVILPDSCILTHFMLHETTDLIKNLLVYPENMQRNMNIYGGVIFSQRVLLTLVEKGMSREEAYQIVQRCAHQAWNQADGDFYKLVTEDSTIKNTLSSSEIDSCFDPQHHLDNLNTIYQRLGI
>NC_019780.1|WP_156800764.1|2189893_2190559_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MPLPKSESTNMTDFSSAIPIDRICYNEQGLVPAIVQDYLDGTVLMMAWMSSESLQKTLETGETWFWSRSRQELWHKGETSGHLQKVKAVRYDCDSDALLITVEQLGDIACHTGERSCFHQVEGTKTPPPADTLSGLYEVICDRRDRPQVESYTCKLIAGGDNKILKKIGEEAAEVVMACKDDDPSDIASEVADLFYHTLVALAYHNADVKEVYKKLQERKR
>NC_019780.1|WP_041235447.1|2190567_2191296_-|LPS-export-ABC-transporter-ATP-binding-protein
MSLVLKHIHKSYGKLTVVNGVSLMVSPGEIIGLLGPNGAGKTTTFYIATGLVKPDQGSVWLGEENITGLPIDRRSRLGIGYLPQQTSIFRHLTVADNLRLVLEQNGFSQRRKRQRLEGLLREFRLENIANTGGSRVSGGERRRTELARALAVGEKGPRFLLLDEPFAGVDPIAVSELQSLVEELRSQNMGILITDHNVRETLEITDRAYIMSQGGILAAGKAQELYNNPLVRQYYLGEQFEL
>NC_019780.1|WP_015229795.1|2191303_2191750_-|hypothetical-protein
MFKQGLFFPLKSGFLAVTLLGMMAFSSTSSLAQSGNSNGQNTMTVQSDVQEANSETGVITARGNVQINYPLQALQATAAQAQYFRNERRLVLTGDVYVLQGENSIRAEKVVYLLEEGRFVATPKAEQQVRSTYVVPQPQDSSNSSLQQ
>NC_019780.1|WP_156800765.1|2191812_2191974_+|hypothetical-protein
MERNETQHQYLLFVICYLLFVICYLLFVHWSLGDVPWNVSTLVTDYWSLITGH
>NC_019780.1|WP_015229796.1|2192254_2193058_-|carbohydrate-ABC-transporter-permease
MKSFVRFLILLLGGAIVLSPLLIILLTSFAPSGTTASPNFNLSSLTLENYQQAWQQGNFLLAFANSTFVALSVTTLQLITASLAGYALARLRFRGRQSLLLVILATLVIPFQLLVIPIFLVLKFGGLINTYGALILPTAVNGFSIFLMRQYFTTIPIALEEAAFLDGASRWQILREIMLPLARPALVTVFLFTFIGEWNDLFKPLVFTTRPELTTVQLALAQFQEQFTSNWSLLMAAVIMATIPVILLFLVGQRQFIQGISTTGVKQ
>NC_019780.1|WP_015229797.1|2193192_2193888_+|aldehyde-oxygenase-(deformylating)
MQDVAVTPTLDYTSETYKDAYSRINAIVIEGEQEAKDNYLHLIQLLPDSKDELTSLSKMEARHKKGFQACGKNLSVTPDMEFAQEFFAELHQNFQDALAEEKVVTCLLIQSLIIECFAISAYNIYIPVADPFARKITEGVVKDEYTHLNYGEEWLKAHFDEVKDELEVANRQNLPIIWKMLNQVAADAKILGMEKDALVEDFMIAYGEALSNIGFSTRDIMRMSAYGLREV
>NC_019780.1|WP_041235448.1|2193970_2194981_-|NAD-dependent-epimerase/dehydratase-family-protein
MNMNILVTGGVGFVGSHIVERLIERGENVFVFDVFNNETTKASEKNDNKTYLENKFKLYKEKGGSLVMIKGDLTKYDSIYSAIKENKISRVIHVAGMVDDRRSVMFPMEYVDVNIKGVINLLKACGECKVQHVIQTSTRSCFGQFDSPNTMLYEDSPRHPINPYGATKVASDAFGHVYHTIYPEMKVSIIRIFATYGPRGRPDMIPRICVERIYKGEAIQKFGTGEATRVWIYVSDIVDAYMLTLDNPPRSGFEEYNTGHHVATTLNDMIAMAEKLIGKKAIIEQKPVPKGDASYVGKSCYDKIKAELGWEPKVSLEEGLSLTLKYWLESEERVPI
>NC_019780.1|WP_015229799.1|2195291_2196338_+|long-chain-acyl-[acyl-carrier-protein]-reductase
MFGLIGHSTSMEHAQKAAAQLGYPEYHEQELDFWCSAPPQIVDDIKVTSVTGNTIDGKYIESFFLPEMLTQRRIKAAVRKILNAMAHAQKANIDITALGGFSSIVFENFSLQNNRQVRNVELDFRRFTTGNTHTAYIICRQLELASAQIGINLSQLKVAVCGATGDIGSGVCRWLSEKTSIQELLLVARNQERLHTLQSELGRGKILPMEEALSQADIVVWVASLPKGVEINPETMKKPSLVIDGGYPKNFDARIQNPEVFVLKGGIVEHSLDIEWTMMDMANMDVPNRQLFACFAEAMLLEFEKWYTNFSWGRNQITVAKMEQIGEASQKHGFSPLLLKEAVTAART

Crispr_ID: NC_019780_29

• CRISPR_ID: NC_019780_29
• CRISPR_location: 2410451-2410561
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_29

Consensus_repeat	Method
CGCCCCCTCGCCCCCAACTTTGGGGGAAATTAATT	CRISPRCasFinder

spacers of NC_019780_29

>29.1|2410486|41|NC_019780|CRISPRCasFinder
GATCAAGTCCCCCAGAATTGGAGGATTTAGGGGGCAACTTC

CRISPR arrays and Neighbor proteins around NC_019780_29

CRISPR arrays

The CRISPR arrays of NC_019780_29

>merge|NC_019780|29|2410451-2410561|CRISPRCasFinder
CGCCCCCTCGCCCCCAACTTTGGGGGAAATTAATTGATCAAGTCCCCCAGAATTGGAGGATTTAGGGGGCAACTTCCGCCCCCTCGCCCCGAACTTTGGGGGAAATTAATT

>NC_019780|29|29|2410451-2410561|CRISPRCasFinder
CGCCCCCTCGCCCCCAACTTTGGGGGAAATTAATT	GATCAAGTCCCCCAGAATTGGAGGATTTAGGGGGCAACTTC
CGCCCCCTCGCCCCGAACTTTGGGGGAAATTAATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015229966.1|2401655_2402216_+|DUF3727-domain-containing-protein	unknown	unknown	gnl|CDD|372165
NC_019780.1|WP_015229969.1|2405276_2405684_+|DUF1824-family-protein	unknown	unknown	gnl|CDD|370157
NC_019780.1|WP_156800773.1|2421062_2422448_+|DUF3084-domain-containing-protein	unknown	unknown	gnl|CDD|226809
NC_019780.1|WP_015229974.1|2410616_2412530_-|sulfite-reductase,-ferredoxin-dependent	unknown	unknown	gnl|CDD|237402
NC_019780.1|WP_015229972.1|2408360_2410037_+|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl|CDD|223732
NC_019780.1|WP_015229976.1|2413582_2415355_+|peptidase-S8	unknown	unknown	gnl|CDD|173810
NC_019780.1|WP_015229970.1|2405900_2406137_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl|CDD|238126
NC_019780.1|WP_015229967.1|2404247_2404727_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229978.1|2417951_2419478_-|bifunctional-pantoate--beta-alanine-ligase/(d)CMP-kinase	unknown	unknown	gnl|CDD|237393
NC_019780.1|WP_015229979.1|2420372_2421050_+|global-nitrogen-regulator-NtcA	unknown	unknown	gnl|CDD|163409
NC_019780.1|WP_015229981.1|2422455_2422854_+|pre-16S-rRNA-processing-nuclease-YqgF	unknown	unknown	gnl|CDD|128971
NC_019780.1|WP_015229971.1|2406541_2408020_-|cobyric-acid-synthase-CobQ	unknown	unknown	gnl|CDD|234838
NC_019780.1|WP_015229982.1|2422819_2423278_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl|CDD|376771
NC_019780.1|WP_015229975.1|2412745_2413309_+|manganese-efflux-pump	unknown	unknown	gnl|CDD|308338
NC_019780.1|WP_156800891.1|2423719_2425081_-|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl|CDD|376670
NC_019780.1|WP_015229964.1|2400359_2400620_-|glutaredoxin-3	unknown	unknown	gnl|CDD|274017
NC_019780.1|WP_041235469.1|2402366_2402618_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229968.1|2404740_2405211_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015229977.1|2415479_2417519_+|DUF262-domain-containing-protein	unknown	unknown	gnl|CDD|377008
NC_019780.1|WP_041235849.1|2400698_2401454_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015229966.1|2401655_2402216_+|DUF3727-domain-containing-protein	gnl|CDD|372165	pfam12527, DUF3727, Protein of unknown function (DUF3727). This domain family is found in bacteria and eukaryotes, and is approximately 100 amino acids in length.	2.1167e-32
NC_019780.1|WP_015229969.1|2405276_2405684_+|DUF1824-family-protein	gnl|CDD|370157	pfam08854, DUF1824, Domain of unknown function (DUF1824). This uncharacterized family of proteins are principally found in cyanobacteria.	7.57119e-57
NC_019780.1|WP_156800773.1|2421062_2422448_+|DUF3084-domain-containing-protein	gnl|CDD|226809	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown].	9.87407e-80
NC_019780.1|WP_015229974.1|2410616_2412530_-|sulfite-reductase,-ferredoxin-dependent	gnl|CDD|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NC_019780.1|WP_015229972.1|2408360_2410037_+|SulP-family-inorganic-anion-transporter	gnl|CDD|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	2.22281e-147
NC_019780.1|WP_015229976.1|2413582_2415355_+|peptidase-S8	gnl|CDD|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	1.04563e-126
NC_019780.1|WP_015229970.1|2405900_2406137_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl|CDD|238126	cd00207, fer2, 2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.	1.73772e-11
NC_019780.1|WP_156800891.1|2423719_2425081_-|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl|CDD|376670	pfam01933, UPF0052, Uncharacterized protein family UPF0052.	4.01102e-146
NC_019780.1|WP_015229979.1|2420372_2421050_+|global-nitrogen-regulator-NtcA	gnl|CDD|163409	TIGR03697, NtcA_cyano, global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C. [Regulatory functions, DNA interactions].	2.70834e-120
NC_019780.1|WP_015229981.1|2422455_2422854_+|pre-16S-rRNA-processing-nuclease-YqgF	gnl|CDD|128971	smart00732, YqgFc, Likely ribonuclease with RNase H fold. YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.	1.94397e-16
NC_019780.1|WP_015229978.1|2417951_2419478_-|bifunctional-pantoate--beta-alanine-ligase/(d)CMP-kinase	gnl|CDD|237393	PRK13477, PRK13477, bifunctional pantoate--beta-alanine ligase/(d)CMP kinase.	0
NC_019780.1|WP_015229982.1|2422819_2423278_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl|CDD|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	7.74393e-52
NC_019780.1|WP_015229975.1|2412745_2413309_+|manganese-efflux-pump	gnl|CDD|308338	pfam02659, Mntp, Putative manganese efflux pump. MntP is a family of bacterial proteins with a signal peptide and four transmembrane domains. It is a putative manganese efflux pump, since deletion of the gene leads to profound manganese sensitivity and elevated intracellular manganese levels in bacteria. Manganese is a highly important trace nutrient for organisms from bacteria to humans, and acts as an important element in the defense against oxidative stress and as an enzyme cofactor.	2.40524e-49
NC_019780.1|WP_015229964.1|2400359_2400620_-|glutaredoxin-3	gnl|CDD|274017	TIGR02181, GRX_bact, Glutaredoxin, GrxC family. Glutaredoxins are thioltransferases (disulfide reductases) which utilize glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system. Glutaredoxins utilize the CXXC motif common to thioredoxins and are involved in multiple cellular processes including protection from redox stress, reduction of critical enzymes such as ribonucleotide reductase and the generation of reduced sulfur for iron sulfur cluster formation. Glutaredoxins are capable of reduction of mixed disulfides of glutathione as well as the formation of glutathione mixed disulfides. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides. [Energy metabolism, Electron transport].	7.64822e-42
NC_019780.1|WP_015229977.1|2415479_2417519_+|DUF262-domain-containing-protein	gnl|CDD|377008	pfam03235, DUF262, Protein of unknown function DUF262.	2.10641e-27
NC_019780.1|WP_015229971.1|2406541_2408020_-|cobyric-acid-synthase-CobQ	gnl|CDD|234838	PRK00784, PRK00784, cobyric acid synthase.	0

Protein sequences

>NC_019780.1|WP_015229972.1|2408360_2410037_+|SulP-family-inorganic-anion-transporter
MQITNRIHFRNLKGDIFGGVTAAIIALPMALAFGVASGAGATAGLWGAVLVGFFAALFGGTPTLISEPTGPMTVIMTAVIANLTASNPENGMAMAFTVVIMAGCFQILFGALKLGKYITLMPYTVISGFMSGIGVILVILQIAPLLGHESPSGGIIGTLKALPELLSTLNTAELGLGVLTIAILFLTPKQWKRVVPPQLIALVLGTVVSLFAFSNLDLRRIGEIPAGLPSLQVPTFSIDQLQLMVVDALVLAMLGCIDALLTSVVADSLTRTQHNSDKELIGQGLGNLASGMFGGLAGAGATMGTVVNIQTGARTALSGLTRAFVLLIVVLWAGSLTATIPMAVLAGIAMKVGVDIIDWNFLKRAHQVSIKGALIMYGVIGLTVFVDLITAVGVGIFIANILTIRRLTDLRSEDVNAISYADDKIVMNEREKELLDGAAGRVLLFHLSGPMIFGVSKAISRQQDMAGDYNVLILDLSDVPLLGVTSSLALENAVKDAVEKGRHVLVAGATGKVKDRLQRLEIAELIPRDHFVTDRLTALELANEFIAQESVASSVTAS
>NC_019780.1|WP_015229971.1|2406541_2408020_-|cobyric-acid-synthase-CobQ
MKQALMVVGATSHAGKSLLCAAICRMLYRRGWRVTPFKGQNMALNAYVTDNGDEIGYAQAVQAWAAGIKPTVEMNPILLKPQGDMTSQVILNGKAVGRTQAQQYYEQYFDRGWQAITTALDTLSQTYDYIVCEGAGSPAEINLMHRDLTNMRVAQYLNASTLLVVDIERGGSFAHIIGTLEILKHANAGHDLIKGIIINKFRGQESILQPGIEWVENYTGIPVIGVIPYLQQVFPAEDSLDLLERRGRKPNTDLTIAIIHLPKISNFTDFDPLEAETSVNVRYVRPEDDLGNPDVVILPGSKTTNTDLNHLHKTGMVMALKQYIEQGGTIFGICGGFQMLGETLSDPDGLEGEAGDYSGVGLFPLKTTITSEKLTRQRDVNPIFPEDNQVSVTGYEIHQGRTHFTGDSKQLISLFEDTELGYVNANASVWGCYLHGLFENGTWRRQWLNLLREKKGLSPLPTNVPHHRQQREEVLDIATDIIEKHLDLNFFQ
>NC_019780.1|WP_015229970.1|2405900_2406137_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSVKVHFLPDDIIIEAQPGEPILDVAERAGLFIPTGCMMGSCHACEVELGDGTPICSCISAIPDQESLTINLLDDIVW
>NC_019780.1|WP_015229969.1|2405276_2405684_+|DUF1824-family-protein
MEITQARKLLDQFSCTEQKSVETQEQKQELQTAIQDIVKESEWENLGVCAENTQQAIIALKTYLMAFGYVLNQVDFNQVDQLKTPVYIKFSTKQMGFYQDNYTGDYRGVLVSCQAEDDLIAGVYGHLPLDLFEEK
>NC_019780.1|WP_015229968.1|2404740_2405211_+|hypothetical-protein
MKELNPNESYPCPICRSGKVESLPLMEDTFSCQFCQHLFTANFSQQILKVVDSEIPLSWYWNGKKWSSPQRKGIQLGWGYVVAAVFFILLPPLLVGTGAFLFPPVPGTPLAWLPLAWTILTLLTHFGIFLWLVAEYYQFPVVMYLRAVMRRNDRAF
>NC_019780.1|WP_015229967.1|2404247_2404727_+|hypothetical-protein
MEIDQQLEQLIQEAPADRGMPKIMEYAIAPMLKAIAENLQHQDYYILQNAEESWQVTTLRHREDQNVTKRVIYGFPTLEDAGIFAQHNDDPQLMALPVPVTHILFELLAFDQVDSVIFFEESGNYENATDIPREKLQESIREKLKQLKDKMEQPPANLA
>NC_019780.1|WP_041235469.1|2402366_2402618_-|hypothetical-protein
MNGDSLAVNGNRIDGGSDDDQLLVSQNDRAFGGSGNDVILSGEGENRLYGGLEMMTFLSLTTIESSEETESIAFSWKQEETIA
>NC_019780.1|WP_015229966.1|2401655_2402216_+|DUF3727-domain-containing-protein
MSSSPFSQDQPPSSPEIKVLIDEEARSLYCYVEQSFRSKGVQYYLLMPIDSPVSIIMWEEDEDAEQAILIEGEAEIDALFPKAEASLAEEGLTLKRTSFTLTVAGELPEPEDDDILTLEIETERAWEEEEFQLLAIFSHKNQEYGVYTPLVPLLFFAKAEPNGELELLSVDELETIKPILEEWMFN
>NC_019780.1|WP_041235849.1|2400698_2401454_-|hypothetical-protein
MAIIALRAWYLGEYEPLGEVMKRPHDLRLNKNSLLKAGLRADFLDERETVEQAQWFQRYLEGETVEFYIEGSGGYQIANIDLISQEIYLIKREVNALLDPMIYFSYQEEYTEAYEALKESLEAAIEDFNRNARIPLSIEYSVRPKDDPLRLSKNQLRKIRKSLVFIADGTPLAQIQKEQTTMLLPSPTVSVELGYALQCKRREQILLTQMKRWEGSYPFDLPEPQQLFFKTDTDLNAMLPQVLEAMLQRTL
>NC_019780.1|WP_015229964.1|2400359_2400620_-|glutaredoxin-3
MAANVEIYTWASCPFCLRAKALLTQKDIPFTEYSIDGDEDARDQMAQRANGKRSVPQIFIDDHSIGGCDELYALEKDGKLDAMLSS
>NC_019780.1|WP_015229974.1|2410616_2412530_-|sulfite-reductase,-ferredoxin-dependent
MVASKPAKTAKPSKLEGIKENSNFLREPLTSELQEDTTHFSQDAVQILKFHGSYQQDNRDNRQKGQEKDYQFMLRTRNPGGFIPPELYLTLDDLANEYGNQTLRVTTRQGFQLHGILKKNLKETISRIIRNMGSTLGACGDLNRNVMAPPAPFKNSKEYQYAWQYADNIADLLRPQTEAYYEIWLDGEKFVSVEEAPEVQAARERNGNGTIFHEGEEPVYGKYYMPRKFKCCVTVPGDNSIDVYTHDVSLIVITDEDGELQGFNVLAGGGMGRTHNKEETFARMSDPLCYVDKGDVYDLLKAIVATQRDYGDRVQRRNARMKYLLHDWGVEKFRSKVEEYFGKPLPDSKPLPPFEYKDFLGWHEQGDGKLFFGLSVENGRVKDEGSFRLKSALREVVEQYQIPMRLTANHDVILYEINPEDQSAIEAILTNHGLITNPNDLDHLLRYSMACPALPTCGLAITESERALPSILDRVRGVLKKLGMSKQELVVRMTGCPNGCARPYMAELGFVGSAPKSYQLWLGGTPNQTALARPYVDKMPIDELEEYIEPILAFYKQKRNKQESFGEFCNRVGFEAIQEYSANYDPNQVIPSAGGKGRRHRISIYEGLHERLKAAANERGTSMTKIVSEALEQYLDR
>NC_019780.1|WP_015229975.1|2412745_2413309_+|manganese-efflux-pump
MQLVTIGLMSVGLAADAFAVSLTSGFLIKRIKVNKALKIALFFGIFQTLMPLLGWVTGLGFRELVSAIAHWIAFTLLAWLGGNMIYEALTGDEEKPFNPLDNSTLFGLAIATSLDALAAGLGISVIKMPLVITVSIIGLITFLLCFLGVFMGHRFGNLLSEKVEVIGGLILIGIGSKILIENLLPIS
>NC_019780.1|WP_015229976.1|2413582_2415355_+|peptidase-S8
MKRLLIFGLFFFGLTFALWNFTLSASQGNYRSYVLDFKEDISQSVIENQLKTLQDKYDVTVELNSEFSDRDRVYILKSEEELPTLKPLKQLLKGTTEAIDRNYRYQAFAIPNDPNYNQQWNFRSINLEQAWDDTQGDGVTVAVIDTGVSQVPDLKQTEFVEGYDFVNDRTQADDDVGHGTHVAGTIAQSTNNNYGVAGIAYKAKIMPIKVLDGNGGGTVADIAEGIRFAANNGADVINLSLGGLGDSHIMSEAIKYANEKDVVIVAAAGNSNQNSAAYPARYPHVIGVSALDAAGVKANYSNFGAGVDISAPGGSEAGKVVQNTISPDTGEAVFTGYQGTSMAAPHVAGVAALIKSAGITEPEEVLSVLKQSVRKVQEDPKNHYGVGQLDAGQAVKLAMRGQISVRDFVRWMRDNGYLNPRFWIDGGTVMLPFKLATVIGGYLLAWFLRNYFPFAWSWALGSGIIAGSSGLFFLKGFYIFDLPQAPFRVMGSSIPELGNAIQGSPILNPFFASVLIPLGLILLLLQHPRWRWFAVGTSLGVASFLAMSAIVSPAVWGLGSGAIARSYLLLNALLCWGLGRLATRDEKAVS
>NC_019780.1|WP_015229977.1|2415479_2417519_+|DUF262-domain-containing-protein
MNVIHLPIYQFLEGSGKSFVIPVYQRDYAWTKINCQKLWDDIVDLSYQGRNDHFLGTLVTIGSGFQEYTIIDGQQRLTTISIMLIALHNYLKQQDQLPQQEQFLSEQVLEFLINKYAPEKHQRIRLKPNQQDQTSFASLFEDDRSFDGQSNIINNYKFFYDKISSGQLSPSQFFQSFQKLKIVLIDLVREQDDPQLIFESLNSTGVDLTAGDLIRNYILMDLPPIEQDQMYKNYWLKIENLVGNLAEFVRNYLIYQEKVSVKRDDVYTVFKKFAVKQFNNDKETIVKDLLYFAEIYSWLVQIRSHNNTGINHRLLRLNKIEFTVCHPYLFDVFNDLKQGFLTEDAVTEILAIIESYAFRKIIVDNSTQGLNKMFITFSKEIKKETSWKSSYLEILKFKILEKTASQRFPNNQEFETALIYKEIYRTQSKNKNFLLESLENHNSSYKVNLEELTIEHIMPQKLTKDWKEVLGNNWQEIHKKYLHTLGNLSLTAKNQQLSNQSWEDKQAIDYQESKLKLNFKLDRATQWKEEEIVKRGKRLAQEALQIWSYPETKYEKNQPDEQLFDLSSEDSFSGSKPAYLYIENEDAIKLKTWKDLLVYVCRYLYDFSPTQFKHLQNSPEFRWNFDPKKPLRRATEFAENKYVEGNISANGTITFLGKLCERMNYPPEKISFSVKNNKS
>NC_019780.1|WP_015229978.1|2417951_2419478_-|bifunctional-pantoate--beta-alanine-ligase/(d)CMP-kinase
MRLFKTIAGVRTQLQSSWEEKQNIALVPTMGALHSGHLSLIAHAVAENDLVIVSIFVNPLQFEPDSDLDRYPRQLEKDCQLCEEAGVDVVFAPTVEELYPSSLETMTQVIPPSQMTTQMCGKSRPNHFEGVATVVTKLFNIVQPTSAYFGEKDAQQLAIIRRLVIDLNFPIEIRSCPIVREASGLAYSSRNQYLTSEERQQAQALSQGLQASKLAFEQQQVRNATALMDILRQKISSPLDYVALVDPDTLQPLDQVERKGLLALASYVGKTRLIDNIILLDRSPIIAIDGPAGAGKSTVTRRVAAALGLLHLDTGAMYRAFTWLVLNSQVSLDDEARIAELVSQADLQLSLSDHPDVPVRVNLNGEDITQLIRTPLVTRKVSAIAAQKAVRQKLLEQQQQWGEKGGLVAEGRDIGTHVFPNAELKIFLTASVGERARRRQREMVTQNQETIDFEQLQKEIQERDVYDSNRSIAPMRKAPDAIELVTDGLTIEQVIEKIVQLYRVRFSS
>NC_019780.1|WP_015229979.1|2420372_2421050_+|global-nitrogen-regulator-NtcA
MNLFKTPETSLEEVFRQIGSGGIPPVVENFDRGKTIFFPGDPAERVYFLLTGAVKLSRVYETGEEITVALLRENSVFGVLSLITGQKSDRFYHAVAFTPVELLSAPINQAETAFRENAELTRLMLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGQPTAQGIQINLKLSHQAIAEAIGSTRVTVTRLLGELREEEMISIEKKKITVHNPVLLSQQFS
>NC_019780.1|WP_156800773.1|2421062_2422448_+|DUF3084-domain-containing-protein
MMTSALVLIAAILLLGGLLAALGDYLGSKVGKARLRIFKLRPRQTATFVTIFTGTLIAASTLGILFATSESLRKGIFRLDEYLNRLQDARNELAEATQDKREVEAELDKAQQRLDTVNRKFQATEEELGRVSQQVQQLKQQLSNLKQEREKLLAERKRLEAQIVEKDQELAQQKEALKTTENRLEALEKQRNELQTEIEKQDQEIADLDAIIEKRDEVLQFQEQKVKKLENKIAESQEKIQALEQYYENYQALRQGNVALVKGEVLAFNLVKIENSQQTEAVIKRILRQANQKAIEATQPGNKDFQEQIVVITESQVKRLEETLASGEEYVVQIVTAGNYLNGEKKIRVFADVVRNQKIFEKGETIASLSLTPQEVRSGKLLERVELLLAASRFRSRRAGIVGNIVVGESNLEVIQFMEELTTINQSYDQIQAIAAKKTYTVGPLRLKLKVMADEQVILTN
>NC_019780.1|WP_015229981.1|2422455_2422854_+|pre-16S-rRNA-processing-nuclease-YqgF
MVLVLGFDPGRDKCGLALVETTGEIIEQQVVNSEEVISTLNNWLSRYVVGKMVMGNQTTASQWKEKLTASFATIPIEMVDERNSSLEARDRYWELYPARGLSALIPKGMRLPPRPIDDIVAIILVERSRDAI
>NC_019780.1|WP_015229982.1|2422819_2423278_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MTQSSWEVPLANATETQELGAKMAKMLPPNTVILLGGELGAGKTTYVQGLGKGLGITTPIVSPTFTLINEYLEGEIPLYHLDLYRLETPSAIEQLFPETYWEGKEVKPGITAIEWSERLPYFPKHYVQVELLKTETSRQAQIKWHLSIAPPK
>NC_019780.1|WP_156800891.1|2423719_2425081_-|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MKRLRRQWKGKKQKPYTTVNNSRSRRIDRYFMWLAPGIFIKRWLLISVVGVLLTSIGVAIWANLTPIFYLIELTSGILEAIANVLPNYLSGPLAIVLGLFLIFWGQSRTVGSISEVLNPDQDKELIDVLTTHRRLNKGPKIVAIGGGTGLSTLLRGIKVYSANITAIVTVADDGGSSGRLRREQGMLPPGDIRNCLAALADEEKLLTELFQYRFHTGEGLSGHSFGNLFLSAMNNITGDLEQAIAASSKVLAVRGRVLPATLTDVNLWAEMEDGRIIAGESQISEAGGKIIHIGCRPENPPALPAVLSAIEDADLILMGPGSLYTSIIPNLLVPEIREALARVNVPRLYICNIMTQPGETDGYTVSDHIDAIDAVSEMPLFDAVLAQGRSPTAESLQRYAEEKSHPVYVDREDIARLNRRLVLANIMDTSSGQIRHDSYRLGKVIMRWYSRTK

Crispr_ID: NC_019780_30

• CRISPR_ID: NC_019780_30
• CRISPR_location: 2589245-2589332
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_30

Consensus_repeat	Method
TGGTCACTGATTACTGGTCACTG	CRISPRCasFinder

spacers of NC_019780_30

>30.1|2589268|42|NC_019780|CRISPRCasFinder
ATTACTGGTCACTGGGAGACGTTCCATGGAACGTCTCTACAT

CRISPR arrays and Neighbor proteins around NC_019780_30

CRISPR arrays

The CRISPR arrays of NC_019780_30

>merge|NC_019780|30|2589245-2589332|CRISPRCasFinder
TGTTATTTGTTCACTGGTCACTGATTACTGGTCACTGGGAGACGTTCCATGGAACGTCTCTACATTGGTCACTGATTACTGGTCACTG

>NC_019780|30|30|2589245-2589332|CRISPRCasFinder
TGTTATTTGTTCACTGGTCACTG	ATTACTGGTCACTGGGAGACGTTCCATGGAACGTCTCTACAT
TGGTCACTGATTACTGGTCACTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein	unknown	unknown	gnl|CDD|371212
NC_019780.1|WP_041235867.1|2585126_2585891_+|TIGR00297-family-protein	unknown	unknown	gnl|CDD|224749
NC_019780.1|WP_015230125.1|2577504_2579067_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl|CDD|234720
NC_019780.1|WP_156800786.1|2589588_2589810_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl|CDD|234896
NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein	unknown	unknown	gnl|CDD|379571
NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase	unknown	unknown	gnl|CDD|234719
NC_019780.1|WP_041235482.1|2583629_2585015_-|aldehyde-dehydrogenase	unknown	unknown	gnl|CDD|143454
NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|178418
NC_019780.1|WP_015230139.1|2590463_2590607_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230127.1|2580505_2581198_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl|CDD|234581
NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein	unknown	unknown	gnl|CDD|179823
NC_019780.1|WP_015230130.1|2582624_2583392_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase	unknown	unknown	gnl|CDD|223678
NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein	unknown	unknown	gnl|CDD|381265
NC_019780.1|WP_015230126.1|2579037_2580495_-|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl|CDD|223715
NC_019780.1|WP_015230129.1|2581538_2582612_+|DUF3326-domain-containing-protein	unknown	unknown	gnl|CDD|371736
NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein	unknown	unknown	gnl|CDD|370453

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein	gnl|CDD|371212	pfam10726, DUF2518, Protein of function (DUF2518). This family is conserved in Cyanobacteria. Several members are annotated as the protein Ycf51. The function is not known.	3.30077e-80
NC_019780.1|WP_041235867.1|2585126_2585891_+|TIGR00297-family-protein	gnl|CDD|224749	COG1836, COG1836, Predicted membrane protein [Function unknown].	1.2188e-68
NC_019780.1|WP_015230125.1|2577504_2579067_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.71885e-21
NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase	gnl|CDD|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	9.90443e-90
NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein	gnl|CDD|379571	pfam14345, GDYXXLXY, GDYXXLXY protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 171 and 199 amino acids in length. It contains a conserved GDYXXLXY motif.	4.8237e-42
NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.5075e-22
NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase	gnl|CDD|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase	gnl|CDD|234719	PRK00300, gmk, guanylate kinase; Provisional.	7.78703e-107
NC_019780.1|WP_041235482.1|2583629_2585015_-|aldehyde-dehydrogenase	gnl|CDD|143454	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.	0
NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein	gnl|CDD|178418	PLN02823, PLN02823, spermine synthase.	5.2257e-96
NC_019780.1|WP_015230127.1|2580505_2581198_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl|CDD|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	3.86164e-144
NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein	gnl|CDD|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	6.9786e-50
NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein	gnl|CDD|370453	pfam09366, DUF1997, Protein of unknown function (DUF1997). This family of proteins are functionally uncharacterized.	3.63652e-62
NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase	gnl|CDD|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	2.44596e-100
NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein	gnl|CDD|381265	cd12125, APC_alpha, Allophycocyanin alpha subunit of the phycobilisome core. Phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	9.02697e-101
NC_019780.1|WP_015230126.1|2579037_2580495_-|GAF-domain-containing-sensor-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.54114e-39
NC_019780.1|WP_015230129.1|2581538_2582612_+|DUF3326-domain-containing-protein	gnl|CDD|371736	pfam11805, DUF3326, Protein of unknown function (DUF3326). This protein is functionally uncharacterized. It is about 300-500 amino acids in length. This family is found in plants and bacteria.	0

Protein sequences

>NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein
MSVVSQVILKADDELRYPTSGELKGIEEFLKTGEKRMRIAQTFAENESKIVDQASKQLWKLHPEYIAPGGNAFGSRERSLCLRDYGWYLRLITYGVIAGDKQPIESIGLVGVREMYNALDVPVPGMADAIRCLKDASLGLLTAEDATEASPYFDYIIQAMS
>NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase
MGYELPALPYDYTALEPAISKSTLEFHHDKHHAGYVKKFNAAVEGTELDSKPIEDVIKAVAGDDSKTAIFNTGAQAWNHTFYWNSMKPNGGGTPTGELAQKIDADFGSFEKFKEAFKAAGTGQFGSGWAWLVLDNGTLKVTKTLNADNPLTKGQTPLLTMDVWEHAYYLDYQNQRGTYIDAFLDQVVNWEFAAENFAKAK
>NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase
MEIQVSDIISGYAEGLFLMADEGGGLSWYGSRSHAIIPLDHRFRYPKSLRRVLNQNWFEVAINRDFMAVCEGCSDRETTWISDDLKSVYWQLYQAGFAYSFETWQGDELAGGVLGIVVGGAFIGESMFYRIPEGSKVALVKLVEHLRKRGFLLFDAQMQNPHLARFGAYEIKEKEYNKWLSIAIKKPCQFY
>NC_019780.1|WP_041235867.1|2585126_2585891_+|TIGR00297-family-protein
MINLPTVFTPWLIAISINTILLLIAIIAPKKLLTPAGLANAWLLGVIIWGTLSWQGYVVVMFYFLAGSAVTRLGSAEKEAAGIAEKRSGARGPENVWGSALVATICALGVVLNQTANFSLIPTPVLLLAYVASFSTKLSDTTASEVGKAYGKRTFLITTLKPVSPGTEGAVSLEGTLAGMLASVVIAMVGWAVGLISGLGILYCVIAAFFATNLESLIGATLQENFDFLTNEVVNIINTFFGAVIAGAIFVILS
>NC_019780.1|WP_041235482.1|2583629_2585015_-|aldehyde-dehydrogenase
MIMLVTTQVSEIVQAQKDFFATGKTKDIQFRKEQLEKLKTAVTDYQDQITEALFKDLGKPKFEAIVTEVAYVGEEINYFLKHLDKWTKNQPVKTPVNFFPAKSFIVPEPLGQVLIIGPWNYPFQLVIIPLLGAIAAGNCALLKPSEITPNTSKVLADLIANTFEPSYITVVEGDKEIAQELLKQKFDHIFYTGGSAVGRIVMKAAAEHLTPVTLELGGKSPCVVEPDIHIEHSAKRIIWGKFINAGQTCIAPDYLLVHRQIKEELIEAMKAVLREFYGENPAESSDYARIVSEKHFNRLSQFLDNGKIIVGGETDAKNRYIAPTLLDGVNWDDPVMEEEIFGPILPILEYDSLEDAIDQINSRPKPLALYLFSKNKTKQKQVLQETSAGGVTLNDTIVHIASTELPFGGVGESGMGAYHGKASFDTFTHYKSVTNRKFWLDVPLRYPPYADKFKFLKFLFK
>NC_019780.1|WP_015230130.1|2582624_2583392_-|hypothetical-protein
MKTIVYQSVSPNFIPNWLQICLDSVRQWCDRNGWEYALIGDEIFDRVPAWYWEKTRHQKVVATDLGRLLLAKDFLNQGYDRAIWLDADVLIFNPNELEIKVTEEYAFGLEVWIQYDKNNQLRAYPKVHNAICVFCRDNSFLDFYIHACQRIIKRFQGKQMVPQLVGPKFLTLLHNTMELPLITEVAMFSPLVLRDIVNGGGNALNLLQKNQKTPIYGANLSASLAENEEDYQKVTTILLNQKLSLNSMTSTPYFS
>NC_019780.1|WP_015230129.1|2581538_2582612_+|DUF3326-domain-containing-protein
MLTPPFTVVLIVPTGIGAKIGGYAGDALPIARSIAQISDHLITHPNVLNGAQLYWSLPNMYYVEGYGLDQFAANRWGLRPVHQNRVGLILDQGIEPDLRLRHLQAAEAVKTTLGLNIGDYIVTDTPLGVQLQTAHSGASWGTIAHPDSLLRAAATLIETAKVSAIAVVARFPDDMATETLANYRQGKGVDALAGAEAIISHLIVREFQIPCAHAPALSPLPVDETVSPRAAAEELGYTFLPCVLVGLSRAPQLITSIDQSTDLQGKQVDAVVIPADACGGSSILNFSQSEAKIIAVEDNATTMTVSPESLGIKTIRVTSYLEALGVLVTLRGGINPDALRVSASSISRWGEGHETQH
>NC_019780.1|WP_015230127.1|2580505_2581198_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRFDVVTLFPDFFHSPLNSGIVGRALQKKIAEVNFVNPRDFAFDKHHRVDDEPYGGGVGMLLKPEPIFAAVESLPQLPQRDIILMTPQGQPMNQPLFRELASDYEQLVLVCGHYEGIDERIREHLVTREVSLGDFILTCGEIPALALMNGVMRLLPGTIGKADSLKAESFETELLDYPQYTKPAVFRGWEVPPVLRSGHHAAIAQWRKEQQMKRTQERRPDLWEEWKRNQ
>NC_019780.1|WP_015230126.1|2579037_2580495_-|GAF-domain-containing-sensor-histidine-kinase
MSCRWLIILANPQTFGEVDGEKITLEWGGMPDLGTESKLKLSRISPAMVNRLLFPASSEFTALCRSQITNLKEGLNADRGAVYLTKELSSGTRQLVPIVVYPEESDFTEEEAIITSEDSLLENTPFELPSDASSEDKSALTVGSEDIIPDVVNQQNQHQIVFPLLHENVMMGLLVIARQQAQWSQWEFTQIQRTAGTIALACVLDQRYGLSQQKLRQQQWQQEQQRDRLDDILHQLRNPLMALRTFGKLLLKRLNPEENQKSRSFAENIMRESDRLQQLLQDMGDFLEEMGEEEVTIETETTALPEGNSTVKSLPPSQVFDLETIQVTEVITPILESIRAIAQEKNITLKTQIPDSLPLVKANRKAFGEVLNNLLDNAIKYTPEKGSIELIIYQENSQKQNLMIRDNGSGIPPEDQPKIFQRHYRGVQSNSDIPGTGLGLAIVKEYVEKMQGEIDLISPAIPPDNPQKGTAFIISLLVNTTSENV
>NC_019780.1|WP_015230125.1|2577504_2579067_+|CPBP-family-intramembrane-metalloprotease
MTLKRFFLLLLTLLAVGKIVLSLGNSLSQPQIQARLELYQVNLSLHVTALESSAENSQLSSEALLGETPYADAEKKYKEILDFAESRRSDLKTQLQELSEDNLLSNSSSQTLAQVPDLSPQQQQITAQLQELNGFIGELNIKLGILQAKQDQVTTALNTWQALQDQFSTESRFQEIPRTAQVLGGLWEKPPQVLDSAETEIKNGLDGWFQDEALAKLYEIQEDQTALTTLQTQRQEKAEQALIKLGMVTGLPLIGGLIGFGLLLFFGTQWLIKGKESILATNQELKWETPWNWEITWQVLVVGFFFIGQFLLPLVIGISGINPTGWGIQGKALYVLATYVLMTTGGLTVLYFSIRTYFPLPEGWFNWKGNNWLLWGIGGYLVAIPLVVIVSIINQEIWQGQGGSNPLLFLAVQAQDTIALLIFFTTAAIAAPIFEEIIFRGFLLPSLTKYFPVWVSIALSSLLFSVAHLSLSEVLPLTVLGLVLGVVYTRSRNILASIVVHSLWNSGTLLSLYILGSGVN
>NC_019780.1|WP_156800786.1|2589588_2589810_-|hypothetical-protein
MSPLSPLSPLSPISPLSPLHFFEGLRALKPHWVKVSVSQQETLFTFLDLFWIDRAFTDSLYFLFPTDSLGRNA
>NC_019780.1|WP_015230139.1|2590463_2590607_-|hypothetical-protein
MLVLVLLVRLFILGLGGMAGFVAQPQTQHRSRRAIVPKQRQKQPSHS
>NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein
MAGSELKADLWVTEYITPWDIYVHGVTEILAHQKTAFQEMYIVQSGAYGKGLVLDGKWQSSTGDEFLYHEALVHPGMIVHPQPKKVLVLGGGEGATIREVLRWETVEKVKMVDIDGEVVEACKQHLPEMHQGAFDDPRTELVIGDALAVLDQSEEQWDVVISDLSDPIEEGPSFKLFTKEFFEKVDRVLAPDGKFILQAGPVASPYISTHAKLFNTLKTVFEQNVSYTTFVPTYGEPWSLILSSHTAFNTRPEPTAIDRILTEKTTGTLQLIDGITVLGLFQTPAYIRRAIDQHQEIFTLSEPPKFFGKGVSHQSVTSDQ
>NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase
MANGELIVITGPSGVGKGTLVKLLLAHHPELSVSTSATTRAPREGEVEGKDYYFLSSEEFETMIENGEFLEWAKYTGNYYGTPKKAVEEQLQAGKKVILEIEVVGARKVQESFPEATRIFILPPSLPVLEQRLEKRGKDDPKAIEQRLAEAKTEIAAAEEFDYAIVNDDIDRSLIELEKIIFQ
>NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein
MKMQLINIGFGNIVCANRVVAIVSPESAPIKRIVTDARDRGQLVDATYGRRTRAVIITDSSHVILSAIQPETVAHRFVLSKDNQAASN
>NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein
MNKVSLVRFLLPLGFQLALICAIPAPAIYTQITGTKAILQTISVDPYGFLRGYSQTLRYDISRLDTVESLSGWETVVRQTGTGQFPPNGITLYVILQAPNLDRPVSPPRPWQPIAVRHQPPVNLGQNQVAIKGELNNSSVTYGLERYYFPESQRQKMNQAISNLQQNNTQERSFVVEIKVDEKGNAVPISLWLGDKNYRF
>NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein
MESQSTQPKQPETQQRKPFSFYNQFEGTMTLSSDAETVKEYLNAHQGWFVRCAKPMKAQPIGENSYALTIGRFGALGFELEPKLGVELLPETDGIYSMETVAIENPDAEFYEVNYQAALQLVEDTLSNSSQTQVEWTLDLGVTVYFPPFIHRFPKKVIQKTGDRVLAQIVRQVSRRLTHQVQVDFHSRYDLPTVQT
>NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase
MALIIAGERSGVGKTTITLALLSLLAHQQETVQSYKVGPDYIDPMFHTQVTGRPCRNLDPILTSPEYVKQSFLHHSQGVDYAVIEGVMGLFDGVSLGQRHDYASTAHLASLLQVPVALVIDCSRLSGSVAAIAQGYANFHPQVKLAGVILNRVGSERHLTLLKTALDSLQLPILGVFSRQEDIALRDRHLGLIPTNEIEDFSRIQQRLTKMAQESFNLSLLLPLLNAPQTSVPPLWDNIRPQLPVTIGVAFDRAFNFYYQDNLDLLEHLGAKLVFWSPLHDTQLPPELDLLYFAGGFPEMFAPELSQNLPILKQIQSAIKQGRTTYAECGGLMYLSQSITDFKEDRWEMLGILPTETRMKKRLTLGYRQGTPTGNHPLLSTETIIWGHEFHRSQCEDSSPSPLYQLSDLYQNQYQEGWKLGSVYASYLHLHWGTIPEFPQKLLRQNQSLKTLN
>NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein
MYDEDDLTLLETDTDFLEEDPLDQMEAVEEEAPPPLDPEEMLPLLEASDAPQRMLAARAFCELQDDRAVPALINLLSDVCPLVRVSAAYALGRNPNPDAVEPLLNQLATDWNGYVRKGLVWALGNSRDRRSIPPLLHALATDISAVRLWAASALTHVGRLNYEDIIPAIPPIIEGLRKDSVAAVRSNCAWTLGQLCAELPSNVVYATAVDALIETYVEDEDFGVKEDAKASLLKLGDPRGLQMIEELEEEGII
>NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein
MNPEFTIYIKWSAILTGAVFLFTLIAFIFNWGFRFRLVGITGFMGVLTIGLFGLSLGLFSYTDVPGAAPFSVVYDNGGSQVVIKLPQTVTESEVEASLRKASADLYSYGRLGGTDNQMTIRARTVIHPEEGVSKPLYLGKVERQLSQDRSDSNLSIEVFSSQFSLLPTSRNTEAPKVN

Crispr_ID: NC_019780_31

• CRISPR_ID: NC_019780_31
• CRISPR_location: 2594181-2594262
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_31

Consensus_repeat	Method
CTGTTGGGTTTCGCTTGGCTTCAC	CRISPRCasFinder

spacers of NC_019780_31

>31.1|2594205|34|NC_019780|CRISPRCasFinder
CCAACCTACGTTTTCTTCACCCAACCTACGTTTT

CRISPR arrays and Neighbor proteins around NC_019780_31

CRISPR arrays

The CRISPR arrays of NC_019780_31

>merge|NC_019780|31|2594181-2594262|CRISPRCasFinder
CTGTTGGGTTTCGCTTGGCTTCACCCAACCTACGTTTTCTTCACCCAACCTACGTTTTCTGTTAGGTTTCGCTTGGCTTCAC

>NC_019780|31|31|2594181-2594262|CRISPRCasFinder
CTGTTGGGTTTCGCTTGGCTTCAC	CCAACCTACGTTTTCTTCACCCAACCTACGTTTT
CTGTTAGGTTTCGCTTGGCTTCAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein	unknown	unknown	gnl|CDD|371212
NC_019780.1|WP_156800786.1|2589588_2589810_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235869.1|2598339_2599494_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl|CDD|279444
NC_019780.1|WP_015230151.1|2601098_2602022_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl|CDD|234720
NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein	unknown	unknown	gnl|CDD|379571
NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_019780.1|WP_156800785.1|2589131_2589362_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230149.1|2599567_2600437_-|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl|CDD|319818
NC_019780.1|WP_015230154.1|2602719_2604225_-|hypothetical-protein	unknown	unknown	gnl|CDD|373965
NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein	unknown	unknown	gnl|CDD|179823
NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|178418
NC_019780.1|WP_015230139.1|2590463_2590607_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl|CDD|234896
NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase	unknown	unknown	gnl|CDD|234719
NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein	unknown	unknown	gnl|CDD|370453
NC_019780.1|WP_015230152.1|2602050_2602386_+|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|143393
NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase	unknown	unknown	gnl|CDD|223678
NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein	unknown	unknown	gnl|CDD|381265
NC_019780.1|WP_015230150.1|2600538_2600952_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein	gnl|CDD|371212	pfam10726, DUF2518, Protein of function (DUF2518). This family is conserved in Cyanobacteria. Several members are annotated as the protein Ycf51. The function is not known.	3.30077e-80
NC_019780.1|WP_041235869.1|2598339_2599494_-|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl|CDD|279444	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein. This entry includes the following members; FtsW, RodA, SpoVE.	3.60683e-95
NC_019780.1|WP_015230151.1|2601098_2602022_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.347e-13
NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase	gnl|CDD|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	9.90443e-90
NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein	gnl|CDD|379571	pfam14345, GDYXXLXY, GDYXXLXY protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 171 and 199 amino acids in length. It contains a conserved GDYXXLXY motif.	4.8237e-42
NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	1.5075e-22
NC_019780.1|WP_015230149.1|2599567_2600437_-|Cof-type-HAD-IIB-family-hydrolase	gnl|CDD|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.88169e-66
NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein	gnl|CDD|179823	PRK04323, PRK04323, hypothetical protein; Provisional.	6.9786e-50
NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein	gnl|CDD|178418	PLN02823, PLN02823, spermine synthase.	5.2257e-96
NC_019780.1|WP_015230154.1|2602719_2604225_-|hypothetical-protein	gnl|CDD|373965	pfam15611, EH_Signature, EH_Signature domain. This domain with a strongly conserved glutamate at the N-terminus and a histidine at the C-terminus, is found in a SWI2/SNF2 four gene operon. Its strict-neighborhood association with SWI2/SNF2 ATPase strongly suggests a function in conjunction with it. The other genes in the operon are a OmpA protein and a TM protein. This has a DNA related function along with the TerY-P triad.	3.01283e-13
NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase	gnl|CDD|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase	gnl|CDD|234719	PRK00300, gmk, guanylate kinase; Provisional.	7.78703e-107
NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein	gnl|CDD|370453	pfam09366, DUF1997, Protein of unknown function (DUF1997). This family of proteins are functionally uncharacterized.	3.63652e-62
NC_019780.1|WP_015230152.1|2602050_2602386_+|nucleotidyltransferase-domain-containing-protein	gnl|CDD|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	9.43517e-12
NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase	gnl|CDD|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	2.44596e-100
NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein	gnl|CDD|381265	cd12125, APC_alpha, Allophycocyanin alpha subunit of the phycobilisome core. Phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	9.02697e-101

Protein sequences

>NC_019780.1|WP_015230143.1|2592845_2593448_+|GDYXXLXY-domain-containing-protein
MNKVSLVRFLLPLGFQLALICAIPAPAIYTQITGTKAILQTISVDPYGFLRGYSQTLRYDISRLDTVESLSGWETVVRQTGTGQFPPNGITLYVILQAPNLDRPVSPPRPWQPIAVRHQPPVNLGQNQVAIKGELNNSSVTYGLERYYFPESQRQKMNQAISNLQQNNTQERSFVVEIKVDEKGNAVPISLWLGDKNYRF
>NC_019780.1|WP_015230142.1|2592449_2592716_-|DUF370-domain-containing-protein
MKMQLINIGFGNIVCANRVVAIVSPESAPIKRIVTDARDRGQLVDATYGRRTRAVIITDSSHVILSAIQPETVAHRFVLSKDNQAASN
>NC_019780.1|WP_015230141.1|2591885_2592437_-|guanylate-kinase
MANGELIVITGPSGVGKGTLVKLLLAHHPELSVSTSATTRAPREGEVEGKDYYFLSSEEFETMIENGEFLEWAKYTGNYYGTPKKAVEEQLQAGKKVILEIEVVGARKVQESFPEATRIFILPPSLPVLEQRLEKRGKDDPKAIEQRLAEAKTEIAAAEEFDYAIVNDDIDRSLIELEKIIFQ
>NC_019780.1|WP_015230140.1|2590801_2591764_+|methyltransferase-domain-containing-protein
MAGSELKADLWVTEYITPWDIYVHGVTEILAHQKTAFQEMYIVQSGAYGKGLVLDGKWQSSTGDEFLYHEALVHPGMIVHPQPKKVLVLGGGEGATIREVLRWETVEKVKMVDIDGEVVEACKQHLPEMHQGAFDDPRTELVIGDALAVLDQSEEQWDVVISDLSDPIEEGPSFKLFTKEFFEKVDRVLAPDGKFILQAGPVASPYISTHAKLFNTLKTVFEQNVSYTTFVPTYGEPWSLILSSHTAFNTRPEPTAIDRILTEKTTGTLQLIDGITVLGLFQTPAYIRRAIDQHQEIFTLSEPPKFFGKGVSHQSVTSDQ
>NC_019780.1|WP_015230139.1|2590463_2590607_-|hypothetical-protein
MLVLVLLVRLFILGLGGMAGFVAQPQTQHRSRRAIVPKQRQKQPSHS
>NC_019780.1|WP_156800786.1|2589588_2589810_-|hypothetical-protein
MSPLSPLSPLSPISPLSPLHFFEGLRALKPHWVKVSVSQQETLFTFLDLFWIDRAFTDSLYFLFPTDSLGRNA
>NC_019780.1|WP_156800785.1|2589131_2589362_+|hypothetical-protein
MLSGTFSKIGNTSHYIEILYQKARSSATPEKNICYSLFVICSLVTDYWSLGDVPWNVSTLVTDYWSLITGHWSLVC
>NC_019780.1|WP_015230136.1|2588129_2588615_-|allophycocyanin-alpha-B-subunit-apoprotein
MSVVSQVILKADDELRYPTSGELKGIEEFLKTGEKRMRIAQTFAENESKIVDQASKQLWKLHPEYIAPGGNAFGSRERSLCLRDYGWYLRLITYGVIAGDKQPIESIGLVGVREMYNALDVPVPGMADAIRCLKDASLGLLTAEDATEASPYFDYIIQAMS
>NC_019780.1|WP_015230134.1|2586762_2587365_+|superoxide-dismutase
MGYELPALPYDYTALEPAISKSTLEFHHDKHHAGYVKKFNAAVEGTELDSKPIEDVIKAVAGDDSKTAIFNTGAQAWNHTFYWNSMKPNGGGTPTGELAQKIDADFGSFEKFKEAFKAAGTGQFGSGWAWLVLDNGTLKVTKTLNADNPLTKGQTPLLTMDVWEHAYYLDYQNQRGTYIDAFLDQVVNWEFAAENFAKAK
>NC_019780.1|WP_015230133.1|2585933_2586509_-|leucyl/phenylalanyl-tRNA--protein-transferase
MEIQVSDIISGYAEGLFLMADEGGGLSWYGSRSHAIIPLDHRFRYPKSLRRVLNQNWFEVAINRDFMAVCEGCSDRETTWISDDLKSVYWQLYQAGFAYSFETWQGDELAGGVLGIVVGGAFIGESMFYRIPEGSKVALVKLVEHLRKRGFLLFDAQMQNPHLARFGAYEIKEKEYNKWLSIAIKKPCQFY
>NC_019780.1|WP_015230144.1|2594268_2594859_-|DUF1997-domain-containing-protein
MESQSTQPKQPETQQRKPFSFYNQFEGTMTLSSDAETVKEYLNAHQGWFVRCAKPMKAQPIGENSYALTIGRFGALGFELEPKLGVELLPETDGIYSMETVAIENPDAEFYEVNYQAALQLVEDTLSNSSQTQVEWTLDLGVTVYFPPFIHRFPKKVIQKTGDRVLAQIVRQVSRRLTHQVQVDFHSRYDLPTVQT
>NC_019780.1|WP_015230145.1|2594866_2596228_-|cobyrinate-a,c-diamide-synthase
MALIIAGERSGVGKTTITLALLSLLAHQQETVQSYKVGPDYIDPMFHTQVTGRPCRNLDPILTSPEYVKQSFLHHSQGVDYAVIEGVMGLFDGVSLGQRHDYASTAHLASLLQVPVALVIDCSRLSGSVAAIAQGYANFHPQVKLAGVILNRVGSERHLTLLKTALDSLQLPILGVFSRQEDIALRDRHLGLIPTNEIEDFSRIQQRLTKMAQESFNLSLLLPLLNAPQTSVPPLWDNIRPQLPVTIGVAFDRAFNFYYQDNLDLLEHLGAKLVFWSPLHDTQLPPELDLLYFAGGFPEMFAPELSQNLPILKQIQSAIKQGRTTYAECGGLMYLSQSITDFKEDRWEMLGILPTETRMKKRLTLGYRQGTPTGNHPLLSTETIIWGHEFHRSQCEDSSPSPLYQLSDLYQNQYQEGWKLGSVYASYLHLHWGTIPEFPQKLLRQNQSLKTLN
>NC_019780.1|WP_015230146.1|2596613_2597375_+|HEAT-repeat-domain-containing-protein
MYDEDDLTLLETDTDFLEEDPLDQMEAVEEEAPPPLDPEEMLPLLEASDAPQRMLAARAFCELQDDRAVPALINLLSDVCPLVRVSAAYALGRNPNPDAVEPLLNQLATDWNGYVRKGLVWALGNSRDRRSIPPLLHALATDISAVRLWAASALTHVGRLNYEDIIPAIPPIIEGLRKDSVAAVRSNCAWTLGQLCAELPSNVVYATAVDALIETYVEDEDFGVKEDAKASLLKLGDPRGLQMIEELEEEGII
>NC_019780.1|WP_015230147.1|2597762_2598299_-|DUF2518-family-protein
MNPEFTIYIKWSAILTGAVFLFTLIAFIFNWGFRFRLVGITGFMGVLTIGLFGLSLGLFSYTDVPGAAPFSVVYDNGGSQVVIKLPQTVTESEVEASLRKASADLYSYGRLGGTDNQMTIRARTVIHPEEGVSKPLYLGKVERQLSQDRSDSNLSIEVFSSQFSLLPTSRNTEAPKVN
>NC_019780.1|WP_041235869.1|2598339_2599494_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MFKYLIPFFPPEIESWATSARLLRWLTFVWLLIGLVVLFSASYAIANDEFGDGLYYVKRQVIWAYVGLLLFNLVTRISLTRWLKIAPFALILLLVLVITTKFAGVTVNGAKRWLAVGPLLLQPSELIKPFLVLQSAIVFGNWYRLKPFGRVFWLTIFAMVLGGILIQPDLSNTALCGMSLWLIALAGVIRWRYLIMVAASGVGLAALSITFQDYQRQRVISFLDPWAEAQGDGYQLTQSLMAIGSGGISGTGLGLSQQKLFYLPIQYTDFIFAVYAEEFGFVGCVVLLSLIMSFTTVALIIASQALNAVHRLIAVGAVIFLVGQSLINIGVATGSLPTTGLPFPLFSYGGNSVLASLFLAGLLVRVARENHEGNVVEFPSSSRR
>NC_019780.1|WP_015230149.1|2599567_2600437_-|Cof-type-HAD-IIB-family-hydrolase
MTESVINPDSLTFPIPPEIRVVVLDIDGTISGASNEVNPTVVEALKAVKAKGIQVAIATGRMYRSALYFAEAISADLPIICYNGAWMQNPQTNEKLWHLPVPIPLAAELLDYCEQPQRRASLDVHFYLNDQLYVREINEETRLYIERSRIEANAVGDLRQLLTEAPTKVLAMSSNPAITKNLLSTLKQRYSKDDLYLTQSNPYFFEACHPGASKGKAVRYLIEKVLHLQADNTIAIGDNFNDLEMLQYAGIGIAMGDAPLEVQTEANWVAPNVEADGVVAALEKFIFTP
>NC_019780.1|WP_015230150.1|2600538_2600952_+|hypothetical-protein
MVGFIKNIFGSKNDNNGERQPRQKQQAFYLDPDEAKTYGDIDYMRQPTKTRKSFPKTVDNPEGGELIEEVSALEKKSLSKKQSNQKSNQSSSTSVTPSESTQEGKIYSAKDDPEIQKRRQSDSSMDMFRNMAKDIKK
>NC_019780.1|WP_015230151.1|2601098_2602022_+|alpha/beta-hydrolase
MILNQETQATQVYTWNNFQGTYEVIESTETGEKASIALLLIHPIGVGLSRQFWQRFCQQWQGKSQLETIYNPDLIGCGESALPRVAYTPEDFAAPLKKLIEEVIKKPVVVISQGASFPIALELLAMKPSPEIAGLILAGPPAWSIITQEKTEREQRLLWNLFNSPLGGLFYRYARRRNFLQSFSVRQLFEKTEDVDQEWLDMLKTGSEDLNTRHAVFSFLAGFWRKNYEGAIASITQPTLVLMGETASSISRDSDTESAQERIDSYCNVLPNGQGKILPGRNVLPYESTTAFTTACEEFIQQIKSVG
>NC_019780.1|WP_015230152.1|2602050_2602386_+|nucleotidyltransferase-domain-containing-protein
MSSLILSRQLQQTLKQLKQQLQNTYQDQLVNLILFGSQARGDAEPDSDVDILVILAKDVNPVAEIKHNNPLISGLSLETDQLINCIYLSEKDWHHLKTPLLQNIRKEGIFV
>NC_019780.1|WP_015230154.1|2602719_2604225_-|hypothetical-protein
MKNFKSIVSIEPLQLKPTALQRLAYNLENNNEYYPPDLPPEVAQYKNYTPRSLDKILMDLEDGNIDHITFLEWIYCIYAKQEWDREHSSEQRLATSRLVWENAIGNDMLKQRLCSRLAYYYDGNKKVLAPSFVETFSTLSDVVGDDDLTVSVLLQFRKRDPLLPLAQLSLAEELTPKNLFITAQLPSNLSIINDVLEYVVTAFSQSKLQQNHAAWLVQCLEDMTVEQEISAVETLLKNVSAEIGGQFTNLVTWLQNNYGSRTTASKWNRLSSEGKSALRQWFGSANYRDFQRLVDLVASQLPDKDEEEHPEKNQLISRKYFWEQYSNQFKRIRVLLPQSSVNVVGNQFVQNIDILQDDGSEETEICIFDFGDCFVVEFFRGSGSETRIFNRFQYPNIEQELFESSQLSVKRLRALGGKVHDHKYLWQIYCERWLRERRIVPNPGTTYFKRRNKHNPNQPYRDPYDPQKGLREPDADKQSKRKEVLRRWQREIERLEREAKY

Crispr_ID: NC_019780_32

• CRISPR_ID: NC_019780_32
• CRISPR_location: 2656346-2656467
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_32

Consensus_repeat	Method
ATCCCCCCTAACCCCCCTTTGAAAGGGGGGGAATATGTGGAG	CRISPRCasFinder

spacers of NC_019780_32

>32.1|2656388|38|NC_019780|CRISPRCasFinder
ATAAAAGTAGGCCCTTGTGGAGTTTACGAAACCCAACA

CRISPR arrays and Neighbor proteins around NC_019780_32

CRISPR arrays

The CRISPR arrays of NC_019780_32

>merge|NC_019780|32|2656346-2656467|CRISPRCasFinder
ATCCCCCCTAACCCCCCTTTGAAAGGGGGGGAATATGTGGAGATAAAAGTAGGCCCTTGTGGAGTTTACGAAACCCAACACATCCCCCCTAACCCCCCTTTGAAAGGGGGGAATATGTGGAG

>NC_019780|32|32|2656346-2656467|CRISPRCasFinder
ATCCCCCCTAACCCCCCTTTGAAAGGGGGGGAATATGTGGAG	ATAAAAGTAGGCCCTTGTGGAGTTTACGAAACCCAACA
CATCCCCCCTAACCCCCCTTTGAAAGGGGGGAATATGTGGAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173813
NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein	unknown	unknown	gnl|CDD|377801
NC_019780.1|WP_015230191.1|2657749_2658067_-|HigA-family-addiction-module-antidote-protein	unknown	unknown	gnl|CDD|274228
NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein	unknown	unknown	gnl|CDD|226729
NC_019780.1|WP_015230187.1|2653237_2654578_+|hypothetical-protein	unknown	unknown	gnl|CDD|236003
NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein	unknown	unknown	gnl|CDD|378366
NC_019780.1|WP_015230186.1|2651232_2652915_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230192.1|2658212_2658908_-|ribulose-phosphate-3-epimerase	unknown	unknown	gnl|CDD|235515
NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase	unknown	unknown	gnl|CDD|234743
NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350220
NC_019780.1|WP_041235486.1|2646216_2647242_+|DNA-cytosine-methyltransferase	unknown	unknown	gnl|CDD|273211
NC_019780.1|WP_015230188.1|2654607_2655399_-|SAM-dependent-chlorinase/fluorinase	unknown	unknown	gnl|CDD|376645
NC_019780.1|WP_156800790.1|2649709_2650012_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230189.1|2655494_2656103_+|30S-ribosomal-protein-S4	unknown	unknown	gnl|CDD|177038
NC_019780.1|WP_015230182.1|2647221_2647440_-|CopG-family-transcriptional-regulator	unknown	unknown	gnl|CDD|279710
NC_019780.1|WP_015230185.1|2650372_2651233_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NC_019780.1|WP_015230183.1|2647860_2649237_+|phosphomethylpyrimidine-synthase	unknown	unknown	gnl|CDD|237359
NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL	unknown	unknown	gnl|CDD|234573
NC_019780.1|WP_015230180.1|2645096_2645867_+|adenosylcobinamide-GDP-ribazoletransferase	unknown	unknown	gnl|CDD|234697

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase	gnl|CDD|173813	cd07488, Peptidases_S8_2, Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.52346e-58
NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein	gnl|CDD|377801	pfam07277, SapC, SapC. This family contains a number of bacterial SapC proteins approximately 250 residues long. In Campylobacter fetus, SapC forms part of a paracrystalline surface layer (S-layer) that confers serum resistance.	1.66506e-90
NC_019780.1|WP_015230191.1|2657749_2658067_-|HigA-family-addiction-module-antidote-protein	gnl|CDD|274228	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family. Members of this family form a distinct clade within the larger family HTH_3 of helix-turn-helix proteins, described by pfam01381. Members of this clade are strictly bacterial and nearly always shorter than 110 amino acids. This family includes the characterized member HigA, without which the killer protein HigB cannot be cloned. The hig (host inhibition of growth) system is noted to be unusual in that killer protein is uncoded by the upstream member of the gene pair. [Regulatory functions, DNA interactions, Regulatory functions, Protein interactions, Mobile and extrachromosomal element functions, Other].	7.75336e-30
NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein	gnl|CDD|226729	COG4279, COG4279, Uncharacterized conserved protein [Function unknown].	9.93474e-92
NC_019780.1|WP_015230187.1|2653237_2654578_+|hypothetical-protein	gnl|CDD|236003	PRK07373, PRK07373, DNA polymerase III subunit alpha; Reviewed.	0
NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein	gnl|CDD|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	5.72072e-16
NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.8403e-46
NC_019780.1|WP_015230192.1|2658212_2658908_-|ribulose-phosphate-3-epimerase	gnl|CDD|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	2.1046e-141
NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase	gnl|CDD|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.83219e-49
NC_019780.1|WP_041235486.1|2646216_2647242_+|DNA-cytosine-methyltransferase	gnl|CDD|273211	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	2.20415e-115
NC_019780.1|WP_015230188.1|2654607_2655399_-|SAM-dependent-chlorinase/fluorinase	gnl|CDD|376645	pfam01887, SAM_adeno_trans, S-adenosyl-l-methionine hydroxide adenosyltransferase. This is a family of proteins, previously known as DUF62, found in archaebacteria and bacteria. The structure of proteins in this family is similar to that of a bacterial fluorinating enzyme. S-adenosyl-l-methionine hydroxide adenosyltransferases utilizes a rigorously conserved amino acid side chain triad (Asp-Arg-His) which may have a role in activating water to hydroxide ion. This family used to be known as DUF62.	2.93905e-121
NC_019780.1|WP_015230189.1|2655494_2656103_+|30S-ribosomal-protein-S4	gnl|CDD|177038	CHL00113, rps4, ribosomal protein S4; Reviewed.	2.06633e-123
NC_019780.1|WP_015230182.1|2647221_2647440_-|CopG-family-transcriptional-regulator	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	3.6057e-07
NC_019780.1|WP_015230185.1|2650372_2651233_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.23614e-38
NC_019780.1|WP_015230183.1|2647860_2649237_+|phosphomethylpyrimidine-synthase	gnl|CDD|237359	PRK13352, PRK13352, phosphomethylpyrimidine synthase ThiC.	0
NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL	gnl|CDD|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NC_019780.1|WP_015230180.1|2645096_2645867_+|adenosylcobinamide-GDP-ribazoletransferase	gnl|CDD|234697	PRK00235, cobS, cobalamin synthase; Reviewed.	5.76085e-71

Protein sequences

>NC_019780.1|WP_015230189.1|2655494_2656103_+|30S-ribosomal-protein-S4
MSRYRGPRLRITRRLGDLPGLTRKSPRKAYPPGQHGQARRKRSEYAIRLEEKQKLRYNYGVTEKQLMGYMKKARRATGSTGTALLEFLEMRLDNTVFRMGMAGTIPAARQLVNHGHILVNGRVMDIASYQCRPGDVIAVRDRDRSRQLVERNMEYPGLANLPSHLEFDKNTYTGKVNSLIEREWVALQVNELLVVEYYSRKV
>NC_019780.1|WP_015230188.1|2654607_2655399_-|SAM-dependent-chlorinase/fluorinase
MITLTTDFGLQDVYVGVMKGVIASINPNINIVDLSHEISPQNITAGRFCLMNAIPYFPPDTVHIAVVDPGVGSLRKNCAIALPNGFLVGPDNGLFSGVLHQFPAQKVVILNNSKYWRTETVSSTFHGRDIFAPVGAHLASGVPIEELGESISAEDLTPFSFPSPQEQEETIIGYVQYIDYFGNLITNIPATEVRRKQWFAIIKDQVISSGKTYSSCPPQNLVALIGSHGWVEIAINQGNVAKTLGITYGDPIEISFPSTDEKE
>NC_019780.1|WP_015230187.1|2653237_2654578_+|hypothetical-protein
MVKIINRQSLGKQTVYDIGVEKDHNFILGNGLVASNCFNKSHSTAYAYITYQTAYLKANYPVEYMAALLTASSNNTDKLEKYLDTCHRMEIDVEPPDINRSHIDFTPDNDKILFGLSAVRNLGQGAIENILEARKEAGGQFAALADLCARIDLNIVTRRALEALISCGAFDKIKANRNQLLHDLEPVLSWAQSRAKDQASGQTNLFDFSMNGGENDNTVNYKDAPTASPVEDLTASEKLKQEKELLGFYVSNHPLKATKSASAMLSTIMLGDKETLPKKKPVNAIVLVSEVKKIMTKNNDPMAFVKIEDISGEMEGVVFPSSYERVSGYLEEDARLIVWGKIEQKDDRLQMIIEDAEPIEQVKMVMVDFSLEQARDRAFQNQLQQVLRQYVGKKNEAKVPVIGRIKVGTQQQLVRFGQEYWVKDADLTSQKLRDQGFAVESNCILG
>NC_019780.1|WP_015230186.1|2651232_2652915_+|hypothetical-protein
MIQQLIASRLFWWGGSLVFASFYSLQAIKKAFSSQPIIQDDARQYLFWMLRFFDGELFPNDLIADYFQSVTPDGYTTLFRLLSGWGVSPLLLHKLLPLILALILTSYGFFLTLKIFPLPFAGFTAMVLLNQSLWFQDDLASATPRAFVYPLFLAFLYYFLSRNYIGILSAIGLLGTFYPQYIILSAFLLFVSILLVWRKKITDQNTYIFLIITGLTCVLVLLPYALETSEFQPVITREQALVLPEFYPDGRSSFFFPNPIYFWLFAERSGLIPALMPPLIWLGLLLPILCRFPTKFPLVKQLKETGILLRVLLASLICWLLAHLLLFRLHLPSRYTDHSGRIMMAIAGGITITIFLSAGINYFRQKQGKWLQKLWRSGGSLLLVGILFFYPILSERFPMTNYRPVSAIELYNFLEKQPKNSLIASLTAEANYIPMFAKRSVLVAEEYAIPYHLGYYSQLRDRALALITAQYAIEKDVLIEFIQDYKVDFFLLEDSSFTLKYLERDWLQQYPEATEKAVMNLKQGKTPILSKYQESCTVFKHQQFTVISSDCILSLSSTPN
>NC_019780.1|WP_015230185.1|2650372_2651233_+|alpha/beta-hydrolase
MTTQKTTETVNIRGVNHYYEWVRQPSKNHKKPVLVFIHGWGGSGRYWKSTATALSDQFDCLLYDIRGFGRSNLPENHAISFDMEEYAEDLALLLDQFNLEQVYLNAHSMGASFATLFMTRYPEKVKGTILTCSGIFEYNPITFKLFHFAGTYVVKLRFNWFSNLPTMDRLFMARFLHRPIPATERKAFLEDYLLADEAAAAGTIYTAVSKHAATVMPEAFAQVSVPTLLVAGEKDIIIPTRLARKAASLNPNQIEYFELPKTAHFPMLEDAPNYLNKIRQFLSRIQ
>NC_019780.1|WP_156800790.1|2649709_2650012_-|hypothetical-protein
MTDLIEQQGWCYGETELQELLDKVDDDLDAVEKALQNLQGTHSSIVNTLMKLDQSLEKLFSSLSRIEIKLFDDKISRFCPEVIPEERRLQAKETLTEICI
>NC_019780.1|WP_015230183.1|2647860_2649237_+|phosphomethylpyrimidine-synthase
MRTEWIAQRRGESNVTQMHYARQGKITEEMRHVAKRENLSPELIRDEVARGRMIIPANTNHPSLEPMAIGIASKCKVNANIGASPNSSNIDEEVDKLKLAVKYGADTVMDLSTGGGNLDEIRSAIIQASSVPIGTVPVYQALESVHGNVENLTPDDFLDVIEKHAKQGVDYQTIHAGLLIEYLPLVKNRITGIVSRGGGTLAKWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRPGCTHDASDEAQLSELKTLGELTRRAWEHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAPFYVLGPLVTDIAPGYDHITSAIGAAMAGWHGTAMLCYVTPKEHLGLPNAEDVREGLIAYKIAAHAADIARHRPGARDRDDELSEARYNFDWNRQFALSLDPDRAKEYHDETLPADIYKTAEFCSMCGPKFCPMQTKVDAEALTELEKFLAKEEAVSNA
>NC_019780.1|WP_015230182.1|2647221_2647440_-|CopG-family-transcriptional-regulator
MKQTTIYLPEEIEASLQELAKKRGNSISELIEEVIDDYLIKTSQKLPNSMGMGASGRSNLSSKAEQLLLTED
>NC_019780.1|WP_041235486.1|2646216_2647242_+|DNA-cytosine-methyltransferase
METTTAYIPELLETINPVYLNTKPNYQIKNKTIKFIDLFAGIGGMRLGFSSPNSQCVFSSEWDIHAQKTYYANFKETPAGDITTIPPQDIPDHDILLGGFPCQPFSSIGKREGFLHQTQGTLFYSIAKILEAKQPLCFLLENVPGLVNHQKGKTFSVILKTLDELNYDVRYAILDAGDFNLPQRRERIYIVGFKRDYLKQRIDFKFPKGKANQVFINQFLEEGVSGYSISKHLQNTYLFKKSDGKPQIVDQESEVKVKTLVSTYHKIQRLTGTFVRDGETGIRLLSERECKAIMGFPDSFIFPVSRTQMYRQLGNSVAVNVVRSIAQKIYFALEKLVFCQQ
>NC_019780.1|WP_015230180.1|2645096_2645867_+|adenosylcobinamide-GDP-ribazoletransferase
MKKFISFCHFILQSWWGAVAFYTILPLPTSWSLQLGQIARFAPLIGILIGSLLALGDWGLSLCGVPILTRSALIITSGVALTGGLHLDGVIDTADGLAVLDPEKRLTVMKDSTTGAFGVMAAVIVLGLKVVALSEIENYRGLILILMFGWGRWAQVSAIAFYPYLKAEGKGSFHKESFQFPQDLLLGWSVLSLISLLGFLYFNLGIWVLIPSLFGTIIPLLVSAWFQQKLGGHTGDTYGAVVEWTEAFYLCVLTIL
>NC_019780.1|WP_015230191.1|2657749_2658067_-|HigA-family-addiction-module-antidote-protein
MVRVPTHRQPTHPSIILSEEFLEPMAITQTELAKAIHVPYQQINDLINHREAITPRIALRLAKFFRTSPDFWLNLQMRWELYCVQQQEGEEIEQIIPCNSIAIET
>NC_019780.1|WP_015230192.1|2658212_2658908_-|ribulose-phosphate-3-epimerase
MSQKQTVIAPSILSADFSRLGEEIKAVDQAGADWIHVDVMDGRFVPNITIGPLVVNAIRPLTQKPLDVHLMIVEPEKYVADFAKAGADIISVHAEHNASPHLHRTLQLIKNEGKQAGVVLNPGTPLELIDYTLEMCDLVLIMSVNPGFGGQKFISSVTPKIRQLRKICDQRGLDPWIEVDGGLKANNTWEVLEAGANAIVAGSAVFKADDYASAIEGIRNSKRPEPELATV
>NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase
MKKAIITLLGSFGGLGLITPLLALNYSVGEAGINARRLHESPYNLLGRKIAIGQVEIGRAGKFGWDKAANENYPLEVAETLYRDRAANPNQHIDPHAVMVATVMISQKKGLMGVAPEAKLYSTAVGSLRRAGQPEECLASQYTAMQNGGDVRAINFSFGESLDRDPREDAELDGDALLTRCIDWSARVHNVLYVIAGNQGKGGIPIPTDHYNGITVAYSTRRDGEYNKVDFPNLSGEPRGIGRRLVEKEINTEGRTGVSLVAPGSRISVYHPDRDRVRVSGSSFAAPHVTGTVALLQEYSDRALNRLSQLEDTSFPPRWSLDARRHEVMKAVLLNAANKIENPSLEMTNTLYSKQNRTWLQSRAYNDPSFPLDLEMGAGHLNAFRAYQQFSAGQWHSEQSVPNLGWNYGEINVNSNQDYHIAKPLKAGSYATITLTWDRLVELKDQNNNQQFDLGETFLDRGLNNLNVFLISTDHQSEKRVCSSVSEVDSVEHIFCKVPETGKYKIQVQFAEQKHRSKQSYGLAWWTISD
>NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein
MSEREWWVLQWLDLLEKYRFKKRLERGRNYAREGNILRIDFEGAKVTAQVQGSADEPYFLWIKLDAFSEEDWSYVIQSLAEKAIFSAQLLAGEMPQNIEEVFIANGLTLFPFSLSDVHSRCNCPDPKNPCKHIAAVYYELADRFSEDPFVLFQLRGKTREEILAEIRKIRQQNGEEMTEISGEKDSIAADVETTPSQKLTVEDFWRYDQPLDSDLVNLKTETDQTVLEMLGGFPLPSTESQAVKQFLEQIHKTIQSEIVHQANP
>NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease
MPIAIPKGFRITPEQFEQLAKIEQLAKIELTNTGELIVMSPTGGEAGEKNFNLYIDLGIWNRQTKLGKAFDSSTVFILPNGARRSPDVSWMRLDRWETLTDQEKQGFPPIAPDFIIELVSPSDLKSLRYEDLQAKMTEYLQNGVQLGWLIEPSTKTVEIYQLGEAVEVLNNPQTLSGRNVLPEFVLDLSEIF
>NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSAFLLDTHAFIWLSEDDPNLPDFLRERIDQADFVYVSIASLWEIAIKLNLGKLSLKQNYEIIGIELGYSDIIVLPISFRDTALIRHLPLHHRDPFDRMLIAQAMNHSLIVVSRDRAFDAYSIQRIW
>NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein
MNTDLQLWQTISKMPEHLKTELLNYAEYLMEKKANTTHSDQNLEKKQRSGVLKGTFVLPLPEDFDEPLEGFQDYME
>NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL
MAKIVTFNEKARRSLERGVNALADAIRITLGPKGRNVLLEKQYGNPQIVNDGITAAKEIELEDPLENTGARLILEVASKTNDMAGDGTTTATVLGQAMIREGLKNVAAGSNPVAIRRGIEKTVNYLVEEIANVAKPVEGSAIAQVATVSAGNDEEIGKMIADAMERVTKDGVITVEESKSLATELDVVEGMEIDRGYLSPYFITDQERQIVEFENPRILITDKKISAIQDLVPVLEQVAREGQPLLVIAEDIEGEALATLVVNKARGVLNVSAIKAPGFGDRRKQMLQDIAVLTGGQLVSEDVGLTIDSVSLDMLGTARRVTINKDSTVIVSNGENKNDVEKRVNQIRKQLAETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATQAAVEEGIVPGGGTTLIHLAAKVAEFKNQLTHPEEKIGADLVGKALEAPLSQMADNAGAEGSVVVENVRETEFNVGYNALTGEYEDMIAAGIIDPAKVIRAALQNAGSIAGMIITTEALVVEEPQEEEAGGDPSAAMGGMGGMGGMGGMGGMGGMGMM
>NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase
MASASRYNPSEIEPKWQQNWLETEIDRASEDKSKPKFYALSMFPYPSGNLHMGHVRNYVITDVMARWRRMQGYRVLHPMGWDAFGLPAENAAIDRGIHPAQWTEKNIQQMKQQLQQLGLSLDWSREVATCSPDYYKWTQWIFLQFFQAGLAYQKESAVNWDPIDQTVLANEQVDGEGKSWRSGAKVERKLLKQWFLKITEYAEELLNDLEKLPGWPDRVKLMQENWIGKSVGAYLEFPIIGIENKIGVFTTRPDTVYGVTYVVLAPEHPLTPKVTTSDQKPAVEAFIQEVTNESEQERTAEDKPKRGIPTGGKAINPFTGEEIPILIADYVLYEYGTGAVMGVPAHDARDFQFATQNQLPIKQVIVPEGEAVSDTLENAYTEAGTIVNSGQFDGLNSVEGKQVIIDHAEKQGWGKARIQYRLRDWLISRQRYWGAPIPIIHCPSCGAVPVPDKDLPVELPEDIEFTGRGGSPLTQLESWLNVSCPSCGEAAKRETDTMDTFIDSSWYFLRYTDANNIEEAFNQEKVNDWMPVDQYVGGIEHAILHLLYSRFFTKVLRDRGLLNCDEPFQRLLTQGMVQGMTYKNPKTGKYIPSQEVNPDDPKDPNTGDELSVFFEKMSKSKYNGVDPLEVLDKYGADTARMFILFKAPPEKDLEWDSADVEGQFRFLNKVWRLVMEFVEQNEVIDQNADLSKAEKDLRRAIHTAIKSISEDLAGDYQFNTAVSELMKLNNALNEAKCKTSPVYQEGIEALVKLLAPFAPHITEELWHAFGHKDSIHQQKWLEADPDALTVDEINLVIQIKGKTRGTIPVPANASREELEKYARESDAAQRYLEGKEIKKVIVVPGKLVNFVV
>NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein
MAKQLLFYDQVVPVSKEKHGNLSVKTGDNYQFAKQANAIPITLGEFAPATQEYPLVFVENQNSLMPVVVVGLQAEQNLYVNDNGEWQGKYIPAFVRRYPFVFALSDDEKTFTLCVDESFSGCNENGRGERLFDTEGEETQYLKNVLNFLKNYQTQFQATEQFSQKLKDLELLEQMQMRFDSGEDQPSSLSGFFAVNREKLQQLSGEQLAELMQLGWLELTYLHLHSINNFSNVVERSKEAKTNSGTETSTEQELATAQS

Crispr_ID: NC_019780_33

• CRISPR_ID: NC_019780_33
• CRISPR_location: 2707709-2707793
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_33

Consensus_repeat	Method
GTTTCCTCATTCTGATTCGTTTCTG	CRISPRCasFinder

spacers of NC_019780_33

>33.1|2707734|35|NC_019780|CRISPRCasFinder
GAACATCTGAAACATCTACAGTTGAATCTGTCGCC

CRISPR arrays and Neighbor proteins around NC_019780_33

CRISPR arrays

The CRISPR arrays of NC_019780_33

>merge|NC_019780|33|2707709-2707793|CRISPRCasFinder
GTTTCCTCATTCTGATTCGTTTCTGGAACATCTGAAACATCTACAGTTGAATCTGTCGCCGTTTCCTCATTCTGATTCGTTTCTG

>NC_019780|33|33|2707709-2707793|CRISPRCasFinder
GTTTCCTCATTCTGATTCGTTTCTG	GAACATCTGAAACATCTACAGTTGAATCTGTCGCC
GTTTCCTCATTCTGATTCGTTTCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230209.1|2713653_2714397_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230213.1|2715591_2716005_-|DUF1636-domain-containing-protein	unknown	unknown	gnl|CDD|377928
NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173813
NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein	unknown	unknown	gnl|CDD|377801
NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein	unknown	unknown	gnl|CDD|378366
NC_019780.1|WP_015230212.1|2715182_2715395_-|hypothetical-protein	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015230205.1|2710365_2711394_+|dihydroorotase	unknown	unknown	gnl|CDD|235474
NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL	unknown	unknown	gnl|CDD|234573
NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase	unknown	unknown	gnl|CDD|234743
NC_019780.1|WP_015230202.1|2703584_2707436_+|hypothetical-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350220
NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein	unknown	unknown	gnl|CDD|226729
NC_019780.1|WP_015230208.1|2712860_2713670_+|metallophosphoesterase-family-protein	unknown	unknown	gnl|CDD|378975
NC_019780.1|WP_041235490.1|2714437_2714647_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230201.1|2669337_2702658_+|DUF4347-domain-containing-protein	unknown	unknown	gnl|CDD|372982
NC_019780.1|WP_015230210.1|2714607_2714889_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015230207.1|2712105_2712864_+|hypothetical-protein	unknown	unknown	gnl|CDD|379324
NC_019780.1|WP_015230204.1|2709990_2710122_-|photosystem-II-reaction-center-protein-Ycf12	unknown	unknown	gnl|CDD|237469
NC_019780.1|WP_015230211.1|2715000_2715186_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230211.1|2715000_2715186_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	4.06867e-09
NC_019780.1|WP_015230213.1|2715591_2716005_-|DUF1636-domain-containing-protein	gnl|CDD|377928	pfam07845, DUF1636, Protein of unknown function (DUF1636). The sequences featured in this family are derived from a number of hypothetical prokaryotic proteins. The region in question is approximately 130 amino acids long.	1.44641e-54
NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase	gnl|CDD|173813	cd07488, Peptidases_S8_2, Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.52346e-58
NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein	gnl|CDD|377801	pfam07277, SapC, SapC. This family contains a number of bacterial SapC proteins approximately 250 residues long. In Campylobacter fetus, SapC forms part of a paracrystalline surface layer (S-layer) that confers serum resistance.	1.66506e-90
NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein	gnl|CDD|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	5.72072e-16
NC_019780.1|WP_015230212.1|2715182_2715395_-|hypothetical-protein	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.00157361
NC_019780.1|WP_015230205.1|2710365_2711394_+|dihydroorotase	gnl|CDD|235474	PRK05451, PRK05451, dihydroorotase; Provisional.	0
NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL	gnl|CDD|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	3.8403e-46
NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase	gnl|CDD|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NC_019780.1|WP_015230202.1|2703584_2707436_+|hypothetical-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	6.23824e-09
NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.83219e-49
NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein	gnl|CDD|226729	COG4279, COG4279, Uncharacterized conserved protein [Function unknown].	9.93474e-92
NC_019780.1|WP_015230208.1|2712860_2713670_+|metallophosphoesterase-family-protein	gnl|CDD|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	2.42219e-22
NC_019780.1|WP_041235490.1|2714437_2714647_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	2.56784e-15
NC_019780.1|WP_015230201.1|2669337_2702658_+|DUF4347-domain-containing-protein	gnl|CDD|372982	pfam14252, DUF4347, Domain of unknown function (DUF4347). This domain family is found in bacteria and eukaryotes, and is approximately 160 amino acids in length. There are two completely conserved residues (C and G) that may be functionally important.	7.98505e-64
NC_019780.1|WP_015230210.1|2714607_2714889_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	5.15013e-05
NC_019780.1|WP_015230207.1|2712105_2712864_+|hypothetical-protein	gnl|CDD|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	0.00134136
NC_019780.1|WP_015230204.1|2709990_2710122_-|photosystem-II-reaction-center-protein-Ycf12	gnl|CDD|237469	PRK13686, PRK13686, photosystem II reaction center protein Ycf12.	4.72028e-11

Protein sequences

>NC_019780.1|WP_015230202.1|2703584_2707436_+|hypothetical-protein
MAVQYIAESIDYETLDLIPGEEGVVNVSDLSQADDAIAPIDLGEGNSFRFYDTDYASLSVDTNGRLIFGTGNSQFENTNLTSNEITPGIIAPFWDDLRANSGVAEVDSPEDDLILYQIEENRIIIEWNNVHFFDGGQTTDGLTFQAILELNTGDNNGEITFNYGDLSEEDLEENNGTSATVGVKAPGSQTENSLDRTLVSFDQNSPLLGDTEAISLTPNVIEDNAIIITSPVSVDFPEAETDPAYRILTNASDDVTLAYSITGGTDADQFTIDSENGTLTFTNPPDFESPTDANADNIYEVTVNASDGETSDEETVLITVTDEQEAPPTDTQYIASSTDFEAIDLIPGEDNVVTVENLSNTDDEIASITLGEGNSFRFYDSDYTNLTIDSNGRLIFGTGESAFNNTDLTSPEFSPGIIAPFWDDLITNSTAANPDTPEDDLILSQIEDNRIIIEWSNVHFISEGDTTDGITFQAILELNTGDDNGRITFNYVDLSEEEVEENNGTSATVGVKAPGTQDNSSFDRTLVSFNQENPLIGENQAIELTPNTIDPNTIAITSPTAVDVPEETPETAYTVLVNAPDEATVTYSITGGTDADQFTIDSENGTLTFTNPPDFESPTDANEDNIYEVIINASDGENSDEETVLITVTDEQETPPTDTQYIASSTDFEAIDLIPGEDNVVTVENLSNTDDDIASITLGEGNSFRFYDSDYTNLAIDSNGRLIFGTGESAFSNTDLTSPEFSPGIIAPFWDDLITNSTAANPDTPEDDLKLYQIEENRIIIEWNNVHFFDGGQTTDGLTFQAILELNTGDNNGEITFNYVDLSEEDLEENNGTSATVGVKAPGTQDNFSFDRTLVSFNQENPLIGENQAIELTPNPIDPNALLIIGPRFVTFLEESAGTPYTVITNSPEAENLTYSISGGADADQFTIDSESGELSFNTLPDFESPTDANEDNIYEVSLTADDGETQATQDLSIAITNQQEQTGQPPNLEASNLTVDLATASEGTVIGTLNASDPNSNPLTYAITEGNTDNNQNGTSPVSVNDSGEIILQDIDDLTSNLATTFTFTATVTDTEDLTDEAEITVDLGVETATPSSVFGSLVFGTLNNDQFNTSDLDSLETDQDKILFFGAGNTSLEGTEGEGNNRIYLGAESDTVLATAGDRVFTKQGNDQILVGANNRIYAGEGDDRLFVATEGNNVLRGGNGDDQFWIANGNLPDSANTITDFTSGEDVLGISGFPNIAFDDLSLNSAGENTVIGFDPETPLVELQGIEATSLSAEDFVFLS
>NC_019780.1|WP_015230201.1|2669337_2702658_+|DUF4347-domain-containing-protein
MPLEIPVSEVSFSSPLTQDLDDPNSPSKKSSALEKWDSEKLIPLDNSASGIVFVDSTVSNADSLLANLEADTEVIYLDSQEDGVEQIAQVLGARNNITGVHILSHGDVGTVQLGNTALSAETLSAKEETLQQWGNGLSPNGDILFYGCNVADDSGEGFIQQISTLTGADVAASNDLTGNDGDWELEAVIGEIETDIAFTEESQAAYTSSLFLTDQVQLDTEEKQINFQTGKREANDDELYLSVNENDLLTYSFDNSNFITDFNSEQGQQNLSISKFQEENYQIKASFGLGDDTLSIDASLAEALNNGSAVTKWNINAIDAGSIDAGDKTNIIQFSGAENLLGGSGEDQFNLATNGVVNGKIDGGDNSNNDSLTYENYDGAVTVNFGLNRATGVSEFANLNNFVGSRVTINPELSTASTPTAIKSADRVQVGDRIYEAQTDIAPALGLDVDYTLEDSPNLIALGDRVQTENGKIYQAVAVIEPNSGTVDLSQQDYSNPSKWFEITVDLSDDQQNYENNENWQEITNRVIGDDVDTNWQIVGEDEIAVNGFSLSNFSDISGGLGEDTITFQDNSRLTGEIDGQEQGIFDYTTNSASPQVIPTGSRVLLDDGRIFEATQPIGFPPLGNNQTQYETTDTPQIIKAGDRVQVGNNLYQASEGITPDDSGSVNLTAENQDYFNNESWERLTISLADQDYENSDNWEEVIITGDTIDFSNYNTAIVANLEKQTIINNSTDQPLTSFRNIEQITATDSDDDQLIGPQENTQWRLTANDRGTVTGIKFNNFTRLKGSDDNRDWFVFDTFNHEFNGTINLDGGANGVDQFATLDDNKNYVPANQSGKGTTDEIVSGLTINYQGLDAFQTASSNGNTLNITGTPLADELTLANESGNLEIRLGNRVTTPDLSNVSEIAIDLGGGNDEITIATAGFTFNQDLTLKAGLGSDEIKITENLFLNQKNLSLDGETITVDPNVTLSTQSQGQAGNISLTGKTITLADGVSLEAKADNISNSGNIKISAAESEVLSPVNNSPVIFSRKTATVAIGEGVNIFGGKIDITATANDKGFLAALGASSLANNFLIAPLTKKLSGLADLGLPVKVVQKSSTADIDIGDGTNIKGDGYVTIKAKAVTNSSGKATNKLVSVGYTNAQPTADITFREDNDDATRTTVEAGGPLLVHADGKAVSKITTKTNKKLGEPSLAETALSLAVSNSDLTSQVTVPANVTMTAGKTANILATGDNATDASATSGLFANGLAGMAFGLGFSDAEVKAAVDGQITANQESGAVVKMEFDPTEDGVIDFDRNTINMAKALGNETPRVIAHALKTGDKVNYSNRRGNSIGGLTDEKDYFAVVDPNNPNEIYLAPSLAKAREAGSKLQAGETPQVISLTNPVSQLTGEVVDLAAKDFSIAKDFGITDIALNTKTFDPESAIEDSAINLDNSGGVEDLVTSLDYSVSDFAIHGSTFELGQAVRYSKGDESNTAIGGLEDGQNYYVVASTNEKNLEGDKRFVTEQTIKLAETENKAHAGVFIELDPSVATGDNHSLRALHVLDTGLVTGLGVVADLESSNDVASEAGLEEQEEQSFDPNQKTSKLDKTRNVINTSVGNRLFQVLTEAFSESTATERAEKQTGSNSKLSLAGSLAFLNTDHKSLALVGELDDEGKDFDEAFDGVENETDTAQAKLQSKEDLEVTADITESMSLSAESSNEPQDGDKIKTENADTKNPQIAGSAAVLVNLQNNQAKAIIDPQAQLDAHRALRVTSDVSYPYLTRPDEIIPWTSGEFLDQFKDEGPDALLRYLDFGSELQSIFNTWARSTAKADDGKDAIAGAVNFLDFDNNSLAIVREGAKLNQDTDFRNPAGNETVSVEATNYMQMLNVTGLFDFGLPSLNLDVLSLEAEGDKGSLGFSGSSDQRGGYGGALYIQSLENTTLAFIESGASIYTGGLGGVNMKAEEAILNLGFVQSGAVAGSFGVGGSVAYSYQESNTLAHLASGAIVTSGRINDESVSDEKDVTGSPLTIYAGSLETNINWVGGVAKGRNLGFGISVGINDITRNTRAIIGEEADESVSDETSTLDITGDINVKGKVDGGIYAFVAAAAAAGDLTEPDDNTEGNTSESDVEGKDGEGFDYGVGVSANASVNLVEDNVVASIYDAGNLNAQNVNVLGLNQTDLWVLAAAFSATLPSKKAEEDEQNTATIAGSFSFNQLKGETLAYIQGKNGDRSLKTAIAGDTAITAERKGMIRGATVGFGVKTQEKDGNSLGLAGSVAINELSNRTDAYVANVADLAGDTYSLTITAQDKTSIFAIAGALSIGDGGNNAGVGFSFASNRIDSDVTATIENSLLDQLQTVQVITRNEAEIIAFTTSGALATSEENDSQLAAVGAVAINTITGQGKASIVDNSTVTSQGDVRVKAFDLASIKAVAGGAALAASLGKASAEEAKTSQNSGRAAAGAALAINNIGKTRDLEFNAGGDVDVNADTFSFGESHGLETGDAVTYNAGEESVALAFDANDAIDPGNNTIDFGTAHNLVTGQKVAYNSGDETTIGGLTDGAYYVIVTDQQSIQLATSAESAKAGDAIDLTATGSGEQLITPDRLAVAGLEENQNYYVIKTSDTTLQLATSEEKAQAGDAIDLTREGAGTHSLTVATEAQTSRAEISNAQVTATQGNVTVEADSILDETIAFNPRDQLVKPVLAFDAGEGTVDLDANVITIAQHGLETGQEVVYVGNGGSDSEDSGNIGGLASLETYHVVKIDADTLALAKSVEDANNDNYIDLTSYGDGLVAHELQFVQSSPVNVNNDTLYLENHGLITGQKIGYDKGDGTAIGGLEDNQDYYAIVLDDNVIQLATSEEAAKQGQAIDLTSLGDGESHSFSYGRLASIASLTLGGAVAGGEGQGGTGFSVSGAGAGSYNAIYKSITAVITDEATVEAGNGDVRVTASDHSRIVASAGGVGLALQVGKNENAIAASVGASVAANVISNDLVANVTKATVSASQELIVTADSEAEIYSLAVGGALSAAKGQNALSLSGAGSAAYNAIANTVEASILDGATVNAGQGITLTASDRSRILTGSGAAAAALAIPASGKQGVSGAVGVSISVNDVDNRVRSIIAGEGTTVTSNAGEIELSSESTAQIDAFTYAGAAVGGTLAGVASGASSFNRINNTITASLEKQATVNAGNSVSVTATDDAAIHAFVGGGALGIAGGKGDKFSGTIALAGALAINTVDNKTHATIENGTISAATEENPIDLNVAARSTGSITTVSTAISIAITAAKDKGLAISGAGAGANNVILSTTEAFITDSTLTPDDINHLNLTAENQAKISGNVVAVSGSGAGGGSAAVGASLARNLIGWESDFTKSPATVKAYIRNTAVKITGALSLEAIAEEDIEARVGAGAVAVAGGKSGGLGLSGSGVLTENRVNTEIEAFITGNENISIEADAISLNAEETPYINAQAGAASVGFAPGKAGATLSLGGTLAINDISNQVLAYVSDVAQLTSTSGDITLSADTSNKGVGNLPTEFNPNLLDRVAREDDLGTRQTLRQELTNIGVDLAPTSHGYQSSDGEVEGLLPNARVKHEGTVYAYQGEEVEGTIDLSNQAQDYANSDQWQVVDDLEVSILDAGSEWSVFDGETTYILKQENGEIEAYRSGINAVSVAASIGAGFGNKAGVAISGAGASANNTITTKTNAYLDRVTTVNSANNVSVEATNTTGITARIAGASAAIGIGSKAGVGASIGVGLARNVIGQSLLSDLTQGEDYDYVLGQGEQEITIKQGDKVYIPDGIRGGEVYEFIGENEDGETIDLSTTDYGNRDAWRLANSQANAMEVRAYIQDADVTATGNVGLKAVTENSIDAGVGAGSIAIAGGKGGVGLSGAGAAAENTINTDVQAAIEGNAETGVTARGITLQAQDISAIKADVAAASIGGAFGGTGVAITLGASLAYNQIDNTVEAFFKDIGKGVTATNGAIFIASEQGATIEAKTIALSFGASAGKVGVTISGAGAIANNVILSDTKAYAENSDLEAQLINVNANSIGEINAVVVAVAGAGAAGKVGVAGAIGSSVARNLIGWESDFSQSPAQVQAYLKNSNVDADSNLSLSAIAEESIKARVGAGAVAVAGGMVGVSVSGSGVLTENKVNSDIKAFITGNEENTIEARRISVVADETATITADAGAASIAGAVGKVGASVSIGASLAFNDIRNTVEAYISDLASVTTSSGDINVLATSQGRELETIDAETLAGEDDNLRKTLRDALFDKDFNRLRDALTGEDEAADLSFRKTLRQALTDAGIDLVETRYGYESSEGKVPYLLEKARVKDDGKVYEYQGEAPFDYTSADGTQTIVSGDQVLVDNGEEITLYRYNPPQSGSSQEIDLAQEDYAQSSVWEKVEIDPIDLRNQDYTNSDQWQEVDDLEVTALKAGEEWSVFDGENSYILKRNGEDVKVYRTAIESVSVAASVALGAGLAGVGISGAGAASNNTVNTKTNAYLENVEQVTSAGDVNVKATNSAGIVSRVASASAAIGVGVKAGIGGSLGVAAARNVIGQSLVSSLIENENYDHTLTDGEKEVKPGETVYIPEGIRGGEIYEYVGETDTLDLGNADYGNPELWRIANRESSPMEVRADIQDANVLAEGDLTLEANLETSIDAGVGAGSIVLTGGAVALGLSGAGGAAENTIATDVKATLAGDDQQAITANSINLEATDTSSIKSTVAVLSLVGSFGVFAGGATLGASVAYNQVDNTVEASITGQKVTATEGDIRLISEQEGSITGNTVAVSAGLSLGKISANLRGAGAIATNITLSDTEGFAKDSQLMSNNGAVTLIANSNATIDATVVGVSAGLGGGLVGLSGGIGSTIARNLIGWEVALTKAPAKVRAYLDNTSVTASDDLTLTATASNRVISSVGSGAVSLAAGAGGFSGSASGVTTENRVNSHIKAFISGQDQATIEAQAIEITAEETPSVKSEAGAAALAASFGKIAGGASFAGTLAINDVSNEVNAYVENVAGLTTTADRINVTATSQGKKLGTLQTDLNADDFETAATEETLQLRQEIRNALTAAGLELASTSYTYEASEGTVENLLAGTRVKKGDRVYTYVAGPNYDHRSFDGEKTVKNGEKVYVPNGRSGKIYQYTGQEDTLDLSAIDYSENKAWQPVSTQPIDLNAEDYDNSQRWQEVDDLKVKTLEDGSKWSVFDGETTYIVELTDGEFQVGESAIDAVAVSASLAAGLATLFSPTPAALATGVAVLSGAGVATNNTITTATNAYISQSTVDSAKNLNVNAFNNAEIISTATASAGVAGVAIGTVSVGGAFAGAVARNVIGSPLLSDLITDGLTGSEPLVEGEDYQHTSNDGKQTLTPFQDRVLITDGVRKGEVYSYVGEEEVEIDLANTNYGNRDLWQLVAQEQESTDMEVKAYIEDSQVTVTDDLKVKAVMANSIDAGIGAGSFAINGALAAANFSGAGATAENTIAAQVEASLDGNSETTVSADNITVEAQDTAAIKADVVTPVVGAAVGVAGGSVSIGASFAYNQINNQVEAKITNAKAITARQNLRINSEQAATIQASAIAVSVGLAGGGVNLSIRGAGAIANNFILSDVKAYAENSDLTANQLQITADSRNQINATVSASSGALGIGGGAGTAALGASVARNFIGSGSTGGFFTQPDSAAVKAYLNQTSVDVDGVLTINSNAEHNIDALVITPSVAVTAGLAAGLGVSGAGAITENKINSEIEAFINGGKSISASTVTITADDNSTINAKTSAVSVSFVASVAASVAVAVGAAIANNEINNAINAYIANAEVTTQVGDVTLQAKETATINALTFSAGAAVSLASSGIAPATAVTNAVNQLNNKVNTYLAASTIEAAGAVTLSADDTSKVDAETKAFAGSGGVFSLAAGVVLAQNEIGNDTTAYIANSTVTAGNGISVTATANPTLDTVSQVGAIAIGLGASGTGGRAETIINGTTLAYVDGSNLTATGNNIIVNANATTNANPKLQSLSVGLVGITVMKSFADIGGATRAYLTGTSSVEAQKLDIQATDTVNAEPVTEVGAGGAITITKNFSTIDVTRETEADVRAGGDLTLTQGILNVKATSDVSGIAKTLSNTVSPKVNIGNLTVKTTLDNTTRAQIEAGATVRSNQEAVNVIANATNTAEASIESLGVGLVLAVSDSEPTAKVKSTTEALAQGIITGIGENGKVGNVVIEATATDQATAGAKTKGGGQISVSDADVKAEVTSSLNALGGGTIESANNVQIGATGNTDADADAESSSGGVVEVSNLEAIATSNPTINADIGLDATLEAGQDIIINAVHGEDSPTFSDGSFDASSAVNQSANTITFNDKHGLLTGDTVTYNQNGQSNPVGGLTDGREYGIIQSSDRALKLGVTVNSLDSEDNPLIDINRDTIHFTAKHNLEDGDRVIYTPEKAVIGGLSSGSTYEVNKIDDNTIKLIDPNNPPAAPETFSGSNITSNTITLTNHGFSDGQTVTYRAPKGSEFSSPSVDVTGTGDNPLAEADNNNIYLGSGHGFQSGDEVIYRSEGNTIGGLQNGERYFVIFDTAKPEQIQLAETYEKAVGVNDDNGTPDDPSDDTVIPITPIELNPDKSPEQETVIHSLLKVSDQPIGGLTDGLTYYVDRVNNNEFRLQDNNGNTINLDGTDPEDSSVTLTGNNTLATEGIDLTNPGSGSHELVLDITSQGSNTQRLEGIGGARALLSAPSGDGVVTASASGSNGGVVRVAEAKTTATANPTINIEIGDRATLSANNIDVDATAKGNIAASSAQSGGGLVSVGDAQATGNLNTVSDLTIGEKATLQATNDITLNTTTQQDTKVLAESKGGGAFDFADADITANLDYSSTIDIGDRSELEAENLLEVDANSQVEINADAETDSGGLGAFADTGADVKIGNSSKDRAKTTTTIGSQARLQADTLTLLAETTKQDALVKAESDAGGAGADAEATANLDIFDNVQVSLEDNAGITGTTVNIQARHSGVNIRSDANADTDALYGDADAKARTDYDSNNAVNFAQGATIATGDLNVTSTQTVDEYSRSAGADKDIFGSESELETGNFNAGRTINWNGDVVFLSSEAARLKVSGTGDLVKAENVTAKVSDEAVTVDPIINQTPVSNANFTIGETKANGKTAPEGVITGDKGKFSASASLFPKVELINESDRDFIINDITLAKVNQPQITIDAPKNELNFAVEDRIQDLLEQGITVTVTNDGSGDVRFQRLLNHPIGAIEVNNTNGNIETSDQGILRGNEITLNTDKGGVGNEKNPFAVELVRSNGKQTDLDVNAQNEIWLDVKGRLRETNVESAEFEGSKIETPADVNLSFQPSVQETKATGGFQGVKVITGENEETIERSYPKDENQNNQSGLNLGLFAETKQAQSISSGFNLEQIKGQNINLEAIQDTRIDLTANTDHAKDGDIEASFTKGDITLTETNGDFLLKNIRSRIGNIDLTAAEGNAEAVTVETDTGNINLLASETVNANLIRSTNAGDISVTANDGNVEAVTVETDTGNINLLASETVNANLIRSTNAGDISVTANDGNVEVVLIKTNAGDVNLSAGGNTGAIFETNSPENGDNGATPFVIGDNITLNATAGIGTPDDFLEMDSSVASNGEVNAEANDSIFLTETTGDLRLGGIVSNNADISLLTEDGSIRDGEDDPEADLQASKLDLIVNGGGIGNSNNKIEIYGAGNGQTQNSELQLSTATPEPGRLYTVATNDIYLQQVNGALDVMGVTSKEGRVNLSVLDGAQGETENFRLLPEGDVPLTETEDLIATYNFERNANDQTGNGNDGQLTNGAEITQNGVKLDGNDDYVNLGTPDNLVLEDSFTIEAWIKPDANFQTNRFGEGGILINKEGEYEIARFADGTIRWAFSNRSPGWTWINTGYVAPAETWTQISVTYDQGTIKTYANGDLVHTYNGSGNITDVSSQDEVRIGGRQGGAPQYFTGLIDSVRIWDSVRTQEQIKNHYQGRITAADDVEINVGDDIELPATTLIEAKGGTATATLRGDFNSQDENIGSTFTIIGDVQATDEVIFSGGEDIDHLQLLGTKGVNANGNTRLKGGDSDDRFYVQGTSSSLTLQGQTGADRYYFGTNASKALFSPNGVFNDDNALAVLNGDLSAIDADVTVATGVGGNRSTRDVVYVKGQGGNSGQITASQNAEAIVSGFSNMTGSVKLQVPDGGKNSSFLKIGLGDNNNQFRVKGLGAQAIAEIYGQGGDDTFNIGDTNNALDKINGVVAVYGENGKDTLNVFGDGSKTGDDPNQLTAIGVTGLGMGTNALLSTHNRFGAGYDIGLNQYPGAIYYGERDQNRNTSGINYRFYQGDFKRVADLTEDHLQEEGNLTAKELSKVGGLSQQLGEQKDKDDDRFGLVYEGFINVPESGEYTFYTRSDAGSTLSIDGELVVDNDGLHGRDTKDGTIELAAGYHPITVKYFENGGGELLKVEWEGPNIERQTLSPQSLSQSINNTFQPEVETVNINLGENADRFTVDSTSDNVETNINGGAGDTIIVNSTDTGLEPNQLDRVDFIRGEVNLSGETLILNDAGDDNANTGIYRNGTVEGLDMPGRLTFSNANTVEIRLGLQQDTFYVPETNAGLDTTLKTGGGFDTVYVGTEAGQENEGSLANIKGKFTVDGGGPAARDILYLNDQNNNNGKTYTVSNEITGIKSLVSGDAWPVDTTTVKREDTAAIDYLNVENFVLNAGGAKDTIDIQGTHREQDVKGGKGSNFIVNAGLGEDLIQVGEPVGNGERSLENFAIDLANPMANISGVNYRFYQGNFKRVADLTEDHLQEEGNLTAKELSKVGGLTQRLGQDKDKDNERYGLIYEGFINVPESGEYTFYTRSDDGSTLAIDGELVVNNDGLHGAETKFGSIDLEAGYHPITVKFFENGGSDTLSVEWDGPNFDRETIDPNDLFNPSSHTGKGIPVMIDGENGEDTIQVLNNANDTNTSVSASNVGFADLFPVNEDAKEDDDTNNDGISDRSFNLYNSVFGENPTFSNYGRVALTEEGQRNPININARNNEAVRVSLGKGDDTIEAGNSNRPLDYDFTVDGGDGDESFGIDNVAVTLSPSITFNGQGGDDLVFANFAEGVPTTAPLDFTFNGGTSDQEGDKFRLSGDGEIKDGQYVPSATVDRTGEVSLADHQFNLTNVEPIVVHGFPDFQVVTPKNAPSDLSLDATTVGDLEVSQVDRQIVTVDGVVSWNQEDQLEIKELPEPRYLSGAVANETLESSAMAVDGDTLVVGAQLDGVDYGAAYVYQWQNDAWQQIMELTPRDKEEAGQGFGEAVAIEGNWIIVGAPSDNVNGTNAGAAYLFRKGDGGWQQVQKLTPNNANANDAFGTAVDIDGLSAVVGAPGTGNNDNNDTAYIFAETQQWNQTASWTDANTDLGRAVAIDGNDVVIGLPEANEARVYNRPRRRNANWSLQDTLTPSEPDQGEAFGHTVALDSDRIVVGAPLWDGENIGQGRAFVFDRAGDWTRSARLTADGGLPAAEAASEGRAGDRFGFSVAVDGDYVTVGAPGYDANATDVGAAYVFREIADQGSLNGSTWVRSTGATGSGRLMAQSPAGGDPGDAPLPDHFGGAVAITGNRLIVGMPGFNDVNDNNQIIRPDVGAFRTFITDDKLPPVTNPSLQAETLDITGSEIHYDQGTKTLFVADENSNRVISYVNEGLSWRPANTFTGGSGFGADIDSDGSCLVIGAPGENRVYTYTFDGNDWDNNRSILDGGNYGYGLFGSSVAIDGSNLAVGAPNAQLNYYSTNRADNNHEINLGNTGVVYSFDLNENNNSWQRDRVLMPYRNNMPEKTSRREKKVDEGWFLDNPGKGYESIGSNRNYIQIWEDEFSDDNDIFAKGQIPDLEYRSESNDDYSSIEVHRGMKLVVYQHNNYRGYRYSFAGYTRLAFNGRWEFWDDQISSIKVYERYRKVAYPIERESYDQLDNSKWGAELDISGDRVFVGAPGEDAVAVYDVNDNDKDNWRVRVAGNQAIKPTLPFDLNDERGSDLGSAVAAYNQNLFYGGKPTAKDNVYTYDLQKDKQGSVKDTLYDSGLRQSKGFGETITISGEEMLISNPLKDNEAGTVYLTDAKSGEYKGLTLKPYRQQARQEGSKETFEISDGSGWTTATSDSNGHFSNFLGRFGQGQRTSKTFDLDGKAATIDFDFYRIDSWDNENFRVYLDDEIIIDQRFTLRKEYTEVITGTKNGISWTITPQNDYGQRAFRGWEDQSFQISLRIPEGKEEVKLGFGSILDEEVNNESFGIDNVAVRSEGELKYQETFEVSDGSGWSTPASDGNDHFSNFLGRFGEGQRTSKTFDLDNKAATINFDFYRIDSWDNENFRVYLDDEIIIDQRFTLRKEYTEVITGTKNGISWTITPQNDYGQRAFRGWEDQSFQISLRIPEGKEEVKLGFGSILDEEVDNESFGIDNVEVIFDNNDTTSNRRFGADSSLISEGHYLVASDPTDKNLEATIYNFRQRGPEWNPIDVSVTPERLDTAKFGVSVDIDGKTAVVGAQDYDDTGAAFIYTKQDDQWTLKTTLQPQTLEIGDKFGSSVAIRNNMVVVGAAQANNAYVFERLAVREESNSNQVKPAWRQTNLIEGGNVNSFGAAVDVDTTRMVIGAPDSEKAFVFQKSLSNKGLNWNLEHTLDSNANDFGAAVTLDQETIAVGAPAAGQVQVYDLDKIDSPDTLNIGGNSDRFGHAIDLSGDWLVVGAPGDNNDTGTAYTFQRDNNQWQQYQGININSSNTGDFFGHDVAIDNDKIVIGAYGHDLDDKTDSGAAYAYGYKGGKWGLETAQTPLGGEGAGLGDGDQLGYAVAISGSLAILGAPQLEGRPGNAIDTNGAGRIYFRDVSEPRNIEITEVNRTVVEGDEANVLKGTLGDSDVEIPDFNFFDIGEVTVELGDAADRFTVEEPGFTAVGLQHFTVETNDGDDEINIKSDNVGTPSNGQFIYTGDNPENLQNGRITSELEAINGETQVKAGSNTTDRFNVEADADLELTKGKLTVNNQDEVKIAYAEDISLKGGDGDNVIKASSWYQNGNVSLDGGNGSDQVEANLSEVPTRNLKDSGKEGNDQLLLFGNIVREIKGNNRNYLSTVIPSDYKTKTNVKKFTTRNTLYEDFEGVFNGNNDNITGVDNAQTLALNNVNDDLLNGN
>NC_019780.1|WP_015230200.1|2668107_2668887_+|SapC-family-protein
MAKQLLFYDQVVPVSKEKHGNLSVKTGDNYQFAKQANAIPITLGEFAPATQEYPLVFVENQNSLMPVVVVGLQAEQNLYVNDNGEWQGKYIPAFVRRYPFVFALSDDEKTFTLCVDESFSGCNENGRGERLFDTEGEETQYLKNVLNFLKNYQTQFQATEQFSQKLKDLELLEQMQMRFDSGEDQPSSLSGFFAVNREKLQQLSGEQLAELMQLGWLELTYLHLHSINNFSNVVERSKEAKTNSGTETSTEQELATAQS
>NC_019780.1|WP_015230199.1|2665199_2667758_-|leucine--tRNA-ligase
MASASRYNPSEIEPKWQQNWLETEIDRASEDKSKPKFYALSMFPYPSGNLHMGHVRNYVITDVMARWRRMQGYRVLHPMGWDAFGLPAENAAIDRGIHPAQWTEKNIQQMKQQLQQLGLSLDWSREVATCSPDYYKWTQWIFLQFFQAGLAYQKESAVNWDPIDQTVLANEQVDGEGKSWRSGAKVERKLLKQWFLKITEYAEELLNDLEKLPGWPDRVKLMQENWIGKSVGAYLEFPIIGIENKIGVFTTRPDTVYGVTYVVLAPEHPLTPKVTTSDQKPAVEAFIQEVTNESEQERTAEDKPKRGIPTGGKAINPFTGEEIPILIADYVLYEYGTGAVMGVPAHDARDFQFATQNQLPIKQVIVPEGEAVSDTLENAYTEAGTIVNSGQFDGLNSVEGKQVIIDHAEKQGWGKARIQYRLRDWLISRQRYWGAPIPIIHCPSCGAVPVPDKDLPVELPEDIEFTGRGGSPLTQLESWLNVSCPSCGEAAKRETDTMDTFIDSSWYFLRYTDANNIEEAFNQEKVNDWMPVDQYVGGIEHAILHLLYSRFFTKVLRDRGLLNCDEPFQRLLTQGMVQGMTYKNPKTGKYIPSQEVNPDDPKDPNTGDELSVFFEKMSKSKYNGVDPLEVLDKYGADTARMFILFKAPPEKDLEWDSADVEGQFRFLNKVWRLVMEFVEQNEVIDQNADLSKAEKDLRRAIHTAIKSISEDLAGDYQFNTAVSELMKLNNALNEAKCKTSPVYQEGIEALVKLLAPFAPHITEELWHAFGHKDSIHQQKWLEADPDALTVDEINLVIQIKGKTRGTIPVPANASREELEKYARESDAAQRYLEGKEIKKVIVVPGKLVNFVV
>NC_019780.1|WP_015230198.1|2662927_2664607_-|chaperonin-GroEL
MAKIVTFNEKARRSLERGVNALADAIRITLGPKGRNVLLEKQYGNPQIVNDGITAAKEIELEDPLENTGARLILEVASKTNDMAGDGTTTATVLGQAMIREGLKNVAAGSNPVAIRRGIEKTVNYLVEEIANVAKPVEGSAIAQVATVSAGNDEEIGKMIADAMERVTKDGVITVEESKSLATELDVVEGMEIDRGYLSPYFITDQERQIVEFENPRILITDKKISAIQDLVPVLEQVAREGQPLLVIAEDIEGEALATLVVNKARGVLNVSAIKAPGFGDRRKQMLQDIAVLTGGQLVSEDVGLTIDSVSLDMLGTARRVTINKDSTVIVSNGENKNDVEKRVNQIRKQLAETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATQAAVEEGIVPGGGTTLIHLAAKVAEFKNQLTHPEEKIGADLVGKALEAPLSQMADNAGAEGSVVVENVRETEFNVGYNALTGEYEDMIAAGIIDPAKVIRAALQNAGSIAGMIITTEALVVEEPQEEEAGGDPSAAMGGMGGMGGMGGMGGMGGMGMM
>NC_019780.1|WP_015230197.1|2662509_2662740_-|DUF2281-domain-containing-protein
MNTDLQLWQTISKMPEHLKTELLNYAEYLMEKKANTTHSDQNLEKKQRSGVLKGTFVLPLPEDFDEPLEGFQDYME
>NC_019780.1|WP_015230196.1|2662129_2662513_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSAFLLDTHAFIWLSEDDPNLPDFLRERIDQADFVYVSIASLWEIAIKLNLGKLSLKQNYEIIGIELGYSDIIVLPISFRDTALIRHLPLHHRDPFDRMLIAQAMNHSLIVVSRDRAFDAYSIQRIW
>NC_019780.1|WP_041235877.1|2661454_2662033_-|Uma2-family-endonuclease
MPIAIPKGFRITPEQFEQLAKIEQLAKIELTNTGELIVMSPTGGEAGEKNFNLYIDLGIWNRQTKLGKAFDSSTVFILPNGARRSPDVSWMRLDRWETLTDQEKQGFPPIAPDFIIELVSPSDLKSLRYEDLQAKMTEYLQNGVQLGWLIEPSTKTVEIYQLGEAVEVLNNPQTLSGRNVLPEFVLDLSEIF
>NC_019780.1|WP_015230194.1|2660551_2661346_-|hypothetical-protein
MSEREWWVLQWLDLLEKYRFKKRLERGRNYAREGNILRIDFEGAKVTAQVQGSADEPYFLWIKLDAFSEEDWSYVIQSLAEKAIFSAQLLAGEMPQNIEEVFIANGLTLFPFSLSDVHSRCNCPDPKNPCKHIAAVYYELADRFSEDPFVLFQLRGKTREEILAEIRKIRQQNGEEMTEISGEKDSIAADVETTPSQKLTVEDFWRYDQPLDSDLVNLKTETDQTVLEMLGGFPLPSTESQAVKQFLEQIHKTIQSEIVHQANP
>NC_019780.1|WP_015230193.1|2658992_2660585_+|S8-family-serine-peptidase
MKKAIITLLGSFGGLGLITPLLALNYSVGEAGINARRLHESPYNLLGRKIAIGQVEIGRAGKFGWDKAANENYPLEVAETLYRDRAANPNQHIDPHAVMVATVMISQKKGLMGVAPEAKLYSTAVGSLRRAGQPEECLASQYTAMQNGGDVRAINFSFGESLDRDPREDAELDGDALLTRCIDWSARVHNVLYVIAGNQGKGGIPIPTDHYNGITVAYSTRRDGEYNKVDFPNLSGEPRGIGRRLVEKEINTEGRTGVSLVAPGSRISVYHPDRDRVRVSGSSFAAPHVTGTVALLQEYSDRALNRLSQLEDTSFPPRWSLDARRHEVMKAVLLNAANKIENPSLEMTNTLYSKQNRTWLQSRAYNDPSFPLDLEMGAGHLNAFRAYQQFSAGQWHSEQSVPNLGWNYGEINVNSNQDYHIAKPLKAGSYATITLTWDRLVELKDQNNNQQFDLGETFLDRGLNNLNVFLISTDHQSEKRVCSSVSEVDSVEHIFCKVPETGKYKIQVQFAEQKHRSKQSYGLAWWTISD
>NC_019780.1|WP_015230204.1|2709990_2710122_-|photosystem-II-reaction-center-protein-Ycf12
MEALTSFLGNVNYEVIFQLTFVALIMISGPIVIFLLAVRGGDL
>NC_019780.1|WP_015230205.1|2710365_2711394_+|dihydroorotase
MQHLTISQPDDWHLHLRDGATLKAVLPYTVRQFARAIVMPNLKPPIRSVTDATAYRDRILAAIPEGEQFEPLMTLYLTDNTSPDEIFRAKESQFIKAVKYYPAGATTNSDSGVTDIRKCDRVFEAMQEVDMPLLLHGEVTDHDVDPFDREKVFIDRHLIPLKQRFPNLRVVLEHITTSDAVQYVLSASAIAATLTPQHLLFNRQALFQGGLRPHFYCLPILKREEHRQALLQAATSGNPKFFLGTDSAPHTRTSKETSCGCAGCFSALHALELYAEAFESVQALDQLEAFASFYGPDFYQLPRNTKQITLSKTTWRVRDQVPLLESGIVPLGAGREMTWHIV
>NC_019780.1|WP_015230207.1|2712105_2712864_+|hypothetical-protein
MSSPSLIAVAGPSGSGKTTWISQYLKQPATPTYYLCPGLGNASVDLASIDYRFPWIQTIPDTEAQTILSRLSEETVVYVELGFYLDLASPVLTSFPCHRVAVVPPETESSQWHNFADEIITGNSVQSSRYGDSPQIWSSPLTGQVFDPPSLETIWMEIIGGAYGQVQRAKGLFELPDGTLIQMDFVDALPGSEYRELNVPRWLEGRPNRFSGIEVVGWNLEESTIKQILLESCLSDHALSQYQSYYQETIAL
>NC_019780.1|WP_015230208.1|2712860_2713670_+|metallophosphoesterase-family-protein
MKLAVMSCIHGNYEALTAVLSDIEAQKADRVYCLGDLVGYGPYPNEVVELIRDLEIPTCQGCWDEDVVEGLDACECSYPSQIAEKRGKVAHEWTNRVLKSDVRDYLANLPMILKEDNLCFVHGSPNSQHEYLLPDTAGLIALERVLSTGVDTLFCGHTHIPYVRELDNMKLSVQVQQPEKMSNNTLTTPMKRIINAGSVGEPRHGKPDATYVLYDTETEEVTLREVPYNYTATCLAILEQGLPPIFAWRLARGLEFAEKADDPTHVCQK
>NC_019780.1|WP_015230209.1|2713653_2714397_+|hypothetical-protein
MFVKSEEAGTMTQWAILSGIEGNLQAYEAVLADIKGQEIPVTAIYILGDSIGLQGDNEAVVQRIQFPYADEVKPQVCTGWWEEQCFNLYALSGFGEAPELRDRYGTDAILKLWESVSRETVQWLRSLDFGFHEEDCLLIHGSTVSYDDELTPETPAIQICDRVLRAEAETLFCARSGLTFTYSVERASLDSSTRTLEKTQQTSQETLASCRVIGVGNVGQTPQRATYTLYQPLTKQVTFQTVDYDSH
>NC_019780.1|WP_041235490.1|2714437_2714647_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSSKKAIKVLERLGFKQVRQTGSHVVMKKNTEEGKVGCVVPLHSELKVGTLSGILKQAQVKAEDFIENL
>NC_019780.1|WP_015230210.1|2714607_2714889_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MTNEGQHTKTRSFTVILYKEDEMYIAECPEVGTVDQGETMEEAINGLKEATRLYLEEFPLPESSPKFFTTIEVSKALSYHESLARRQSRYWNA
>NC_019780.1|WP_015230211.1|2715000_2715186_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MKRNDLIRYLQKAGCELLREGGKHSIWWNPKTQAKTTIPRHREIRDILAKKICKDLDIPPP
>NC_019780.1|WP_015230212.1|2715182_2715395_-|hypothetical-protein
MATQFTAILKKDGDWWIGWIEEVKGVNAQEATKEELIESLREALQDILELNREEARREAIDNYEEVFITT
>NC_019780.1|WP_015230213.1|2715591_2716005_-|DUF1636-domain-containing-protein
MSKHTIFVCSSCAFSLQQKDYLGQRGGKHLSDRLKELRANWQYKDEFIIQEVSCLSACNRPCAVAFAAPNKTTLMFGDLPPITSPSSILRFAEQYFASNDGLIKRQDRPEVLQKGILARIPPLPPLKTPIAPNGSNC

Crispr_ID: NC_019780_34

• CRISPR_ID: NC_019780_34
• CRISPR_location: 2784183-2784266
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_34

Consensus_repeat	Method
CTACACCCAACCTACCTGTTACTT	CRISPRCasFinder

spacers of NC_019780_34

>34.1|2784207|36|NC_019780|CRISPRCasFinder
GGATGTCATATTAAAATTGGTGTTGGGTTTCGTAAA

CRISPR arrays and Neighbor proteins around NC_019780_34

CRISPR arrays

The CRISPR arrays of NC_019780_34

>merge|NC_019780|34|2784183-2784266|CRISPRCasFinder
CTACACCCAACCTACCTGTTACTTGGATGTCATATTAAAATTGGTGTTGGGTTTCGTAAACTCCACCCAACCTACCTGTTACTT

>NC_019780|34|34|2784183-2784266|CRISPRCasFinder
CTACACCCAACCTACCTGTTACTT	GGATGTCATATTAAAATTGGTGTTGGGTTTCGTAAA
CTCCACCCAACCTACCTGTTACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15	unknown	unknown	gnl|CDD|180170
NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4	unknown	unknown	gnl|CDD|235462
NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	unknown	unknown	gnl|CDD|181933
NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase	unknown	unknown	gnl|CDD|370536
NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein	unknown	unknown	gnl|CDD|367884
NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|237137
NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl|CDD|274139
NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_019780.1|WP_156800794.1|2779286_2779505_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230272.1|2774194_2774458_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl|CDD|376852
NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_019780.1|WP_015230273.1|2774542_2776966_-|sucrose-synthase	unknown	unknown	gnl|CDD|274149
NC_019780.1|WP_015230286.1|2793408_2793594_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein	unknown	unknown	gnl|CDD|371813
NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|237376
NC_019780.1|WP_015230271.1|2773717_2774059_+|XisI-protein	unknown	unknown	gnl|CDD|370165
NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl|CDD|234639
NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3	unknown	unknown	gnl|CDD|179105

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	7.8934e-91
NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15	gnl|CDD|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	3.73829e-50
NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein	gnl|CDD|367884	pfam04240, Caroten_synth, Carotenoid biosynthesis protein. The representative member of this family is CruF, a C50 carotenoid 2',3'-hydratase involved in the synthesis of the C50 carotenoid bacterioruberin in the halophilic archaeon Haloarcula japonica.	8.25028e-87
NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	gnl|CDD|181933	PRK09532, PRK09532, DNA polymerase III subunit alpha; Reviewed.	0
NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase	gnl|CDD|370536	pfam09506, Salt_tol_Pase, Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase). Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.	0
NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|237137	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ	gnl|CDD|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	4.34722e-31
NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.11695e-49
NC_019780.1|WP_015230272.1|2774194_2774458_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl|CDD|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	1.51156e-07
NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.39276e-92
NC_019780.1|WP_015230273.1|2774542_2776966_-|sucrose-synthase	gnl|CDD|274149	TIGR02470, Sucrose_synthase_1, sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.04495e-10
NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein	gnl|CDD|371813	pfam11947, DUF3464, Protein of unknown function (DUF3464). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.	6.57119e-68
NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|237376	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional.	0
NC_019780.1|WP_015230271.1|2773717_2774059_+|XisI-protein	gnl|CDD|370165	pfam08869, XisI, XisI protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	5.98014e-46
NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX	gnl|CDD|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	1.28421e-52
NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3	gnl|CDD|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0

Protein sequences

>NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M
MFEFQIPWLSTIIIFPLLAAAVIPFLPNENGKTLRWFTLSASLITFLLTVYAFVNNFNLNDSQFQLQENYPWLPQLGLNWSLAVDGLSMPLIVLSGLITTLAVVAAWNVTYKSRLFYALILVLYSAQVGVFAAQDLLLFFLMWELELVPVYLLISIWGGKNRSYAATKFILYTAAGSVFILVGALGLAFYGNEVSFDMMQLGMKNLPFAVEMFAYVGFLIAFGVKLPIFPLHTWLPDAHSEASAPVSMILAGVLLKMGGYGLIRMNVEILPNAHVYFAPVLAVLGVVNIVYGAFTAFSQTNLKRRLAYSSISHMGFVLLGIASYTELGLNGAVLQMVSHGLIAAALFFLSGATYERTHTLVMEKMGGMAQEMPKIFALFTTAAMASLALPGMSGFVSELTVFLGIATSDAYSDIFKTAMVFLAAVGLILTPIYLLSMLRQVFYGASNSELAIEKYLGDAKPREIFITACLLLPIIGIGLYPKLATRTYDVKTVEVALKAREAVTPVIAERGNTFQASLNPFYAPGFVAPSLPQSNSQAMLDQYSATR
>NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ
MKLALDQYAHLDSPLHHWNQQLKLIALGGLIFAFAFVQNLGLLPVMVLITVILYVLSHLPLSFLLSRLQYPGIFIAAVVLVLPLISGETVLWEWGPIALREEGLLAVMLIVTRFVCILTISLILFGTAPFLSSIKAMRSLGLPRVIVDMTLLSYRYLESFGDTLTTMQRAMRLRGFDSRQFSVRNTKRLASLMGSLLVRSYEQSQQVYHAMILRGYNYGLRQQKIGLGVALREATPAMVFWFWFTCTIALSLMIAEFLF
>NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein
MKQLTQFPRIKTSEESALAVHDLKFSYPQQPAVLDQISFQIEAGERVGLIGPNGAGKTTLFLSACGILKPTAGEMFIFGESVQAETFNPNVGLVFQNPDDQLFCPTVWDDVAFGPENLQLSPSEIKHRVEEALTITGTYPLAQRIPHQLSGGQKCMVAIATVLAMHPQLILYDEPSANLDLSARRRLIDFLEISEQTIIISSHDLELLLEVCDRVILLNQGQIIADGDPHRVMGNQSLMESHGLEKPHSLFHHPPDAHQE
>NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase
MKSVFSVNELFNRLDDPNLVVIDCRFQLADPSWGKKQYETRHIPGAFYLDLNQDLSSPVQKHGGRHPLPDSDSLGQKLAKMGINRGETQVIAYDDSRCAFAARLWWLLRYYGHDRVAVLDGGWNAWEKAGYPVSAQIPPSKTGHFSPQLRTDWVVDRTEVKARQQDPNTVIIDSRDPDRYRGEREPIDPVAGHIAGAINLPWKSVTDEQGNIYPPSQQQKRWLNSDLPLGETQEKIVYCGSGVTACVNLFSLHLASLPLGKLYAGSWSDWCSYS
>NC_019780.1|WP_156800794.1|2779286_2779505_+|hypothetical-protein
MLKKSIGWFSKARGKRQEARGRVLMIEQSMNLHFYLNLIASNPYLVKLSVSQQQALTKFPPFKGGLGGIDCN
>NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase
MSKFHPLLQENSPSLNHQKLADILTNYDNILIIQDLDGVCMELVKDPLNRTIEPKYVEATKAFSDQFYVLTNGEHIGKRGVNSIIDRAFGDADFVHKNSLYLPGLAAGGVQWQNRKGNVSHPGVTEKELAFLATVPQRIREQLEQFFKQFSDTRSSAEIESDIEASILDNMASPTANLNTIYDRLKTNPERYFQLQKTMAQLMETLLSEAHQQGLTDSFFVHYAPNLGRDKNGKEILRPVEKTDSGTTDFQFMIRGAIKEAGVLYLLNYYYYQRTGNYPLGKDFNVRDAPNNYSELLQLVKNNFDFNLMPILIGVGDTVNSSVTEINGKIEARRGGSDRAFLQLIQDIHPNNIVVYIDSSGGEVKNRKPVRIETTPNGEAKVTETPTDPRDINDPLTLNLIFPRGHSEYTAFFRDVATKKLNRN
>NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein
MIKLIIQIPCYNEEATLGATLADLPRELPGVDQIQWLIIDDGSRDRTVEVAEASGVDYIVRHPKNQGLAKAFMTGLRHSLAAGADIIVNTDADNQYCATDIPHLIEPILLQRAEIVVGARPINKIPHFSPIKKTLQRLGSYVVRLASNTNIPDAPSGFRAFSREAAFQINVFDNYTYTLETIIQAGQKGMAITSVPVGVNGDLRPSRLVKSTPTYILRSMTTILRIFMLYKPLRFFLILGSIPFSAGFLLGVRWLIFFFMGTDRTRVPSLILTAILILIGFQLWMFGLVADLMAANRRLMEDIQVNLRKENNAN
>NC_019780.1|WP_015230273.1|2774542_2776966_-|sucrose-synthase
MSELLQAVLESKEKTDLRDFIDLLRREGSHRYLLRNDILNAFSSFCQDQEKSLDYPKTSALGRLIYYTQELILEYESLYLIVRPEIAKQESYRICDDFSVESLTRQELLDVRDRYVNHYNPEEGDVFEIDFQPFYDYSPIIKDSKNIGRGVDFLNRYMSSKLFQDPNQWLTAVYNFLSLHSYNGITLLINGRIQNQQQLSAQVKLALTFVNDLPHNKPYEDFRFDLQNMGFEPGWGNTARRIKESLEILDELIDSPDNKGLEAFLSRIPMIFKIVLVSVHGWFGQEGVLGRPDTGGQVVYVLDQARSLEKQLEEDIELAGLTSLGVKPKVLILSRLIPNNDGTRCNERLEKVHGTENGWILRVPFRENNPNVTQDWISRFEIWPYLETYAIDAEREICAELEGKPNLIIGNYSDGNLVAFLLARRLNVTQFNVAHALEKSKYLFSNLYWQDLEENYHFSIQFTADLIAMNAAQCIISSTYQEIVGRPDSVGQYESYQNFTMPDLYHVVNGIELFSPKFNVVPPGVNENIYFPYKNTEDRIPNRIEQVEELLFYKEDESQVFGKLDDPSKRPLFSMARLDRIKNLTGLVECFGRSPQLQEHCNLILIAGKLHVSETTDSEEKDEIEKMYRLIEEYNLQGKIRWLGVRLPKSDSGEVYRVIADHHGIFVQPALFEAFGLTILEAMISGLPTFGTQFGGPLEIIQDQVNGFYINPTNLEETAQKILDFVQKCDRNPELWGEISEKAMQRVYTSYTWKIHTTKLLSLARIYGFWNFTSQENREDMLRYIESLFYLIYKPRSQALLEQHQGR
>NC_019780.1|WP_015230272.1|2774194_2774458_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MKSYTLTQTRNRHGEVFDRAKIEPVLVTKQERPSHVILSAEAYQKLIARLEELEDVSWGKAAQTAFNESSMVGTDQFTTALEKIANG
>NC_019780.1|WP_015230271.1|2773717_2774059_+|XisI-protein
MDQLNHYQTIIKKILTEYHKIFLQVSDPDVDEVLIFDDERCHYIWLNIGWKDGEKVNAMSVYVRLKNNKIYIEEDWTEEGIANELIREGIAKEEIVLAFYSPEHRKFTDCAIA
>NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N
MSSFVGLHIHSDYSLLDGASQLPPLIDRAVELGMDAIALTDHGVMYGAIELIKVCRSKNIKPIIGNEMYVINTDDLEKPGKYKKYHQVVLAKDTQGYKNLVKLTTISNLKGVHGKGIFARPCINKDYLEQYKEGLIVTSGCLGGELPQAILRGERKEARKVAKWYKKVFGDDYYLEIQDHGSQEDRIVNSEIVKISEELDIKIIATNDSHFISCNDVEAHDALICIQTNKLITEDKRLRYSGTEYLKSAEEMRQLFRDHLSDDIIESAIGNTVEVAKKIKSYNILGEPRLPDYPVPSGHTDDSYLEEITWKGLLERLDCRSRSEVEETYKTRLERELKIMQERGFSSYFLVVWDYIKYARDNNIPVGPGRGSAAGSLVAYALKITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDDVIDYVTHRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYSESDRLAKMIPVARGKPAELTKMISDETPEPEFKKLYDSDEKVQRWVDMAIRIEGTNKTYGVHAAGVVISKEPLDEIVPLQKNNDGAVITQYYMEDLEALGLLKMDFLGLKNLTTIKHTADLIEKNTGNRLNLDQLPIDEIRSREILAKGEIKNTKPDDVQKTYDLIEKGQLDGIFQLESSGMLKVVQDLKPSSIEDISSILALYRPGPLDAGLIPKFVDRKHGKEEITYEHPILEKILDETYAVMVYQEQIMKIAQDMAGYSLGQADLLRRAMGKKKVAEMQKHREMFIDGATKNGVKQQVAESLFEQMIKFAEYCLSYDTEVLTEEYGAIPIGKIVEERMNCHVYSVDENGFIYSQPIAQWHPRGEQEVVEYTLEDGKIIRATADHKMMTETGEMLPIEQIFQQQLDLKISNQ
>NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4
MTNVSVSRFRNFSIIAHIDHGKSTLADQLLRWTDTVKEREMKEQFLDNMDLERERGITIKLQAARMNYTAKDGETYVLNLIDTPGHVDFSYEVSRSLVACEGALLIVDASQGVEAQTLANIYLALEQNLEIIPVLNKIDLPSAEPERVLEEIEEAIGLDCSNAIMASAKMGKGIDEILEAIVRLIPPPAETTNEPLRALIFDSYYDPYRGVIVYFRVVDGTVKVGDKIRLMASKKEYEIDEIGILSPTKVPVEELHAGEVGYIAASIKAVEDARVGDTITLANKQAASPLPGYQEAKPMVFCGLFPTSTDDYADLRDALDKLKLNDSALSYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYDLDLVVTAPSVIYRVMLNDGEIIEIDNPSALPSPQEREAVEEPYIHLEMITPEEYVGALMELCQGRRGEFKDMKYFTPTRTTLVYELPLAEVVTDFFDQMKSRSRGYASMEYNFLGYRANELVKLDIMVNNESVDSLAMIVHRDKAYPVGKSLVEKLKELIPRQQFKIPVQAGIGSRIIASAHIPPLRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSIGTVDVPQEAFMAVLKLEQ
>NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3
MSTEQELKQAVESRRNFAIISHPDAGKTTLTEKLLLYGGAIHQAGAVKSKRAQRQATSDWMELEKQRGISITSTVLQFDYHNFQINLLDTPGHQDFSEDTYRTLAAADNAVMLIDAAKGLEPQTRKLFEVCRMRSLPIFTFANKMDRPSREPLELIDEIEQELGLQTYAVNWPIGLGDRFQGVYDRRTEQIHLFQRTAHGSTQAQSTVLSITDPKIEEVLDQELYFQLKDEIEIIEEVAPDFDLKRIHNGELSPMFFGSAMTNFGVQLFLDAFLEYAQPPEAHQSSLGEMNPTYPDFTGFVFKLQANMDPKHRDRVAFVRVCTGKFEKDMTVNHARSGKTVRLSRPQKLFAQDRDSIDNAYPGDVIGLNNPGMFAIGDTVYTGQKIVYEGIPSFSPELFAYLKNPNSSRFKQFHKGVTELREEGAIQIMYSKDESKRDPILAAVGQLQLEVVQYRMENEYNVETRLEMLPYKVARWVKGGWEALDEVGRLFNTAIVKDILDRPVLLFKNQWNLQQVEGDHPELQLSAIAPLERIS
>NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase
MIIVMKVGSPEAEISRLCEECTAKGLTPEKIVGKHKVVIGLVGDTASMDPLQLQEMSPWIEEVVRVEQPFKRASREFRHGEPSEVWVDTPNGAVAFGEHHPVVLVAGPCSVENEEMIVETAKAVKSSGAKFLRGGAYKPRTSPYSFQGHGESALELLAAAREASGLGIITEVMDTADVEKIAEVADVLQVGARNMQNFALLKKVGAQNKPVLLKRGMSATIEEWIMAAEYILAAGNPNVILCERGIRTFDRRYTRNTLDLSVIPVLRTLTHLPIMIDPSHGTGKSEYVPAMAMGAIATGTDSLMIEVHPNPAKAWSDGAQSLTPARFKELVQELGVIAKPLGRWESSPVAVA
>NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein
MASQPEEKRTNLPFEPTRKRKKKPKTEPVKTESKPQPPVQDQRKAQASLSAIPESVSQRMVRRMAFFSGIPTSLGILSFFAFYWIVTKELLELPPYTVVLVSMGLFGLGVLGLSYGLISASWDEERVGTRFGWEEFTVNIKRIFAAFRTAREERRQE
>NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15
MSLTQERKQEIINDYQVHETDTGSTEVQIAILTKRITRLTEHLKSNDKDHSSRRGLLKLIGHRRSLLSYLQKENQERYQELIKRLGIRG
>NC_019780.1|WP_015230286.1|2793408_2793594_-|hypothetical-protein
MSKIEKLEENVRNLSPEEFSQFREWFYELENERWDQEIEMDFEAGKFDRLIEKARQEFAPR
>NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX
MSGRISALGLDIGKKRIGVAGCDGTGLIATPLTTITRVGFTDDVAKLQQLIAEREVTILVIGLPYSLAGEWGKQAQRTEKYAERLASVLKLPIEYMDERLTSIEAETQLKTKRGFSPRRDKAQIDAHAAAIILQQWLDHKRLTSH
>NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase
MNLFLPEENNLTIRWLQDRDLDAIEALLKSSHELHHSGSVSAFSEDIANFRQWYNPLKLRSLFPNPAQHKFCIYVAEKEEQVVGAIKVSPTNSSRSTWQVEHILVDPSYPLAGKRIGSQLLRYCFETIWEARTWILEVNIHHKSILGLYRSNGFQPLAQSTYWLISPQQLQELAQHEPKLPNLLPVNNADAQLLYQLDTVSMPPLLRQVFDRHVTDFNRNFLEITIGRLQQWLGRKQTQEGYVFEPQRKAAIAHYQLNPNLGENQPRECKLTVHPAYTWLYRELVAKIARSLPKNTHLLLASADYQPEREEYLEEIGAERIEHTLLLSRSVWHKLREAPSSLERLQLSGVLQGLRPGGSPIPSRLPWLNSFAKETEENLEQEILRKEEEEAN
>NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein
MKLQQSGSGFSPATGLLIGHIGAMIFGIAGLVLVLPNGEFIASLPPIGQTAFSYSMAGGGVVYMLLGASAVAVYAYQNLGGKRWLTFMVPALSLSLASELLGTSTGFPFGEYRYLSGLGYKIADLVPFTIPLSWFYVGFCTYLIARVGLESRPLPTWVRSVGAIGVGSLLLTFWDFVLDPAMSQTDVPFWVWEQPGAFFGMPYQNFAGWFITGVIFMTTAHLFWGNQRLGLVRRDLTFAFVVYFSNILFGVVLSLAAGIWIPVVIGTIFAVIPCAVLYWITPTVTASPMVKTETEEKDAVSMAQLQSNRAQ

Crispr_ID: NC_019780_35

• CRISPR_ID: NC_019780_35
• CRISPR_location: 2790900-2791031
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_35

Consensus_repeat	Method
TTGGGTGAAACGAAGTGAAACCCAACATCATT	CRISPRCasFinder

spacers of NC_019780_35

>35.1|2790932|68|NC_019780|CRISPRCasFinder
CTCCCCGTAGGTTGGGTGAAACGAAGTGAAACCCAACATCATTATCCACATAATCACCTCCCCGTAGT

CRISPR arrays and Neighbor proteins around NC_019780_35

CRISPR arrays

The CRISPR arrays of NC_019780_35

>merge|NC_019780|35|2790900-2791031|CRISPRCasFinder
TTGGGTGAAACGAAGTGAAACCCAACACAAGCCTCCCCGTAGGTTGGGTGAAACGAAGTGAAACCCAACATCATTATCCACATAATCACCTCCCCGTAGTTTGGGTGAAACGAAGTGAAACCCAACATCATT

>NC_019780|35|35|2790900-2791031|CRISPRCasFinder
TTGGGTGAAACGAAGTGAAACCCAACACAAGC	CTCCCCGTAGGTTGGGTGAAACGAAGTGAAACCCAACATCATTATCCACATAATCACCTCCCCGTAGT
TTGGGTGAAACGAAGTGAAACCCAACATCATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase	unknown	unknown	gnl|CDD|225450
NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15	unknown	unknown	gnl|CDD|180170
NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3	unknown	unknown	gnl|CDD|179105
NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379228
NC_019780.1|WP_015230290.1|2796690_2797923_+|glycosyltransferase	unknown	unknown	gnl|CDD|213815
NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	unknown	unknown	gnl|CDD|181933
NC_019780.1|WP_015230291.1|2798341_2799190_-|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase	unknown	unknown	gnl|CDD|370536
NC_019780.1|WP_051017322.1|2797892_2798141_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|237137
NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4	unknown	unknown	gnl|CDD|235462
NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl|CDD|274139
NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NC_019780.1|WP_156800794.1|2779286_2779505_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192
NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein	unknown	unknown	gnl|CDD|367884
NC_019780.1|WP_015230286.1|2793408_2793594_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein	unknown	unknown	gnl|CDD|371813
NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|237376
NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl|CDD|234639

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase	gnl|CDD|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	7.8934e-91
NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15	gnl|CDD|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	3.73829e-50
NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3	gnl|CDD|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein	gnl|CDD|367884	pfam04240, Caroten_synth, Carotenoid biosynthesis protein. The representative member of this family is CruF, a C50 carotenoid 2',3'-hydratase involved in the synthesis of the C50 carotenoid bacterioruberin in the halophilic archaeon Haloarcula japonica.	8.25028e-87
NC_019780.1|WP_015230290.1|2796690_2797923_+|glycosyltransferase	gnl|CDD|213815	TIGR03469, HpnB, hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.	1.14291e-34
NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	gnl|CDD|181933	PRK09532, PRK09532, DNA polymerase III subunit alpha; Reviewed.	0
NC_019780.1|WP_015230291.1|2798341_2799190_-|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	4.28052e-72
NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase	gnl|CDD|370536	pfam09506, Salt_tol_Pase, Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase). Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.	0
NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|237137	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4	gnl|CDD|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ	gnl|CDD|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	4.34722e-31
NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	2.11695e-49
NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.39276e-92
NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase	gnl|CDD|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.04495e-10
NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein	gnl|CDD|371813	pfam11947, DUF3464, Protein of unknown function (DUF3464). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.	6.57119e-68
NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|237376	PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional.	0
NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX	gnl|CDD|234639	PRK00109, PRK00109, Holliday junction resolvase RuvX.	1.28421e-52

Protein sequences

>NC_019780.1|WP_015230282.1|2789267_2790875_+|peptide-chain-release-factor-3
MSTEQELKQAVESRRNFAIISHPDAGKTTLTEKLLLYGGAIHQAGAVKSKRAQRQATSDWMELEKQRGISITSTVLQFDYHNFQINLLDTPGHQDFSEDTYRTLAAADNAVMLIDAAKGLEPQTRKLFEVCRMRSLPIFTFANKMDRPSREPLELIDEIEQELGLQTYAVNWPIGLGDRFQGVYDRRTEQIHLFQRTAHGSTQAQSTVLSITDPKIEEVLDQELYFQLKDEIEIIEEVAPDFDLKRIHNGELSPMFFGSAMTNFGVQLFLDAFLEYAQPPEAHQSSLGEMNPTYPDFTGFVFKLQANMDPKHRDRVAFVRVCTGKFEKDMTVNHARSGKTVRLSRPQKLFAQDRDSIDNAYPGDVIGLNNPGMFAIGDTVYTGQKIVYEGIPSFSPELFAYLKNPNSSRFKQFHKGVTELREEGAIQIMYSKDESKRDPILAAVGQLQLEVVQYRMENEYNVETRLEMLPYKVARWVKGGWEALDEVGRLFNTAIVKDILDRPVLLFKNQWNLQQVEGDHPELQLSAIAPLERIS
>NC_019780.1|WP_015230281.1|2787302_2789111_+|elongation-factor-4
MTNVSVSRFRNFSIIAHIDHGKSTLADQLLRWTDTVKEREMKEQFLDNMDLERERGITIKLQAARMNYTAKDGETYVLNLIDTPGHVDFSYEVSRSLVACEGALLIVDASQGVEAQTLANIYLALEQNLEIIPVLNKIDLPSAEPERVLEEIEEAIGLDCSNAIMASAKMGKGIDEILEAIVRLIPPPAETTNEPLRALIFDSYYDPYRGVIVYFRVVDGTVKVGDKIRLMASKKEYEIDEIGILSPTKVPVEELHAGEVGYIAASIKAVEDARVGDTITLANKQAASPLPGYQEAKPMVFCGLFPTSTDDYADLRDALDKLKLNDSALSYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYDLDLVVTAPSVIYRVMLNDGEIIEIDNPSALPSPQEREAVEEPYIHLEMITPEEYVGALMELCQGRRGEFKDMKYFTPTRTTLVYELPLAEVVTDFFDQMKSRSRGYASMEYNFLGYRANELVKLDIMVNNESVDSLAMIVHRDKAYPVGKSLVEKLKELIPRQQFKIPVQAGIGSRIIASAHIPPLRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKSIGTVDVPQEAFMAVLKLEQ
>NC_019780.1|WP_015230280.1|2784271_2786902_+|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N
MSSFVGLHIHSDYSLLDGASQLPPLIDRAVELGMDAIALTDHGVMYGAIELIKVCRSKNIKPIIGNEMYVINTDDLEKPGKYKKYHQVVLAKDTQGYKNLVKLTTISNLKGVHGKGIFARPCINKDYLEQYKEGLIVTSGCLGGELPQAILRGERKEARKVAKWYKKVFGDDYYLEIQDHGSQEDRIVNSEIVKISEELDIKIIATNDSHFISCNDVEAHDALICIQTNKLITEDKRLRYSGTEYLKSAEEMRQLFRDHLSDDIIESAIGNTVEVAKKIKSYNILGEPRLPDYPVPSGHTDDSYLEEITWKGLLERLDCRSRSEVEETYKTRLERELKIMQERGFSSYFLVVWDYIKYARDNNIPVGPGRGSAAGSLVAYALKITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDDVIDYVTHRYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYSESDRLAKMIPVARGKPAELTKMISDETPEPEFKKLYDSDEKVQRWVDMAIRIEGTNKTYGVHAAGVVISKEPLDEIVPLQKNNDGAVITQYYMEDLEALGLLKMDFLGLKNLTTIKHTADLIEKNTGNRLNLDQLPIDEIRSREILAKGEIKNTKPDDVQKTYDLIEKGQLDGIFQLESSGMLKVVQDLKPSSIEDISSILALYRPGPLDAGLIPKFVDRKHGKEEITYEHPILEKILDETYAVMVYQEQIMKIAQDMAGYSLGQADLLRRAMGKKKVAEMQKHREMFIDGATKNGVKQQVAESLFEQMIKFAEYCLSYDTEVLTEEYGAIPIGKIVEERMNCHVYSVDENGFIYSQPIAQWHPRGEQEVVEYTLEDGKIIRATADHKMMTETGEMLPIEQIFQQQLDLKISNQ
>NC_019780.1|WP_015230279.1|2782368_2784012_+|NADH-quinone-oxidoreductase-subunit-M
MFEFQIPWLSTIIIFPLLAAAVIPFLPNENGKTLRWFTLSASLITFLLTVYAFVNNFNLNDSQFQLQENYPWLPQLGLNWSLAVDGLSMPLIVLSGLITTLAVVAAWNVTYKSRLFYALILVLYSAQVGVFAAQDLLLFFLMWELELVPVYLLISIWGGKNRSYAATKFILYTAAGSVFILVGALGLAFYGNEVSFDMMQLGMKNLPFAVEMFAYVGFLIAFGVKLPIFPLHTWLPDAHSEASAPVSMILAGVLLKMGGYGLIRMNVEILPNAHVYFAPVLAVLGVVNIVYGAFTAFSQTNLKRRLAYSSISHMGFVLLGIASYTELGLNGAVLQMVSHGLIAAALFFLSGATYERTHTLVMEKMGGMAQEMPKIFALFTTAAMASLALPGMSGFVSELTVFLGIATSDAYSDIFKTAMVFLAAVGLILTPIYLLSMLRQVFYGASNSELAIEKYLGDAKPREIFITACLLLPIIGIGLYPKLATRTYDVKTVEVALKAREAVTPVIAERGNTFQASLNPFYAPGFVAPSLPQSNSQAMLDQYSATR
>NC_019780.1|WP_015230278.1|2781419_2782199_-|cobalt-ECF-transporter-T-component-CbiQ
MKLALDQYAHLDSPLHHWNQQLKLIALGGLIFAFAFVQNLGLLPVMVLITVILYVLSHLPLSFLLSRLQYPGIFIAAVVLVLPLISGETVLWEWGPIALREEGLLAVMLIVTRFVCILTISLILFGTAPFLSSIKAMRSLGLPRVIVDMTLLSYRYLESFGDTLTTMQRAMRLRGFDSRQFSVRNTKRLASLMGSLLVRSYEQSQQVYHAMILRGYNYGLRQQKIGLGVALREATPAMVFWFWFTCTIALSLMIAEFLF
>NC_019780.1|WP_015230277.1|2780621_2781404_-|ABC-transporter-ATP-binding-protein
MKQLTQFPRIKTSEESALAVHDLKFSYPQQPAVLDQISFQIEAGERVGLIGPNGAGKTTLFLSACGILKPTAGEMFIFGESVQAETFNPNVGLVFQNPDDQLFCPTVWDDVAFGPENLQLSPSEIKHRVEEALTITGTYPLAQRIPHQLSGGQKCMVAIATVLAMHPQLILYDEPSANLDLSARRRLIDFLEISEQTIIISSHDLELLLEVCDRVILLNQGQIIADGDPHRVMGNQSLMESHGLEKPHSLFHHPPDAHQE
>NC_019780.1|WP_015230276.1|2779806_2780631_+|sulfurtransferase
MKSVFSVNELFNRLDDPNLVVIDCRFQLADPSWGKKQYETRHIPGAFYLDLNQDLSSPVQKHGGRHPLPDSDSLGQKLAKMGINRGETQVIAYDDSRCAFAARLWWLLRYYGHDRVAVLDGGWNAWEKAGYPVSAQIPPSKTGHFSPQLRTDWVVDRTEVKARQQDPNTVIIDSRDPDRYRGEREPIDPVAGHIAGAINLPWKSVTDEQGNIYPPSQQQKRWLNSDLPLGETQEKIVYCGSGVTACVNLFSLHLASLPLGKLYAGSWSDWCSYS
>NC_019780.1|WP_156800794.1|2779286_2779505_+|hypothetical-protein
MLKKSIGWFSKARGKRQEARGRVLMIEQSMNLHFYLNLIASNPYLVKLSVSQQQALTKFPPFKGGLGGIDCN
>NC_019780.1|WP_015230275.1|2778008_2779283_+|glucosylglycerol-3-phosphatase
MSKFHPLLQENSPSLNHQKLADILTNYDNILIIQDLDGVCMELVKDPLNRTIEPKYVEATKAFSDQFYVLTNGEHIGKRGVNSIIDRAFGDADFVHKNSLYLPGLAAGGVQWQNRKGNVSHPGVTEKELAFLATVPQRIREQLEQFFKQFSDTRSSAEIESDIEASILDNMASPTANLNTIYDRLKTNPERYFQLQKTMAQLMETLLSEAHQQGLTDSFFVHYAPNLGRDKNGKEILRPVEKTDSGTTDFQFMIRGAIKEAGVLYLLNYYYYQRTGNYPLGKDFNVRDAPNNYSELLQLVKNNFDFNLMPILIGVGDTVNSSVTEINGKIEARRGGSDRAFLQLIQDIHPNNIVVYIDSSGGEVKNRKPVRIETTPNGEAKVTETPTDPRDINDPLTLNLIFPRGHSEYTAFFRDVATKKLNRN
>NC_019780.1|WP_015230274.1|2777051_2777996_+|glycosyltransferase-family-2-protein
MIKLIIQIPCYNEEATLGATLADLPRELPGVDQIQWLIIDDGSRDRTVEVAEASGVDYIVRHPKNQGLAKAFMTGLRHSLAAGADIIVNTDADNQYCATDIPHLIEPILLQRAEIVVGARPINKIPHFSPIKKTLQRLGSYVVRLASNTNIPDAPSGFRAFSREAAFQINVFDNYTYTLETIIQAGQKGMAITSVPVGVNGDLRPSRLVKSTPTYILRSMTTILRIFMLYKPLRFFLILGSIPFSAGFLLGVRWLIFFFMGTDRTRVPSLILTAILILIGFQLWMFGLVADLMAANRRLMEDIQVNLRKENNAN
>NC_019780.1|WP_015230283.1|2791407_2792466_-|3-deoxy-7-phosphoheptulonate-synthase
MIIVMKVGSPEAEISRLCEECTAKGLTPEKIVGKHKVVIGLVGDTASMDPLQLQEMSPWIEEVVRVEQPFKRASREFRHGEPSEVWVDTPNGAVAFGEHHPVVLVAGPCSVENEEMIVETAKAVKSSGAKFLRGGAYKPRTSPYSFQGHGESALELLAAAREASGLGIITEVMDTADVEKIAEVADVLQVGARNMQNFALLKKVGAQNKPVLLKRGMSATIEEWIMAAEYILAAGNPNVILCERGIRTFDRRYTRNTLDLSVIPVLRTLTHLPIMIDPSHGTGKSEYVPAMAMGAIATGTDSLMIEVHPNPAKAWSDGAQSLTPARFKELVQELGVIAKPLGRWESSPVAVA
>NC_019780.1|WP_015230284.1|2792584_2793058_-|PAM68-family-protein
MASQPEEKRTNLPFEPTRKRKKKPKTEPVKTESKPQPPVQDQRKAQASLSAIPESVSQRMVRRMAFFSGIPTSLGILSFFAFYWIVTKELLELPPYTVVLVSMGLFGLGVLGLSYGLISASWDEERVGTRFGWEEFTVNIKRIFAAFRTAREERRQE
>NC_019780.1|WP_015230285.1|2793075_2793345_-|30S-ribosomal-protein-S15
MSLTQERKQEIINDYQVHETDTGSTEVQIAILTKRITRLTEHLKSNDKDHSSRRGLLKLIGHRRSLLSYLQKENQERYQELIKRLGIRG
>NC_019780.1|WP_015230286.1|2793408_2793594_-|hypothetical-protein
MSKIEKLEENVRNLSPEEFSQFREWFYELENERWDQEIEMDFEAGKFDRLIEKARQEFAPR
>NC_019780.1|WP_015230287.1|2793631_2794069_-|Holliday-junction-resolvase-RuvX
MSGRISALGLDIGKKRIGVAGCDGTGLIATPLTTITRVGFTDDVAKLQQLIAEREVTILVIGLPYSLAGEWGKQAQRTEKYAERLASVLKLPIEYMDERLTSIEAETQLKTKRGFSPRRDKAQIDAHAAAIILQQWLDHKRLTSH
>NC_019780.1|WP_015230288.1|2794065_2795244_-|GNAT-family-N-acetyltransferase
MNLFLPEENNLTIRWLQDRDLDAIEALLKSSHELHHSGSVSAFSEDIANFRQWYNPLKLRSLFPNPAQHKFCIYVAEKEEQVVGAIKVSPTNSSRSTWQVEHILVDPSYPLAGKRIGSQLLRYCFETIWEARTWILEVNIHHKSILGLYRSNGFQPLAQSTYWLISPQQLQELAQHEPKLPNLLPVNNADAQLLYQLDTVSMPPLLRQVFDRHVTDFNRNFLEITIGRLQQWLGRKQTQEGYVFEPQRKAAIAHYQLNPNLGENQPRECKLTVHPAYTWLYRELVAKIARSLPKNTHLLLASADYQPEREEYLEEIGAERIEHTLLLSRSVWHKLREAPSSLERLQLSGVLQGLRPGGSPIPSRLPWLNSFAKETEENLEQEILRKEEEEAN
>NC_019780.1|WP_041235889.1|2795617_2796553_+|carotenoid-biosynthesis-protein
MKLQQSGSGFSPATGLLIGHIGAMIFGIAGLVLVLPNGEFIASLPPIGQTAFSYSMAGGGVVYMLLGASAVAVYAYQNLGGKRWLTFMVPALSLSLASELLGTSTGFPFGEYRYLSGLGYKIADLVPFTIPLSWFYVGFCTYLIARVGLESRPLPTWVRSVGAIGVGSLLLTFWDFVLDPAMSQTDVPFWVWEQPGAFFGMPYQNFAGWFITGVIFMTTAHLFWGNQRLGLVRRDLTFAFVVYFSNILFGVVLSLAAGIWIPVVIGTIFAVIPCAVLYWITPTVTASPMVKTETEEKDAVSMAQLQSNRAQ
>NC_019780.1|WP_015230290.1|2796690_2797923_+|glycosyltransferase
MSFFVVINLVITDPSTSNGLLATGCCLLLLLQLPATFILLSRLLKGAKRVPPLLPRMTTPEQFGTVSIIVPTLNEADRISPCLRGLTQQGYEVREILVVDSDSTDGTPDLVKAAQKHDPRFRLLSDAPLPSGWVGRPWALHTGLMASSENSEWVLGIDADTQPRSGLVSALIASAESEGYDLLSLSPQFQLKSSGEWWLQPALLMTLLYRFDVAGVKPNPPERVMANGQCFLARREVLTALGGYEAAKGSFCDDVTLARYAASMGAQVGFFDGAKVIKVRMYEGMKETWQEWGRSLDLKDASTPSLLLLELWLLLVLQGLPLPVFVGSIAAFLQGETSLMFLLAFGLNGGLLIIRFALLFAVAPSYDRAASPQSWFFWLSPFADLPAVARIFLSASKRPTQWRGRLYHNN
>NC_019780.1|WP_051017322.1|2797892_2798141_+|hypothetical-protein
MARTTVSQQLVTIALRARQEARGKRQEARGKRQEARGKRQEARGKRQEARGKRQEARGKRQEARGKRQKAKGKRQKARGKLP
>NC_019780.1|WP_015230291.1|2798341_2799190_-|ribonuclease-HI
MKPVIDCIYTDGACLGNPGPGGWGAVLYFQDGSVYEIGGAERETTNNRMELQAAIASLQLFRDSGQTKPIQLYSDSQYLIKGLTQWLKGWKKKGWKTSTGKAVLNQDLWQLLDQLNNSLVTWKHVPAHQGIAGNERCDAIARHFAQGQQPNLKKTLEFPLTANSDTVAEVKQTIQSETPEPIASKTLANPMEELEERSLEDSRLIQGDRMTGLNHLIESLRIADEIAQKGYLISSSELAELMNVNASAVTSRGSHWSWRNWVVSRVRREGNQILWQLERAEG

Crispr_ID: NC_019780_36

• CRISPR_ID: NC_019780_36
• CRISPR_location: 2831924-2832050
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_36

Consensus_repeat	Method
GCAAACCCTACTACACCTCAAATTTTGTATTAATAATGAGT	CRISPRCasFinder

spacers of NC_019780_36

>36.1|2831965|45|NC_019780|CRISPRCasFinder
AATACCAATTTAGAAAGTAGATGTTACATCTTGTAGGGTGGGCAA

CRISPR arrays and Neighbor proteins around NC_019780_36

CRISPR arrays

The CRISPR arrays of NC_019780_36

>merge|NC_019780|36|2831924-2832050|CRISPRCasFinder
GCAAACCCTACTACACCTCAAATTTTGTATTAATAATGAGTAATACCAATTTAGAAAGTAGATGTTACATCTTGTAGGGTGGGCAAGGCAAACCCTACTACACTCAAATTTTGTATTAATAATGAGT

>NC_019780|36|36|2831924-2832050|CRISPRCasFinder
GCAAACCCTACTACACCTCAAATTTTGTATTAATAATGAGT	AATACCAATTTAGAAAGTAGATGTTACATCTTGTAGGGTGGGCAA
GGCAAACCCTACTACACTCAAATTTTGTATTAATAATGAGT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230331.1|2839063_2841085_+|Rne/Rng-family-ribonuclease	unknown	unknown	gnl|CDD|273254
NC_019780.1|WP_015230318.1|2828927_2829572_+|phosphoribosyltransferase	unknown	unknown	gnl|CDD|224837
NC_019780.1|WP_015230326.1|2834435_2834669_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230329.1|2837308_2837527_-|TIGR03643-family-protein	unknown	unknown	gnl|CDD|378528
NC_019780.1|WP_156800796.1|2832076_2832229_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230327.1|2834773_2836462_-|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213023
NC_019780.1|WP_015230320.1|2830490_2830913_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230330.1|2837625_2838264_+|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NC_019780.1|WP_015230328.1|2836653_2837151_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235494.1|2832899_2833139_+|hypothetical-protein	unknown	unknown	gnl|CDD|225387
NC_019780.1|WP_015230321.1|2830927_2831785_-|SPOR-domain-containing-protein	unknown	unknown	gnl|CDD|335993
NC_019780.1|WP_156800795.1|2826316_2826682_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230315.1|2824573_2825464_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_019780.1|WP_015230314.1|2822104_2822341_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230313.1|2820449_2821922_-|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl|CDD|223363
NC_019780.1|WP_156800797.1|2833684_2833858_-|TonB-family-protein	unknown	unknown	gnl|CDD|273570
NC_019780.1|WP_015230319.1|2829649_2830240_-|PEP-CTERM-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275017
NC_019780.1|WP_015230317.1|2827288_2828950_+|citramalate-synthase	unknown	unknown	gnl|CDD|237068
NC_019780.1|WP_015230323.1|2832385_2832688_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230316.1|2825547_2826240_+|glutathione-S-transferase-family-protein	unknown	unknown	gnl|CDD|223698

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230331.1|2839063_2841085_+|Rne/Rng-family-ribonuclease	gnl|CDD|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	9.04573e-165
NC_019780.1|WP_015230318.1|2828927_2829572_+|phosphoribosyltransferase	gnl|CDD|224837	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only].	1.86823e-50
NC_019780.1|WP_015230330.1|2837625_2838264_+|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	6.94819e-66
NC_019780.1|WP_015230329.1|2837308_2837527_-|TIGR03643-family-protein	gnl|CDD|378528	pfam10985, DUF2805, Protein of unknown function (DUF2805). This is a bacterial family of proteins with unknown function.	6.07516e-34
NC_019780.1|WP_041235494.1|2832899_2833139_+|hypothetical-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	2.87135e-06
NC_019780.1|WP_015230321.1|2830927_2831785_-|SPOR-domain-containing-protein	gnl|CDD|335993	pfam05036, SPOR, Sporulation related domain. This 70 residue domain is composed of two 35 residue repeats found in proteins involved in sporulation and cell division such as FtsN, DedD, and CwlM. This domain is involved in binding peptidoglycan. Two tandem repeats fold into a pseudo-2-fold symmetric single-domain structure containing numerous contacts between the repeats. FtsN is an essential cell division protein with a simple bitopic topology, a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. These repeats lay at the periplasmic C-terminus. FtsN localizes to the septum ring complex.	0.0012967
NC_019780.1|WP_015230315.1|2824573_2825464_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.4821e-46
NC_019780.1|WP_015230316.1|2825547_2826240_+|glutathione-S-transferase-family-protein	gnl|CDD|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	1.77301e-35
NC_019780.1|WP_015230313.1|2820449_2821922_-|SAM-dependent-DNA-methyltransferase	gnl|CDD|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.5037e-84
NC_019780.1|WP_015230319.1|2829649_2830240_-|PEP-CTERM-sorting-domain-containing-protein	gnl|CDD|275017	TIGR04155, hypothetical_protein, PEP-CTERM protein sorting domain, cyanobacterial subclass. This domain model describes a subclass with family TIGR02595 of PEP-CTERM protein sorting signals associated with bacterial exosortases. This subclass is restricted to Cyanobacteria, including the genera Cyanothece, Nostoc, Trichodesmium, Lyngbya, Arthospira, etc. This PEP-CTERM subclass features strongly conserved residues within the transmembrane region, including a Gx4GxG motif. Model TIGR03763 describes a corresponding cyanobacterial form of exosortase found in most species with this domain.	4.75871e-05
NC_019780.1|WP_156800797.1|2833684_2833858_-|TonB-family-protein	gnl|CDD|273570	TIGR01352, Protein_TonB, TonB family C-terminal domain. This model represents the C-terminal of TonB and is homologs. TonB is an energy-transducer for TonB-dependent receptors of Gram-negative bacteria. Most members are designated as TonB or TonB-related proteins, but a few represent the paralogous TolA protein. Several bacteria have up to four TonB paralogs. In nearly every case, a proline-rich repetive region is found N-terminal to this domain; these low-complexity regions are highly divergent and cannot readily be aligned. The region is suggested to help span the periplasm. [Transport and binding proteins, Cations and iron carrying compounds].	8.88821e-05
NC_019780.1|WP_015230317.1|2827288_2828950_+|citramalate-synthase	gnl|CDD|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
NC_019780.1|WP_015230327.1|2834773_2836462_-|polysaccharide-deacetylase-family-protein	gnl|CDD|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	2.13651e-45

Protein sequences

>NC_019780.1|WP_015230321.1|2830927_2831785_-|SPOR-domain-containing-protein
MDSHTQINPKQEKATLHPKLQIALSSFNVNLEEELDRFQSSQKQRKGIVVSQEQSDSPSLTSSPSESSFLTEIEPETKFDEPDSYLASSEELLRTLSQQEENTTPPSRKSTPTKQTSVWSYLFTPLGIAGMLIFILAGTLVSLTLINLGENRLSASSGEVETLPPEPKLESPESSSEETIPNRPNLAADEFVELDQDNLVEAEPATELPPSEKPSCGGNFYCVVVENPNQTEYKKTRQLVADAYLREFPQVGQVLQVGAFDTESRAKTLLQRLEEQGITATIYSP
>NC_019780.1|WP_015230320.1|2830490_2830913_+|hypothetical-protein
MNQTEKLIWTAENELTEYSTEARKIEKLRRQFSFVVPYPQQKAIRDQIEAEMPKNPIAKVVEDNRQTVALPFWGIGGLGLLFGISSQQPLDFIATAIGFYAAYQIQKWGWNLEARRLVIKTFDAIEASVQAERSKTATDQ
>NC_019780.1|WP_015230319.1|2829649_2830240_-|PEP-CTERM-sorting-domain-containing-protein
MNQQSRTVFKSGALLVSAIALTSLISSPARAKGGPPSFDDPVACSTNNLSGASNCLGSFSGNDANSNLSGSFGINDWQQFSKIDSNSGSNSNLSVGGGNTSGTWSLNGLNSNSDYMVALKGGPSYSLYYLGRGETTAGGSWNTEGLAKGNGKPSPGLSHFTVYQGNSQAVPEPTTILGVMMAGGIGAWCKNKFNRS
>NC_019780.1|WP_015230318.1|2828927_2829572_+|phosphoribosyltransferase
MSETTLYENRWRAGESLATEIVTALEGVTLSVRVCALPRGGIPVAAPIAQRLNCPLDVLAAKKISLPSNPELALGAVTPDGTTVWAQSPYLKRKNQQELDKARENALQGAIELQEQFNPYCASMEHLENTIIIVVDDGIATGMTMITAVTSLREKQPTEIWVAAPVAPPETKVEFLERCDRVLILQTPDPFMNVGRFYKHFPQVSTVEAISYLN
>NC_019780.1|WP_015230317.1|2827288_2828950_+|citramalate-synthase
MTLNQTKNGVWIYDTTLRDGSQQEGISLSVEDKLKIAHKLDELGIPFIEGGWPGANPKDVQFFWQLKEEPLSQAEVVAFCSTRRPHKSAENDPMLQTILAAGTRWVTIFGKSWDLHVTEGLKTTLDENCAMIRDTIALLRSNGRKVIYDAEHWFDGYQSNPEYALKTLTTAVEAGAEWLVLCDTNGGTLPQTVSSVVQTVVKHLGINPNDEQSPKLGIHTHNDSETAVASSLVAVENGARMVQGTINGYGERCGNANLCSVIPNLQLKLNYSCLESEQLTKLTPTSRIIDEIVNFAPDPHAPYVGRSAFAHKGGIHVSAVERNPLTYEHINPNVIGNERRIVISDQAGISNIVAKARAFGINLDRKDPACADILQRTKELENQGYQFEVAEASFELLVYELLQQRLEMFQLKGFQVNCDMLRGEEALLSDAVATIKVSVNGEDILEAAEGNGPVSALDAALRKALVKFYPQIADFHLTDYKVRILDSTAGTDAVTRVLVESSDGKRRWTTIGVSSNILDASYQAVVAGIEYGLLQRKGETVVESDYRVGNNVV
>NC_019780.1|WP_156800795.1|2826316_2826682_+|hypothetical-protein
MHITVPPFQRGVRGDSSIELRKRLLSQRGVRGDSSIELRKRLLSQRGVRGDSSIELRKRLLSQRGVRGDSSIELRKRLLSQRGVRGDSSIELRKKLLSPFPLSKAVEGINLQIIWDSYITR
>NC_019780.1|WP_015230316.1|2825547_2826240_+|glutathione-S-transferase-family-protein
MTIKLYSASVCPFAHRTRLTLLEKGLDFQLIEIDLNNKPDWFSEISPYGKVPVIKHDNNCIWESAIINEYIDEAFPDISLMPKTASDRAFARIWIDFANTKLVPVFYKMLLEQDPEKQTKWKNQFREHLNFMETEGMRKLSENGDYWLGDRLSLVDLTFYPWFERFCILEHYRSVFLPKTCSFLQHWWRTMSERDSVQNIKNASEFYIAQYQKYANNTVNSVTAQEMRDN
>NC_019780.1|WP_015230315.1|2824573_2825464_-|ParA-family-protein
MGIVISTVNMKGGVGKTTLTVNLATCLAKNHQKRVLVVDLDSQISATLSLMPPQEFSKVRRRRRTLSYLIDKIVRPNIRRKYDTPDLIYSQICGISGLELLAGDIELYDEYLVSKKLHEEAISNSGQDFNQAWDNFESTLVQKIIQPVINDYDFIIMDCAPGYNLLTRSGIAASDFYLLPARPEPLSLVGVQLLEKRITRLKANDKSESEQLQKLRLLGIVFILSSGGLFGRYYKQVIQRIQQDFTPDQIFQQQIPMDVNVAKAVDTFTPAVLAMPNSSGSKAFSQLTEELLKKIN
>NC_019780.1|WP_015230314.1|2822104_2822341_-|hypothetical-protein
MNNTHHPEDELLPEYDFDYDQAHPNRFAKEHQKLLQRNHQPFDPPAEEYVHITREERNAQQDELMKELLGESDDNSLI
>NC_019780.1|WP_015230313.1|2820449_2821922_-|SAM-dependent-DNA-methyltransferase
MSLNATIKSIQDIMRKDVGVDGDAQRIGQLGWMLFYKKFSDQDQELELSDDEYESPIPMGLRWEEWADSETLGKKAPTGDALLAFVDNQLFPQLKELDFTNLTGLSRQRAELLRSVFEDAYNYMKSGTLLRQVIDKINDSIDFNESKTRHLFGDIYEKILKDLQSAGNYGEFYTPRAVTQFAVDMVNPQLGETVLDPACGTGGFLTAAYEHLRKQAQTPEQLEAIKQNIWGIEKKALPHLLCVTNLMVHEVEVPTTVRHANALAKPLRDYSPKDQVDVVVINPPFGGMEEDGIESNFPTEFRTRETADLFLLLVMELLKPQGRAAIVLPDGTLFGEGIKTRLKEKLLRDCNLHTIVRLPNGVFNPYTSIRTNVLFFTKGEPTETVWYYEHPYPSGYKSYSKTKPMRIEEFAAEKQWWNNREETELAWQVSVEDIKANGFNLDIKNPNVAAEDYKDPETLLKKYREAEAEVEEARNALKSSLMASLQREEM
>NC_019780.1|WP_156800796.1|2832076_2832229_+|hypothetical-protein
MFLSKAKIISLGFNLLELALFLDFTEKAVILLIFSSISLSIPIWSNYLYL
>NC_019780.1|WP_015230323.1|2832385_2832688_+|hypothetical-protein
MRTPNNLPSVCRHCRHYSPQGRRGGMCQKLSAPVRGDWQACSLADSPFLPTWETWEAITLWETPNFQAVKVTQKTNSPSEAVEVSFDLEEKSESKAVVNA
>NC_019780.1|WP_041235494.1|2832899_2833139_+|hypothetical-protein
MRYLWRVSQFCGVIGSSIARYRLLENLTAELAAGSQVGESMLNLKVQSANPIDVGLAVNNYQSRTIGVWQQKLQLQHHK
>NC_019780.1|WP_156800797.1|2833684_2833858_-|TonB-family-protein
MLLGCGSKPEINFEVEVRPIVSIQVNPGGSVTSATIARSSGKSRLDTGTSASTRTTG
>NC_019780.1|WP_015230326.1|2834435_2834669_-|hypothetical-protein
MVSFQYFVQFLCSIEACQYGEGGYEERVSLLSETFSKIGNTSHYLEILYQETRSSATLEKKFLLLMTSLGVAVGDDV
>NC_019780.1|WP_015230327.1|2834773_2836462_-|polysaccharide-deacetylase-family-protein
MLRKSRTKVGRVTRPQPMLNLSLFLLGVSFFGTVSYIIIKNNTSQESLSIPARSGLNAISERTNVISESLPPEIPKSPWPEINEHARQAKVPIVMYHDILPEKEVFFDVTPEELNHHFRKIALAGATPISFDRLLNHLQTGTPLPEKPILLTFDDGYGGHYKYVYPLLKKYNYPATFSIYTNKMEITTGRTSVTWEQLQEMANDPLVTIASHSISHPNDLRELSDQDLKKEIFDSKAILEKRLGIAIKYFTYPVGKHDQRVREQVKKAGYKAALEMKNNNTDFAGESENLLSIARFGQSRLETVLLQAWGGHPLPRQDGSYNFNTPIRKSTHEVGRHEVTIITGGRPKTIHADSRYQVEEIIEGTQAQAAVDGAFFSLKYLDSNVLIGPSLSHHNSEFSAGNKGENKSLVDRPLVLIAYDQVKFVPFNPEKHDTLTELREILSGVSDAFVAAAWLVKDNQPQPYRTFTDLYGFDAMRFRAFWGINQAGQPVIGVSQTRLDAVTLGEVLQEVGLREAVMLDSGASTALVYQGESLMRFVPRPVPHVVALYPPQAFRIQAHDRN
>NC_019780.1|WP_015230328.1|2836653_2837151_+|hypothetical-protein
MNQQATVDTFTENLNLSRAKVEELLQLSAIELPKKEEFQNELSTLDLSLLRETLPTAKSVLENQLPAFYTWLKQELKIKRVPDSPNHTTTWVANFLNNQESIEHLVALHRPVPPVALEQAIPRLVSLFEKVEDSHIRQQWQSAVALLCLVLAADARQQLQQEVSQ
>NC_019780.1|WP_015230329.1|2837308_2837527_-|TIGR03643-family-protein
MKSNQLNFEDIERIIEMAWEDDIPFDAIEAQYGLKEQQVIELMRSRLKPSSFKMWRKRVSGRKTKHEKKNQT
>NC_019780.1|WP_015230330.1|2837625_2838264_+|histidine-phosphatase-family-protein
MSLRLYLLRHGETTYSQTGNYCGETDPDLTTEGYQMAEAFAKAYSSLQWDAIYCSPMKRTVATAKPLCDAVGLEMQQRDGLKEIRYGAWEAKSSDWVKEHYNEDYINWLREPAWNPPTDGETAVEIATRASAVISEIRSKYAHGNILIVSHKATLRIIVCSLLGIDLGRYRDRIGFLAASLCLIKLDRHGPLIESLGDRSFMDQALRDRAGS
>NC_019780.1|WP_015230331.1|2839063_2841085_+|Rne/Rng-family-ribonuclease
MSKQIIIAEQHHTAAIFSENLIEEIVVATGNQQVGDIFLGVVENVIPGIDAAFVNIGDAERNGFIHVTDLGPLRLKRSAGAITELVAPQQKALVQVMKEPTGNKGPRLTGNISLPGRYLVLMPYGRGVNLSRRISKEGDRSRLRALGILIKPAGMGLLIRTEAEGQPEEAIIEDLELLKQQWESIQQGANTTRPPALLNRDDDFIQRVLRDIYTSDVNRIVVDSNIGVKRVKQQLASWNGGRSPNGVLVDHHRERQSILEYFRVNAAIREALKPRVDLPSGGYIIIEPTEALTVIDVNSGSFTRSATSRETVLWTNCEAAVEIARQLLLRKIGGVIIVDFIDMDSRQDQMKVLENFEQALKKDKARPQISQLSELGLIELTRKRQGQSLYEIFGQTCPTCAGLGHLAHLPGEHDPVPAVSATTIPSPSRVNVEETEEDSEFISPPADNSDLELMNHPSYQESSGDNVNRRRRRRTIDPPAKTESTPKPKLNNGAKGSNGDSESSQKNGKESKEIKTKTGGRPAQREEPKKKVAVEMTPLEQEMYALMGLSPLVRLDEEVDRRKTLVYAVSPGENGTTEQDSGTEIETKTPVESHPVESGEDEEQQEEVSTETEETETTPDSVPTPSETTASSVEETKTETSVASNTETEKEKETPSEPKVIRRRRRRSSAREN

Crispr_ID: NC_019780_37

• CRISPR_ID: NC_019780_37
• CRISPR_location: 2871892-2872115
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 5 spacers

Consensus repeat of NC_019780_37

Consensus_repeat	Method
GGGTGGAGGTNACGAAACC	CRT

spacers of NC_019780_37

>37.1|2871911|28|NC_019780|CRT
CAACAACAACCCAGTCAAAGCGTAGATT
>37.2|2871958|18|NC_019780|CRT
CAAGTCAAAGCGTAGGTT
>37.3|2871995|28|NC_019780|CRT
CAACAACAACCCAGTCAAAGCGTAGATT
>37.4|2872042|18|NC_019780|CRT
CAAGTCAAAGCGTAGGTT
>37.5|2872079|18|NC_019780|CRT
CAAGTCAAAGCGTAGGTT

CRISPR arrays and Neighbor proteins around NC_019780_37

CRISPR arrays

The CRISPR arrays of NC_019780_37

>merge|NC_019780|37|2871892-2872115|CRT
GGGTGGAGGTGACGAAACCCAACAACAACCCAGTCAAAGCGTAGATTGGGTGGAGGTAACGAAACCCAAGTCAAAGCGTAGGTTGGGTGGAGGTAACGAAACCCAACAACAACCCAGTCAAAGCGTAGATTGGGTGGAGGTAACGAAACCCAAGTCAAAGCGTAGGTTGGGTGAAGGTGACGAAACCCAAGTCAAAGCGTAGGTTGGGTGGAGGTAACGAAACC

>NC_019780|37|1|2871892-2872115|CRT
GGGTGGAGGTGACGAAACC	CAACAACAACCCAGTCAAAGCGTAGATT
GGGTGGAGGTAACGAAACC	CAAGTCAAAGCGTAGGTT
GGGTGGAGGTAACGAAACC	CAACAACAACCCAGTCAAAGCGTAGATT
GGGTGGAGGTAACGAAACC	CAAGTCAAAGCGTAGGTT
GGGTGAAGGTGACGAAACC	CAAGTCAAAGCGTAGGTT
GGGTGGAGGTAACGAAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800803.1|2865820_2866741_+|methylenetetrahydrofolate-reductase	unknown	unknown	gnl|CDD|236321
NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl|CDD|223461
NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein	unknown	unknown	gnl|CDD|236936
NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase	unknown	unknown	gnl|CDD|380078
NC_019780.1|WP_015230375.1|2888917_2889100_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein	unknown	unknown	gnl|CDD|197270
NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein	unknown	unknown	gnl|CDD|376890
NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|184450
NC_019780.1|WP_041235898.1|2864137_2865178_-|rod-shape-determining-protein	unknown	unknown	gnl|CDD|237562
NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_019780.1|WP_156800806.1|2878313_2880329_+|hypothetical-protein	unknown	unknown	gnl|CDD|380078
NC_019780.1|WP_156800807.1|2889111_2889249_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein	unknown	unknown	gnl|CDD|238920
NC_019780.1|WP_015230361.1|2863700_2864057_-|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl|CDD|272875
NC_019780.1|WP_156800804.1|2876578_2876776_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein	unknown	unknown	gnl|CDD|371670
NC_019780.1|WP_041235496.1|2865373_2865733_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|180986

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_156800803.1|2865820_2866741_+|methylenetetrahydrofolate-reductase	gnl|CDD|236321	PRK08645, PRK08645, bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed.	2.85979e-86
NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein	gnl|CDD|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	4.997e-96
NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein	gnl|CDD|236936	PRK11608, pspF, phage shock protein operon transcriptional activator; Provisional.	0.0031188
NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	1.84119e-07
NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase	gnl|CDD|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	3.45494e-08
NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein	gnl|CDD|197270	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium. Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins, which show high sequence homology to the endonuclease from Salmonella typhimurium and vertebrate phospholipase D6. Nuc and PLD6 belong to the phospholipase D (PLD) superfamily. They contain a short conserved sequence motif, the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), which characterizes the PLD superfamily and is essential for catalysis. Nuc and PLD6 utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit. However, proteins in this subfamily have two HKD motifs in a single polypeptide chain.	3.52459e-45
NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein	gnl|CDD|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	0.00177361
NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NC_019780.1|WP_041235898.1|2864137_2865178_-|rod-shape-determining-protein	gnl|CDD|237562	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional.	0
NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	1.42964e-10
NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.32512e-12
NC_019780.1|WP_156800806.1|2878313_2880329_+|hypothetical-protein	gnl|CDD|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	2.99169e-12
NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	8.03309e-07
NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein	gnl|CDD|238920	cd01945, ribokinase_group_B, Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .	2.55565e-05
NC_019780.1|WP_015230361.1|2863700_2864057_-|iron-sulfur-cluster-assembly-accessory-protein	gnl|CDD|272875	TIGR00049, Uncharacterized_protein_in_nifU_5'region, Iron-sulfur cluster assembly accessory protein. Proteins in this subfamily appear to be associated with the process of FeS-cluster assembly. The HesB proteins are associated with the nif gene cluster and the Rhizobium gene IscN has been shown to be required for nitrogen fixation. Nitrogenase includes multiple FeS clusters and many genes for their assembly. The E. coli SufA protein is associated with SufS, a NifS homolog and SufD which are involved in the FeS cluster assembly of the FhnF protein. The Azotobacter protein IscA (homologs of which are also found in E.coli) is associated which IscS, another NifS homolog and IscU, a nifU homolog as well as other factors consistent with a role in FeS cluster chemistry. A homolog from Geobacter contains a selenocysteine in place of an otherwise invariant cysteine, further suggesting a role in redox chemistry. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.46603e-51
NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein	gnl|CDD|371670	pfam11691, DUF3288, Protein of unknown function (DUF3288). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.12535e-36
NC_019780.1|WP_041235496.1|2865373_2865733_+|single-stranded-DNA-binding-protein	gnl|CDD|180986	PRK07459, PRK07459, single-stranded DNA-binding protein; Provisional.	3.66394e-58

Protein sequences

>NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MQRPIYLDCHATTPVDPRVLDAMMPYFTEHFGNPSSVSHAYGWEAEAGVKQAREIIAEAINASPEEIVFTSGATEANNLAIKGVAEAYFSQGQHIITVATEHRAVIDPCKYLESLGFEITFLTVGEDGLIDLDILEKSIRSDTILVSVMAANNEIGVLQPLKEIGALCREKGVLFHTDAAQAIGKIPLDVEAMNINLMSLTAHKLYGPKGIGALYVRRRNPKVYLKSQIQGGGQERELRSGTLYPPQIVGFGKAVALGLAEMETEGERLEKLRDRAMEKLLQLEGVYLNGDRAQRLPNNLNISVAGVDGTALILGLQPVIAVSSGSACSSQSVAPSHVITALGRSKTLANASIRFGMGRFTTAEDIDRAVDHTITTIQSLRKAKQ
>NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein
MSKCCLFVGITTLDLIYLAPHLPQANEKLSAIDSAAKIAAESCRFFGTRNWMESNGNSD
>NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein
MTEIPEQKHPREKEDHAIIEQMFQEDITDYNLAELARLRIRYKSFPGAKSLQRDLDDLLAKWDLTEELLFEKTRKNHQQRKVYRPADTEEENWL
>NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein
MNYPFYIVDVFAVAKYTGNQLAVFPQADQISDQQMQEFAKEINFSETTFITTSSPTENEYDVRIFTPNQELPFAGHPTLGTAYIIREYLMSKQEKENQAEITLNLKVGKIPVRLETTEQGEEVLWMQQNQPEFGQSISPETIATVLGISEKDINPNFPIQEVSTGIYFLIVPINRLEVLKQIKVNLEQYYQLIFSLKAKSILVFCPETYSPENDLCVRVFADYLAIPEDPATGSANGCLAAYLFNNNVFPIQGNRLEVKVEQGYEINRPSLLFLQASEDKIKVGGQVKTIAQGNFI
>NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein
MRKLIPFIFGVSVLITPQFSAIGGEAKNQTFTANNEQINTQLLSRGAHYRAWELRGNEALEAGNYDRAIALYDRAIAVDTDQPSAWERRGDALVKKEEYQAAIEAYNEAMNLSTKTETQLETKIEATREKLGDQLSS
>NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein
MLTRLVLVLVSSSLFLTLSSCNRNNSPEIIRPQPLPQDELIKVYFNQNQAEGANYTDPYRNIDRSGDNLEQIIINNIEDAQDTIEIAVQEFRLPKIAQSLAKKQQNGVNIRVIIENDYRRPFSDYSPEEIKQSTGREKNSLQAGFNFIDLNRDGIISQEESKKRDALIILENAGIPILDDTADGTKGSGLMHHKFMIVDGKISLVASNNFTLSGIHGDLEAPNTRGNANNLVTIRNSELASIFQEEFDLMWGDGVGKKPDSVFGVKKGNRMFPPILVGESAVSVHFSPLSKTQSWQDSSNGFIGEKLAKAETSVNFALFVFSEQKIADILAKGYEREVNIKGLIEPSFAYRYYSEGLDMLGVALARNCKFEKNNNPWEAAISTVGIPQLPEGDLLHHKFAVVDEKVVITGSHNWSASANYQNDETVLVIENPTVAAHYQREFERLYDRSVLGIPQWLQERVKEQEKECS
>NC_019780.1|WP_156800803.1|2865820_2866741_+|methylenetetrahydrofolate-reductase
MMSRFRQAVEAQEFLVTAEVTPPKGGNPDRMLQVAQSLKGRVHAVNITDGSRAVLRMSSLAASVVLLRNDIEPVCQVACRDRNLIGIQSDLMGAQALGIRNILALTGDPVKAGDHPKAKAVFNLESVRLLKLIQKLNEGTDFNDKPLTDGALDLFAGAAVDPQSDSWSGLQRRFEQKVKAGAQFFQSQMLTDFDRLEKFMDEVASPAKKPILAGIFLFKSAKNARFIQKYVPGVHIPEEIIERLDRASDPLQEGIKIAAEQVQTARQLCQGVHMMAVKKEEAIPSILDLAGVKPVEGVKLPTAATR
>NC_019780.1|WP_041235496.1|2865373_2865733_+|single-stranded-DNA-binding-protein
MNLNVVHLVGRAGVDPEIKYFESGKVLCKFPIAVDRRTKKDDKPDWFELEMWGRTAEIASEYVRKGKQVGIQGKLKIDTWQDQNGNNRSSPRIAVDRLDLLGSKGDTQGGSSYDRPDEF
>NC_019780.1|WP_041235898.1|2864137_2865178_-|rod-shape-determining-protein
MSFWNRLSFSRNMGVDLGTANTLVYVSGKGIVLKEPSVVAIDQDNKEALAFGEDAKQMLGRTPGSIVASRPLRDGVIADFDSAELMLQHFIKRAHGGRTLVSPRIVIGIPSGVTGVEKRAVMEAALQAGARDVFLIDEPVAAAIGAGLSVAEPTGNMIIDIGGGTTEVAVLSLQGTVLSESVRVAGDELSDSITQYMKKVHNLVIGERTAEEIKIRVSSAYPTEGDDDLSMEVRGLHLLSGLPRMVAIKAPEIRESMSEPLSVIVEAVKRTLERTPPELASDIINQGIMLAGGGALLRGLDTLITHETGIVTHVAPDPLQCVVLGTGNVLENFKQLGRVFTGSSSS
>NC_019780.1|WP_015230361.1|2863700_2864057_-|iron-sulfur-cluster-assembly-accessory-protein
MTQAIQSQQQGIQLSETALTHLNKLREEQGKDLCLRVGVRNGGCSGMSYLMDFEDPSNVREDDEVFDYDGFKIICDPKSLLYIYGLQLDYSNALIGGGFQFTNPNASQTCGCGKSFGV
>NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein
MFISPDYLLPNWQNALTELASSGRLLTAAQEALQLETIPDSLFDQRGSDRVVNGTVDLGAVEVQDEDPGNELPITNEPSADEQYLLELINRMRINPSEELDLLLNAGNPNVDNAISFFEVDIEELQSQWSSLTSVAPLAWSEVLKEAAIGNNDYQVSIDGTGHAPNLGQRFTDAGYNFSRAGENAFAQADSAFQAHAAFAIDWGFTPTGIQDPPGHRNSIMSDSFREVGLEVREEDNPETAVGTVIVSQEFGNRSDFGSPRLLGVVYNDGAIADDDFYTPGEGISDVVITVADQTDSSNIFTTTTREEGGYQIELPSGSYEVTFNGDFNGDGEEDTYNDVVIIEAENVKLDVDNDVQGDENQPPTITPEFFGINADSPVGTVIGEVTATDPDEDELTFEITEGNEDLDGDGEVAFTIDENGEITVNDTDDLDFESQNSFMFGVTVTDEEGLTVTEMITVNLETEPEDPSVLSAVDDLVFGTSNNDTLNAADQNNLYTGNNQITFTGAGEDLVDGSIGGDGSNRNYGGSNADELFAGNNDRLFGEGGNDTLDASQGTGNNRLYGGDDNDDLIAGNNDLLTGGNGDDRLLVRQGGNNLLIGNSGADQFWIATDEIPNSPNTITDFTSGEDAIGFGGFPDLSFNDLIVNQNGENTIIGLEANNPIAELQGVQANTLTENDFVFAAQSPQ
>NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein
MVASDERRDRAKFNPISQRTRALDIELEPKLQAEDFSLNQRYSSLVWQALEQEKISESKAAELLGMTIERLRLTRMEQEVYAVA
>NC_019780.1|WP_156800804.1|2876578_2876776_+|hypothetical-protein
MMSSLVARCREATALRASRSLPQTRSRPLSQARSRPLPQQRSHPELEFLTPIIYNHLVGSSLLIL
>NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein
MVTGHCLLLPRLPETLWLRVLGRGRVQKEAIDELEALSENNPFRQRALELLYTLQNNLKSKQELPSEDRELIMRLEPLYQQEKEKLVREAQKRGMEIGEERGEERTQREIAANLLSMGMEVEQIAQATGLSPKEVMKLINQNSDDQ
>NC_019780.1|WP_156800806.1|2878313_2880329_+|hypothetical-protein
MSMSLNPLFLTWENALTELATSGRLLTAAEDALQLETIPDPLTELIKQWQTGDFSQLPAVELLSYESMSGAMGAYASSGETIYLNQDWLATASEEDALAVLMEELGHHLDHVANERDTLGDEGAIFASLLQGEGLRDELREEDDRATLNLDGELVTVEQAEFEVTTAEDGSVSGTLRGEIVRANAIPGTDTITFDGSLAGETILLNEALNITDSLIIEASETGGMTIDAQGNSRVFLIDDGNSQNSIRVSMDGLTIIGGNTEDGAGIFNRETVNLTNTTISGNSASDDGGGIFNEGTVNLTNTTISGNSASDDGGGIWSRETINLTNSIIANSTGGGDVYNYYGRPDVNTYGANIVEDGSVRGAVQIDPNLSPLQDNGGGTLTHIPLEGSLAIDLGDNSVLPADTQDIDGDGDVEEPLPFDQRGLNRVIGDAVDLGAVETGNNGGGGNQAPVAEDDTASTGSNTALSQNVLSNDSDAEGDSLTVSAVNGEESNVGTEFELPSGALLTLNADGSFEYDPNNAFDNLAEGETTTDRFSYTVSDGNDGTDTANVAIDITGVPVPSFNLDVDNNGVADPFTDGLTIFRFLGGLNPETYELASDADRSVTAVQEFLFGGETFLDVDNNGVADPFTDGLTIFRFLGGLNPETYELASDADRSVAEIQEFLQPFLDAV
>NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase
MAQQIITTEELLSVISGQDLATIVVEYSTEDPLNSPARGLGFKLHYDSSQLQFEDFSDVFTFGAQPQDFTQLAPQDDRNDLDNNPQTDQVISFLYADPDVFSNPSATLDWPLADNNIDSLPVSLFAVNFDSSNLETETVVNFTLSQVQEGFDNQRNEILSTTTIIPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYEIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDRSTLNLTLAQVQEGFDNQRNEILSTTTIIPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYDIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDQSTFNLTLAQVQEGFNNQRNELVNSLEIEAVLGNPPIVENFLDNITLTQGELPDPINLFDTFEDTEDDDANLTYTVVENTNSELVETALDTESGELNLIPATAAGSSEITIEATDSQGLRVRETFTLTINRQNGKPSINAPLNEITLTHGENLDPINLFDTFQDDQDTDEELKLTANSSNKNLVRTALDSNTGRLFLQFPSTRTGTSEITVRAKDTSGFTTTETFTVTVNPSGEAISLEENNDTLETASTPQLSPNTPNLNLAGEIGDNNFGDQDIDLYRLELQKGDQLTADINTDDNSSLDSFLRLFDSFGQQVERNDDSQQGENDSLLEFSADTSQTYYIGVSGFGNDQYKPNLENSGSKGDTGSYNLALTLTSTASETPNDTISQAIATSALIQENGQFQQPGFLGDNSTLNNPNLDVDFYEIQLTQGETATIDIDTTENSPLNPILRIFNATGGNVPNGFNDNAKAPGEQLGNDPYLEFTAPFSGTYYVGISDQANDLYSPYNPESGQSPGATGAYEINITQDVSREDSPPEASPNDTLDTATALLVGDEIQGNIGDRTEFVTVPGLDVDLYTLTLEADQAININANPTSRLDPILRLFNANGEEIAFNDDIGDSNNARIDFRVPDNGDYFLGVSGFDNSNYNPEQEGSGAPFASTGSYQLIVTEQETPELEAGEEEENDTLDTATATSLTADSLGSLKQTNAIGNNPNLEEAGLDVDIFQVELDTNTRLTAEINTENFNSDFDSLLRVFNSEGEQLDFNDDESSDNLDSQLEFIPTAAGTYYVGVSGLGNEKYNPKTVSSGNVGSIGDYEIELRLNEVTPQENPTNETPETASQVNLTNNRFSTNGVIGDNTNVEVDRDFYEIDLEQGSILNIRVNGDNLESFVRLFNSKDEEIPLEYEAGDFPHPSLNLTIPEDDTYFLQISAFDNNEDGIPDDSIGDYRLNLAVAPPPLAAQPPVEEIRPTANNDRFRAASQRTAIFNVLGNDSANDDQGFLEITDFTATTEKGGTVELDNQSRLRYTPNPDFGGVDTFTYTVANESGGFDQGTVEVNVNRPPEGASVQVELDVRSVPGKEDQLNDGLQIGEEFIVDVRFLDRVNSENPSQAVRSGYADLRFNPNQLQVVTDTDIDNDQITDGIIRYPEYPGGRKGTVRNAEGLVDEVGGFSISQDPPEAENRIFSLHLQAIGGGNTALFASEAGQQIGSAITLFDTFITDQRNQTNFPEIDIATVTNSETVESAFPVNLANNNVIEQGEISGVQGIIEAMQVNIDFQDLAGNSLEDVAVGEEFKIVLSAEDLRPDGQQLGVFSVFADVFYDTVLIDVTEAELVGDFASPVLELPTAVEQGSGEGLIDELGGTKENFNPVRSGSQTFAELTVTAKAPGQLDVSTNAPEGKTAKNTLFGVDVEVTEGTVYSEKRLDILGETEEGNPDLVITEFDAVVDHVLGGETEVNLTVENQGDGTSPGFQVEILYYTADDLGELEEEEPMVVKTLAFEELTESRSETAAVSLPVEVMLAEALEDDPSVFGETVPDEGFFESNNIDYLGVRLVNSESSGETTEEFTNNGVDGTEGVNVDDIAYFPWDVVNNNGDGVIAGEEDDLISDRQVTPVDANFVFENIGEVITDEVVESQQVGTEGLDLSRIDLDLDGAISPVDAVRVANRIGYEINPNIFEESVG
>NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein
MTRLIHDKFAKDYFESLLEPFGQINSQKRVSAEDQYIDVWFEPAPENLEELKELGVLGRMATTPSMFEPYRNPVTPEQIGDCLLKLLLVRTQMKRQARRKESSLAEESVPRLWILTPTASSTVLSGFNAMQTPDELEGFYTLGSSLSTNIIVIHQLPRTEETLWLRVLGRGRVQKEAIDELEALSENNPFRQRALELLYTLQKGLQSKQDIESEDRELIMRLEPLYQQEKEKLVRDAEERGEERTQREIAANLLSMGMEVEQIAQATGLSRKQVMKLINQNSDDQ
>NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein
MRLEPLYQIEREQRDREVKQLTQREIAANLLNKGMEIQEIAEATGLSPEEVTKLINQNSDDQ
>NC_019780.1|WP_015230375.1|2888917_2889100_+|hypothetical-protein
MRLEPLYQQEKETLDREAQKRGMEIGEEHAQKRFAQKLLSKGMEIEQIAELTLAFPRRDY
>NC_019780.1|WP_156800807.1|2889111_2889249_+|hypothetical-protein
MMSSLVAQCREVTALRASRPELKFLPSIMYNRLVSLGINFLNWCC

Crispr_ID: NC_019780_38

• CRISPR_ID: NC_019780_38
• CRISPR_location: 2879160-2879265
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_38

Consensus_repeat	Method
AATTCCGCTTCTGATGATGGGGGGGGGATTT	CRISPRCasFinder

spacers of NC_019780_38

>38.1|2879191|44|NC_019780|CRISPRCasFinder
TTAACGAAGGAACTGTAAACCTAACCAATACAACCATCTCTGGT

CRISPR arrays and Neighbor proteins around NC_019780_38

CRISPR arrays

The CRISPR arrays of NC_019780_38

>merge|NC_019780|38|2879160-2879265|CRISPRCasFinder
AATTCCGCTTCTGATGATGGGGGGGGGATTTTTAACGAAGGAACTGTAAACCTAACCAATACAACCATCTCTGGTAATTCCGCTTCTGATGATGGAGGGGGGATTT

>NC_019780|38|37|2879160-2879265|CRISPRCasFinder
AATTCCGCTTCTGATGATGGGGGGGGGATTT	TTAACGAAGGAACTGTAAACCTAACCAATACAACCATCTCTGGT
AATTCCGCTTCTGATGATGGAGGGGGGATTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl|CDD|223461
NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein	unknown	unknown	gnl|CDD|236936
NC_019780.1|WP_156800895.1|2891984_2897282_+|pre-peptidase	unknown	unknown	gnl|CDD|367843
NC_019780.1|WP_083874499.1|2913909_2919333_+|pre-peptidase	unknown	unknown	gnl|CDD|375409
NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase	unknown	unknown	gnl|CDD|380078
NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein	unknown	unknown	gnl|CDD|197270
NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein	unknown	unknown	gnl|CDD|376890
NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|184450
NC_019780.1|WP_015230376.1|2889493_2891041_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|276809
NC_019780.1|WP_015230381.1|2924704_2925613_+|hypothetical-protein	unknown	unknown	gnl|CDD|223469
NC_019780.1|WP_015230380.1|2919447_2924535_+|pre-peptidase	unknown	unknown	gnl|CDD|333740
NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein	unknown	unknown	gnl|CDD|206637
NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein	unknown	unknown	gnl|CDD|238920
NC_019780.1|WP_156800807.1|2889111_2889249_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800804.1|2876578_2876776_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein	unknown	unknown	gnl|CDD|371670
NC_019780.1|WP_015230375.1|2888917_2889100_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein	gnl|CDD|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	4.997e-96
NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein	gnl|CDD|236936	PRK11608, pspF, phage shock protein operon transcriptional activator; Provisional.	0.0031188
NC_019780.1|WP_156800895.1|2891984_2897282_+|pre-peptidase	gnl|CDD|367843	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain. This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (pfam00801) domain, which also are found in this context. Visual analysis suggests that PKD and PPC are distantly related (personal obs:Bateman A, Yeats C).	9.51549e-06
NC_019780.1|WP_083874499.1|2913909_2919333_+|pre-peptidase	gnl|CDD|375409	pfam17892, Cadherin_5, Cadherin-like domain.	1.77203e-15
NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	1.84119e-07
NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase	gnl|CDD|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	3.45494e-08
NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein	gnl|CDD|197270	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium. Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins, which show high sequence homology to the endonuclease from Salmonella typhimurium and vertebrate phospholipase D6. Nuc and PLD6 belong to the phospholipase D (PLD) superfamily. They contain a short conserved sequence motif, the HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue), which characterizes the PLD superfamily and is essential for catalysis. Nuc and PLD6 utilize a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit. However, proteins in this subfamily have two HKD motifs in a single polypeptide chain.	3.52459e-45
NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein	gnl|CDD|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	0.00177361
NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein	gnl|CDD|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	1.42964e-10
NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.32512e-12
NC_019780.1|WP_015230381.1|2924704_2925613_+|hypothetical-protein	gnl|CDD|223469	COG0392, COG0392, Predicted integral membrane protein [Function unknown].	0.000853062
NC_019780.1|WP_015230380.1|2919447_2924535_+|pre-peptidase	gnl|CDD|333740	NF012211, tand_rpt_95, tandem-95 repeat protein. This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.	9.18368e-08
NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	8.03309e-07
NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein	gnl|CDD|238920	cd01945, ribokinase_group_B, Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .	2.55565e-05
NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein	gnl|CDD|371670	pfam11691, DUF3288, Protein of unknown function (DUF3288). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.12535e-36

Protein sequences

>NC_019780.1|WP_156800805.1|2877056_2877497_+|hypothetical-protein
MVTGHCLLLPRLPETLWLRVLGRGRVQKEAIDELEALSENNPFRQRALELLYTLQNNLKSKQELPSEDRELIMRLEPLYQQEKEKLVREAQKRGMEIGEERGEERTQREIAANLLSMGMEVEQIAQATGLSPKEVMKLINQNSDDQ
>NC_019780.1|WP_156800804.1|2876578_2876776_+|hypothetical-protein
MMSSLVARCREATALRASRSLPQTRSRPLSQARSRPLPQQRSHPELEFLTPIIYNHLVGSSLLIL
>NC_019780.1|WP_041235499.1|2875146_2875401_-|hypothetical-protein
MVASDERRDRAKFNPISQRTRALDIELEPKLQAEDFSLNQRYSSLVWQALEQEKISESKAAELLGMTIERLRLTRMEQEVYAVA
>NC_019780.1|WP_015230371.1|2872770_2874831_+|hypothetical-protein
MFISPDYLLPNWQNALTELASSGRLLTAAQEALQLETIPDSLFDQRGSDRVVNGTVDLGAVEVQDEDPGNELPITNEPSADEQYLLELINRMRINPSEELDLLLNAGNPNVDNAISFFEVDIEELQSQWSSLTSVAPLAWSEVLKEAAIGNNDYQVSIDGTGHAPNLGQRFTDAGYNFSRAGENAFAQADSAFQAHAAFAIDWGFTPTGIQDPPGHRNSIMSDSFREVGLEVREEDNPETAVGTVIVSQEFGNRSDFGSPRLLGVVYNDGAIADDDFYTPGEGISDVVITVADQTDSSNIFTTTTREEGGYQIELPSGSYEVTFNGDFNGDGEEDTYNDVVIIEAENVKLDVDNDVQGDENQPPTITPEFFGINADSPVGTVIGEVTATDPDEDELTFEITEGNEDLDGDGEVAFTIDENGEITVNDTDDLDFESQNSFMFGVTVTDEEGLTVTEMITVNLETEPEDPSVLSAVDDLVFGTSNNDTLNAADQNNLYTGNNQITFTGAGEDLVDGSIGGDGSNRNYGGSNADELFAGNNDRLFGEGGNDTLDASQGTGNNRLYGGDDNDDLIAGNNDLLTGGNGDDRLLVRQGGNNLLIGNSGADQFWIATDEIPNSPNTITDFTSGEDAIGFGGFPDLSFNDLIVNQNGENTIIGLEANNPIAELQGVQANTLTENDFVFAAQSPQ
>NC_019780.1|WP_015230370.1|2870383_2871541_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MQRPIYLDCHATTPVDPRVLDAMMPYFTEHFGNPSSVSHAYGWEAEAGVKQAREIIAEAINASPEEIVFTSGATEANNLAIKGVAEAYFSQGQHIITVATEHRAVIDPCKYLESLGFEITFLTVGEDGLIDLDILEKSIRSDTILVSVMAANNEIGVLQPLKEIGALCREKGVLFHTDAAQAIGKIPLDVEAMNINLMSLTAHKLYGPKGIGALYVRRRNPKVYLKSQIQGGGQERELRSGTLYPPQIVGFGKAVALGLAEMETEGERLEKLRDRAMEKLLQLEGVYLNGDRAQRLPNNLNISVAGVDGTALILGLQPVIAVSSGSACSSQSVAPSHVITALGRSKTLANASIRFGMGRFTTAEDIDRAVDHTITTIQSLRKAKQ
>NC_019780.1|WP_015230369.1|2870203_2870383_+|hypothetical-protein
MSKCCLFVGITTLDLIYLAPHLPQANEKLSAIDSAAKIAAESCRFFGTRNWMESNGNSD
>NC_019780.1|WP_015230368.1|2869918_2870203_-|DUF3288-family-protein
MTEIPEQKHPREKEDHAIIEQMFQEDITDYNLAELARLRIRYKSFPGAKSLQRDLDDLLAKWDLTEELLFEKTRKNHQQRKVYRPADTEEENWL
>NC_019780.1|WP_015230367.1|2869014_2869905_+|PhzF-family-phenazine-biosynthesis-protein
MNYPFYIVDVFAVAKYTGNQLAVFPQADQISDQQMQEFAKEINFSETTFITTSSPTENEYDVRIFTPNQELPFAGHPTLGTAYIIREYLMSKQEKENQAEITLNLKVGKIPVRLETTEQGEEVLWMQQNQPEFGQSISPETIATVLGISEKDINPNFPIQEVSTGIYFLIVPINRLEVLKQIKVNLEQYYQLIFSLKAKSILVFCPETYSPENDLCVRVFADYLAIPEDPATGSANGCLAAYLFNNNVFPIQGNRLEVKVEQGYEINRPSLLFLQASEDKIKVGGQVKTIAQGNFI
>NC_019780.1|WP_015230366.1|2868280_2868694_-|tetratricopeptide-repeat-protein
MRKLIPFIFGVSVLITPQFSAIGGEAKNQTFTANNEQINTQLLSRGAHYRAWELRGNEALEAGNYDRAIALYDRAIAVDTDQPSAWERRGDALVKKEEYQAAIEAYNEAMNLSTKTETQLETKIEATREKLGDQLSS
>NC_019780.1|WP_015230365.1|2866874_2868284_+|hypothetical-protein
MLTRLVLVLVSSSLFLTLSSCNRNNSPEIIRPQPLPQDELIKVYFNQNQAEGANYTDPYRNIDRSGDNLEQIIINNIEDAQDTIEIAVQEFRLPKIAQSLAKKQQNGVNIRVIIENDYRRPFSDYSPEEIKQSTGREKNSLQAGFNFIDLNRDGIISQEESKKRDALIILENAGIPILDDTADGTKGSGLMHHKFMIVDGKISLVASNNFTLSGIHGDLEAPNTRGNANNLVTIRNSELASIFQEEFDLMWGDGVGKKPDSVFGVKKGNRMFPPILVGESAVSVHFSPLSKTQSWQDSSNGFIGEKLAKAETSVNFALFVFSEQKIADILAKGYEREVNIKGLIEPSFAYRYYSEGLDMLGVALARNCKFEKNNNPWEAAISTVGIPQLPEGDLLHHKFAVVDEKVVITGSHNWSASANYQNDETVLVIENPTVAAHYQREFERLYDRSVLGIPQWLQERVKEQEKECS
>NC_019780.1|WP_015230373.1|2880485_2886956_+|pre-peptidase
MAQQIITTEELLSVISGQDLATIVVEYSTEDPLNSPARGLGFKLHYDSSQLQFEDFSDVFTFGAQPQDFTQLAPQDDRNDLDNNPQTDQVISFLYADPDVFSNPSATLDWPLADNNIDSLPVSLFAVNFDSSNLETETVVNFTLSQVQEGFDNQRNEILSTTTIIPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYEIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDRSTLNLTLAQVQEGFDNQRNEILSTTTIIPDNSNQPRQLVIPELTTPTVQANQDFEVNLAYDIENLNPEITARGLNFRLHYNSEQVAFQELTTVFDFGGQGLEETQDQEDTQDFDGDSSTDRILTFLYSDPQIFSNPNAELNWPLNESNTTAEDLPLDLVTVNFEALGRFDQSTFNLTLAQVQEGFNNQRNELVNSLEIEAVLGNPPIVENFLDNITLTQGELPDPINLFDTFEDTEDDDANLTYTVVENTNSELVETALDTESGELNLIPATAAGSSEITIEATDSQGLRVRETFTLTINRQNGKPSINAPLNEITLTHGENLDPINLFDTFQDDQDTDEELKLTANSSNKNLVRTALDSNTGRLFLQFPSTRTGTSEITVRAKDTSGFTTTETFTVTVNPSGEAISLEENNDTLETASTPQLSPNTPNLNLAGEIGDNNFGDQDIDLYRLELQKGDQLTADINTDDNSSLDSFLRLFDSFGQQVERNDDSQQGENDSLLEFSADTSQTYYIGVSGFGNDQYKPNLENSGSKGDTGSYNLALTLTSTASETPNDTISQAIATSALIQENGQFQQPGFLGDNSTLNNPNLDVDFYEIQLTQGETATIDIDTTENSPLNPILRIFNATGGNVPNGFNDNAKAPGEQLGNDPYLEFTAPFSGTYYVGISDQANDLYSPYNPESGQSPGATGAYEINITQDVSREDSPPEASPNDTLDTATALLVGDEIQGNIGDRTEFVTVPGLDVDLYTLTLEADQAININANPTSRLDPILRLFNANGEEIAFNDDIGDSNNARIDFRVPDNGDYFLGVSGFDNSNYNPEQEGSGAPFASTGSYQLIVTEQETPELEAGEEEENDTLDTATATSLTADSLGSLKQTNAIGNNPNLEEAGLDVDIFQVELDTNTRLTAEINTENFNSDFDSLLRVFNSEGEQLDFNDDESSDNLDSQLEFIPTAAGTYYVGVSGLGNEKYNPKTVSSGNVGSIGDYEIELRLNEVTPQENPTNETPETASQVNLTNNRFSTNGVIGDNTNVEVDRDFYEIDLEQGSILNIRVNGDNLESFVRLFNSKDEEIPLEYEAGDFPHPSLNLTIPEDDTYFLQISAFDNNEDGIPDDSIGDYRLNLAVAPPPLAAQPPVEEIRPTANNDRFRAASQRTAIFNVLGNDSANDDQGFLEITDFTATTEKGGTVELDNQSRLRYTPNPDFGGVDTFTYTVANESGGFDQGTVEVNVNRPPEGASVQVELDVRSVPGKEDQLNDGLQIGEEFIVDVRFLDRVNSENPSQAVRSGYADLRFNPNQLQVVTDTDIDNDQITDGIIRYPEYPGGRKGTVRNAEGLVDEVGGFSISQDPPEAENRIFSLHLQAIGGGNTALFASEAGQQIGSAITLFDTFITDQRNQTNFPEIDIATVTNSETVESAFPVNLANNNVIEQGEISGVQGIIEAMQVNIDFQDLAGNSLEDVAVGEEFKIVLSAEDLRPDGQQLGVFSVFADVFYDTVLIDVTEAELVGDFASPVLELPTAVEQGSGEGLIDELGGTKENFNPVRSGSQTFAELTVTAKAPGQLDVSTNAPEGKTAKNTLFGVDVEVTEGTVYSEKRLDILGETEEGNPDLVITEFDAVVDHVLGGETEVNLTVENQGDGTSPGFQVEILYYTADDLGELEEEEPMVVKTLAFEELTESRSETAAVSLPVEVMLAEALEDDPSVFGETVPDEGFFESNNIDYLGVRLVNSESSGETTEEFTNNGVDGTEGVNVDDIAYFPWDVVNNNGDGVIAGEEDDLISDRQVTPVDANFVFENIGEVITDEVVESQQVGTEGLDLSRIDLDLDGAISPVDAVRVANRIGYEINPNIFEESVG
>NC_019780.1|WP_015230374.1|2887794_2888652_+|hypothetical-protein
MTRLIHDKFAKDYFESLLEPFGQINSQKRVSAEDQYIDVWFEPAPENLEELKELGVLGRMATTPSMFEPYRNPVTPEQIGDCLLKLLLVRTQMKRQARRKESSLAEESVPRLWILTPTASSTVLSGFNAMQTPDELEGFYTLGSSLSTNIIVIHQLPRTEETLWLRVLGRGRVQKEAIDELEALSENNPFRQRALELLYTLQKGLQSKQDIESEDRELIMRLEPLYQQEKEKLVRDAEERGEERTQREIAANLLSMGMEVEQIAQATGLSRKQVMKLINQNSDDQ
>NC_019780.1|WP_041235503.1|2888697_2888886_+|hypothetical-protein
MRLEPLYQIEREQRDREVKQLTQREIAANLLNKGMEIQEIAEATGLSPEEVTKLINQNSDDQ
>NC_019780.1|WP_015230375.1|2888917_2889100_+|hypothetical-protein
MRLEPLYQQEKETLDREAQKRGMEIGEEHAQKRFAQKLLSKGMEIEQIAELTLAFPRRDY
>NC_019780.1|WP_156800807.1|2889111_2889249_+|hypothetical-protein
MMSSLVAQCREVTALRASRPELKFLPSIMYNRLVSLGINFLNWCC
>NC_019780.1|WP_015230376.1|2889493_2891041_+|hypothetical-protein
MLISLNPLFLTWENALTELANSGRLFTAAQEALQLKTIPDSLTELIKQWQTGDFSQLPAVELLSNNSMSGAMGAYASSGETIYLNEDWLATASEEDALAVLMEELGHHLDNVVNEKDAAGDEGAIFASLLQGKDFRDQVREEDDRATLEINGESVTVEQADNFKITPQLVENEITADGIQAGETFEIEFLFEDLITNSESNPNGVVLSGYTDVLFNPTSVLLAENGISYGEGYTTNQTGENRLGNNGEQVGRVSEVGAATSDVNAPASQVVFTLTFEAQTDFTLDPVTIEAEKPDEPKNLITIASSDEDQTRNTEYGQETIGPAVNIIESEGSTEVSEDGATDSYELVLNSQPTADVTIEISNIGQVSVEPTSLTFTPENWDTTQVVTVTATDDNFAEGEHTTPINHSVADGSADEYLDVGISNVAANIIEVQDGEGGNAPPIVEDTTFTIDNESLFSFLGEIVASDPDGDFLEFTIVDGNEDIDGDGIPPFVIDPFENIGEIFVDDIDDLQLAD
>NC_019780.1|WP_156800895.1|2891984_2897282_+|pre-peptidase
MTVEGITDNLPPVFDVATEQALDENTALVVAAVASDPDGDDLTFSFSGGADEALFTIDADGNLSFINPPDFENPEDDGEDNVYNVQVSVNDSQETVTEEFAVTINDVDETIPGPPQVVNPIDDFTINQEELPDPINLFDVFEDSEDADSDLTYRVLENTNNALIETALSAGELSFIPFSGGGSSDITVQATDTDGFSINYSFTITIDTPPEVVNPIDDRNIPSDSDPIRLNLFETFEDNQDDDSNLSFTVISSNPNLVSLSPVDEGSGRLFLQFPSNNEGSSEVTVTATDSNGLSREETFLVTVGASITTEEPNDTLVTATNTQLDLENQPNVTISGEIGDNSFENQDIDLYKMTLTQGDRLTADIDTNENSALDSILRIFDSNGLEVALNDDSNGETDSLVTFTVDEAVERATYYVGVSGFSNTSYNPNLENSGTKGSTGAYNLTLTLSSITGEEPANDTIPQAMEIASSLDEEGLFREEAFIGDNATFQANKDVDLYQVQLQQGETITIDLDTEVNSPLDLILQVFNATGGQVPTGFNDNAKAPGEQLGNDPYLEFSAPFSGLYYVGVSDQANDLYSPYNPESGQSPGATGAYEINITQDVSREDSPPEASPNDTLDTATALLVGDEIQGNIGDRTEFVTVPGLDVDLYTLSLEADQAISITLNSTSRLDPVLRLFNAQGEEIAFNDDIGNSNNSRIEFQVAETVETEDYLIGVSGFGNEDYDLNEEGSGAPFASTGSYQLIVTEQETPELEAGAEEENDTLDTATATSLTADSLGSLKQTNAIGNNPNLEEAGSDVDIFQVELDTKTRLTAEINTENLNTNFDSLLRIFNSEGEAVAFNDDETSNTLDSRLEFLPTTDGTYYVGVSGLGNEAYNPQTGENLKVGAIGDYEIEITLSEAIPPENPTNDTRETAIKAELANNRFTRNGFIGDHPNNVETDLDFYQVELSQGQTLNIEVNGRDSDLESFVELFKSDETDNLLEEEYDAGDFPHPEVSIEIEEDDTYFIRVSAFDDGTNDGKTGEYQLNLGVENAPAAAQAPIEEIRPSVNDDREFTNSDRAVTIDVLANDVANDDQGVNEINDDNFPKTTEKGGTVTVEDSSLIYTPDPDFAGVDTFTYTADNESGGSDQGTVSVTVNRPLEDSTVQVLLDVKPVPGKEEQLNDGLQIGEEFLVDVRFQDLLTDNNPSQAVVAAYADLMFDPQVLEVVENNETVDDEDGLVDGIIRNPSYGLGTKGQVRNEEGLVNEVGGGNLVSSPAALPDDNRVFSLHFRAIGGGNTALLASEAGQRPDSGINIIAGRGDQRDRTNFTRINAIEQITNLDGNNDIAPNLNLAMTNQMVTFQEEGVTGVQGVVEAMEVKVDFQDSAGNPLSEVAVGDTFEIVLSAEDLRPEQLGVFSAFADVVYDTVLIDVNEARLEEPFQSPVIDLSNAIQEGEGLVNEFGGSNSRLNPETGTQEVAIFTATAQAAGLLEVSTNAAEGETALNTLFGIDTDLTEATRYGENTLNIVGESVKGADLVITEFDAEIDHVLGGETTVNLTVANEGNAASSGFQVEVLYYTAESIDQLSEEEPQVVKTLAFDELEAEREVNEQSEVSLPVETLLAEALEDDPSVFGQKRPIDDDGEEGFFESNNIDYLGVRIVNSDNSGEEEEAFANNALNDTEGVNIDDIAFFPWDFVNSSEEGVLPNQDDEIVSDKIVDFNDANAVFRNIGEVITEEVTEGNRFGLDLDRIDFDLDGAISPVDAVRVANRIGYEINPDIFEESVG
>NC_019780.1|WP_083874499.1|2913909_2919333_+|pre-peptidase
MSVSNSNEAPVAENDTATTTQNTVLTFNASNGLLGNDSDPDSDSLTISTVEGEEANVGTEFELNSGALLTLNADGSYEYDPNGAFQSLNDGETATDSFTYTLSDGNGGTDTAEVTITVNGLSDNQPFSNIAGEWQFISPEDYLFEPGIGFTGGEPAFATPVIIIQNGNEVEISGIGTETGVGTIDRQQLIATIPIAVESDIEATAELSATLNEGETTIEGELLFSSPTLDSTASIPFTLLSQDSPGGDDLITGDEGDNFLVSGAGNDTLRGLAGNDSFGDFFGGGDDEFIGGDGFDVVFYTSGKASDYDLTQQDEEVWTIVDRRDIEDNNGTDRLEGIELLIFNDKEIPLPFPQEPNDTLASANNTQLNLEENPNVTLSGEIGDNNFENQDVDLYRVTLAKGQQLSAEINTDNSSSLDSILRIFDQNGTEVALNDDQKNDSTDSLVKFTVEDADRATYFVGVSGFDNRTYNPNLENSGTKGSTGEYNLTLTLTDSPLESPVNDTIPQAVDTASVLEEERLFREEAFIGDNATFQANKDVDLYQVQLQQGETITIDIDTEANSPLNLILQVFNANGGQVPQGFNNSGTAPDERDNNADPYLEFTAPFSGAYYVGISDEPNDLYTPFIAESGVAAGATGAYQIEISQNIAAEDAAPETNPNDTLDTATLITLGDQVQSTIGNRADFVTVPGLDVDIYFVSLNKGQEISISLNSTSRLDPVLRFFNSNGAEIAFNDDIGSSNNSFLELTIEETGNYYIGVSGFDNSNYDPEQEGSGAPFASTGSYELTVQEVGTVVNAEAETENDTLETATSTGLTPTGLTPEEQSSFKQTNAIGNNPNNANPGFDVDLFQVEVNAETVLTADINTANLDSLLHIFDENGNSVAFNDDESINSNDSFLEFQLDGDQQPGTYYVGVSGLGNEAYNPETGENLKVGAIGDYEIEINLAIAIPPENPTNDTRETAIKAELANNRFTRNGFIGDHPNVETDLDFYQVELSQGQTLNIEVNGRDSDLESFVELFKSDETDNLLEEEYDAGDFPHPEVSIEIEEDDTYFIRVSAFDDGTNDGKTGEYQLNLGVENAPAAAQAPIEEIRPSVNDDREFTNSDRAVTIDVLANDVANDDQGVNEINDDNFPKTTEKGGTVTVEDSSLIYTPDPDFAGVDTFTYTADNESGGSDQGTVSVTVNRPLEDSTVQVLLDVKPVPGKEEQLNDGLQIGEEFLVDVRFQDLLTENNPSQAVVAAYADLMFDPQVLEVVENNETVDDEDGLVDGIIRNPSYLVSTKGQVRNEEGLVNEVGGGNLVSSPAALPDDNRVFSLHFRAIGGGHTALLASEAGQRRDSGINIIDGRGDQRDRTNFTRINAIEQITNLDGNNDIAPNLNLAMTNQMVTFQEEGVTGVQGVVEAMEVKVDFQDSAGNPLSEVAVGDTFEIVLSAEDLRPEQLGVFSAFADVVYDTVLIDVNEARLEEPFQSPVIDLSNAIQEGEGLVNEFGGSNSRFNPETGTQKFAIFTATAQAAGLLEVSTKAAEGETALNTLFGIDTDLTEATRYGENTLNIVGESVKGADLVITEFDAEIDHVLGGETTVNLTVANEGDAASSGFQVEVLYYTADSIDQLSEEEPQVVKTLAFDELEAERDVNEQSEVSLPVETLLAEALEDDPSVFGQERPDDDGEEGLFESNNIDYLGVRIVNSESSGEEEEAFANNALNDTEGVNIDDIAFFPWDFVNSREDGVLPNQDDEIVSDNTVDFNDATAVFRNIGEVITEEVTEGNRFGLDLDRIDFDLDGAISPVDAVRVANRIGYEINPDIFEGEIA
>NC_019780.1|WP_015230380.1|2919447_2924535_+|pre-peptidase
MQANNIILNAEGIETEPNDVFENAVLTELSSQNPGVFGVTGTIGDNTELSVSGLDVDLYRVQLDAGHLLTATIDTIDLESPIDSSILRVFDNKGNEFLIEPFFSEQLSNGETGIEFIADTSATYFIGASGFGNEEYNPIRAGSGGFGKQGDYNLSLEVTPRETTTETNDTIPNAIVLDEELISEGFSTSEFIGDNQNLNNPKLDVDLYRISLSEGESIGIDIDTPDTSDLQLILRVFNSNGGGVAFSNDSLGTGGVESSDPFLNFTAPASDEYYIGVSDFNNDFYSAFTAETGNAPGATGSYNIEITSTDVEFEASEEPTNDTLQTATALELGSGLSGVAVVDGKIGDHPDFTTVPGLDIDLYQVELEENEQIGIEVAAQAINSPLDAILRVFDSEGQQIAFNDDFRSRDPVIGLTVAKEGTYYIGISGVGNNDYNPREAGTGSEPFASTGEYSLTIFSFGEVEIEEGPEERNDTINTATETELSPDRLGSFRTEAFIGNNNDPNLSDFSLDVDLFKVELAADSLLTADINTADLELRSQLDSVIQIFNGDGELITFNDDENGNTSDSFIKFTPEESGTYYLGISGLGNNGDPQAENPEQAGYDPTVAGSGIPGASTGGYILELFLENVPVEDPTNDTIDGAVITGLNRDSAGSVTESGIVGDNLELAADSLDVDLYQVELQIGDELSVNVAAAVLESELDAYLRIFNAEGEEVAFDDDSGEFSDSQLTFIPKTNGTFYVGVSGFGNINYDETTAESGSEAGSTGEYELTLNLTPGTPVEAVADELSTNESIVLESNLLSNDSGEGLVITAVNESTDDLGVELTTDQGALLTVNEDGSFSYNPDGQFDDLENGETETDSFSYIVTDAVGQTAQTTATLTILGVTPEAVVDAIADELTTEEQTVVESNLLDNDTPAEALSVTAVNGNADNLATETTTRNGAIITLTEEGNLVYDPNGQFDELNQGQTATDSFTYSVTDDQGNTDQTTVTINIEGVTQFEEVRPTANNDIALTASGGTVTIDVLANDTANDQFGDLEIGDFQTSTTKGGTITLDESGEKFLYTADSDFSGEDSFTYTIANESSGIDQGTVNLTVNPSDPNVNVELELREFDQEPGLIIGEEFLVDVRFRDLLTENNSGEAVVSGYADIVFDPTRLQIIENDPEQDDDGFAVDGIIHAEDFNGFRKGTVNNVEGIVDETGGFFPGAAPGNLPDDNTVFTLHMKATGGGEARIMGTTALASNAGEANNSAITIISQLADQRSQTNFGGLEIESLTSNITAMEISTRFEDLEGNPIEKIKVDEEFNIVLAAKDLRSEGDKLGVFSAFADVNYDTILADVTSVEPVEPFASPVIDLNQAINDDEGLLNDIGGTKSSFTPIPANNSPQDFAIITATAKAQGNFEVTTDVGDEITSLNTLFGLDNDVNSGTRYFGNTLTIEQDTTTNPVGTPDLVIKEFDAEIDHVLGGETTVNLTIANEGDAASSGFQVEVLYYTADSIDQLSEEEPQVVKTLAFDELEAEGGEVNEQSEVSLPVETLLAEALEDDPSVFGQQRPIDDDGEEGFFESNNIDYLGVRIVNSESSGEEEEAFANNALNDTEGVNIDDIAFFPWDFVNSGEEGVSENQEDEIVSDKIVDFNDATAVFRNIGEVITEEVTEGNRFGLDLDRIDFDLDGAISPVDAVRVANRIGYEINPAIIEESVG
>NC_019780.1|WP_015230381.1|2924704_2925613_+|hypothetical-protein
MVKVLRWFIFGLTFFFLAKTFQQHWREVAAIELNQSQLISGAIGLFLTLIAHIWSGIVWAGIIRFLQQPAPLFWVLPVYLQTNLAKYLPGNVWHFYGRIRAVQLAGSSLEAATLTTLLEPLLMATAAVLIALFTIQGGGLIILENTVYQWLPLGFAGAILLVIHPRFFNPILQFLSNLKNQSSTEDILLIKHYPWLPLLGEIGFVGLRGSGFLVTIAGFQPLSVSEIPLLLGVFSLAWFLGLVVPSPGGIGVFESSAIALLSPSFSVAILLSSLALFRLISISAEAIAAGLSWGIKLVIRGC

Crispr_ID: NC_019780_39

• CRISPR_ID: NC_019780_39
• CRISPR_location: 2982476-2982589
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_39

Consensus_repeat	Method
GTAGGTTGGGTGAAATGAAATGTAACCCAACA	CRISPRCasFinder

spacers of NC_019780_39

>39.1|2982508|50|NC_019780|CRISPRCasFinder
GAATTGGTCATTCGTCACTGGTCATTCGTCATTAGACAAAGGACAACAAT

CRISPR arrays and Neighbor proteins around NC_019780_39

CRISPR arrays

The CRISPR arrays of NC_019780_39

>merge|NC_019780|39|2982476-2982589|CRISPRCasFinder
GTAGGTTGGGTGAAATGAAATGTAACCCAACAGAATTGGTCATTCGTCACTGGTCATTCGTCATTAGACAAAGGACAACAATGTAGGTTGGGTGAAATGCAATGTAACCCAACA

>NC_019780|39|38|2982476-2982589|CRISPRCasFinder
GTAGGTTGGGTGAAATGAAATGTAACCCAACA	GAATTGGTCATTCGTCACTGGTCATTCGTCATTAGACAAAGGACAACAAT
GTAGGTTGGGTGAAATGCAATGTAACCCAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230415.1|2973256_2973463_-|hypothetical-protein	unknown	unknown	gnl|CDD|225269
NC_019780.1|WP_156800809.1|2977928_2978117_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein	unknown	unknown	gnl|CDD|319253
NC_019780.1|WP_015230416.1|2974517_2975525_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800808.1|2973702_2974263_-|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380293
NC_019780.1|WP_041235509.1|2975944_2976298_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein	unknown	unknown	gnl|CDD|371866
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|163057
NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl|CDD|236703
NC_019780.1|WP_041235508.1|2974247_2974457_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|176260
NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase	unknown	unknown	gnl|CDD|237013
NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase	unknown	unknown	gnl|CDD|131868
NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein	unknown	unknown	gnl|CDD|274135
NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230415.1|2973256_2973463_-|hypothetical-protein	gnl|CDD|225269	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only].	0.000124189
NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein	gnl|CDD|319253	cd16395, Srx, Sulfiredoxin reactivates peroxiredoxins after oxidative inactivation. Sulfiredoxin reduces and thereby re-activates 2-cys peroxiredoxins. Peroxiredoxins act as molecular switches, inactivating in response to hyperoxidation from hydrogen peroxide and other free radicals. Sulfiredoxin reactivates Prx-SO(2)(-) via ATP-Mg(2+)-dependent reduction. Arabidopsis sulfiredoxin has been described as a dual function enzyme, having nuclease activity in addition to the sulfiredoxin activity. This protein is similar to ParB N-terminal-like domain of bacterial and plasmid parABS partitioning systems.	8.62763e-38
NC_019780.1|WP_015230416.1|2974517_2975525_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.752e-27
NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NC_019780.1|WP_156800808.1|2973702_2974263_-|N-6-DNA-methylase	gnl|CDD|380293	NF033451, BREX_2_MTaseX, BREX-2 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated with PGL (phage growth limitation), a type 2 BREX (bacteriophage exclusion) system. The phage resistance appears not be restriction, but does manage to inhibit phage replication.	4.37554e-06
NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein	gnl|CDD|371866	pfam12049, DUF3531, Protein of unknown function (DUF3531). This family of proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 149 to 199 amino acids in length.	3.58791e-89
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	gnl|CDD|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	5.24366e-91
NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl|CDD|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	2.82153e-91
NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	gnl|CDD|176260	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	0
NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase	gnl|CDD|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	1.29308e-136
NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase	gnl|CDD|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	1.70231e-148
NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein	gnl|CDD|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	0
NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.75487e-69
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	9.25113e-17

Protein sequences

>NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein
MEVKDIPVRAIRRPLPRQNDPDQVKALMDSIEAEGLHEPIEVLEVDGKYYGFSGCHRYEAHQRLGKETIKCRVRRAPRAVLEKHLA
>NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein
MQTAEPKNTSAPVNIGIEESDRQAIAEGLSRLLADTYSLYLKTHYFHWNVTGPMFHSLHQMFEEQYVELATAVDDVAERIRTLGAVAPGSYSQFAELSTVPETRDVPEASEMVRLLVEANEAVVRTARAAFPAAERANDEATADLITERMRTHEKTAWMLRSMIQ
>NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein
MTTLTTSPTNLNFPLTAVVGQEAIKLALLLGAVDPKLGGIAISGKRGTAKSVMARAIHSLLPPIEIVQDSIANCDPKNPEEWDDETFTEYGDTTDIPTQVIRAPFVQIPLGVTEDRLLGSVDVEKSVKEGKTVFQPGLLAKAHRGVLYIDEVNLLDDQIANQLLSVLTEGRNIIEREGISFQHPCQPLLITTYNPEEKPLREHLLDRIAITLSADGVLALDQRVQAVEQATNFANSQKDFLGQYEEDLEGLRTDIILAREWLKEVTIAPEQINYLVEEAVRGVVQGHRAELFAVRVAKAAAALDGRNQVTGDDLRRAVELVIVPRSTVAQSPPEEQQPPPPPPENQEEDQPEDQEQPQGDNSPEDQPEPEQPPEDQQEESPQDDEGEEDEEQEAPQIPEEFVFDAEGVIMDPTVLYFSQMAKQQGTSGSRGLIFSDERGRYVKPMLPKGKVKRIAVDATLRAAAPYQKSRRLRNPGRRVIVEQSDMRSKRLARKAGALVVFLVDASGSMALNRMQSAKGAVLQLLTEAYENRDQVALIPFRGEQAEVLLPPTRSISMARNRLEKLPCGGGSPLAHGLTQAVHVGMNAQMSGDVGQVILVAITDGRGNIPLARSLGEPLPEEKPNIKEELLEIAGKIRALGVKLLVIDTENKFVSTGFAKELAKTAGGNYYHLPKATDQAIAGMAKQAISDLK
>NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MYLNHYTIGDYSPGASFIKQLFWYFIGCPFVRSYWLPVSSFKVFLLRLFGAKIGEGVRIKPGVLIKFPWRLSVGDYVWLGENLGIDNLAQVTIESHVCLSQGVYLCTGNHSWTDPNFKLITEPITIEEGSWIAARSVIGPGVTVKKGAVLGLGSVTGKSLDAMTIYGGNPAQAMKKRIINY
>NC_019780.1|WP_156800809.1|2977928_2978117_+|hypothetical-protein
MSRPDLRDVSYGNLRSDRACWERFRCHFLITIGLRRQMELQVQIIDRVSYEINPIFLLNAVS
>NC_019780.1|WP_041235509.1|2975944_2976298_-|hypothetical-protein
METIRPEIRQLRQQEETLQQMLSQSQQWLRLDDRAFREALSASLELLGASPLQSKNEEGIWEIPNLETLTNDPSWGNTLDTLRPPRPRKQKVWEWRKETEVRPVRIRIRTAAHSGEL
>NC_019780.1|WP_015230416.1|2974517_2975525_-|ParA-family-protein
MKPPIIAFFNNKGGVGKTSLVYHLAWMYFDLGLNVIAADLDPQANLTAAFIDEDRLEEVWEGNNSYNTIFRCVQPLLKGIGDIAMPELERIEDGLSLFIGDLQLSGFEDELSSQWHDCLDGKERAFRVISAFWRLLDRAANQSSADLVLVDLGPNLGAINRAALIAADYIIVPLSPDLFSLQGLKNLGPTVARWRKEWEARIEKNPANDLELPQGRMEAIGYIILQHGVRFDRPVKAFQRWIERIPIIYQDKVLQNPQTQVFDVASDPNRLALIKHYQSLRQMAQESHKPIFHLKPADGAIGAHLSAVRNVYFDFKELAEKIASQVELPLPSLTQ
>NC_019780.1|WP_041235508.1|2974247_2974457_-|hypothetical-protein
MGFDYETLKYIHQHREWLGFLQPVGLVVSPPALVNQGVYLDRDRAIEYQQLLSSLPTADFEPSKKSSQP
>NC_019780.1|WP_156800808.1|2973702_2974263_-|N-6-DNA-methylase
MIAALGTKISKRTPNTLPAGALYFQPTEERRRSGSHYTPRSLTAPVVDTTLQPIFQQLGSQPTPEQLLNLKVCDLAMGSGAFLVEACRQIADRLVEAWERNDAISPDTEEPVVIARRMVAQPCIYGVDKNPCLECVLHSGETPELRTRFAVNLAKLSLWLFTLSRDRPFTFLDHALKCGDSLVGLL
>NC_019780.1|WP_015230415.1|2973256_2973463_-|hypothetical-protein
MPNSPVIVINTSPLIALIAALGSLDILDSLYEKVVVPLAVCEEILKGGKQDFAVSEFQKAKWLSKEKM
>NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase
MSKLTLNAQHRCFGGSVSYYQHSSSACNAPMRFSVFLPPQANISPVPVLYFLSGLTCSEDNFTVKSGVQREAAELGIAIIAPDTSPRQTGIPEEDTDYDLGSGAGFYVDATQSPWQAHYQMYSYVVEELPQLIETEFPVIAGRRGIFGHSMGGHGALICALRNPHHYLSVSAFAPIAALKQCVWGRKALGHYLGSDQTLWNAYDATELVKQKTWLDKPILIDQGTEDQFLRQQQLLPDRFAEACETVGQSLTLRYQDGYDHSYFFVASFIRDHLQHHAQFLQ
>NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase
MDVKAAVAVEANQPLKLETVQLDPPQGREVLVEIKATGVCHTDAYTLSGKDPEGLFPSILGHEGAGVVVEVGKEVKTLKPGDHVIPLYTPECRECKFCLSQKTNLCQAIRSTQGKGVMPDGTSRFSLNGEKLHHFMGTSTFANYTVLPEIALAKIREDAPFDKVCYIGCGVTTGIGAVLFTAKVEAGANVVVFGLGGIGLNVIQGAKMVGADKIIGVDINPKKRPLAEKFGMTDFVNPNELDGDLVSYLVELTDGGADFSFECIGNVNIMRQALECCHKGWGVCTIIGVAGAGEEISTRPVQLVTGRVWKGSAFGGARGRTDVPKIVDWYMDGKINIDDLITHTLPIEQINEAFDLMHEGSSIRTVLTY
>NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase
MNVLVVGSGGREHTLAWKLLQSPNVEKVFCVPGNGGTALLPNCYNLPATEEDFVAITNYAQENAVSFVIVGPEVPLAKGIRDTLQEASIAVFGPRQAGAQIEASKWWAKALMLELGIPTATGETFTDATDAKAYVSEQTAPIVVKADGLAAGKGVTVAATREEANRAIDALFTAETEQVVVEECLTGEEISVLAVTDGITVRPLLPAQDHKRIGEGDTGANTGGMGVYAPAPLMNPTLMTQVIETVLQPTIDGLRERGIDYQGVLYAGLMITPQGEIKVLEFNCRFGDPETQAILPLLETPLDRIILACLEKRLDQLPPLIWSRKKALCVVAASQGYPGTYEKGKAITGITESPEALVFHGGTRLDHEGKLVTSGGRVLGVTGLGDDFEQAAACAYSAIEQIQFSGCYYRRDIGHRVRNVV
>NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein
MQIKFREFNPFDVWIWLEFDHVPSITERQYVEELFNSWFYLGKLGGFNAENFQVMETGVDINYMEYDLDRASNSLLSVMHNMSEFEYKETWGRCWFDLGTSDPVALDILLNSLQQLSQDFLNIQQVIIGGENEDWKINEKNQERFYQN
>NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase
MRFSIAHLGPTGTHTETATLAYTQWLKETQGQDSLLCPYPSIAQTLQAVAKQEADFAVVPVENSTEGSVTITLDTLWELETLQIQKALVLPITHSLLSRGTKLEEIKTVYSHPQALAQCQKALQKFLPQVQLIPTSSTVEALRDLNQDPENKTVGAIASSRASQLYNLPILIPSLNDYPDNCTRFWVVGLDAATNGKYISLGFTTPANQPGALVRPLSVFAQREINLTRIESRPTKRSLGEYLFFIDIEGNATQTDVHAALEDLPQYTEVLKIFGNYDVLTVD
>NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein
MLSFIVFYLQDYRQIIILFFLILWYIDGAIAHRYYRQFKNKFPISLESDRKQLIIKNNFAADQVIESQVDIDAVRSVSIRPKFLYSKGFKQNIGTVWQVILNINNGRELLVDEQFKSDRAVNRAFQQAKLITSQLEIPMIFNYSEGNCTDASQPLTFDDKFYVDRLQINRKPNRVHIYLKWKLTDTWQFLGEVIAQAGFLLFVIISTGFMVKFGSFLQEIYQFYWQKDFNFDLKNLLIFQQQADYFIILFAITIILIEGIRKSQTQHIYIEKNILRYKINRLEKARLNLTQLEAILFLPVPTPMVLVLTENEAMTINHLPSLDTYREMVEKIEAAITISPNNTH
>NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase
MRWDSRVVSFCECGSSWLWVAWNTLDEAYAFLENPKKQLSTDCLFFAEAPSKEAAIKAARSFLGSDLQVIGSEWAKEAFQTMNKQPPVKTIETVETQKSVPVTSDVQNSLEKSLEKLHSLIGLGKVKSTVQELVNITKVAKMQAEAGMKAPAITRHLVFTGNPGTGKTTVARILGEIYNHLGVLSKGHFTEVDRTALVAGYLGQTAPKTTQAVEAALGGVLFIDEAYSLVPEGRSDMFGQEAINTLLKMMEEHREDLVVIVAGYKGEMSRFINSNPGLKSRFARSIHFEDYSSLELAEIFKVMCEQQEYLLSENTLNRVQVLVKEFESQIGDLGNGRFVRNIFDRCVAIQCNRLAQLTNPSKEDLKTFLPSDVPTDEQLAQYLL
>NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein
MSNFLISLYLDEDVHVLVADLLQARGFDVITARDAGQQTVSKNDKLLADDQF
>NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein
MEISLTAKAEERLHKIVEYQGQSPSEVIEHALELLEDYQRWEDEQDVAEMEAVKQEIQEEGTIPWETVKANLGL
>NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MASALPVLSGREVVRVFQSFGWEVVRQSGSHIILVKEGELATLSVPDHREVAKGTLRSLIRTSGLTVSEFVSEI

Crispr_ID: NC_019780_40

• CRISPR_ID: NC_019780_40
• CRISPR_location: 2987803-2987935
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NC_019780_40

Consensus_repeat	Method
CGCCAAACCCAACACTAATTATAAG	PILER-CR

spacers of NC_019780_40

>40.1|2987828|29|NC_019780|PILER-CR
TAGATCAAAAGTAGGTTGGGTGCAGCCAG
>40.2|2987882|29|NC_019780|PILER-CR
TAGATCAAAAGTAGGTTGGGTGCAGCCAG

CRISPR arrays and Neighbor proteins around NC_019780_40

CRISPR arrays

The CRISPR arrays of NC_019780_40

>merge|NC_019780|40|2987803-2987935|PILER-CR
CGCCAAACCCAACACTAATTATAAGTAGATCAAAAGTAGGTTGGGTGCAGCCAGCGCCAAACCCAACACTAATTATAAGTAGATCAAAAGTAGGTTGGGTGCAGCCAGCGCCAAACCCAACACTAATTATAAG

>NC_019780|40|1|2987803-2987935|PILER-CR
CGCCAAACCCAACACTAATTATAAG	TAGATCAAAAGTAGGTTGGGTGCAGCCAG
CGCCAAACCCAACACTAATTATAAG	TAGATCAAAAGTAGGTTGGGTGCAGCCAG
CGCCAAACCCAACACTAATTATAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800809.1|2977928_2978117_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein	unknown	unknown	gnl|CDD|371866
NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein	unknown	unknown	gnl|CDD|319253
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	unknown	unknown	gnl|CDD|312506
NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|163057
NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl|CDD|236703
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|176260
NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase	unknown	unknown	gnl|CDD|237013
NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase	unknown	unknown	gnl|CDD|131868
NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein	unknown	unknown	gnl|CDD|274135
NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl|CDD|223854
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein	gnl|CDD|371866	pfam12049, DUF3531, Protein of unknown function (DUF3531). This family of proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 149 to 199 amino acids in length.	3.58791e-89
NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein	gnl|CDD|319253	cd16395, Srx, Sulfiredoxin reactivates peroxiredoxins after oxidative inactivation. Sulfiredoxin reduces and thereby re-activates 2-cys peroxiredoxins. Peroxiredoxins act as molecular switches, inactivating in response to hyperoxidation from hydrogen peroxide and other free radicals. Sulfiredoxin reactivates Prx-SO(2)(-) via ATP-Mg(2+)-dependent reduction. Arabidopsis sulfiredoxin has been described as a dual function enzyme, having nuclease activity in addition to the sulfiredoxin activity. This protein is similar to ParB N-terminal-like domain of bacterial and plasmid parABS partitioning systems.	8.62763e-38
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	gnl|CDD|312506	pfam08972, DUF1902, Domain of unknown function (DUF1902). Members of this family of prokaryotic proteins adopt a fold consisting of one alpha-helix and four beta-strands. Their function has not, as yet, been elucidated.	4.7595e-17
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	4.55194e-05
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	gnl|CDD|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	5.24366e-91
NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl|CDD|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	2.82153e-91
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.93951e-13
NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	gnl|CDD|176260	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	0
NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase	gnl|CDD|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	1.29308e-136
NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase	gnl|CDD|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	1.70231e-148
NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein	gnl|CDD|274135	TIGR02442, Uncharacterized_protein_Rv2850c/MT2916, cobaltochelatase subunit. Cobaltochelatase is responsible for the insertion of cobalt into the corrin ring of coenzyme B12 during its biosynthesis. Two versions have been well described. CbiK/CbiX is a monomeric, anaerobic version which acts early in the biosynthesis (pfam06180). CobNST is a trimeric, ATP-dependent, aerobic version which acts late in the biosynthesis (TIGR02257/TIGR01650/TIGR01651). A number of genomes (actinobacteria, cyanobacteria, betaproteobacteria and pseudomonads) which apparently biosynthesize B12, encode a cobN gene but are demonstrably lacking cobS and cobT. These genomes do, however contain a homolog (modelled here) of the magnesium chelatase subunits BchI/BchD family. Aside from the cyanobacteria (which have a separate magnesium chelatase trimer), these species do not make chlorins, so do not have any use for a magnesium chelatase. Furthermore, in nearly all cases the members of this family are proximal to either CobN itself or other genes involved in cobalt transport or B12 biosynthesis.	0
NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	5.75487e-69
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.04494e-16
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	9.25113e-17
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.000343328

Protein sequences

>NC_019780.1|WP_015230426.1|2986777_2987629_-|prephenate-dehydratase
MRFSIAHLGPTGTHTETATLAYTQWLKETQGQDSLLCPYPSIAQTLQAVAKQEADFAVVPVENSTEGSVTITLDTLWELETLQIQKALVLPITHSLLSRGTKLEEIKTVYSHPQALAQCQKALQKFLPQVQLIPTSSTVEALRDLNQDPENKTVGAIASSRASQLYNLPILIPSLNDYPDNCTRFWVVGLDAATNGKYISLGFTTPANQPGALVRPLSVFAQREINLTRIESRPTKRSLGEYLFFIDIEGNATQTDVHAALEDLPQYTEVLKIFGNYDVLTVD
>NC_019780.1|WP_015230425.1|2986167_2986614_+|DUF3531-family-protein
MQIKFREFNPFDVWIWLEFDHVPSITERQYVEELFNSWFYLGKLGGFNAENFQVMETGVDINYMEYDLDRASNSLLSVMHNMSEFEYKETWGRCWFDLGTSDPVALDILLNSLQQLSQDFLNIQQVIIGGENEDWKINEKNQERFYQN
>NC_019780.1|WP_015230424.1|2984749_2986015_-|phosphoribosylamine--glycine-ligase
MNVLVVGSGGREHTLAWKLLQSPNVEKVFCVPGNGGTALLPNCYNLPATEEDFVAITNYAQENAVSFVIVGPEVPLAKGIRDTLQEASIAVFGPRQAGAQIEASKWWAKALMLELGIPTATGETFTDATDAKAYVSEQTAPIVVKADGLAAGKGVTVAATREEANRAIDALFTAETEQVVVEECLTGEEISVLAVTDGITVRPLLPAQDHKRIGEGDTGANTGGMGVYAPAPLMNPTLMTQVIETVLQPTIDGLRERGIDYQGVLYAGLMITPQGEIKVLEFNCRFGDPETQAILPLLETPLDRIILACLEKRLDQLPPLIWSRKKALCVVAASQGYPGTYEKGKAITGITESPEALVFHGGTRLDHEGKLVTSGGRVLGVTGLGDDFEQAAACAYSAIEQIQFSGCYYRRDIGHRVRNVV
>NC_019780.1|WP_015230423.1|2983606_2984716_-|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase
MDVKAAVAVEANQPLKLETVQLDPPQGREVLVEIKATGVCHTDAYTLSGKDPEGLFPSILGHEGAGVVVEVGKEVKTLKPGDHVIPLYTPECRECKFCLSQKTNLCQAIRSTQGKGVMPDGTSRFSLNGEKLHHFMGTSTFANYTVLPEIALAKIREDAPFDKVCYIGCGVTTGIGAVLFTAKVEAGANVVVFGLGGIGLNVIQGAKMVGADKIIGVDINPKKRPLAEKFGMTDFVNPNELDGDLVSYLVELTDGGADFSFECIGNVNIMRQALECCHKGWGVCTIIGVAGAGEEISTRPVQLVTGRVWKGSAFGGARGRTDVPKIVDWYMDGKINIDDLITHTLPIEQINEAFDLMHEGSSIRTVLTY
>NC_019780.1|WP_015230422.1|2982597_2983446_-|S-formylglutathione-hydrolase
MSKLTLNAQHRCFGGSVSYYQHSSSACNAPMRFSVFLPPQANISPVPVLYFLSGLTCSEDNFTVKSGVQREAAELGIAIIAPDTSPRQTGIPEEDTDYDLGSGAGFYVDATQSPWQAHYQMYSYVVEELPQLIETEFPVIAGRRGIFGHSMGGHGALICALRNPHHYLSVSAFAPIAALKQCVWGRKALGHYLGSDQTLWNAYDATELVKQKTWLDKPILIDQGTEDQFLRQQQLLPDRFAEACETVGQSLTLRYQDGYDHSYFFVASFIRDHLQHHAQFLQ
>NC_019780.1|WP_015230421.1|2982147_2982408_-|hypothetical-protein
MEVKDIPVRAIRRPLPRQNDPDQVKALMDSIEAEGLHEPIEVLEVDGKYYGFSGCHRYEAHQRLGKETIKCRVRRAPRAVLEKHLA
>NC_019780.1|WP_015230420.1|2981514_2982012_-|DNA-starvation/stationary-phase-protection-protein
MQTAEPKNTSAPVNIGIEESDRQAIAEGLSRLLADTYSLYLKTHYFHWNVTGPMFHSLHQMFEEQYVELATAVDDVAERIRTLGAVAPGSYSQFAELSTVPETRDVPEASEMVRLLVEANEAVVRTARAAFPAAERANDEATADLITERMRTHEKTAWMLRSMIQ
>NC_019780.1|WP_015230419.1|2979166_2981245_-|magnesium-chelatase-subunit-D-family-protein
MTTLTTSPTNLNFPLTAVVGQEAIKLALLLGAVDPKLGGIAISGKRGTAKSVMARAIHSLLPPIEIVQDSIANCDPKNPEEWDDETFTEYGDTTDIPTQVIRAPFVQIPLGVTEDRLLGSVDVEKSVKEGKTVFQPGLLAKAHRGVLYIDEVNLLDDQIANQLLSVLTEGRNIIEREGISFQHPCQPLLITTYNPEEKPLREHLLDRIAITLSADGVLALDQRVQAVEQATNFANSQKDFLGQYEEDLEGLRTDIILAREWLKEVTIAPEQINYLVEEAVRGVVQGHRAELFAVRVAKAAAALDGRNQVTGDDLRRAVELVIVPRSTVAQSPPEEQQPPPPPPENQEEDQPEDQEQPQGDNSPEDQPEPEQPPEDQQEESPQDDEGEEDEEQEAPQIPEEFVFDAEGVIMDPTVLYFSQMAKQQGTSGSRGLIFSDERGRYVKPMLPKGKVKRIAVDATLRAAAPYQKSRRLRNPGRRVIVEQSDMRSKRLARKAGALVVFLVDASGSMALNRMQSAKGAVLQLLTEAYENRDQVALIPFRGEQAEVLLPPTRSISMARNRLEKLPCGGGSPLAHGLTQAVHVGMNAQMSGDVGQVILVAITDGRGNIPLARSLGEPLPEEKPNIKEELLEIAGKIRALGVKLLVIDTENKFVSTGFAKELAKTAGGNYYHLPKATDQAIAGMAKQAISDLK
>NC_019780.1|WP_015230418.1|2978124_2978670_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MYLNHYTIGDYSPGASFIKQLFWYFIGCPFVRSYWLPVSSFKVFLLRLFGAKIGEGVRIKPGVLIKFPWRLSVGDYVWLGENLGIDNLAQVTIESHVCLSQGVYLCTGNHSWTDPNFKLITEPITIEEGSWIAARSVIGPGVTVKKGAVLGLGSVTGKSLDAMTIYGGNPAQAMKKRIINY
>NC_019780.1|WP_156800809.1|2977928_2978117_+|hypothetical-protein
MSRPDLRDVSYGNLRSDRACWERFRCHFLITIGLRRQMELQVQIIDRVSYEINPIFLLNAVS
>NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein
MLSFIVFYLQDYRQIIILFFLILWYIDGAIAHRYYRQFKNKFPISLESDRKQLIIKNNFAADQVIESQVDIDAVRSVSIRPKFLYSKGFKQNIGTVWQVILNINNGRELLVDEQFKSDRAVNRAFQQAKLITSQLEIPMIFNYSEGNCTDASQPLTFDDKFYVDRLQINRKPNRVHIYLKWKLTDTWQFLGEVIAQAGFLLFVIISTGFMVKFGSFLQEIYQFYWQKDFNFDLKNLLIFQQQADYFIILFAITIILIEGIRKSQTQHIYIEKNILRYKINRLEKARLNLTQLEAILFLPVPTPMVLVLTENEAMTINHLPSLDTYREMVEKIEAAITISPNNTH
>NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase
MRWDSRVVSFCECGSSWLWVAWNTLDEAYAFLENPKKQLSTDCLFFAEAPSKEAAIKAARSFLGSDLQVIGSEWAKEAFQTMNKQPPVKTIETVETQKSVPVTSDVQNSLEKSLEKLHSLIGLGKVKSTVQELVNITKVAKMQAEAGMKAPAITRHLVFTGNPGTGKTTVARILGEIYNHLGVLSKGHFTEVDRTALVAGYLGQTAPKTTQAVEAALGGVLFIDEAYSLVPEGRSDMFGQEAINTLLKMMEEHREDLVVIVAGYKGEMSRFINSNPGLKSRFARSIHFEDYSSLELAEIFKVMCEQQEYLLSENTLNRVQVLVKEFESQIGDLGNGRFVRNIFDRCVAIQCNRLAQLTNPSKEDLKTFLPSDVPTDEQLAQYLL
>NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein
MSNFLISLYLDEDVHVLVADLLQARGFDVITARDAGQQTVSKNDKLLADDQF
>NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein
MEISLTAKAEERLHKIVEYQGQSPSEVIEHALELLEDYQRWEDEQDVAEMEAVKQEIQEEGTIPWETVKANLGL
>NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MASALPVLSGREVVRVFQSFGWEVVRQSGSHIILVKEGELATLSVPDHREVAKGTLRSLIRTSGLTVSEFVSEI
>NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKFNVTLDRDEDGIWIVECPSIPGCVSQGNTKEEALENIQDAIAACLQVRAERGFPLTIETQQVEVIA
>NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPKSFTPELKKRLKEAGCYFERSGKGDHEIWYSPITKCHFVVDQSIKSRHTANGVLKQAGLPKAF
>NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein
MSQLKYEVSAFWDKKAQVWVAESESVPGLATEAETLEALTQKLRTLVPELLQLNRIIEDTSAREIEIEITSHRQETIQLAT
>NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family
MSKWSSTKAKRVLKALKKIGWKLKRQTGSHKILERSGWNDVVFAFHDGEEIGPKMLARIAKLTGLTPDDL
>NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNYKIEIEQEEDGRYIAEIVELPGVLVYGNSQEEAILKVQALALRVLADQLEESELVENNLSLSFVTI

Crispr_ID: NC_019780_41

• CRISPR_ID: NC_019780_41
• CRISPR_location: 2993539-2993667
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_41

Consensus_repeat	Method
ACCCGATCGCGCTCTTATCAGTCAGAGAATTGAACCAAACCGCGAT	CRISPRCasFinder

spacers of NC_019780_41

>41.1|2993585|37|NC_019780|CRISPRCasFinder
GCCTTTGGCTCGGTCTCCGACCTACGCGCCTCCCCCT

CRISPR arrays and Neighbor proteins around NC_019780_41

CRISPR arrays

The CRISPR arrays of NC_019780_41

>merge|NC_019780|41|2993539-2993667|CRISPRCasFinder
ACCCGATCGCGCTCTTATCAGTCAGAGAATTGAACCAAACCGCGATGCCTTTGGCTCGGTCTCCGACCTACGCGCCTCCCCCTACCCGATCGCGCTCTTATCAGCCAGAGAATTGAACCAAACCGCGAT

>NC_019780|41|39|2993539-2993667|CRISPRCasFinder
ACCCGATCGCGCTCTTATCAGTCAGAGAATTGAACCAAACCGCGAT	GCCTTTGGCTCGGTCTCCGACCTACGCGCCTCCCCCT
ACCCGATCGCGCTCTTATCAGCCAGAGAATTGAACCAAACCGCGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235512.1|2994021_2994213_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein	unknown	unknown	gnl|CDD|378247
NC_019780.1|WP_015230442.1|2995964_2996189_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	unknown	unknown	gnl|CDD|312506
NC_019780.1|WP_156800897.1|2997259_2997340_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|163057
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_051017379.1|2996600_2997131_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|368240
NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein	unknown	unknown	gnl|CDD|378276
NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|224937
NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_156800811.1|2995295_2995460_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	2.82061e-05
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	gnl|CDD|312506	pfam08972, DUF1902, Domain of unknown function (DUF1902). Members of this family of prokaryotic proteins adopt a fold consisting of one alpha-helix and four beta-strands. Their function has not, as yet, been elucidated.	4.7595e-17
NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	2.27787e-12
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	4.55194e-05
NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase	gnl|CDD|163057	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K. Members of this protein family are the stage V sporulation protein K (SpoVK), a close homolog of the Rubisco expression protein CbbX (TIGR02880) and a members of the ATPase family associated with various cellular activities (pfam00004). Members are strictly limited to bacterial endospore-forming species, but are not universal in this group and are missing from the Clostridium group. [Cellular processes, Sporulation and germination].	5.24366e-91
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.93951e-13
NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein	gnl|CDD|378247	pfam09720, Unstab_antitox, Putative addiction module component. This entry defines several short bacterial proteins, typically about 75 amino acids long, which are always found as part of a pair (at least) of small genes. The other protein in the pair always belongs to a family of plasmid stabilisation proteins (IPR007712). It is likely that this protein and its partner comprise some form of addiction module - a pair of genes consisting of a stable toxin and an unstable antitoxin which mediate programmed cell death - although these gene-pairs are usually found on the bacterial main chromosome.	1.42539e-10
NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	1.92203e-13
NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein	gnl|CDD|378276	pfam09851, SHOCT, Short C-terminal domain.	0.000163974
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.04494e-16
NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	9.25113e-17
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.000343328

Protein sequences

>NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNYKIEIEQEEDGRYIAEIVELPGVLVYGNSQEEAILKVQALALRVLADQLEESELVENNLSLSFVTI
>NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family
MSKWSSTKAKRVLKALKKIGWKLKRQTGSHKILERSGWNDVVFAFHDGEEIGPKMLARIAKLTGLTPDDL
>NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein
MSQLKYEVSAFWDKKAQVWVAESESVPGLATEAETLEALTQKLRTLVPELLQLNRIIEDTSAREIEIEITSHRQETIQLAT
>NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPKSFTPELKKRLKEAGCYFERSGKGDHEIWYSPITKCHFVVDQSIKSRHTANGVLKQAGLPKAF
>NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKFNVTLDRDEDGIWIVECPSIPGCVSQGNTKEEALENIQDAIAACLQVRAERGFPLTIETQQVEVIA
>NC_019780.1|WP_015230431.1|2991690_2991915_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MASALPVLSGREVVRVFQSFGWEVVRQSGSHIILVKEGELATLSVPDHREVAKGTLRSLIRTSGLTVSEFVSEI
>NC_019780.1|WP_015230430.1|2991292_2991517_-|hypothetical-protein
MEISLTAKAEERLHKIVEYQGQSPSEVIEHALELLEDYQRWEDEQDVAEMEAVKQEIQEEGTIPWETVKANLGL
>NC_019780.1|WP_015230429.1|2990911_2991070_+|hypothetical-protein
MSNFLISLYLDEDVHVLVADLLQARGFDVITARDAGQQTVSKNDKLLADDQF
>NC_019780.1|WP_015230428.1|2989582_2990737_-|AAA-family-ATPase
MRWDSRVVSFCECGSSWLWVAWNTLDEAYAFLENPKKQLSTDCLFFAEAPSKEAAIKAARSFLGSDLQVIGSEWAKEAFQTMNKQPPVKTIETVETQKSVPVTSDVQNSLEKSLEKLHSLIGLGKVKSTVQELVNITKVAKMQAEAGMKAPAITRHLVFTGNPGTGKTTVARILGEIYNHLGVLSKGHFTEVDRTALVAGYLGQTAPKTTQAVEAALGGVLFIDEAYSLVPEGRSDMFGQEAINTLLKMMEEHREDLVVIVAGYKGEMSRFINSNPGLKSRFARSIHFEDYSSLELAEIFKVMCEQQEYLLSENTLNRVQVLVKEFESQIGDLGNGRFVRNIFDRCVAIQCNRLAQLTNPSKEDLKTFLPSDVPTDEQLAQYLL
>NC_019780.1|WP_015230427.1|2988468_2989503_+|hypothetical-protein
MLSFIVFYLQDYRQIIILFFLILWYIDGAIAHRYYRQFKNKFPISLESDRKQLIIKNNFAADQVIESQVDIDAVRSVSIRPKFLYSKGFKQNIGTVWQVILNINNGRELLVDEQFKSDRAVNRAFQQAKLITSQLEIPMIFNYSEGNCTDASQPLTFDDKFYVDRLQINRKPNRVHIYLKWKLTDTWQFLGEVIAQAGFLLFVIISTGFMVKFGSFLQEIYQFYWQKDFNFDLKNLLIFQQQADYFIILFAITIILIEGIRKSQTQHIYIEKNILRYKINRLEKARLNLTQLEAILFLPVPTPMVLVLTENEAMTINHLPSLDTYREMVEKIEAAITISPNNTH
>NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSSPARGEVWLVDLGYVAKVRPCLVISIPALMEDRALATLVPHTTSPRNSRFEVTVKVRFLKLGAFDVQNLITIPHAKLIRKLGELDSKQLSLVEDTLLFWLEFKEMDSKEENT
>NC_019780.1|WP_041235512.1|2994021_2994213_-|hypothetical-protein
MTALAQYILQNFDQLPNKEQQKVALEILKRIVHSDFPPLEDQDLVLSAEEIFLSLDQQESDYE
>NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRCVFHPEALSEYAEAVQYYTEQKIEVAQSFINAIEDTVYRIRDSPTRYVAIDEDVRRCMARKFPYGVLYTIEQDYILILAVMHCSREPGYWKSRK
>NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein
MRSIEQLTEEILSLPSESRALLADKLVESLEFDTDSVIQAVWVTEAKRRQDEVRDGSVQPIPGEDALAQVRRLIEP
>NC_019780.1|WP_156800811.1|2995295_2995460_+|hypothetical-protein
MKQRSRLPLPDRVLISQRIDLSSDSPPKTLRDRARKFALSALSKTDKLLADDQF
>NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYQIEFSRRAEKNLKRLSRQDQKRISDKIDTLAQEPRPSGVEKLQGRGEDAYRIRVGMYRVLYEIRDRELVILGVAEKVHWLVK
>NC_019780.1|WP_015230442.1|2995964_2996189_-|hypothetical-protein
MEISLTAKAEERLHKIVEHQGQSPSEVIEHALLLLEDYQRWEDEQDVADMEAVKQEIQEEGTIPWETVKANLGR
>NC_019780.1|WP_051017379.1|2996600_2997131_-|hypothetical-protein
MLNILVDKYIHEFGNCYEIEDQWWGDKDLNWEQAIERAWKSRFANGKMHGHQCRVAHNSANGLEKTLVNKLQPKELNDFQTLYDWIKSVVGCINGLGRTTAYDVARRLGAWLGLKPSCVYLHAGAAMGAKKLGIRGEVVPLSVFPKEIQSLGTMHAENFLCIYKHQIPDNITVGED
>NC_019780.1|WP_156800897.1|2997259_2997340_-|hypothetical-protein
MCPKCGADLKCVNVSEVNLSNADLDG
>NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein
MGNKFDKIKELKQMLDEGSITQEEFSQMKADLLSENSNTEDSKASRSFQLDKGKERKGVGWPEVLSVLFGIYGGLGYLFTKQPTAKKLVILVLSFLATGVYASLEIAITNTQESQMQESGDSQRTTAGSQESEAKEEQTIREQKIQQEEQELRKKQELSDKFNAERQKILNSANKMMDQGQYEEVIKLADKYAFVNDENLNNLKSQAKDKLAAIEKEYAALVAQLPSFIPELVQEKGESIKSKSWFDREFMIYNCDEVAPAQIEETVETKSNHDNGQPSRWTGSVPTASQVASEAESSYRFALRCGYAALLLEDKEYLKKAISLINKAEKYSTNNTLFIAKVKSGEL

Crispr_ID: NC_019780_42

• CRISPR_ID: NC_019780_42
• CRISPR_location: 2995126-2995213
• CRISPR_type: TypeV
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_42

Consensus_repeat	Method
GCGATCGCGCTTTCCCCTACCCGATCGCG	CRISPRCasFinder

spacers of NC_019780_42

>42.1|2995155|30|NC_019780|CRISPRCasFinder
TTCTCATTACTCAGAGAATTGAATAAAACA

CRISPR arrays and Neighbor proteins around NC_019780_42

CRISPR arrays

The CRISPR arrays of NC_019780_42

>merge|NC_019780|42|2995126-2995213|CRISPRCasFinder
GCGATCGCGCTTTCCCCTACCCGATCGCGTTCTCATTACTCAGAGAATTGAATAAAACAGCGATCGCGCCTTCCCCTACCCGATCGCG

>NC_019780|42|40|2995126-2995213|CRISPRCasFinder
GCGATCGCGCTTTCCCCTACCCGATCGCG	TTCTCATTACTCAGAGAATTGAATAAAACA
GCGATCGCGCCTTCCCCTACCCGATCGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl|CDD|367091
NC_019780.1|WP_041235512.1|2994021_2994213_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein	unknown	unknown	gnl|CDD|378247
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	unknown	unknown	gnl|CDD|312506
NC_019780.1|WP_156800897.1|2997259_2997340_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230445.1|2998532_2998817_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|368240
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_015230447.1|2998991_2999465_-|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350254
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	unknown	unknown	gnl|CDD|377942
NC_019780.1|WP_051017379.1|2996600_2997131_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800811.1|2995295_2995460_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230449.1|3000227_3000470_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|224937
NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein	unknown	unknown	gnl|CDD|378276
NC_019780.1|WP_015230448.1|2999775_3000225_-|HNH-endonuclease	unknown	unknown	gnl|CDD|366837
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514
NC_019780.1|WP_015230442.1|2995964_2996189_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800810.1|2993450_2993654_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl|CDD|224514

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	2.27787e-12
NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein	gnl|CDD|312506	pfam08972, DUF1902, Domain of unknown function (DUF1902). Members of this family of prokaryotic proteins adopt a fold consisting of one alpha-helix and four beta-strands. Their function has not, as yet, been elucidated.	4.7595e-17
NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|368240	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE. ParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralized by the antitoxin ParD. The family also encompasses RelE/ParE described in.	2.82061e-05
NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	4.55194e-05
NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	1.92203e-13
NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family	gnl|CDD|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.93951e-13
NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein	gnl|CDD|378247	pfam09720, Unstab_antitox, Putative addiction module component. This entry defines several short bacterial proteins, typically about 75 amino acids long, which are always found as part of a pair (at least) of small genes. The other protein in the pair always belongs to a family of plasmid stabilisation proteins (IPR007712). It is likely that this protein and its partner comprise some form of addiction module - a pair of genes consisting of a stable toxin and an unstable antitoxin which mediate programmed cell death - although these gene-pairs are usually found on the bacterial main chromosome.	1.42539e-10
NC_019780.1|WP_015230447.1|2998991_2999465_-|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350254	cd18687, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains into distinct groups; this subgroup includes some sequences belonging to one of these, PIN_3.	3.39712e-64
NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein	gnl|CDD|378276	pfam09851, SHOCT, Short C-terminal domain.	0.000163974
NC_019780.1|WP_015230448.1|2999775_3000225_-|HNH-endonuclease	gnl|CDD|366837	pfam01844, HNH, HNH endonuclease. His-Asn-His (HNH) proteins are a very common family of small nucleic acid-binding proteins that are generally associated with endonuclease activity.	3.07969e-11
NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	6.04494e-16
NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl|CDD|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	0.000343328

Protein sequences

>NC_019780.1|WP_015230440.1|2994776_2995007_-|addiction-module-protein
MRSIEQLTEEILSLPSESRALLADKLVESLEFDTDSVIQAVWVTEAKRRQDEVRDGSVQPIPGEDALAQVRRLIEP
>NC_019780.1|WP_015230439.1|2994489_2994780_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRCVFHPEALSEYAEAVQYYTEQKIEVAQSFINAIEDTVYRIRDSPTRYVAIDEDVRRCMARKFPYGVLYTIEQDYILILAVMHCSREPGYWKSRK
>NC_019780.1|WP_041235512.1|2994021_2994213_-|hypothetical-protein
MTALAQYILQNFDQLPNKEQQKVALEILKRIVHSDFPPLEDQDLVLSAEEIFLSLDQQESDYE
>NC_019780.1|WP_015230437.1|2993684_2994029_-|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSSPARGEVWLVDLGYVAKVRPCLVISIPALMEDRALATLVPHTTSPRNSRFEVTVKVRFLKLGAFDVQNLITIPHAKLIRKLGELDSKQLSLVEDTLLFWLEFKEMDSKEENT
>NC_019780.1|WP_156800810.1|2993450_2993654_+|hypothetical-protein
MFSFCRVGKGIICQEANHLKLLRAIAPPPHPIALLSVRELNQTAMPLARSPTYAPPPTRSRSYQPEN
>NC_019780.1|WP_015230436.1|2993147_2993354_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MNYKIEIEQEEDGRYIAEIVELPGVLVYGNSQEEAILKVQALALRVLADQLEESELVENNLSLSFVTI
>NC_019780.1|WP_015230435.1|2992938_2993151_-|addiction-module-toxin,-HicA-family
MSKWSSTKAKRVLKALKKIGWKLKRQTGSHKILERSGWNDVVFAFHDGEEIGPKMLARIAKLTGLTPDDL
>NC_019780.1|WP_015230434.1|2992478_2992724_-|DUF1902-domain-containing-protein
MSQLKYEVSAFWDKKAQVWVAESESVPGLATEAETLEALTQKLRTLVPELLQLNRIIEDTSAREIEIEITSHRQETIQLAT
>NC_019780.1|WP_015230433.1|2992280_2992478_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MPKSFTPELKKRLKEAGCYFERSGKGDHEIWYSPITKCHFVVDQSIKSRHTANGVLKQAGLPKAF
>NC_019780.1|WP_015230432.1|2991915_2992122_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKFNVTLDRDEDGIWIVECPSIPGCVSQGNTKEEALENIQDAIAACLQVRAERGFPLTIETQQVEVIA
>NC_019780.1|WP_156800811.1|2995295_2995460_+|hypothetical-protein
MKQRSRLPLPDRVLISQRIDLSSDSPPKTLRDRARKFALSALSKTDKLLADDQF
>NC_019780.1|WP_015230441.1|2995710_2995968_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSYQIEFSRRAEKNLKRLSRQDQKRISDKIDTLAQEPRPSGVEKLQGRGEDAYRIRVGMYRVLYEIRDRELVILGVAEKVHWLVK
>NC_019780.1|WP_015230442.1|2995964_2996189_-|hypothetical-protein
MEISLTAKAEERLHKIVEHQGQSPSEVIEHALLLLEDYQRWEDEQDVADMEAVKQEIQEEGTIPWETVKANLGR
>NC_019780.1|WP_051017379.1|2996600_2997131_-|hypothetical-protein
MLNILVDKYIHEFGNCYEIEDQWWGDKDLNWEQAIERAWKSRFANGKMHGHQCRVAHNSANGLEKTLVNKLQPKELNDFQTLYDWIKSVVGCINGLGRTTAYDVARRLGAWLGLKPSCVYLHAGAAMGAKKLGIRGEVVPLSVFPKEIQSLGTMHAENFLCIYKHQIPDNITVGED
>NC_019780.1|WP_156800897.1|2997259_2997340_-|hypothetical-protein
MCPKCGADLKCVNVSEVNLSNADLDG
>NC_019780.1|WP_015230444.1|2997435_2998479_-|SHOCT-domain-containing-protein
MGNKFDKIKELKQMLDEGSITQEEFSQMKADLLSENSNTEDSKASRSFQLDKGKERKGVGWPEVLSVLFGIYGGLGYLFTKQPTAKKLVILVLSFLATGVYASLEIAITNTQESQMQESGDSQRTTAGSQESEAKEEQTIREQKIQQEEQELRKKQELSDKFNAERQKILNSANKMMDQGQYEEVIKLADKYAFVNDENLNNLKSQAKDKLAAIEKEYAALVAQLPSFIPELVQEKGESIKSKSWFDREFMIYNCDEVAPAQIEETVETKSNHDNGQPSRWTGSVPTASQVASEAESSYRFALRCGYAALLLEDKEYLKKAISLINKAEKYSTNNTLFIAKVKSGEL
>NC_019780.1|WP_015230445.1|2998532_2998817_-|hypothetical-protein
MKIETLKKRLNKNRSMTTITMRLPEDVVEDLKRVAPLLGFSGYQPLARAYIGQGLRADLERLENDTVSALVETLKHHGVSDEVLQEALSEVIYD
>NC_019780.1|WP_015230447.1|2998991_2999465_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MSETVYIETSILGYLTTRPSRNLILVANAEITREWWETRRSFFDLYISQAVINEVAKGDAEIASRRLEMVNGIPLLEINQSVLDLAEQFLERSNLPAKADVDALHIAVATIHRMDYLLTWNCKHIANAQIQKKLAEISFYFSYELPIICTPNELLGG
>NC_019780.1|WP_015230448.1|2999775_3000225_-|HNH-endonuclease
MAITKDIRQQVRERAKYLCEYCHSSEEASAARFEIDHIQPRSCGGADTFENLALACQRCNSYRYNFTEGTDPEYKVSTQLFNPRLHQWNEHFVWEKGGLVIRGKTSIGRATCDRLDLNDQRHNDGAIVKARRLWIQGGWHPPSNDAIES
>NC_019780.1|WP_015230449.1|3000227_3000470_-|hypothetical-protein
MNAQLMIQPSSFIDAGIQIKPVRGLFLFKLSEDLQERLESLNEKQRESQLSSDETVELAGILELDRIFTLLNAKIIAESE

Crispr_ID: NC_019780_43

• CRISPR_ID: NC_019780_43
• CRISPR_location: 3126760-3126835
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_43

Consensus_repeat	Method
GAGTAACGAAACCCAACATCACTC	CRISPRCasFinder

spacers of NC_019780_43

>43.1|3126784|28|NC_019780|CRISPRCasFinder
AAAAGTCGATCAAAGTAGGTTGGGTGTA

CRISPR arrays and Neighbor proteins around NC_019780_43

CRISPR arrays

The CRISPR arrays of NC_019780_43

>merge|NC_019780|43|3126760-3126835|CRISPRCasFinder
GAGTAACGAAACCCAACATCACTCAAAAGTCGATCAAAGTAGGTTGGGTGTAGAGTAGCGAAACCCAACATCACTC

>NC_019780|43|41|3126760-3126835|CRISPRCasFinder
GAGTAACGAAACCCAACATCACTC	AAAAGTCGATCAAAGTAGGTTGGGTGTA
GAGTAGCGAAACCCAACATCACTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230561.1|3126863_3127400_+|TM2-domain-containing-protein	unknown	unknown	gnl|CDD|377473
NC_019780.1|WP_015230567.1|3132033_3132744_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|273244
NC_019780.1|WP_015230553.1|3115981_3117004_-|DUF3179-domain-containing-protein	unknown	unknown	gnl|CDD|371498
NC_019780.1|WP_015230558.1|3123910_3124324_+|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl|CDD|143581
NC_019780.1|WP_015230563.1|3127812_3128898_+|dipeptide-epimerase	unknown	unknown	gnl|CDD|239435
NC_019780.1|WP_015230556.1|3121410_3122475_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230568.1|3133239_3134211_+|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	unknown	unknown	gnl|CDD|273084
NC_019780.1|WP_015230564.1|3128854_3129916_+|DUF1611-domain-containing-protein	unknown	unknown	gnl|CDD|225902
NC_019780.1|WP_041235930.1|3118148_3121127_+|UPF0182-family-protein	unknown	unknown	gnl|CDD|235047
NC_019780.1|WP_015230550.1|3112920_3113256_+|XisI-protein	unknown	unknown	gnl|CDD|341357
NC_019780.1|WP_156800901.1|3135326_3135899_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_041235525.1|3122550_3123897_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase	unknown	unknown	gnl|CDD|237856
NC_019780.1|WP_015230560.1|3126126_3126600_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_015230551.1|3113359_3113896_-|peroxiredoxin	unknown	unknown	gnl|CDD|239315
NC_019780.1|WP_015230562.1|3127516_3127723_-|hypothetical-protein	unknown	unknown	gnl|CDD|177653
NC_019780.1|WP_015230569.1|3134282_3135251_+|quinolinate-synthase-NadA	unknown	unknown	gnl|CDD|236489
NC_019780.1|WP_015230559.1|3124356_3125682_+|four-carbon-acid-sugar-kinase-family-protein	unknown	unknown	gnl|CDD|225930
NC_019780.1|WP_015230552.1|3113929_3115441_-|glycerol-kinase-GlpK	unknown	unknown	gnl|CDD|198361
NC_019780.1|WP_015230565.1|3129938_3130385_-|DUF29-domain-containing-protein	unknown	unknown	gnl|CDD|366774
NC_019780.1|WP_015230566.1|3130419_3131334_-|rhodanese-related-sulfurtransferase	unknown	unknown	gnl|CDD|223982

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230561.1|3126863_3127400_+|TM2-domain-containing-protein	gnl|CDD|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	3.90324e-14
NC_019780.1|WP_015230567.1|3132033_3132744_-|methyltransferase-domain-containing-protein	gnl|CDD|273244	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase. This tRNA methyltransferase is involved, together with cmoB, in preparing the uridine-5-oxyacetic acid (cmo5U) at position 34. [Unknown function, Enzymes of unknown specificity].	2.71007e-31
NC_019780.1|WP_015230553.1|3115981_3117004_-|DUF3179-domain-containing-protein	gnl|CDD|371498	pfam11376, DUF3179, Protein of unknown function (DUF3179). This family of proteins has no known function.	3.5007e-109
NC_019780.1|WP_015230558.1|3123910_3124324_+|TerB-family-tellurite-resistance-protein	gnl|CDD|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	4.07865e-10
NC_019780.1|WP_015230563.1|3127812_3128898_+|dipeptide-epimerase	gnl|CDD|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	2.99194e-100
NC_019780.1|WP_015230568.1|3133239_3134211_+|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	gnl|CDD|273084	TIGR00452, methyltransferase_putative, tRNA (mo5U34)-methyltransferase. This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity].	0
NC_019780.1|WP_015230564.1|3128854_3129916_+|DUF1611-domain-containing-protein	gnl|CDD|225902	COG3367, COG3367, Uncharacterized conserved protein [Function unknown].	1.43387e-97
NC_019780.1|WP_041235930.1|3118148_3121127_+|UPF0182-family-protein	gnl|CDD|235047	PRK02509, PRK02509, hypothetical protein; Provisional.	0
NC_019780.1|WP_015230550.1|3112920_3113256_+|XisI-protein	gnl|CDD|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	1.47249e-56
NC_019780.1|WP_156800901.1|3135326_3135899_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	8.2236e-29
NC_019780.1|WP_041235525.1|3122550_3123897_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase	gnl|CDD|237856	PRK14901, PRK14901, 16S rRNA methyltransferase B; Provisional.	0
NC_019780.1|WP_015230560.1|3126126_3126600_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	4.04406e-18
NC_019780.1|WP_015230551.1|3113359_3113896_-|peroxiredoxin	gnl|CDD|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	3.7386e-61
NC_019780.1|WP_015230562.1|3127516_3127723_-|hypothetical-protein	gnl|CDD|177653	PLN00014, PLN00014, light-harvesting-like protein 3; Provisional.	5.55818e-08
NC_019780.1|WP_015230569.1|3134282_3135251_+|quinolinate-synthase-NadA	gnl|CDD|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NC_019780.1|WP_015230559.1|3124356_3125682_+|four-carbon-acid-sugar-kinase-family-protein	gnl|CDD|225930	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown].	9.48434e-99
NC_019780.1|WP_015230552.1|3113929_3115441_-|glycerol-kinase-GlpK	gnl|CDD|198361	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup is composed of mostly bacterial and archaeal glycerol kinases (GK), including the well characterized proteins from Escherichia coli (EcGK), Thermococcus kodakaraensis (TkGK), and Enterococcus casseliflavus (EnGK). GKs contain two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The high affinity ATP binding site of EcGK is created only by a substrate-induced conformational change, which is initiated by protein-protein interactions through complex formation with enzyme IIAGlc (also known as IIIGlc), the glucose-specific phosphocarrier protein of the phosphotransferase system (PTS). EcGK exists in a dimer-tetramer equilibrium. IIAGlc binds to both EcGK dimer and tetramer, and inhibits the uptake and subsequent metabolism of glycerol and maltose. Another well-known allosteric regulator of EcGK is fructose 1,6-bisphosphate (FBP), which binds to the EcGK tetramer and plays an essential role in the stabilization of the inactive tetrameric form. EcGK requires Mg2+ for its enzymatic activity. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0
NC_019780.1|WP_015230565.1|3129938_3130385_-|DUF29-domain-containing-protein	gnl|CDD|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	7.29007e-58
NC_019780.1|WP_015230566.1|3130419_3131334_-|rhodanese-related-sulfurtransferase	gnl|CDD|223982	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only].	2.98052e-143

Protein sequences

>NC_019780.1|WP_015230560.1|3126126_3126600_+|Uma2-family-endonuclease
MKWQDVIEHPSLKDLPFKIELDENGKIIMSPTSNRHGRLQVKLSLLLAKYASDGELYLECSIDTRKGVKVADVAWSSPEFFAEYGEITPLPVAPEICIEIVSPSNSQREMMEKIDLYSAKGAQEVWLCDDDGHPTIHTPKGMIQRSNLITEFPSSIL
>NC_019780.1|WP_015230559.1|3124356_3125682_+|four-carbon-acid-sugar-kinase-family-protein
MTTSPKIIVLDDDPTGSQTVHSCLLLMQWDIETLRIGLQDEVSIFFILTNTRALSPEDATQRTREVCQNLKTALTTENITDFLVVSRSDSTLRGHYPLETDVIAAELGPFDAHFLTPAFFEGGRITRDSIHYIVSEAGETPVHQTEFAKDSVFGYSHSYLPDYVEEKTNGKIKANQVECLTLHDIRQGTKDRLLQLKNNQCVAVDGETQSDLDRFASDVLAATQEGKRFLFRSAASLLTSLAQLGKQPIPPEEMGKYDATPKPGVVLVGSHVKKSTAQLYALLEEATVTGIEVDVKRLRDFPETRDQQLTEILQSIKATHQNQQTPVIYTSREELQFKNTQERLNFGVKVSSFLMDIVRRLPSDISFLISKGGITSNDVLSDGLRLQSARLLGQILAGCSLVRSPETHPQFPNLPVVLFPGNVGDNQGLVTAYRRLNKHHN
>NC_019780.1|WP_015230558.1|3123910_3124324_+|TerB-family-tellurite-resistance-protein
MNNKPTNASKQLLKILIGAAWIDGKFQPEERQYLIKTAEKQQLADDPEIRPLLYELKTVKPEECYRWLEEYFGGYPTQEDYENLIEAISGLIYSDGEMASEEAKLLTEVQQYDPASTSSLDKVLKTVQKLYQRYVTS
>NC_019780.1|WP_041235525.1|3122550_3123897_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase
MKIMTNANPRQVVFNALYDVILKDAYTEVAIDRAFQSSHFLPQNYGFVKELVSGIVRRQRTLDALISQFAKKPQQPPKLRLILQIGLYQLRYLTQVPPSAAVDTSVELAKNNGLSKLSGVVNGILRQYIRQAETVADPLILPDDPIEKLGVKHSFPNWIIKLWRDEWGQETAEKLAAWFNQSPTIDLRINPLNVSKEAVEKAFMEANINYEFLSLPYGLRLTSRVGNIQQLPGFSEGWWTVQDFSAQLVSYLLNPQPGETIIDACAAPGGKTTHIAELMGDDGLIWALDRASSRLKKVISNAERLQHKSIKTCVADVREMKQFQQAANRVLVDAPCSGLGTLHRRTDLRWRQTPENLVELSQLQQEILTTAATWVKPKGTLVYATCTLNPLENEDVIQTFLSNHPQWEIDLPPDNFPSKSLVSASGGIKLIPTEHNSDGFFMVKLKHR
>NC_019780.1|WP_015230556.1|3121410_3122475_+|hypothetical-protein
MLNRKISSTLVLFTATSSILGWNLGNAAFAQNRECQQEIVMQKVEVLDGQGGGEGKLEMQIQVESGSLNEEVKVWKLPPNQSQRLQEKIGSFPIPEGSSVQQRLRTSIVEREVGSDWLVGADDHGDDESTLTLRCGEPQEITHNVIIQGKNDAKVRVTYDIQDTTRGTVQQPLIPMNQTINLLKLSSEARWQSGRLVSANNVTNTEQLSWMGSPSNDNGFVRLEEVTLENGKTTNALRTHPKWVSNGTIKGWHPEVELPEKAVFSADVGFVEGAQNTDGVTFQVWEHHQEGGRRVWNKVAEVEKDYTGNLRQIEADLSHLAGKEVKIELRVDAGESSGQDWAAWSDVKINSASN
>NC_019780.1|WP_041235930.1|3118148_3121127_+|UPF0182-family-protein
MSAKNWLKLLPLLIILIPFGEIITRLLVEWFWFQEVNYQGVWLKRLITQLGLGGGVFLISALFLGINFNLAQKLQFTDSEEDSPSKLVLGKMNLRSLLIVIGLICLLISLMLIHYLQVSVYLIESGFNLPLLENIVDISGLSENYEVNNLNPFLSSPFKLQLVKPLLERVMTSQWQILLILAIFAILLMRISFWLKSFAVIINVFFTVTIALNWTKVLPFLYRTNFELFDPLFNKDIGFYIFSLPIWELLDFWLGGLFLYSLLAVSLMYLCSGNSISDGKFPGFSYPQLRHLYTLGGMVFLTLSLRHGLARYELLYSERGAIYGASYTDVQVQLPIETLLSIVAAVTAVWLFWHALTHSMRFRIKGRSHWLGFILYIGAVILGITLSPIAQRFEVLPNELEREQPYIERSIQLTRAAFGLDQIEEQRFDPEDTLTREEVEANQQTISNIRLWDARPLLQTNRQLQQIRLYYEFADADIDRYTLRVNIDDPENVSKRTERQQMIIAPRELDFNSVPKQAQTWVNKHLVYTHGYGFTLSPVNQVGEGGLPKYFIKDIGTGQEEAAGDLRTKSPQIRDSIPIGKPRIYYGELTDNYVMIQTKQPELDFPTGEDNAYNTYDGKGGIPIGSWWRRSIFAQYLKDWQMLFTQNFTPETKLLMRRDIKERVKAIAPFLQFDSDPYLVTADTEDTALGPPENSLHWVIDAYTISDRYPYSDPGSYRFNYIRNSVKVVVDAYDGDVQFYIADLNDPIIQSWEKVFPNLFQPLWQMPITLKAHIRYPVDLFKVQSERLLTYHMIDPQVFYNREDQWQIPQEIYANEARSVEPYYLTMKLPTEQREEFILLLPFTPTERNNLTAWLAGRSDGQFYGKQLLYQFPKQRLIFGPEQIEALINQDPVISQQISLWNQQGSRAIQGNLLVIPIEQSLLYVEPVYLEAERNSLPTLIRVIVVYENRIVMAKTLQGAIDAIFLPEDSDTPAIIRPVEEVTPSLEIETQE
>NC_019780.1|WP_015230553.1|3115981_3117004_-|DUF3179-domain-containing-protein
MKPIAKITLGTISLLTLSLGGMVVQAGGWDNFKLQYFHLTSVFHDQSQELEDIKKQNNKPKDTARIDLNNLFNGGPPKDGIPSIDDPKFDTAETTPFDKDETVIGVVINGEAKAYPYKIMNWHEIVNDTIGGINVSVTYCPLCDTIATFTRGNTTFGVSGKLYQSCLVMYDRADDTLYAQPWTLGIVGSRVNQSLERLPSVKTSLGDWLEKHPDSEILSTETGYDRNYQRYPYGSYYTDDRIIFSVRNQDQRELHPKAIVSYIWESGNGTPKGEFSGASQQFPHQEMKQVGEKTVQFNGRKIQARWDEELETVIVEEMDETRIPSSPAFAFVYPAFFGES
>NC_019780.1|WP_015230552.1|3113929_3115441_-|glycerol-kinase-GlpK
METKQKYVLALDLGTTGNRAIIFDRNGEVVGQSYGELTQYYPQPGWLEHDPMEIWHDTRSCMEQVLRSTDVAPSEIAATGLTVQRETCLLWDKTTGKPLHRAIVWQDRRTAHYCLELTKKGYAEKIQNSTGLVLDAYFSASKLSWLLDWVKQNQPEMNLDHVLAGTIDTWILWNLTGRRVHSTDHSNASRTMLMNLATQQWDAELLDLFGIPVHLMPEIRPSLGDFGAIDAEILGTEIPVRSVFGDQQAALYAHGCNQKGMLKCTYGTGCFLISQSGQELTRSKHQLLSTVAWSEANGGQPVTNYALEGAMFTTGACIQWLRDGMKLIKSAPETETLARQVKDTDGVYFVPALSGLGAPHWDMNARGAFLGITGGVQREHMVRAVLESIAYQVKEVVDAMNKDSDTPISLLKVDGGASQNNFLMEFQADVLGIPVERPAILDATAQGAAFGAGLAVGFWNDYDELVAKRKRDRSFIPSKNQQQAQDQFSIWQKAVGRAKNWMD
>NC_019780.1|WP_015230551.1|3113359_3113896_-|peroxiredoxin
MFRRHFLTLSLTLCLALFCLIPNAEALGGKQPSLNEPAPEFTLPTNTGDGKISLSDYQGKWVVLYFYPEDFTSGCTLEAKRFQQDLSKYQARNAQIIGVSADDVQSHEAFCDATGVEFPLLADTDGSVSKAYGSWLGIRSLRHTYLIDPDGMLREIFLGVKPPIHSRQVLARLDELQQ
>NC_019780.1|WP_015230550.1|3112920_3113256_+|XisI-protein
MDKLTHYRKLIREILSNHGKIPYPQGNIKFETVFDPESDRYLLMILGHENKRYEHGCLIHVDIINDKIWIQRDGTEIGVANELVEAGIPKEEIVLGFKSPQRRKDTEFAIS
>NC_019780.1|WP_015230561.1|3126863_3127400_+|TM2-domain-containing-protein
MSGKIVPHQRSYPTAYALWCFCFLSVCGVHRIYARRYFSGFFYLITFGFFGIGQFIDLFMIPGMIDEENLKIKALYGYQPDQGSFYQTPESIVINLKRNDPPQVNGEKTAEKPLKGKDIDRAILQTCRKSNGATLAEIFLEVDEDYEKLETRVQDLMKKNLLYIDNRADDGAVIYKIN
>NC_019780.1|WP_015230562.1|3127516_3127723_-|hypothetical-protein
MTTGKGSIVDDQGKMNNFAVEPDVYVQEESRAGFTPYAELLNGRLAMIGFVSLLILEVATGHGLFGQF
>NC_019780.1|WP_015230563.1|3127812_3128898_+|dipeptide-epimerase
MEITVIKLPVQKRFPLTISRGTTAKTTNLWIKLEQEGIEGWGEAVPFSIGGESKQDTELLQKQVREIIPILKCFKPTARSSIQAKLKEAKVSSAICSAIDVACYDWLGKRAGLPLWEILGLDINQTVPISVTVGISSPEEGKKRLENWQTVTTGNRIKVKLGNPDGLEADQKLFQTLYQNSPNSEFTIDANGGWTLDQAITMSHWLADYNVAYLEQPLSVREDEKLPTLAKHSPLPIFADESCFTSEDIPRLMALNVDGINIKLMKAGSLTEVLRMAYTAQSCGLKVMYGCYSDSSLGNTAMAHLGSLADYLDLDSHLNLKDDPFCGAVLNNGYLQPNSSPGLGVTYNAANGGTSGGDFTL
>NC_019780.1|WP_015230564.1|3128854_3129916_+|DUF1611-domain-containing-protein
MQLTAEHRVAILLYDGIRGEQGKTGLAFLRYSEANIVAVIDQDCAGDSLFRLRRIDRDVPIVADVTTALTYHPNVLLIGIAPSGGQLPPAWKEEVKQAVKAGLSVVNGLHTPIRSLFEEELVLQSGQWLWDVREEPTGLGISGGRARFLSAKRILTVGTDFSIGKMSTSLELVTIAKQKGYRAKFLATGQGGMMISGGGIPLDAIRVDFAAGAVEKMVLEAGETGEDFLFVEGQGSLFHPGSTAVLPLLRGTQPTDLILVHRAGQREIRNFPEIKIPPLSEVVKLYEMLASGVGAFGEIKVKGIALNTFHLEKETAKQEIAKVSEMTGLPCNDVVRFSGENLFSALVSASEKQ
>NC_019780.1|WP_015230565.1|3129938_3130385_-|DUF29-domain-containing-protein
MQLQSSLYEKDFYLWIEQTVTSLQKKQFQDLDLDNLITELESMGKREKRELISRLFILIEHLLKLQYWETEKEDNARGWKNTVIEQRKQIEILFRESPSLKQFLPELLSTTYQDAREVFLRKSELSETTVPVESPFTLKTILDPNYFP
>NC_019780.1|WP_015230566.1|3130419_3131334_-|rhodanese-related-sulfurtransferase
MKVATFYKFIQLDNLETWRDRCLKFCEQEGIKGTILLATEGINCTLSGEAESIDNFLQFLQQDDRFLDIEPKISDIDQPPFHRLKVKIKSEIVTMGVNEIKPAISTGKHIDPETWNQIISDPEVLVIDTRNQYEYKVGTFQNAVSPQTDNFRQFPEFVAENLDPNKHKKIAMFCTGGIRCEKASAYLIAQGFEEVYQLNGGILNYLETVSSDKSLWKGECFVFDHRVAVNEELEKGNYELCYGCGQPLSPEERQSEKYEAGVSCPYCYDHLTQQQRDRFWERRRQQELAKQRNQKHIGAEISTN
>NC_019780.1|WP_015230567.1|3132033_3132744_-|methyltransferase-domain-containing-protein
MENVGDRIEAENANWSFSGEISEHFDQHIQKSIPFYETSHQLGVNLSDFFLGDGSICYDLGCSTGRLLTRLATHHQNKRVQFIGIDIEAEMVNHAQNWCQDYSNVEVRCESLIDLELEKADLIFAYYTMQFIKPKYRQLLFDRIYDALNWGGGFLLFEKVRSPDARFQDMMTTLYTDYKLDQGYSGDEIIAKNRSLKGILEPFSTAGNLGLLQRAGFVDITTVMKYICFEGFLAIK
>NC_019780.1|WP_015230568.1|3133239_3134211_+|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB
MFNYQPLYDQLANSPAAKWLETLPQDVETALQPNRNGHFLAWKETVESLPPLPPSLIDLQQGVIKIGSPDDTDEITRQRLEVGLKKLCPWRKGPIELFGVYINTEWRSDWKWQRLENHITPLKGRTVLDVGCGNGYYILRMLGNGAELVIGIDPSVLYVMQYQAIKQYFPTTRGYAIPLGVQHLPEKLHAFDTVFSMGILYHQRSPRDHLKTLRDTLKPGGELVLETIVIPEDYTDVLIPEKRYAKMRNVWSIPNCSTLESWLSQCGFKNIRLVDVTITSTAEQRRTEWINSHSLENFLDPNDSSKTIEGYPAPRRGIFIANS
>NC_019780.1|WP_015230569.1|3134282_3135251_+|quinolinate-synthase-NadA
MFTTAFAKSKPTTHQLPTDLFTAIENLKQELNAVVLAHYYQEGDIQDVADYIGDSLGLSQKAANTDADVIVFAGVHFMAETAKILNPNKLVLIPDLDAGCSLAEGCPPEEFSRFKERYPDHLVVSYINCTAEIKAMSDIICTSSNAVKIINQTPEEQPIIFAPDRNLGRYVMKETGRDLVLWEGSCIVHETFSEKAIVQLKTTHPEAEIIAHPECEEPVLRHANYIGSTTRLLKYSQDSSQKEFIVATEPGIIHQMQKATPEKTFIPAPAMNNCACNECPYMRLNTLEKLYLAMKNRSPEVTLPEEIRQAALKPIQKMLAMS
>NC_019780.1|WP_156800901.1|3135326_3135899_+|Uma2-family-endonuclease
MMITQTRFLTLEEFLKLPETKPPSEYINGQIIPKPVPKTRHSRLQGKLIHKINEVVEAKQIGYGFPELRCTFGERSIIPDIAVFRWENIAIDETGEPLDQVIIPPNWTIEILSPDQSSNRVIGNILHCLQYGSELGWLIDPDDRSILVFQRQQQPELFQGNDQLVVLEGIDLDLTAEEVFNWLKMGTFPT

Crispr_ID: NC_019780_44

• CRISPR_ID: NC_019780_44
• CRISPR_location: 3174636-3174745
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_44

Consensus_repeat	Method
TAGCTGTAGGTTGGGTGAAACCCAACA	CRISPRCasFinder

spacers of NC_019780_44

>44.1|3174663|56|NC_019780|CRISPRCasFinder
TGAAATCAAGTAGCTGTAGGTTGAGTAAAACCCAACATGGCATCAAGTAGCTGTAG

CRISPR arrays and Neighbor proteins around NC_019780_44

CRISPR arrays

The CRISPR arrays of NC_019780_44

>merge|NC_019780|44|3174636-3174745|CRISPRCasFinder
TAGCTGTAGGTTGGGTGAAACCCAACATGAAATCAAGTAGCTGTAGGTTGAGTAAAACCCAACATGGCATCAAGTAGCTGTAGTAGCTGTAGGTTGGGTGAAACCCAACA

>NC_019780|44|42|3174636-3174745|CRISPRCasFinder
TAGCTGTAGGTTGGGTGAAACCCAACA	TGAAATCAAGTAGCTGTAGGTTGAGTAAAACCCAACATGGCATCAAGTAGCTGTAG
TAGCTGTAGGTTGGGTGAAACCCAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235531.1|3174773_3175112_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230610.1|3177574_3178390_-|uroporphyrinogen-III-synthase	unknown	unknown	gnl|CDD|119440
NC_019780.1|WP_041235529.1|3161718_3162222_-|DUF4149-domain-containing-protein	unknown	unknown	unknown
NC_019780.1|WP_015230615.1|3191028_3191727_+|type-II-secretion-system-protein	unknown	unknown	gnl|CDD|225076
NC_019780.1|WP_015230598.1|3163256_3164090_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl|CDD|180958
NC_019780.1|WP_015230613.1|3183367_3186073_+|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|223972
NC_019780.1|WP_015230596.1|3161135_3161414_+|TMEM165/GDT1-family-protein	unknown	unknown	gnl|CDD|225030
NC_019780.1|WP_015230599.1|3164307_3165891_+|NAD(P)H-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl|CDD|235044
NC_019780.1|WP_015230606.1|3172412_3174314_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015230603.1|3170584_3170899_-|DUF962-domain-containing-protein	unknown	unknown	gnl|CDD|377609
NC_019780.1|WP_015230616.1|3191785_3192793_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl|CDD|227132
NC_019780.1|WP_015230601.1|3168416_3168995_+|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NC_019780.1|WP_015230602.1|3169153_3170545_-|amidohydrolase-family-protein	unknown	unknown	gnl|CDD|368185
NC_019780.1|WP_015230611.1|3178482_3181314_-|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl|CDD|234734
NC_019780.1|WP_015230600.1|3165996_3168201_+|alpha-amylase/alpha-mannosidase	unknown	unknown	gnl|CDD|224366
NC_019780.1|WP_015230612.1|3181544_3183053_+|polyamine-aminopropyltransferase	unknown	unknown	gnl|CDD|235139
NC_019780.1|WP_015230614.1|3186372_3191013_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_083874501.1|3171010_3171490_-|fatty-acid-hydroxylase	unknown	unknown	gnl|CDD|225546
NC_019780.1|WP_015230609.1|3176398_3176992_-|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|184807
NC_019780.1|WP_015230608.1|3175292_3176237_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|215135

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015230606.1|3172412_3174314_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	2.6e-47	155.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230615.1|3191028_3191727_+|type-II-secretion-system-protein	gnl|CDD|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	0.00133888
NC_019780.1|WP_015230610.1|3177574_3178390_-|uroporphyrinogen-III-synthase	gnl|CDD|119440	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.	1.54496e-62
NC_019780.1|WP_015230598.1|3163256_3164090_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl|CDD|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NC_019780.1|WP_015230613.1|3183367_3186073_+|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase	gnl|CDD|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0
NC_019780.1|WP_015230609.1|3176398_3176992_-|dephospho-CoA-kinase	gnl|CDD|184807	PRK14730, coaE, dephospho-CoA kinase; Provisional.	1.68625e-99
NC_019780.1|WP_015230599.1|3164307_3165891_+|NAD(P)H-quinone-oxidoreductase-subunit-N	gnl|CDD|235044	PRK02504, PRK02504, NAD(P)H-quinone oxidoreductase subunit N.	0
NC_019780.1|WP_015230606.1|3172412_3174314_+|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	1.98573e-121
NC_019780.1|WP_015230603.1|3170584_3170899_-|DUF962-domain-containing-protein	gnl|CDD|377609	pfam06127, DUF962, Protein of unknown function (DUF962). This family consists of several eukaryotic and prokaryotic proteins of unknown function. The yeast protein YGL010W has been found to be non-essential for cell growth.	2.01131e-09
NC_019780.1|WP_015230616.1|3191785_3192793_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl|CDD|227132	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion].	4.21795e-09
NC_019780.1|WP_015230601.1|3168416_3168995_+|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	2.25203e-42
NC_019780.1|WP_015230602.1|3169153_3170545_-|amidohydrolase-family-protein	gnl|CDD|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	1.35975e-10
NC_019780.1|WP_015230611.1|3178482_3181314_-|excinuclease-ABC-subunit-UvrA	gnl|CDD|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NC_019780.1|WP_015230600.1|3165996_3168201_+|alpha-amylase/alpha-mannosidase	gnl|CDD|224366	COG1449, COG1449, Alpha-amylase/alpha-mannosidase [Carbohydrate transport and metabolism].	6.6471e-148
NC_019780.1|WP_015230612.1|3181544_3183053_+|polyamine-aminopropyltransferase	gnl|CDD|235139	PRK03612, PRK03612, polyamine aminopropyltransferase.	0
NC_019780.1|WP_083874501.1|3171010_3171490_-|fatty-acid-hydroxylase	gnl|CDD|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	6.1345e-08
NC_019780.1|WP_015230596.1|3161135_3161414_+|TMEM165/GDT1-family-protein	gnl|CDD|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	2.36249e-18
NC_019780.1|WP_015230608.1|3175292_3176237_-|methyltransferase-domain-containing-protein	gnl|CDD|215135	PLN02244, PLN02244, tocopherol O-methyltransferase.	9.88778e-61

Protein sequences

>NC_019780.1|WP_015230606.1|3172412_3174314_+|group-II-intron-reverse-transcriptase/maturase
MSQIRYKCDARTKTFLMLWLGFGFNLMAETEWNQIDWKEVEIRVFKLQKRIYRASQSGDVARVHKLQKLLLRSWCAKLLAVRRISQDNQGKNTAGIDGVKSLSPKQRLSLAESLTLTGKGESLRRVWIPKPGRKEKRGLGIPVMEDRARQALLKLALEPEWEAKFEPNSYGFRPGRSCHDAGEAIYKAINLKPKWVLDADISKCFDRINHNVLLQKLNTTPIMARQIRAWLKSGVLDRGDWMPTNEGTPQGGVISPLLANIALHGLEEYIKQWTETWKGRKEKNRKSISLIRYADDFVVLHKDKSIIQQAKMLIEQWLHGLGLEISESKTRVCHTLHETDETKAGFDFLGWNIRQYKVGKHHSGKTAHKEILGFKTIIKPSDKNIKTHYEKIVEALDSMRGKSQEVIIDKLNPIIRGWCSYHKTVCSKETFQHIDHLVYNKLNRWIKRRHPNKTPKWCKERYFHLTKEKDLAKEDRKDKWVFSTPSDVPNSPVAGTHELWKHAWTPIERHIKIEGTRSPFDGDWRYWSKRRGEYPGISKRVATLMKRQEGKCTRCGLYVKDEDVVEVDHIVPKAEGGKDHYKNLQLLHRHCHHQKTAEDRQRQMDNKGQKEAQKKTKKGRKSETKQRSSVRTA
>NC_019780.1|WP_083874501.1|3171010_3171490_-|fatty-acid-hydroxylase
MILIISFVSAFVVASLVEYWIHRLMHASQKLGERHRDHHRRNEGQGVLWEFLDYVKGSAIVMLLPFLISWEVGMGWLLGALSYSIFSAYAHQLQHDNPTKCFWMKMPVHYVHHKYGMWHHNFGLGVDWWDHVFGTYKPVDWLTEKEVSQASGYFALKWW
>NC_019780.1|WP_015230603.1|3170584_3170899_-|DUF962-domain-containing-protein
MSYFQEAKTHFIASHQNPINQALHHIVNILVFVGIGYLFIDWRVALLCGVLTQVLAIGGHIVFEKNEPAFKQYPGIVIIVSMIWSFENWFGLRQLLQQTRQESH
>NC_019780.1|WP_015230602.1|3169153_3170545_-|amidohydrolase-family-protein
MYNGLLVIDADAHKLENPLIMRDYLEPEYRDRIGLVVDSLGDQRAKVVDWNPETKTNDFVRMFPKPQGLGRGVFRGLNPETTLGAMFNKVRLEHMDQEGIDVHTIYGTLNLIFSSILDKDLAVALCKAYNNYMADDCKGYDNRIQPVGVICLQDVEEAVKEMYRCVNELGMISVAVAPNLPIPHPKAPDAFPEIRTCKAISHPDFRPILQAAVDLDIGLGIHGGPGSDMIGGLADHMETFVLSHIFVQRNQQQMALARMVFDGAFEQFPTLRVGFLEGGCGWIPDLAHAFHEHWEKRIRDFDPKNPYRPSLMDFTKLMIQEQGNENNVNIISQARNLFDLLWNKHSDPTKIEDSSLYEHYDLRDRDPLDYFKRGQIFASFESDDPGPSYLPQAMGEVGKHIACFSGDYGHWDGVLKGCVTEAATIADYDRDYLAMLLGGNALKLYGQRLRNVLPENLAVAATR
>NC_019780.1|WP_015230601.1|3168416_3168995_+|Uma2-family-endonuclease
MYSYTLKTAPILALNDEQFCQLSQANPELKLERSPQGNLIIMSPTGGETGNKNAELIGEFIIWNREKKQGKVFDSSTGFKLPNGAIRSPDVAWIEQIRWEQLSAESRQTFPNLAPDFILELKSATDRLSTLQAKLEEYVENGVKLAWLINPTEKQVEIYRQGKEKEVLDNPKTLSGENILEDFCLDLSLVWQ
>NC_019780.1|WP_015230600.1|3165996_3168201_+|alpha-amylase/alpha-mannosidase
MAYPLYVAFVWHQHQPLYYSASGQYHLPWVRLHGTKDYLDLMLLLQRYPQLHQTVNLVPTLIRQLEDYSKGNALDPYLNLTLTPENRLDRAKRQYIIDHFFDGNYRTLIDPHPRYRQLYEQRKNHGAVWCLHHWTQQDYSDLLAWHNLAWIDPLFWSDPEIAAWLEKGKNFTLRDRQKIYAKQLEIIRQIIPQHKRMQENGQLELITSPYTHPILPLLADTNITLIALPEITLPQHRFQWEEDIPRHLENAKAVYQSHFETQPQGIWPSELAISPQILPHLADAGFKWFCSDEAILGWTLKHFFHRNEQGTLYAPELLYRPYRLPTEHGDLAVVFRDHRLSDLIGFTYSKLSPKAAANDFIQHLDAIGASLGEPIEQPWLVTIALDGENCWEQYQQDGKPFLEALYQRLSDHPGLELVTVSEFIEQYPPTATLPSEQLHSGSWVDGNLNTWIGDPIKNRAWDLLTAARETLAQHPEATPENNPDAYEALYAAEGSDWFWWFGEGHSSNQDAIFDQLFRDHLAKIYQSLSLPIPHELKQPLESHQRKKSHPPLSFIHPFIDGIADEQDWDKAGRIDIATSGAMHQNSDITRLWYGLDHLNFYFRFDFKKGGQPGTNLPPELHLFWFYPGVTLLNSRLPLQNVPQHPPLDYFYHHHLGINIVEEIVWLEEATDNNRWFGRRTRAKFHFNECLELSVPWEDLGMSPDIFMNIIVVFSDHAQFRSYYPEKEFIVLQIP
>NC_019780.1|WP_015230599.1|3164307_3165891_+|NAD(P)H-quinone-oxidoreductase-subunit-N
MDFTSNVSAQLNAGLILPEGIVIITLLIVLVGDLIVGREGARVLPYIGIGGLLTSIAVLYLQWNTENPIALLGSFSADDLSIVFRSIIALSTAVTILMSIRYVEQTGSALSEFITILLTATVGAMFLSGANELVMIFVALETLSISSYLMTGYMKRDSRSNEAALKYLLIGAASSAVFLYGSSLLYGLSGGETSLPKIAAGIAQTEGGELAGAIALVFMIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLLVVAFPLEQPQWRLIFTALAILSMILGNAVALAQSSMKRLLAYSSIGQAGFVMIGMVAATEAGYASMIFYLLVYLFMNLGAFTGVILFSLRTGSDQITDYAGLYQKDPLLTLGLSICLLSLGGIPPLAGFFGKIYLFWAGWQAGLYGLVILGLVTSVISIYYYIRVVKMMVVKEPQEMSEAIQNYPVLRWNLPGMRPLQVGLVFSLVVTSLAGILSNPLFSVANASVQNTEFLQGVSGVQEAKAESDQLSLNPTAPAILDK
>NC_019780.1|WP_015230598.1|3163256_3164090_+|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MTSNWQKVKEYEDIIYEQGDGIAKLTINRPDKRNAFRPKTVFELYDAIARIREDTSIGVVLLTGAGPHTDGKYAFCSGGDQSIRGKAGYIDDEGTPRLNVLDLQRAVRSLPKVVIALVAGYAIGGGHVLHLICDLTIAADNAIFGQTGPKVGSFDGGFGASYLARIVGQKKAREIWFLCRQYTAQDALEMGLVNTVVPVEQLEAEGINWANEILEKSPTAIRCLKAAFNADCDGQMGLQELAGNATLLYYMTEEGSEGKQAFLEKRKPNFRDYPWLP
>NC_019780.1|WP_041235529.1|3161718_3162222_-|DUF4149-domain-containing-protein
MNTIFYQKQNPTQWSVVVFVTLCFWLSASLMLDFVIIPSLMQAGMMTQSGFASAGYAMFGLFNHVELLCAGIVLTGVLALNKNHTFSKTQQQWSVILGGLLLLIALICSYFLTPQMSGLGLDLNWFDSGNSMSAAMMEFHGAYWGLELMKMITGGILLVWSFRAWKP
>NC_019780.1|WP_015230596.1|3161135_3161414_+|TMEM165/GDT1-family-protein
MDWQLLGLTFITVFVAEIGDKSQLAAIALGGNSKFPTAVFLGCIAALLTASFLGVMLGGGVAQLLPTRLLKTMAAIGFTLLALKLLIFEETD
>NC_019780.1|WP_041235531.1|3174773_3175112_+|hypothetical-protein
MSSRPHQRSIPPKISSIPRQKSEATTHLEIYKMSVEKHRLQQELKNLKNREKQISKRLKQIEQHTEDLLSQVHSPEEISSSPQPSKISKGKIEEGFSSPQSAFDFEQVYVDY
>NC_019780.1|WP_015230608.1|3175292_3176237_-|methyltransferase-domain-containing-protein
MNSFVLTFGIAALLFSTGLVSYLATARRYQSSDSVANSYDEWTEDGILEFYWGEHIHLGHYGTPPQRKDFLQAKADFVHEMARWGGLDKLPAGTSVLDVGCGIGGSSRILAQNYGFNVTGVTISPQQVKRAQELTPGGLSAKFMVDDAMSLSFPDGSFDVVWSIETGPHIPDKESFAKELLRVVKPGGLLVVADWNQRDVRQKPLNAWEKPVMRQLLDQWSHPEFSSIEGFSETLEATGFVEGKVITDDWTQATLPSWLDSIWQGIVRPRGLVKFGVYGFIKSLREVPTLLLMRLAFGTGLCRFGMFRAVRTNQ
>NC_019780.1|WP_015230609.1|3176398_3176992_-|dephospho-CoA-kinase
MTNGEVKQIIGVTGGIGTGKSTVSNYLHKVYNLPILDADFYAREAVSKESRILEAIKQRYGKQILQEDGSLNRSKLGKIIFNQPAEKQWLEQKIHPYVRQCITSELNHLSTKQVVVVIPLLFEAEMTDLVTEIWVVYCSPQQQLARVMARDQLSETEARSRIKAQISLEEKMALADVVIDNSGSTSELQQQIDRLLS
>NC_019780.1|WP_015230610.1|3177574_3178390_-|uroporphyrinogen-III-synthase
MSLPLSNQTILVTRAAKQSKTFRHLLEKQGATVIEMAALEIRPPSTWEHLDQALRQLSSFDWLILTSANGVKFFFERLKQLSIDRRLLDSLKMAVVGQKTAAVLEKEGIKPTFIPPNFVADSLVAKFPENLSKQKILFPRVESGGREVLIQEFQAQNAEVIAVAAYQSGCPKTVDPIAIEALKTQTVDIITFASSKTVQCFYNLLISELGSRVRLREVLAEVYIASIGPQTSQSCQELLNQCDIEAKVYTLEGLTEAITERISGGKRQEFQ
>NC_019780.1|WP_015230611.1|3178482_3181314_-|excinuclease-ABC-subunit-UvrA
MSDSSSPSIRIRGARQHNLKNVDLELPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDAIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGEPHCPHCDRAISPQTIDQMCDHILELPDRTRFQLLAPVVRGKKGTHQQLLSSLASEGFVRVRVDGTVRELTESIKLSKNKAHTIEVVVDRLIKKEGIQERLADSLATTLKHSDGLAVVEILNETSEEKPPQEIIFSENFACPEHGAVMEELSPRLFSFNSPYGACSNCHGIGKLRMFSPELIVPDPKQPVYSAIAPWSEKDNSYYLSLLYSLGEAYGFELQTPWKKLTVEQQNIILYGSNEPIFVYEDARGREIRGYEKQYWGVITGLERTLENASDTYKQKLEQYMVDQTCEVCGGKRLKPESLSVQLGQYKITELTGVSIAESLNRVQHLKLSSKQAKIGELALKEIEARLQFLLDVGLDYLTLDRPAMTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNGKLLETLKKLRDLGNTLIVVEHDEETIRNADQLVDIGPGAGIHGGEIVSQGTLKTIINCKKSITGDYLARRRVIETPTERRKGNGKSLYLINAYANNLKHIDVEIPLGKLVCVTGVSGSGKSTLINELLYPALQHRLGYKIPFPKGLENLKGLNAVDKVIVIDQAPIGRTPRSNPATYTGVFDPIRSVFTETVEAKARGYKAGRFSFNVKGGRCEACNGQGVNVIEMNFLPNVYVECEVCKGARYNRETLQVKYKGHSIADVLHLTAEEALKVFENIPRAATRLQTLVDVGLGYIPLGQPAPTLSGGEAQRIKLATELSRRATGKTLYLIDEPTTGLSFYDVHQLLNVLQRLVDKGNSVLVIEHNLDIIRCADWLIDLGPEGGDKGGEIMVTGTPEMVAKETKSYTGQYLLQ
>NC_019780.1|WP_015230612.1|3181544_3183053_+|polyamine-aminopropyltransferase
MTSKQRNLLLLAAAISSASGLASELLLGTLASYLVGNEALSYGLALGGFLAAMGVGSYLSRFVGNEKNMLLTAFMTVELLIAPLNAILPVGLFLLFIVGGEIWLGLALVTLILGTLAGLEIPLLTRMVEQEEGVKEALAGVLAMDYFGALVGSLAFPVLLLPLVGMFPAAAILGVFPAVMVFLLGRAFPQLRQWRIWGLSIALGLTIFAVIVISFTQRLEDNLYGAPIMQRTQSSYQRLVLTRRGNYVRLFLDGDLQFSSSDEYRYHEGLVHPALTAVSRPQKVLLLGAGDGLGLREVLKWDTVEEVMLIELDPKVVEWAKTYPALVEANQNAFSDSRVEVRYGDAFQVVSQLEANFDVIIADFPDPDRNVLAKLYSLGFYQQLKAHLSPRGVFVTQGSSPFFAPKAFSCIAATLEAVDFQVHPYTVNVPSFGPWGFVLATSTPFHPEQITELPIKTRFLSSAMLPSLFVLPKDFQPQAVEINTLAHPVIVNYERDRRWVLY
>NC_019780.1|WP_015230613.1|3183367_3186073_+|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase
MTQTHDPAHDYLGIRQPLDGIFNPKSVAVIGASEKPGSVGRTLLWNLISNPFGGTVYPINPKRNSILGIKAYPSLDAISDPIDLAIIATPAPTVSEIVKSCTRKGVKGAIIISAGFKEIGEAGIALEQEIKAEAQAHQLRIIGPNCLGVMNPHSGLNATFGSAMALPGNVGFISQSGALCTSILDWSFRENVGFSAFVSIGSMLDVNWGDLIDYLGDDPNTHSIVIYMESIGEARSFLSAAREVALTKPIIVIKSGRTSAAAAAAASHTGALAGSDDVLDAAFRRCGVLRVETIDDLFNLSEILAKQPRPQGNRLTILTNAGGPGVLATDALIRRGGQLAELAPATITALNECLPTHWSHGNPIDILGDADPQRYKSAIEVVATDPNSDGLLVILTPQAMTNPTAIAETLCQFSHLKGKPLLASWMGGNSVEAGEKRLNEANIFTLPYPDTAAQVFNLMWHYSYNLQGIYETPILTEGKAPDRAQVEEIFKSAQKSGRTLLTEYESKKLLSAYQIPTVETRLATTVEETLTAAESIGYPVVLKLSSETITHKTDVGGVKLNLKDAEAVRSAYESIRDAVATAEFQGVTVQPMLKLDGYELILGSSLDPQLGPVLLFGTGGSLVEVFQDRALALPPLNTTLARRLMEQTRIYKALQGVRGRSTVDLEALEEILVQFSQLVVEQPQIKEIDINPLLAQTSENGGIIALDARVVLHSETEKRPKLAIRPYPHQYITQWELNDKTPVTIRPIRPEDEPLIRSFHETLSEESVYLRYAHLIKFSHRIAHTRLTRICFIDYDREMALVADYQDEQGKHQILGVGRLSQIKGTHTAEFGMLISDRYQRQGLGTEFLSQLLHIGKLEKLERIVAYILPENRPMQKICQRLGFEVKEDKEEGMMVAEINL
>NC_019780.1|WP_015230614.1|3186372_3191013_+|hypothetical-protein
MPPRPPRVLRRLWRSLQELVRVVMQKLKRLFIILLPINKNSQLKKGFVLPTATLVLLVVSLLVGALIVRTGQEAEQAISQQAQQEIYNAATPAIERAKAKIEFLFRKDNRFPAGIPSEEFLNSMMLNNGGIDSDGDAIDIQITAQDPDRYTLSDEDRLTIANDSSAENAWRYRTDTDGDGVDDSTVSYSITILSETDDGSGTTVNINNSESDKANNLVVRSGPVSAGATSDAQTCEDLASLDASEGWYTVTGSTVRKNFQINAVVTNDNEANKAVSTLEVQQDRDLSTGNKWGAWFRYDLEFTPGSNFNWNGAMFTAGSLLVNNSGTKTTRLRLVSSPSSCLYTKQASQITMAEEEDPDTGQTTFQGQVMRVDTDRDEWERNDDDRVLVDLFPGPNQRPQNTGSNPPYETFELPMHDDNPNSGGPEDSVIDSDVVRPSQYMLDPVLLISENTSQARYEDDPTNTAVRNEDWEDNPLSTRIFNQNANQPFVDDTYRADNRWGPKPQYNNNPDYQVTAANNGTEITGQEGLTKMPTIADPNVAGLDGYWERRANVEGMRIIVGESFQLGLPPGASPSNEVTNAKIAYIEFENHTLPSGNDKINFQPSGFSTPSGFKADTGEAYGDRGGGDKYGWLDSDGNPSANGETRDRGGSPPEKVTLNHMDLGDSNLQWQVEVPNGTYELKIVMGDDDYTNQDNSIALEPFVPPGDTPPAVQAGAVYHWDGYQDEPATCIALAGHPGVSESTQFDNVTVGGTDYLETDFLNRKGSNGWEFPFYANFSTEIDNSTSILRQSLSNLAHYAGDPDGAFPPTQDDGSNSDAVTHPYPQLTKSGNFSNLRRAISELDATGTNYADLSLADQTTLQTATCTLGMLAYNVDLVERVYDAIPDNGGAGLNALGVQISQLIDGDITNGEMGGDPDNLCESGDSFGDDGCPPEDPYSVTDPTSPNHFSNYYTQFTSQEWINVIEANNLLGADTAQATERAEQITRFRQIERDRTLGFAEGIGVPNSGGSSDYDADNTQFAIGFDDGNFVSGQTFNGIECDPTTYATSGGNSARAQFGLAVGFCSAGQPKYPWLFYLFPVIDHDHNGDSSDGNEQPTSEPYISDTYIFDDSMAGTPGGVNGDYTYQAISATDIASLALTPRDADSFVLPTTTSDTGTGNRIFKPDGNPLFVPFMDKAIYDDREKMDVRLLDIDLDLLRSNTTGNTNDDYWLPTSSSDRDAGVVYAFREDAVREDAIARPFNNDWATCGNESMLTGLDLTTGNVLSNLSTSDTCRMQPSIPQDPPLNDETGVSAKPVDGYADPDRRPYGFRLKNGSDLSRSNSDSTGLSFITDQPVYIQGDFNKHTQEEFTDTSSSFYDRSTLNTNFATAAGETWRSSEIIADGITLLSEGLTDQATTDQVSPSPSDDIEVNSILVSAIIPSQPKKYNGGIHNFPRFLEDWEGTGGTVKIRGSFIQLNFSKYATGSFDQDNLDSESPQNLSAGANLPHYSPPTRNWGYDVGLQYVSAAPVAERFVSSESPRTETYRELPADDPYIQNLLDGTVVSTP
>NC_019780.1|WP_015230615.1|3191028_3191727_+|type-II-secretion-system-protein
MNQLPVSQTIRGVSHSQKGLTLLEVTVTIVMLSVILMAMAPPLLISAATRVKLRRASQARLLAQEEVNRVQGIMMRSRDQSLPANANIPPISNASNLAETAVPTTIVDTYPSSVTEAQAVDVDQDGANDFFVQVFREQGALFAAGPAPCEPAVFRMGVRVYSILAEDNLNSNSDSLEKEQISLQFTNGLQGQTTNPMGAFQAEVSRNDREFSLEAYEDYLAGSGVPAACTSQ
>NC_019780.1|WP_015230616.1|3191785_3192793_+|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MKTFLHKFLTHLNQKKNRLPFSLGFTLIELLIATVMSSIVISSLLYLMLNVMQTNAKETARKDTLQEMQVALNFMTNDLREAVYVYTGEELDDRGIDTPNDGLKDIMNLPNSGNLEPILVFWKLEDAPYQSSDSFPSDCSAASVEASERTCDQLKISRRTYTLVAYLQDSDPTDTWQGESVIYRYQLRKYNSNPFNTLEKKPEYIDPVKESSFASWPYDDTGSLPNSGSYTLTVNRGSVGDGGKSDALVDFVDRHDNSNFSATDVSCPTGYQRTPSDASVSNSFYACVEDVSGQKTVTVYLRGNPDGRANVNFADGFTPLPTLQSSVVLRGANQD

Crispr_ID: NC_019780_45

• CRISPR_ID: NC_019780_45
• CRISPR_location: 3218323-3218425
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_45

Consensus_repeat	Method
CAAGGGGGGCTAGGGGGGATAAACT	CRISPRCasFinder

spacers of NC_019780_45

>45.1|3218348|53|NC_019780|CRISPRCasFinder
ACTGTGTTGGGTTGCGTTCCCTCCACCCAACCTACCGTTACTTTCCCCCCTTT

CRISPR arrays and Neighbor proteins around NC_019780_45

CRISPR arrays

The CRISPR arrays of NC_019780_45

>merge|NC_019780|45|3218323-3218425|CRISPRCasFinder
CAAGGGGGGCTAGGGGGGATAAACTACTGTGTTGGGTTGCGTTCCCTCCACCCAACCTACCGTTACTTTCCCCCCTTTCAAAGGGGGCTAGGGGGGATAAACT

>NC_019780|45|43|3218323-3218425|CRISPRCasFinder
CAAGGGGGGCTAGGGGGGATAAACT	ACTGTGTTGGGTTGCGTTCCCTCCACCCAACCTACCGTTACTTTCCCCCCTTT
CAAAGGGGGCTAGGGGGGATAAACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230638.1|3220628_3221312_-|DUF4079-domain-containing-protein	unknown	unknown	gnl|CDD|372553
NC_019780.1|WP_015230629.1|3208116_3215001_+|hypothetical-protein	unknown	unknown	gnl|CDD|275057
NC_019780.1|WP_015230635.1|3217466_3218138_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl|CDD|234637
NC_019780.1|WP_015230633.1|3216692_3216941_-|30S-ribosomal-protein-S16	unknown	unknown	gnl|CDD|176950
NC_019780.1|WP_015230644.1|3227922_3228171_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230636.1|3218456_3219677_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187565
NC_019780.1|WP_015230641.1|3225579_3225855_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|340594
NC_019780.1|WP_015230642.1|3225896_3226337_+|DUF2996-domain-containing-protein	unknown	unknown	gnl|CDD|371420
NC_019780.1|WP_015230626.1|3201947_3204254_+|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193
NC_019780.1|WP_015230640.1|3224178_3225474_+|threonine-synthase	unknown	unknown	gnl|CDD|236065
NC_019780.1|WP_156800819.1|3206445_3207678_+|ISAs1-family-transposase	unknown	unknown	gnl|CDD|379382
NC_019780.1|WP_015230637.1|3219836_3220670_+|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|376806
NC_019780.1|WP_015230627.1|3204355_3205294_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230643.1|3226581_3227424_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230628.1|3205407_3206346_+|hypothetical-protein	unknown	unknown	gnl|CDD|273806
NC_019780.1|WP_015230639.1|3221795_3224036_+|glycosyltransferase	unknown	unknown	gnl|CDD|274400
NC_019780.1|WP_015230634.1|3217039_3217288_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230632.1|3216283_3216700_-|KH-domain-containing-protein	unknown	unknown	gnl|CDD|224750
NC_019780.1|WP_015230631.1|3215294_3216251_-|PhoH-family-protein	unknown	unknown	gnl|CDD|224616
NC_019780.1|WP_015230645.1|3228157_3228499_+|mRNA-interferase-PemK	unknown	unknown	gnl|CDD|367091

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230638.1|3220628_3221312_-|DUF4079-domain-containing-protein	gnl|CDD|372553	pfam13301, DUF4079, Protein of unknown function (DUF4079). This is an uncharacterized family of proteins.	2.74914e-40
NC_019780.1|WP_015230629.1|3208116_3215001_+|hypothetical-protein	gnl|CDD|275057	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A. Members of this protein family are found, so far, exclusively in the genus Acinetobacter. Members average just over 600 amino acids in length, including a 22-amino acid C-terminal putative protein sorting recognition sequence, GlyGly-CTERM (TIGR03501). The GlyGly-CTERM signal always co-occurs with a subfamily of the rhomboid family intramembrane serine proteases called rhombosortase (TIGR03902). Members occur paired with a second rhombosortase target, with which it also shares an N-terminal motif CSLREA. This protein is designated Acinetobacter rhombotarget A (rbtA).	7.14248e-12
NC_019780.1|WP_015230635.1|3217466_3218138_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl|CDD|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	4.53248e-64
NC_019780.1|WP_015230633.1|3216692_3216941_-|30S-ribosomal-protein-S16	gnl|CDD|176950	CHL00005, rps16, ribosomal protein S16.	1.54374e-37
NC_019780.1|WP_015230645.1|3228157_3228499_+|mRNA-interferase-PemK	gnl|CDD|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	0.00225021
NC_019780.1|WP_015230628.1|3205407_3206346_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	7.72057e-07
NC_019780.1|WP_015230641.1|3225579_3225855_+|MoaD/ThiS-family-protein	gnl|CDD|340594	cd17074, Ubl_CysO_like, ubiquitin-like (Ubl) domain found in Mycobacterium tuberculosis CysO and similar proteins. CysO, also termed 9.5 kDa culture filtrate antigen cfp10A, together with CysM (Cysteine synthase M), forms a protein complex CysM-CysO that represents a new cysteine biosynthetic pathway in Mycobacterium tuberculosis. The replacement of the acetyl group of O-acetylserine by CysO thiocarboxylate to generate a protein-bound cysteine is catalyzed by CysM in a pyridoxal 5?-phosphate (PLP)-dependent manner. The family also includes QbsE that functions as the sulfide donor for the biosynthesis of thioquinolobactin in Pseudomonas fluorescens. A JAMM motif protein QbsD catalyzes removal of the carboxy-terminal dipeptide from QbsE. Both CysO and QbsE are similar to prokaryotic sulfur carrier proteins such as ThiS and MoaD, containing the beta-grasp ubiquitin-like fold.	8.57221e-44
NC_019780.1|WP_015230642.1|3225896_3226337_+|DUF2996-domain-containing-protein	gnl|CDD|371420	pfam11210, DUF2996, Protein of unknown function (DUF2996). This family of proteins has no known function.	1.14841e-68
NC_019780.1|WP_015230626.1|3201947_3204254_+|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	2.90797e-174
NC_019780.1|WP_015230640.1|3224178_3225474_+|threonine-synthase	gnl|CDD|236065	PRK07591, PRK07591, threonine synthase; Validated.	0
NC_019780.1|WP_015230637.1|3219836_3220670_+|CPBP-family-intramembrane-metalloprotease	gnl|CDD|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.09398e-07
NC_019780.1|WP_015230627.1|3204355_3205294_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	1.13444e-07
NC_019780.1|WP_015230643.1|3226581_3227424_+|hypothetical-protein	gnl|CDD|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	5.67152e-05
NC_019780.1|WP_015230636.1|3218456_3219677_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187565	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs. Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NC_019780.1|WP_015230639.1|3221795_3224036_+|glycosyltransferase	gnl|CDD|274400	TIGR03030, Cellulose_synthase_UDP-forming, cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.	1.32994e-131
NC_019780.1|WP_015230632.1|3216283_3216700_-|KH-domain-containing-protein	gnl|CDD|224750	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only].	2.39733e-21
NC_019780.1|WP_156800819.1|3206445_3207678_+|ISAs1-family-transposase	gnl|CDD|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	4.26532e-21
NC_019780.1|WP_015230631.1|3215294_3216251_-|PhoH-family-protein	gnl|CDD|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	5.006e-138

Protein sequences

>NC_019780.1|WP_015230635.1|3217466_3218138_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MLPEFKEIWQDTLEWFPSEEQQQQFEQLYQGILVGNRQCNLTRIIEPEAFWEKHLWDSLRGIIPLGLESYTTASFLDIGTGAGFPGFPCAIALPYTTVTLLDSTGKKIAYLNTLISELQFSRVKTLLGRAETLGKQSSQRNKYDFALLRAVASASVCAEYAFPFLKVGGTAVLYRGRWTPEEAESLNLTLNQLGGYLEKIETFITPLTAGERNCLYLKKTSMR
>NC_019780.1|WP_015230634.1|3217039_3217288_-|hypothetical-protein
MLKTLKPEQAIVVKLSSDVSVRTTIPESHYPALRSGFEGYPPNPRWNVSKFRAWKTGQQWRNDLKEGKMKVRRDRMLVFAKS
>NC_019780.1|WP_015230633.1|3216692_3216941_-|30S-ribosomal-protein-S16
MVKLRLKRLGKKREASYRIVAMNNSSRRDGRPLEELGFYNPRTKETRLNVPAIVKRLQQGAKPTETVDQILKKAQVYQQVNV
>NC_019780.1|WP_015230632.1|3216283_3216700_-|KH-domain-containing-protein
MSNYVNSSPPESNQPQYAELVRFLLTPLLDFPESLRIDCEATKSNQRIWIRVALASKDQGRAFGRGGRNLSAIRTVLTAAGLTKQQSVYLDVYGKPEKTEEGGNKPTSNVGQPKKTVGKEGKKKPQKRSKPTPTLASE
>NC_019780.1|WP_015230631.1|3215294_3216251_-|PhoH-family-protein
MTEAVKTIALPSSESAIALAGPQEANLKTLSRQTGAKLVMRGQDLLITGQEKAVERCLAVVRSLKPYWEQGKAISEAEIMTAFQARDTGRLEDYQDLQKNVLARTRKGEQIRAKTFRQRQYIKAIQSHDVTFCTGPAGTGKTYLAAILAVQALLKGDYERLILTRPAVEAGEKLGFLPGDLQEKVNPFLRPLYDALYELIDPEKIPDLMAKGTIEIAPLAYMRGRTLNNAFVIVDEAQNTTPAQMKMVLTRLGFSARMVVTGDVTQTDLPYPQQSGLITALKILRSVEGIAVCEFSQGDVVRHPLVQRIVAAYEKYEM
>NC_019780.1|WP_015230629.1|3208116_3215001_+|hypothetical-protein
MSISPNPLFQTWQDTLTEAAANGRLLAAAKEALRLEATPNPLAELIRQWQTGDFSQLPAVELLSSEAMSGAMGAYGNETIYLNEDWLSTASEEDAVAVLMEELGHHLDQVVKVTDSRGDEGAIFASLVQGNELSKHELASLRRENDSTTLEINGETVFVEQAEFTVTNTDDSGEGSLRNAIEQANSSEGADTITFDSSLSGETIGLTSGQLKITDSLTIEGLGAEELTIDAEGNSRVFEIDDSNDENIINVELTKSTITGGSTDSYAIEEIVVGGGIFNAENLTISNSTVLGNSARDGGGIFNAFNAENLTISNSTVLGNSATDGGGIFNFGNLSLSNSTVSGNSAVFGGGIHNPVTASLSNSTVSGNSAAFGGGIENRNGNLSVSNSTISGNSGRGISSLYATLSLSNTIIANNENGSDVALNDRSTINRQGVNLIEDGSLTGENIINQDPNLSSLQNNGGSTKTQVPQDGSPAIDAGDNAFLSESELSIDFNGDGDTDDTLNTDQRGEGFDRVVNGTVDIGAVEVQDISGEPTASNSVVTWGRSVGGGDLTGEDSDSTTGVPGGELNNVQDIFSTSGAFIGGAFAALKEDGSVVAWGLDNRGGDLTGSSDFATGVPRGELDNVQNIFSNSNAFAALKEDGSVVTWGSSERGGDITGEDSDVATGVPGGELDNVQDIFSSERAFAALKEDGSVVTWGFFFYGGDLTGSSDFATGVPGGELDNVQNIFSTSGAFAALKEDGSVVTWGNDLWGGDLTGENSDETTGVPGGKLDNVQEIFSTSSAFAALKEDGSVVTWGLDGSGGDLTGSSDFATGVPGGELDNVQDIFSTSGAFAALKENGSVVTWGSSESGGDLTSENSEDATGVPGGELDNVQDIFSNSWAFAALKEDGSVVTWGDSSEGGDLTGSSDFATGVPGGELDNVQDIFSTNGAFAALKEDGSVVTWGNSSEGGDLTGENSEDATGVPGGELDNVQDIFSTGWAFAALKEDGSVVTWGDSDLGGDLTGEDSEDATGVPGGELDNVEDIFSTGSAFAAIVGDDLSSDPIAPEIISREPFAASIDTVQVGDTLFTVDVNPGDSNEDDLQFSFTENLPEFSIDPNSGEITLEQAVEGDDNFGFGVVVEDQQLGLTSEPEQFSVEFTTDDNPDDPDDPNRITAGPFLLRAKQGFTEEGERLTASGTIEIGFDQPSFQPLLKADGEIYYKQDTRTLGGNAEIFAVPTFFDPAPSIFDGDLDEFSLPEDEAVNVVNLFEQSVPISIEGNALELEKIEDFSVDALIDQKALQLQGKVTAELEKFDDFIFTGDLAGGDPENPNRIELSPNGWEMKGAFELGAEDDGNDLSFGGAQWGIQGVQVEIDTFKDEYGGGASIKTPIATVEGSFLLDIEERGLKVFEEVSLGASDLDLPIGNTGAYLQEIGGTLSDIGEGIPSFGGDIEFSAGPELDQLELDEIIEAWGFEIGVAIPERLASLNLGGSLEFADDKTVIEAGANPQENSLEILAGILLEANADLRMELGDSRSQFNLSGDLDILNGFVTADASLSATIQKVQNSVEFAISAQGSASANVPDFIPFLGGTPIPEANFAFEYDTQAPSSENFIAGWGDVRFFREEKGVRLNFDGSREILGSDKITSIETQQLSTQSVQLASSTDSFATADMGTVTLESQEPATPSLKLATVTESFVASETFPITADMGIVTFTATWEEPTSNPNLQLEAPDGSRFNRDDIANNDALELVDDLSDDTSQTIAADFNTLETGDWTFGVTDADSLGDINFSASEILEPVTLDLTLPEEEQEVTPGDTINLDYQVENLAEAGSLRLFYDTESEGFSGTPIDQINFSEDESGSFEWEVPDLDNGDYHLYGLLEAGNQVPELKYAPSFISVEQPELTLSDVSYELSATEDTTVEFELALSQPSAESITVDYRTSSATAIADSDFASKEGELTFEPNQETATIEVEVFASPDLLGEYAFSLQLSNAENAFIPEGENRAVATPETFNIAGDSPNVVEGTLEELDSKTIIGFEGDDTLRVRNTSFEQEQLNVTEGSAILEIDVNDDGEVDSTITLEGDYSGGEFVTEQTEDDTEISFDESVEKSLTFSEAVFGSLDDDILESDLDFEGDGNIIFSGDGNDFVDASNTSDGNRLYGGSSNDELFAGTNDRLFGGDGDDLLNASQGGGNNRLYGGSGNNTFFAGTNDRLVGGEDNDRFFLSEGEGNNTVTGGTGEDQFWLADGQFAEQANIITDFTSGEDVLGLAEVELEFSNLTIGASEENPEDTFVQANGQDLAVLLNVEADTLSQTDFVFT
>NC_019780.1|WP_156800819.1|3206445_3207678_+|ISAs1-family-transposase
MGATLTIPPTPLNKAGLFHSRGKIVNVKRDRDNKSVARSRISRKISDMSSLISYLKQVKDWRDRSGQRHPLWWVLFIVILGLMMGNLSYRDLAAFGKNKHYYLTRLGKSPKLKSPSYSTIRRAMMGVDNNDLIQVFNQWAAQLSSPDELSNWIAIDGKSIKSTLTDTYGNKQNFASIVSWFSQDNGLVLALEKLENKKTSEIYCVREMVNNTPLSNQVLTLDAVHCQKETIKTINRSRNDYVIAVKKNQPKLYNRLEEIAHNQISDQEDIRTETSHGRQVTRTVSVFRIPETLQEIWISSQCFIKVERKGTRKNKPYHQIVYYLSSCYQTAQNFSKKIQGHWGIENQLHWVKDVIFSEDVSPVHHLQSAVNFSVLKTICLNLFRLLGFLSVTEARRWLGERLWLLPILIE
>NC_019780.1|WP_015230628.1|3205407_3206346_+|hypothetical-protein
MTRTIYDQFSKDCLEELLSLAGKVEIDLKVASEVREIDVFFTPNPDQIETLNQLGTLGRIGLTPAIIEPYRNPINANEVRKCLKKSFDIEANLQRRAKREGTSTQAPPTLWILSPTISDAVLNQFNAKPDLENWLPGIYFVAEGLRMVLIAIHQLPRTEETLWLRLFGRNQVQLQAIEELQQLPKENQFRDRILEIVANLIAILEVRREEQENLESEEGEFLMQLSTIYTQRLEEATQKGIEQGIEQGIEQGIEIGEQRGEQRGIEIGEQRGIEIAQKRLAQNLLSQGMEVEQVAKLTELSPEEIRKLITSN
>NC_019780.1|WP_015230627.1|3204355_3205294_+|hypothetical-protein
MTRTIYDQFSKDCLEELLSLAGKVEIDLKVASEVREIDVFFTPNPDQIETLNQLGTLGRIGLTPAIIEPYRNPINANEVRKCLKKSFDIEANLQRRAKREGTSAQAPPTLWILSPTISDAVLNQFNAKPDLENWLPGIYWVAEGFRTALVAIHQLPRTEETLWLRLFGRNQVQLQAIEELQQLPKENQFRDRILEIVANLIAILEVRREEQENLESEEGEFLMQLSTIYTQRLEEATQKGIEQGIEQGIEQGIEQGIEIGEQRGEQRGEQRGKELTQREIATNLLNTGLEIEQIAQVTGLSPEEVRKLMTSN
>NC_019780.1|WP_015230626.1|3201947_3204254_+|single-stranded-DNA-specific-exonuclease-RecJ
MSNWEILPQTKLPQEFLNAVETYHPQYGKYIAQLLWQRGIYNLESLKEFIDPDAYSPTSGFEGFGQQMKLAIQRLKQGWEKEEKVTIWGDFDADGVTATSVLWEGLKPFFNQTLSYYIPDRLKESHGLNEQGLRQLAAAGVTLVITCDTGSTNLEEIKIAKTLGIDIIITDHHTLPLEDPEFVAILNPKYLADHHPLYHLSGVGVAYKLVESLYESFPNFVEQPAENLLDLVAIGLIADLVELRGDCRYLAQKGIKKLAQQRSNPTRPGVAKLLELCKKSGDRPMDISFGIGPRINAISRIQGDASFAVELLTSKAEKTCQELAQKTEMANSRRKQLQKETEKAVKQRIKDLDLSTTGVIVLADSQWQPGVLGLVAGQIAQEYARPTILLSIDFSSEEEVNFARGSARSVQKIDLYELLRSQQHLLHRFGGHPFAAGLSMKVENIAIFREAINQKFRRQYQSLSLEPSLNIDLTVTVAELGQDLFQALKLLEPYGMGNPLPRLLIKNGWFTQVWNKNIQDFTGKQVKYIRTTFYLCDRTNPDGFPGMWWGHYKEELPEDTYFDAVVELDFNTYEKRYEVRLVEIKPSREQTSDQNRESEEAFLLDYRGENPDSIEHYLSKQPSVLNVETCPRHWEELKQSVQSGIKENCPIALTYSGFENVSAKETWKQLLGIAKYLDRTGEMVSLEKLQNKLQLSKSVLKIGLKALVSIGFDIKGEESITISKTTLPNDIESEAVTNFLAAIQEEKFRCQYFSEVPLETIRIVGINQ
>NC_019780.1|WP_015230636.1|3218456_3219677_-|NAD-dependent-epimerase/dehydratase-family-protein
MKVVILGGDGFCGWPTSLHLSKAGHEVIILDNLSRRNIDNELETDSLTPISSMGVRLAAWKEVSGKEIKFYNLDIAQEYDRLLNLLLDEKPDAIVHFAEQRAAPYSMKSPRHRRYTVDNNINATHNTLCAIAESELDIHLVHLGTMGVYGYGTAGMKIPEGYLDIEVVAENGERIPQQILYPPNPGSVYHMTKTQDQLLFAYYNKNDGVRVTDLHQGIVWGTDTEETKLDERLINRFDYDGDYGTVLNRFLMQAAIGYPLTVHGTGGQTRAFIHIQNTVRCVELALQYPPEKGERVKILNQMTETHRVRDLAKLIASLTNTEVAYVDNPRKEAAENELKVDNSCFLEMGLKPTTLAEGLLHEVTEIAKKYADHADLAKIPCTSVWTKDQKAGVPQLKQEVTSSSNN
>NC_019780.1|WP_015230637.1|3219836_3220670_+|CPBP-family-intramembrane-metalloprotease
MSDKFSSFAAPIRIGIFLILLFLTWLPIALSAQFFLGDRPNLLTIITMGWLFILFFILIKAVGKWFYGEHNAYRKIGLFISSQNALELLQGLGIGLSLTFSLFILQGIFGWLNWDNNSLPFWRLILEGSLTGLSVAFAEESFFRGWLLNELERDYSLKIALWTNGIIFAIAHFLKPIPAMIETLPAFPGLLLLGLILGLARRKNQSRLGLSIGLHGGLVWGYYIVDVGELISYTQIVPPAITGIYGNPIAGVMGWLFLFGLILWLKPEKDETRRGSV
>NC_019780.1|WP_015230638.1|3220628_3221312_-|DUF4079-domain-containing-protein
MTLDNWLTLIHPALAVIFVFPLIGIVVNFAWATRQRRLQIKSENKKSKIAPTVGKDHVQLGKWLSASVVGIVLVALAHAIISKNIIKNELFTNQPLQAIFIILMFGLTIASLVFLYKAREKKWRGIFATLTGVGLVILGSQEGVFRRTAEWYISHYYSGMLAALLMIFSLAIIDEIYKDKSLFWRKVHIVLNSIALLLFIGQGMTGVRDIFEIGLYTPPPGFIFFGL
>NC_019780.1|WP_015230639.1|3221795_3224036_+|glycosyltransferase
MTVSEFNTQHLFRRFRLRLLRLRLATLILIGIITIGAGISIAWFAGEGTITELFEQLNQFQANPPQLLEAPMNTSNKYLLIPTFILLAFAFIVTKIIPTPRGWARFVIIIILLSLTIRYLFWRVTTINLDDPLNGTISLTLFALEMLVVVSSAIQLFLMLKIKNRSPQADQLQEAVRKKEFRPTVDILIPSYDEPEFILRRTIMGCQAINYEPKTVYLLDDTRRPHIKKLTEELGCEYLTRPTNEHAKAGNLNNALPKTNGELIVVFDADFVPTSNFLERTVGFFQDEKMALVQTPQSFYNADPIAHNLGLEDILTPEEEVFYRQIQPIKDGAGSVVCSGTAFIVRRKALEEAGGFVTESLSEDYFTGIRLSAQGYHLAYLDEKLSAGLAAENIGAHITQRIRWARGTLQAFFIEANPLIIKGLSIKQRLAHLEGLLHWFTSFSRIFFLLMPLAYSFLQVLPLKTTIEEVIYFFLPFYLVQLTVFSWLNCRSRSGILSDVYSLVSAFPLAITVIQVMIRPFSSGFKVTPKGVKGEQKIRFNWILALPLVILFILSAISLWRCLGMAFLHTNHDWRLGWVWSGYNLLMLGIALLILLDIPSQDVYQWFNLRRIVAVKLGRETIWGVTTKLSEVGLEMTLTHQLELPPNLESYEVELELVEEKIKLQGVITVLEKSDDFPRLKIQLENLTTEQHRQLVELLFCRPGQWLSRSSPGEIQSLFLLFRILIRPHFLFRNRQEIKGVKVAQV
>NC_019780.1|WP_015230640.1|3224178_3225474_+|threonine-synthase
MALATETSNAKPTYTNLVSKEGGTTYDLLPLHVCEETFAPLEVAYDYDAIREQVSRESIAAGPKSIWRYKPFLPVTGEVIDVGTGMTPLVKSKRLARRLGLKELYIKNDAVNMPTLSFKDRVVSVALTKAREFGFSTVSCASTGNLANSTAAIAASAGLECCVFIPADLELGKVLGTLIYNPTVMAVKGNYDQVNRLCSEVANGYGWGFVNINLRPYYSEGSKTLGFEVAEQLGWKLPDHIVSPLASGSLYTKIYKGFQEFVKTGLVEDKAVRFSGAQAEGCSPISQAFKEGRDFVTPVKPNTIAKSIAIGNPADGAYALDVARQTNGNIEDVTDAEIIEGIKLLAETEGIFTETAGGTTIAVLKKLVEAGKIDPDETTVAYITGNGLKTQEAVQGYIGEPFAIDPNLDSFERAWQRSRTLDRLEWQQVLV
>NC_019780.1|WP_015230641.1|3225579_3225855_+|MoaD/ThiS-family-protein
MSVKVLVPTVLQKYTENQAVLECDGSNVKELVETLEQNYPGFKGRLRDEEGKLRRFLNFYVNSEDIRFLEYDKTSLKDGDEVSIVPAVAGG
>NC_019780.1|WP_015230642.1|3225896_3226337_+|DUF2996-domain-containing-protein
MSEEEKSNQETKADSSAKKKEEKEPPIEDKPLPEFIKEHYEPTLKEALTQQGIEDLELEFKTDKFPLPGGEECPQLVGEWDGGKRRFNVYFLDEDISGKKAFSYSATDAPPSTIESFMIDERKVNLDLLVMYTVQRLNGQKWIDRN
>NC_019780.1|WP_015230643.1|3226581_3227424_+|hypothetical-protein
MTRHPFDQLAKQLLEQLLLPCGDVEISKEVPGEPHFIDLYFSPQTNVTPDPQTLGILAAMLQSPGLFEPFRNPPSVEDMESCLLKRLWLVSSLRRRGTFNPNHPPLLWIIAPTVSQNFLNSFSAVKKENWLSGIYELAPALKAIIIVVHQLPKTSETLWLRLLGKGRVQQQAVEEVIALPEEDSRRAIALRLLSIWKVTVEMSPEIPEEEELTMPIPQAFLEWENQVEQRGRKEGQKEAIRTIALNLMQTGMSLSQVSEVTGLSLEEVQNLQADHKESNQ
>NC_019780.1|WP_015230644.1|3227922_3228171_+|hypothetical-protein
MTSPVIAIVKNGKIELLNPLSFPEGTQLLVTPIPSESQVETIETKDEWYNLSLQGLNRCFDENEPEYTLEQIKEFNPDYEGG
>NC_019780.1|WP_015230645.1|3228157_3228499_+|mRNA-interferase-PemK
MKEGDVILASITQADGNLKNRPVLILRIMPKYKDYLVCGISTQLNQYIKDFDEIISVQDSDFVTSGLVSSSVIRLGFLALLPKRKILGLIGSISSTRHQTLLRNLSHYLLKNV

Crispr_ID: NC_019780_46

• CRISPR_ID: NC_019780_46
• CRISPR_location: 3308488-3308640
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NC_019780_46

Consensus_repeat	Method
ATTGAATCTAATGCCAAGTCGATTGAAGCCTTAAGTGAAGATCGCAGG	CRISPRCasFinder

spacers of NC_019780_46

>46.1|3308536|57|NC_019780|CRISPRCasFinder
GAAAGTGAACACGATCGCGCCCATCTTTATCAAGAAATGTCTAATCTCTCAAAATTA

CRISPR arrays and Neighbor proteins around NC_019780_46

CRISPR arrays

The CRISPR arrays of NC_019780_46

>merge|NC_019780|46|3308488-3308640|CRISPRCasFinder
ATTGAATCTAATGCCAAGTCGATTGAAGCCTTAAGTGAAGATCGCAGGGAAAGTGAACACGATCGCGCCCATCTTTATCAAGAAATGTCTAATCTCTCAAAATTAATTGAATCTAATGCCAAGTCGATTGAAGCCTTAAGTGAAGATCGCAGG

>NC_019780|46|44|3308488-3308640|CRISPRCasFinder
ATTGAATCTAATGCCAAGTCGATTGAAGCCTTAAGTGAAGATCGCAGG	GAAAGTGAACACGATCGCGCCCATCTTTATCAAGAAATGTCTAATCTCTCAAAATTA
ATTGAATCTAATGCCAAGTCGATTGAAGCCTTAAGTGAAGATCGCAGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230716.1|3315186_3316320_+|DUF262-domain-containing-protein	unknown	unknown	gnl|CDD|377008
NC_019780.1|WP_041235540.1|3316907_3317177_+|hypothetical-protein	unknown	unknown	gnl|CDD|376160
NC_019780.1|WP_015230712.1|3309267_3309471_+|DUF751-family-protein	unknown	unknown	gnl|CDD|368433
NC_019780.1|WP_015230719.1|3319319_3319760_-|DUF488-domain-containing-protein	unknown	unknown	gnl|CDD|377317
NC_019780.1|WP_015230706.1|3304127_3306755_-|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NC_019780.1|WP_015230702.1|3297942_3299313_-|DUF697-domain-containing-protein	unknown	unknown	gnl|CDD|206646
NC_019780.1|WP_015230718.1|3318621_3319332_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235950.1|3294531_3296856_+|copper-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319783
NC_019780.1|WP_015230713.1|3309523_3310732_-|N-acetyltransferase	unknown	unknown	gnl|CDD|377314
NC_019780.1|WP_015230699.1|3292084_3293176_-|redox-regulated-ATPase-YchF	unknown	unknown	gnl|CDD|236583
NC_019780.1|WP_156800822.1|3299569_3300544_+|penicillin-binding-protein-activator-LpoB	unknown	unknown	gnl|CDD|367655
NC_019780.1|WP_015230715.1|3314033_3315146_+|threonine-synthase	unknown	unknown	gnl|CDD|236013
NC_019780.1|WP_083874449.1|3308722_3309121_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|379312
NC_019780.1|WP_015230714.1|3312345_3313749_+|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl|CDD|223587
NC_019780.1|WP_015230717.1|3317261_3318386_-|RNA-methyltransferase	unknown	unknown	gnl|CDD|236981
NC_019780.1|WP_015230707.1|3306955_3307921_+|restriction-endonuclease-subunit-M	unknown	unknown	gnl|CDD|183177
NC_019780.1|WP_015230708.1|3307936_3308161_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230704.1|3300675_3303156_-|hypothetical-protein	unknown	unknown	gnl|CDD|373353
NC_019780.1|WP_015230700.1|3293296_3294331_-|hypothetical-protein	unknown	unknown	gnl|CDD|368352
NC_019780.1|WP_015230705.1|3303739_3303979_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015230714.1|3312345_3313749_+|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	4.1e-11	37.2	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230716.1|3315186_3316320_+|DUF262-domain-containing-protein	gnl|CDD|377008	pfam03235, DUF262, Protein of unknown function DUF262.	1.77194e-23
NC_019780.1|WP_041235540.1|3316907_3317177_+|hypothetical-protein	gnl|CDD|376160	pfam18737, HEPN_MAE_28990, MAE_28990/MAE_18760-like HEPN. HEPN-like nuclease. MAE_28990 In operon with a ParB nuclease and DNA methylase genes. MAE_18760-like HEPN found fused to HEPN/RES-NTD1, HEPN/Toprim-NTD1, Schlafen and a novel beta rich domain. In operon with ParA/Soj ATPase of SIMIBI-type GTPase fold.	3.27183e-17
NC_019780.1|WP_015230712.1|3309267_3309471_+|DUF751-family-protein	gnl|CDD|368433	pfam05421, DUF751, Protein of unknown function (DUF751). This family contains several plant, cyanobacterial and algal proteins of unknown function. The family is exclusively found in phototrophic organisms and may therefore play a role in photosynthesis (personal obs:Moxon SJ).	9.4941e-20
NC_019780.1|WP_015230719.1|3319319_3319760_-|DUF488-domain-containing-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	9.63301e-25
NC_019780.1|WP_015230706.1|3304127_3306755_-|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NC_019780.1|WP_015230702.1|3297942_3299313_-|DUF697-domain-containing-protein	gnl|CDD|206646	cd00880, Era_like, E. coli Ras-like protein (Era)-like GTPase. The Era (E. coli Ras-like protein)-like family includes several distinct subfamilies (TrmE/ThdF, FeoB, YihA (EngB), Era, and EngA/YfgK) that generally show sequence conservation in the region between the Walker A and B motifs (G1 and G3 box motifs), to the exclusion of other GTPases. TrmE is ubiquitous in bacteria and is a widespread mitochondrial protein in eukaryotes, but is absent from archaea. The yeast member of TrmE family, MSS1, is involved in mitochondrial translation; bacterial members are often present in translation-related operons. FeoB represents an unusual adaptation of GTPases for high-affinity iron (II) transport. YihA (EngB) family of GTPases is typified by the E. coli YihA, which is an essential protein involved in cell division control. Era is characterized by a distinct derivative of the KH domain (the pseudo-KH domain) which is located C-terminal to the GTPase domain. EngA and its orthologs are composed of two GTPase domains and, since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family.	1.72444e-44
NC_019780.1|WP_041235950.1|3294531_3296856_+|copper-translocating-P-type-ATPase	gnl|CDD|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_019780.1|WP_015230713.1|3309523_3310732_-|N-acetyltransferase	gnl|CDD|377314	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition. FemAB_like is a family of both baterial and Viridiplantae proteins with responsibility for building interpeptide bridges in peptidoglycan. Such a function is feasible for bacteria but less likely for the plant members of this family. Perhaps the plant-members are using homologous proteins to recognize bacterial peptidoglcans as part of their innate immune system.	0
NC_019780.1|WP_015230699.1|3292084_3293176_-|redox-regulated-ATPase-YchF	gnl|CDD|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NC_019780.1|WP_156800822.1|3299569_3300544_+|penicillin-binding-protein-activator-LpoB	gnl|CDD|367655	pfam03783, CsgG, Curli production assembly/transport component CsgG. CsgG is an outer membrane-located lipoprotein that is highly resistant to protease digestion. During curli assembly, an adhesive surface fibre, CsgG is required to maintain the stability of CsgA and CsgB.	3.77865e-45
NC_019780.1|WP_083874449.1|3308722_3309121_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.27559e-20
NC_019780.1|WP_015230714.1|3312345_3313749_+|DEAD/DEAH-box-helicase	gnl|CDD|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	4.33951e-158
NC_019780.1|WP_015230717.1|3317261_3318386_-|RNA-methyltransferase	gnl|CDD|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	1.335e-158
NC_019780.1|WP_015230707.1|3306955_3307921_+|restriction-endonuclease-subunit-M	gnl|CDD|183177	PRK11524, PRK11524, adenine-specific DNA-methyltransferase.	4.50445e-47
NC_019780.1|WP_015230715.1|3314033_3315146_+|threonine-synthase	gnl|CDD|236013	PRK07409, PRK07409, threonine synthase; Validated.	0
NC_019780.1|WP_015230704.1|3300675_3303156_-|hypothetical-protein	gnl|CDD|373353	pfam14872, GHL5, Hypothetical glycoside hydrolase 5. GHL5 is a family of hypothetical glycoside hydrolases.	0
NC_019780.1|WP_015230700.1|3293296_3294331_-|hypothetical-protein	gnl|CDD|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	4.79535e-06

Protein sequences

>NC_019780.1|WP_015230708.1|3307936_3308161_-|hypothetical-protein
MSPIDYKAMSDHELKQYFLQNRDDKEALQVYLDRINQHPHEVITTVDAADFNERIQVAVEKKRQGDTSEDRFQR
>NC_019780.1|WP_015230707.1|3306955_3307921_+|restriction-endonuclease-subunit-M
MSNHLQEKKKAPRNRTLSCDDREIQFLSKELLSIKDAVSLEDISNKIILGDTFQVLPLLPSKFVDLLILDPPYNLSKNYNGYLFKEKEKANYTSWFETVIHSIKPLLKNNATIYVCSDWKTSLLIAPILIDHFYVQNRITWEREKGRGAKNNWKNNTEDIWFCTVSNDYKFNVDAVKLKRKVIAPYRVNGKPKDWNEEKSGNYRLTHPSNIWSDITVPFWSMPENTDHPTQKPEKLIAKLILASSEEGDFVFDPFLGSGTTAVVASKLDRKFSGIEQNLEYCCWAQKRLNCVSVDSSIQGYADGVFWERNSLNNQFQAKKQ
>NC_019780.1|WP_015230706.1|3304127_3306755_-|ATP-dependent-chaperone-ClpB
MQPTNPNQFTEKAWEAIVRLPEIAKQNQQQQIESEHLLKSLLEQDGLASSVFSKADVSVQRLRDRADEFIAQQPKISNTGGSIYLGRSLDTLLDRAEKFRQSLEDEYISIEHLILAFADDDRFGKALYKEFGLNEKRLKTVIKDIRGSQKVTDQNPENKYEALEKYGRDLTAWAREGKLDPVIGRDDEIRRTVQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVSRDVPESLRDRKLFALDLGSLVAGAKYRGEFEERLKAVLKEVTEAAGQIIMFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGATTLDEYRQHIEKDAALERRFQAVYVDEPNVTDTISILRGLKERYEVHHGVKIADRCLVAAAMLSDRYISDRYLPDKAIDLVDESAAKLKMEITSKPEELDEIDRKILQLEMERLSLQKEEDTTSKERLETLEKELANLKEEQDELNAQWQAEKEVIDQIRSIKETIDQVNLEIQQAERDYDLNRAAELRYGRLTELQRQRQEAENKLEEMQSSGHTLLREEVAEADVAEIISKWTGIPISKLMASEKEKLLHLEDELHDRVVGQEEAVRAVAEAIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALASNLFDTENALVRVDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEPIRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRLTDSQGRVVDFKNTIIIMTSNIGSDLILDVSGDDSRYDEMYNRVMGAMRENFRPEFLNRIDEIIIFHALQKAQLREIVRLQTQYLEDRLSEQKLSLKLSQEALDYLAEIGYDPVYGARPLKRAVQRYVETPIAKSLLRGEFSEGDSLLGDVEDERLTFKRLPVEMMTIVPN
>NC_019780.1|WP_015230705.1|3303739_3303979_+|hypothetical-protein
MDAYKKYLTISDQKQIVLSNLPFSPGQQVEIIIIAENPPTENLTSRFKKLLKETQALHEESPLSEEDIQTEIDAYRRGE
>NC_019780.1|WP_015230704.1|3300675_3303156_-|hypothetical-protein
MASSTQTPIQLEEKATQSLLDWALAVDHSERSYLEKGAALARRLGAHYREDGLTEIGFWTPELTGEVMRPRAIYLEVFTPQTEIDLRQVKQTVTFKRDRVPMWQQGEYFWGVFSGIQAGTRHQLGSLYWLRYVDPREELQIDRDVVAYSLPFGVFGPAEVYDLNRLQNQRSDLPYFQETAKLDAEGNIPRVPSPCNILQLHVGTASSEGTLEGLTRVYQTISEKLKAGQPLTAAENNYIGYDAVQLLPIEPTIEYRDDYTPISEFFDFQENENEPPDSDHLPLSDEVEIALKKPTTQDWGYDVPIIGSSATNPAILGSLRPDEVVDFVATLHNFSTGPIQLIYDLVYGHADNQAELLINRQFLKGPNMYGQDLNHQLPNVRAIFLEMQRRKINTGSDGIRVDGGQDFRFFNPLTGRVEQDDAYLLEMSDVVQEIGENKRLMFTIFEDGRPWPAEGWEEISTYRDLIELKPESYQWGPLIFAHNTPTLAGFWERKWRRVSEVMYQGDRWITGCGNHDTVRRGNQVDPQENMNWNLGNTLSEVLKNAYDNPATNLWVYGFSPGIPMDFINALMHAPWMFFRNTDERYGVKVVSEEVGFLDWQITEKIYNQEPFFRRLKSLGFETLEQLREFGKALQITMMERDYDLNAVIEAYQSCLGDSTDQCEFPLLMRLNRPEMMQFLKEIDIPKLKQFALMFMEDCYQVCNVSFYGEDLSPERTKFNLKLRQFRKQNRWLHDNLVPGSDRFNKVSEETHTVFYGVRMNPENHEEQVAMVTHQGGEPITVTLGDWLQLDLNQWDCSIVSPGLEIDDLSCFQLKDSQGVLLKLKGN
>NC_019780.1|WP_156800822.1|3299569_3300544_+|penicillin-binding-protein-activator-LpoB
MFTENSVASSFNIDSTPLASKSQTILAQDSMDNSDTLEKPRIAVIDFDFSSVGSPNLLSLIPGGADGVADILVTALVQGGKYTVVERSEIETILAEQNLGASGRIDASTAAEIGKILGVRAVIIGSVTQFDLQRQSGGGGVFGIGASTQDTDAEVAINARVIDTSTAEILYAIDGKGNQSQSDTQVSIFGVRAGSSTSNEGKLLTLATEQAVKEISDAMGEEASAIATLQKPVPQVDAIVANVSGSTIILNKGTNQGYRTGMTVSIERVTDEIKDPETGEILRKLTTQVAEVKLTDVDGKSSLGEIISGAPPKVGDVAKPMVTE
>NC_019780.1|WP_015230702.1|3297942_3299313_-|DUF697-domain-containing-protein
MTANSSSQQTHFNQARASLSQALSWYGNSRRHGKSFPNSELQAAVKEDLQIIKAAYEKLDETVIRIATFGLVSRGKSAVVNALVGKKVMTTGPVNGVTRWPQTIRWTPSSGKVQIELIDTPGLDEVEGEERAAMARTIAQQADLILFIVAGDITRTEYRGLCELREAKKPILLVFNKVDLYPDKDRQVIYQQLRELGTGKEKDELTELLSPQEIVMVSAEPAPLYVRVEQANGEISYEREEQPPQVEALKEAILSILNREGRSLLALNALLQAQTAENHIATETMRLRQEDAETLIWNYTRYKAIAVAVNPIAIVDLIGGTVADLALIRGLARLYGLPMTSYEAGKLWRRILISSGSLLLGEMGTGALLGLGKSGAIIGSGFGTPGAIASYAGLAATQGAIAGFGAYSVGKVAQEYLKQGCSWGPLGPSTVIKDILSQVEGDTIIYRLKQELISWV
>NC_019780.1|WP_041235950.1|3294531_3296856_+|copper-translocating-P-type-ATPase
MMQVSSKATSPVSQENKKTITLDVDGMKCAGCVNAVERQIEQQTGVIAAQVNLITATAIVQYQPDRADLEAIAAQLTAKGFPSQLHDTNQAEAGNSYEEKRQQADQENLQKLAIAGGLILLSAIGHLKHLTGVEIPLLSNIWFHWGLATLALVLPGREIIIDGGKGLWNRVPNMNSLIALGTLSAYIASCVALIFPQLGWECFFDEPVMLLGFILLGRTLEQRARGEAGAALSALVSLKPQTARLVKATPKQEDKMMEVPVGTVQVGQWLKVLPGEKFPVDGEVIKGETTVDESMLTGESMPVRKQPEASVQAGTINLTGAVTLKATQVGKDTTLAKIIATVENAQMRKAPVQQLADQVAGYFAYGVMAIALLTFLFWYSVGTNVWTAVTLETSPLLLSLKLMIAVLVIACPCALGLATPTAILVGTGVGAKQGLLLKGGDVLENVHRLDTLVFDKTGTLTEGKPQVTDYWVVTTPDLQKETLLQFAASVEQGTNHPLAAAIVTEAEKQGVSLLPTADEETKAGFGASATIEQQNVIVGNSQWLEEKGIVIPDSVALSGEKLEATGKTVVYVGINGALAGAIALKDCLRPDAIETVSQLQKMGFRVIVLTGDQARVARAIVHALNLTTDNLIAGVHPEEKAQVIQSLQAQGQRVGMVGDGINDAPALAQADVGIAIAQGTDVALETASIILMRDRVSDVMTAIRLSLATLNKIRQNLFWALGYNVITIPLAAGVLLPKYNLLLSPAMAAALMALSSVIVVTNSLFLKRFRNAEE
>NC_019780.1|WP_015230700.1|3293296_3294331_-|hypothetical-protein
MTTEFNRLRSEVINTQVITRNSGKRLGVVKEMLVDIDRREVVALGLRDNLISVAGMPRYMYLEDITQSGDVILVEDEEVIEDVEIEALSALINCEVITEDGEMLGRVRDFQFNMEDGKVSSLIIASWGYPQIPDQVLSTYELPIEEIVSSGPKRVIVFEGAEERLSQLTVGLLERIGLGKAPWEKDDDDLYYTPPTARPENQLGTGLPERAPERPPIRTEPRETREPIREPAYQEPIPEEEPVYEEAWTEDEWEEPEPLPRREEESVRYQEAVLEEDNWGDSDTPYEEDYQPQPLDRLQQDDEIEEDVWRDEDDTYVPPKVNLPEKPKAKDKEKEPEYEEETGY
>NC_019780.1|WP_015230699.1|3292084_3293176_-|redox-regulated-ATPase-YchF
MLRAGIVGLPNVGKSTLFNALVANAKAEAANFPFCTIEPNVGVVSVPDERLEILAEISKSQRIVPTRIEFVDIAGLVAGASKGEGLGNQFLANIREVDAIVHVVRCFESDDIVHVSGSVDPVRDIEVINLELALADLSQIEKRIARTRKDAKKNKDAQVELELLERLEAAINEGKTVRQVDLNEDEEAIIKPLGLLTKKPIIYATNVSEEDLATGNQAVEKVRNLAEQENASVVVISAQVESELIELSEEEKTDFLDSLGVTEGGLQSLIRATYDLLGLRTYLTTGETETRAWTIRAGMKAPQAAGVIHSDFERGFIRAETISYEKLAEIQSLAAAREKGLIRSEGKEYVVQEGDVIEFRFNV
>NC_019780.1|WP_083874449.1|3308722_3309121_+|class-I-SAM-dependent-methyltransferase
MTFTDAWRTFLAVRVILSKFSNYYSKGKINTILDLGCGDGTLTLKIAQTGAIVHGIDSSRSMIQTAQNRGLSAEVGSGENLKFNQQFDAVFSNAALHWMPNYIAVINGVNRSLKNNGRFVGEFGGQGNKCPQ
>NC_019780.1|WP_015230712.1|3309267_3309471_+|DUF751-family-protein
MQEFFQNVSRYPRYLISFSLGIFFALFERIRPLFNRPVTATALIGILISGFFLVFFTLRGMLGYTTI
>NC_019780.1|WP_015230713.1|3309523_3310732_-|N-acetyltransferase
MMKKPDISSPSQYTVRWQEQIENIPQSQWDELALPLSTPFLEWEWLHNLEKSGSVNPRQGWQPCHLTIWQNRTLVAAAPLYLKGHSYGEFVFDQQWANLAYRLGIEYYPKLLGMTPFTPAVGYRFLIASGEDETLLTEIMVRAIDEFCERQKIMGCHFLFVDPEWKPILEQAGFSSWEHHSYIWENSNLSSFDEYLKQFNANQRRNIKRERKKVEKAGLELKVHTSDDIPHWMFPLIYQFYSRTCNQFFGMSKYLNRKFFQQLYPNYVHRVVVFAAYEEDNTRPVGLSFCLRKGENLYGRYWGCFEEFDCLHFEACYYKPIAWSIEQGIKMFDPGAGGSHKRRRGFPAKANYSLHRFYHQRFSKIFNTYIEEINAMEEAEIEAINQDLPFTKKEIELDPNRV
>NC_019780.1|WP_015230714.1|3312345_3313749_+|DEAD/DEAH-box-helicase
MTISFQSLGLSEERVKQLEKLGFEQPTDVQSQAIPELLKGKDVVGQSQTGTGKTAAFSLPLLEQIDVEDTVVQALILTPTRELAQQVTTAMKTFSHDRALKILTVCGGQPIDRQIQTLKRGVQVVVGTPGRVIDLLNRKALRLNTLRYVVLDEADEMLSMGFIDDVREILKQAPEQRQTACFSATMPRQIQDLINQFMDHPVSLKVEQPKGTPQRIEQRAYKIPRGWTKGKALKPILAVENPESALIFVRTKRTASEITQELQAAGYSADEYHGDLSQSQRERLVQRFRKSQVRLVVATDIAARGLDVQDLSHVINFDLPDNVETYIHRIGRTGRAGKTGVAISLSQPRDQNTIRQIERRLRERLNLVNIPSRAEIEAQRLEKLREELHGSLGGERMASFLPLVRELGDEYDAHAVAAAALQMIYDQSRPQWLDENWQDPPSGSPKPKPRNKRNSKPSVRSTSGDRR
>NC_019780.1|WP_015230715.1|3314033_3315146_+|threonine-synthase
MTTTRVSPVSPTPNRLKEQTGWSGLIETYRPFLPVSATTPVVTLLEGNTPLIPALSISERIGRGVKVYVKYDGLNPTGSFKDRGMTMAISKAKEAGAEAVICASTGNTSAAASAYAVRAGLKPFVLIPDGYVALGKLAQALLYGAEVIAIDGNFDDCFNLVKDIAQEYPVTLVNSVNPYRLEGQKTAAFEVVDQLGEAPDWLCIPVGNAGNISAYWMGFCQYHQQNKCEKLPRMMGFQAIGSAPLVQGYPEKSPDTIATAIRIGNPANWKRALAVQEASQGGFNAVTDEEILDAYRILAREEGVFCEPASAASVAGLLKVQDTVPSNTTIVCVLTGNGLKDPQSAIDHAQAQVKAGVASELDAVAQAMGF
>NC_019780.1|WP_015230716.1|3315186_3316320_+|DUF262-domain-containing-protein
MKHKNQTTATSLQEEIDKTRQEIRTDGYSMSIGEWISLYEHNEIDIHPDFQRFFRWSDHQKSAFIESILLGIPIPPIFVNQREDGVWDVVDGLQRLSTIYQFVGILNPNHQEENTPFTLQETVYLPSLNGKKWNDPDDQENSFTQAQRLYIKRSKIPVNIIQKESDPMIKYELFQRLNTGGSIATPQEMRNCILLMLNQNLYDLMSSLSRRESFRNCIALSDKLYEEQYDLELVLRFILLFDKDNDSLQKLGGDVSVFLTQKMRQMAVENNWNRHHIESAFDTTFNLLNQSMRDESFKRYKSEEDRFLGGFLLSAYEVIALGIGYNYRTLPPVDEIPNRVKSIWSNQIYKQWSGAGQNSTRRLRYLIPLGREKFSPS
>NC_019780.1|WP_041235540.1|3316907_3317177_+|hypothetical-protein
MSTASNLSSETFKGIIEILGIDFSYYSTKSKLIDTQLLKKRNEIAHGNYLELDREEYRDLQAEVIGMLDLFRNQIENAASQEKYKQNLP
>NC_019780.1|WP_015230717.1|3317261_3318386_-|RNA-methyltransferase
MNNYFATVARGLEEIAAQELTTLGGENVTPTFTGVQFQGDQKLLYKVNLWSRLIFRVLVPIKTFPCHNAKQLYGEVQEINWENYLSPESTFMVHCTGKNQQLNHTHFSALQVKNAIADQQTQFFGKRSNVNLENPDLIINLHIEKTQGILSLDSTGESLHRRGYRPAMGIAPLKETLAAALLTMTDWETNLPLLDPMCGSGTFPIEAGLKALNIAPGRLRNQFAFEQWFDFNRELWEQLKQEAKQQKLSQLSVGIYGYDRDFDVLKQAQTNAKNCNLQQQIHWSQIELSAVEPPLDRGIIICNPPYGKRIGDTKALGSLYKQLGDIFKQRFKGWVAYVLSGNKALTKQIGLRTSQRIPVYNGSLPCTLLRYELF
>NC_019780.1|WP_015230718.1|3318621_3319332_-|hypothetical-protein
MSPLTSIICLANSWKHGDRCIAGINPETGRWIRPISDLEDGRIPRSMRLLEGKEPQLLDIIQIPLGKTGNDFGFESENLSVLPGRWKKQGQVTTKEVLRYCSSEPYILHNYKKFVTVPELARKPFALRKTLQLVHVTEFFVEKKQRETGTNQYKATIVSRNGQRLSRLGITDPLFVKKLDQGNEPIVPCLVTVSLSMPHRPPNWEGDDPCWKLIAAVMELETNDYDDQDELLDLPF
>NC_019780.1|WP_015230719.1|3319319_3319760_-|DUF488-domain-containing-protein
MKIKLFTIGFTQKTAQNFFETLAKVGVKKVIDTRINNTSQLSGFAKKNDLQYFLKSLQGINYDHTLSLAPTKELLSQYRKKEISWEDYENKFYQLISDRAIEKQLSPDSLHCSCLLCSEAKPHYCHRRLVAEYLQQKWGNLEICHL

Crispr_ID: NC_019780_47

• CRISPR_ID: NC_019780_47
• CRISPR_location: 3373671-3373750
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_47

Consensus_repeat	Method
GCTTCGCTCCACCCAACCTACACCT	CRISPRCasFinder

spacers of NC_019780_47

>47.1|3373696|30|NC_019780|CRISPRCasFinder
ACACTCAACTTACAATTAATGTTGGGTTTC

CRISPR arrays and Neighbor proteins around NC_019780_47

CRISPR arrays

The CRISPR arrays of NC_019780_47

>merge|NC_019780|47|3373671-3373750|CRISPRCasFinder
GCTTCGCTCCACCCAACCTACACCTACACTCAACTTACAATTAATGTTGGGTTTCGCTTCGCTTCACCCAACCTACACCT

>NC_019780|47|45|3373671-3373750|CRISPRCasFinder
GCTTCGCTCCACCCAACCTACACCT	ACACTCAACTTACAATTAATGTTGGGTTTC
GCTTCGCTTCACCCAACCTACACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230772.1|3378722_3379052_+|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269
NC_019780.1|WP_015230775.1|3380654_3380828_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230763.1|3370850_3371351_+|photosystem-I-reaction-center-protein-subunit-XI	unknown	unknown	gnl|CDD|234817
NC_019780.1|WP_015230759.1|3361153_3361882_+|methanol-dehydrogenase	unknown	unknown	gnl|CDD|224429
NC_019780.1|WP_015230760.1|3361878_3362271_-|DUF4346-domain-containing-protein	unknown	unknown	gnl|CDD|372981
NC_019780.1|WP_015230762.1|3368962_3370393_+|ATP-dependent-DNA-helicase-RecQ	unknown	unknown	gnl|CDD|223588
NC_019780.1|WP_015230767.1|3372873_3373404_+|NAD(P)H-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl|CDD|183557
NC_019780.1|WP_015230771.1|3377597_3377981_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350220
NC_019780.1|WP_015230776.1|3382709_3383603_-|ACP-S-malonyltransferase	unknown	unknown	gnl|CDD|272922
NC_019780.1|WP_015230764.1|3371412_3371529_+|photosystem-I-reaction-center-subunit-VIII	unknown	unknown	gnl|CDD|183355
NC_019780.1|WP_015230769.1|3374541_3377148_-|M1-family-metallopeptidase	unknown	unknown	gnl|CDD|223385
NC_019780.1|WP_156800828.1|3379913_3380180_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235543.1|3370471_3370720_-|hypothetical-protein	unknown	unknown	gnl|CDD|236722
NC_019780.1|WP_041235544.1|3372143_3372872_+|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl|CDD|214337
NC_019780.1|WP_015230774.1|3379428_3379824_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800827.1|3377414_3377621_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230773.1|3379067_3379418_+|hypothetical-protein	unknown	unknown	gnl|CDD|375906
NC_019780.1|WP_015228746.1|3364165_3366067_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_015230768.1|3373819_3374545_-|HAD-family-phosphatase	unknown	unknown	gnl|CDD|223710
NC_019780.1|WP_015230765.1|3371766_3372129_+|NAD(P)H-quinone-oxidoreductase-subunit-3	unknown	unknown	gnl|CDD|176964

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015228746.1|3364165_3366067_+|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	2.8e-50	165.6	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230772.1|3378722_3379052_+|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	2.93447e-06
NC_019780.1|WP_015230763.1|3370850_3371351_+|photosystem-I-reaction-center-protein-subunit-XI	gnl|CDD|234817	PRK00704, PRK00704, photosystem I reaction center protein subunit XI; Provisional.	1.66709e-78
NC_019780.1|WP_015230759.1|3361153_3361882_+|methanol-dehydrogenase	gnl|CDD|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	9.69318e-39
NC_019780.1|WP_015230760.1|3361878_3362271_-|DUF4346-domain-containing-protein	gnl|CDD|372981	pfam14251, DUF4346, Domain of unknown function (DUF4346). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 127 and 502 amino acids in length. There are two conserved sequence motifs: LDP and DHA. Many members of this family have been annotated as dihydropteroate synthases, however no experimental evidence can be found for this and MJ0107 has been shown not to possess dihydropteroate synthase activity.	8.31533e-74
NC_019780.1|WP_015230762.1|3368962_3370393_+|ATP-dependent-DNA-helicase-RecQ	gnl|CDD|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	1.97148e-139
NC_019780.1|WP_015230767.1|3372873_3373404_+|NAD(P)H-quinone-oxidoreductase-subunit-J	gnl|CDD|183557	PRK12494, PRK12494, NAD(P)H-quinone oxidoreductase subunit J.	1.36847e-116
NC_019780.1|WP_015230771.1|3377597_3377981_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350220	cd09872, PIN_Sll0205-like, VapC-like PIN domain of Sll0205 protein and homologs. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of the Synechocystis sp. (strain PCC 6803) Sll0205 protein and other uncharacterized homologs are included in this subfamily. They are similar to the PIN domains of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.71282e-49
NC_019780.1|WP_015230776.1|3382709_3383603_-|ACP-S-malonyltransferase	gnl|CDD|272922	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase. This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.38882e-112
NC_019780.1|WP_015230764.1|3371412_3371529_+|photosystem-I-reaction-center-subunit-VIII	gnl|CDD|183355	PRK11877, psaI, photosystem I reaction center subunit VIII; Reviewed.	8.07157e-11
NC_019780.1|WP_015230769.1|3374541_3377148_-|M1-family-metallopeptidase	gnl|CDD|223385	COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism].	2.0251e-162
NC_019780.1|WP_041235543.1|3370471_3370720_-|hypothetical-protein	gnl|CDD|236722	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional.	0.00167193
NC_019780.1|WP_041235544.1|3372143_3372872_+|NADH-quinone-oxidoreductase-subunit-B	gnl|CDD|214337	CHL00023, ndhK, NADH dehydrogenase subunit K.	4.83285e-128
NC_019780.1|WP_015230773.1|3379067_3379418_+|hypothetical-protein	gnl|CDD|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	3.57026e-11
NC_019780.1|WP_015228746.1|3364165_3366067_+|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	7.71015e-124
NC_019780.1|WP_015230768.1|3373819_3374545_-|HAD-family-phosphatase	gnl|CDD|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.6432e-47
NC_019780.1|WP_015230765.1|3371766_3372129_+|NAD(P)H-quinone-oxidoreductase-subunit-3	gnl|CDD|176964	CHL00022, ndhC, NADH dehydrogenase subunit 3.	1.51076e-66

Protein sequences

>NC_019780.1|WP_015230767.1|3372873_3373404_+|NAD(P)H-quinone-oxidoreductase-subunit-J
MATEETQNQNEQEASQLVEAGAVSSWLTENNLDNQPLPLDHRGVEIIRVEADALLPVATALYQNGFNYLQCQGGYDAGPGKELVSFYHLAKVSDDAASTEEVRIKVFLPRDNPRVPSVYWIWKAADWQERETYDMYGIVFDGHPNLKRMLMNEDWVGWPLRKDYVSPEFYEIQHAY
>NC_019780.1|WP_041235544.1|3372143_3372872_+|NADH-quinone-oxidoreductase-subunit-B
MNQGTLEQQQKEKIINPATRTGVTQDLSENVILTTVDDLYNWSRLSSLWPMMYGTACCFIEFAALIGSRFDFDRFGLLPRCSPRQADLIITSGTITMKMAPALVRLYEEMPAPKYVIAMGACTITGGMFSVDSPTAVRGVDKLIPVDAYIPGCPPRPEAIIDAIIKLRKKIANESIQERSGFIEQTHRYYSTTHNMKVVSPIHDGQYLSKGTWEAPPKELAEAMEAPISQALSESQTEKEEA
>NC_019780.1|WP_015230765.1|3371766_3372129_+|NAD(P)H-quinone-oxidoreductase-subunit-3
MFALTGYEYFLGFLLICSLIPVIALTAAKLLRPSSGGPETRTSYESGMEPIGGAWIQFNIRYYMFALVFVVFDVETVFLYPWAVAFNELGLLAFVEALIFIAILVVALVYAWRKGALEWS
>NC_019780.1|WP_015230764.1|3371412_3371529_+|photosystem-I-reaction-center-subunit-VIII
MTGEYAASFLPLILVPAVGLLMPAVVMGLLFIYIESEA
>NC_019780.1|WP_015230763.1|3370850_3371351_+|photosystem-I-reaction-center-protein-subunit-XI
MAENMQYIQPYNDDVYVGHLSTPISDSGFTRAFINNLPAYREGVSPLLRGLEIGMAHGYFLVGPWTLLGPLRDSEGSAYLGGLIAAIGLILIATGALSAYGLTAFPNNDSKALYFEDRAPENLKTREGWSQFTGGFFVGAMGGAFVAYFLLENFSVVDSMLRGIVN
>NC_019780.1|WP_041235543.1|3370471_3370720_-|hypothetical-protein
MQGRQGRQGRQGRQGSNGSNGSNGSNGSNGSNGSNGSNGSNGSNGRQGSNGRQGSDFSSPSPPSPPSPPSPPSPPSSSSNDE
>NC_019780.1|WP_015230762.1|3368962_3370393_+|ATP-dependent-DNA-helicase-RecQ
MDWEQVRDRLQTVWGYPDFRPPQGEIVRCLLEKKDVLVVLPTGGGKSICFQLPALLQTGLTLVVSPLVALMENQVQDLKQRGLPAASFHSEIDRRQRKEILKQLESQALRLLYLSPESLLSPHIWERLIAPELMINGLMLDEAHCLVQWGETFRPAYRRLGVVRETLLQFKPQGSQISIAAFTATADLEACQTIETALKLQTPTYFKESPYRQNLQLQVKRVCTPAQRKQNLLSFIQQRKQQSGLIYARSRSVTETLSQWLNNKGYKSEPYHAGLSAGERRSIEEKWLEGRRQFVIATCAFGMGINKPDLRWVVHYQPPLLLSEYLQEVGRGGRDGNRATALTLVSEPTGLLYPEDKQREQYFIRQLRQQYQKARELMKRIPTEGKVATVEEISPHGAIVLALLHGCGQLEWLDPFHYRLLSRKQTPVNLSKILKPPQQMNQFLSTRECRWRFLLEAFGFTSQGFRCGNCDRCLRQ
>NC_019780.1|WP_015228746.1|3364165_3366067_+|group-II-intron-reverse-transcriptase/maturase
MNQIRYKCDARTKTFLMLWLGFGFNLMAETEWSQIDWKEVEIRVFKLQKRIYRASQSGDVAKVHKLQRLLLRSWCAKLLAVRRISQDNQGKNTAGIDGVKSLSPKQRLSLAENLTLTGKGKSLRRVWIPKPGRKEKRGLGIPVMEDRARQALLKLALEPEWEAKFEPNSYGFRPGRSCHDACGAIYSAIKQKSKWVLDADISKCFDRINHNVLLQKLNTTPTMARQIRAWLKSGVLDRGDWFPTNEGTPQGGVISPLLANIALHGLEEYIKQWTETWKGKKQTNIKSISLIRYADDFVVLHKDKSIIQQAKTLIEQWLHGLGLEISESKTRICHTLHDTEETKAGFDFLGWNVRQYKVGKRHSGKNTNGNLLGFKTIIKPSDKSIKTHYEKIVEVLDSMKGKSQEVIIDKLNPIIMGWCNYHKTVCSKETFQHIDNSVYNKLRRWTKRRHPNKTLKWCEERYFHLTKEKNLDGEKRNAKWVFSTPSDVPNSPVAGTHELWKHAWTPIERHIKIEGTRSPYDGDWRYWSKRRGEYPGTPKRVATLMKRQKGKCTRCGLYFKDGDVEEVDHIIPKAEGGRDDYKNLQLLHRHCHHQKTAEDRQRQMDNKGQKKTQKKTKKGRKSETKQGSAVNTA
>NC_019780.1|WP_015230760.1|3361878_3362271_-|DUF4346-domain-containing-protein
MTQVNLTTNLSAIDNELSKRHINLDPGGYFIIYLDRAEGLICAKHYNNLVDEQGFALHPITGERLSAKCNDANQVATTIYTGRTAKELCVKLFEETEPCPVTQANHAAYLGRELMRAEIALIQGSEYVQD
>NC_019780.1|WP_015230759.1|3361153_3361882_+|methanol-dehydrogenase
MSQLLKQIVIKLNSYQQLLLLLFIPCFMFVMTAFPVHAATSPRDLPNISEEESVYVVDQAEVISRSNEGKLNKILQDIAENTNADIKLAVIRRLNYGETVDSFADELFSQWYPTAADKQDKVLLVFDTITNNATIRVSESLKDRLPEEIATSVVEDTIGVPIREDNKYNRAFLDASDRLGMVLAGKPDPGPPEVQDDIRVEGTFTKAEDTDTQNSTIWVVGLLIVATVIPMATYFAYVLLTN
>NC_019780.1|WP_015230768.1|3373819_3374545_-|HAD-family-phosphatase
MSLKAVLFDFNGVIIKDESIHKELIEEILLGENLRPDAEEHNQLCLGRTDRACLSAILERRGRVVTEEYLDKLLRQKAQKYQDYLEAKEQLPIYRGVEAFIRDLWGAGLVIALVTGARRENVEYVLDRMKIKEAFAVIVTSDEITNSKPDPEGYLTAVERLNELYSDLNLTPEQCLVIEDTPSGIEAAKQAKMQVVGVANTYPFHMMQRQANWTVDYLQELELERIKQQFADVKMVDRTGN
>NC_019780.1|WP_015230769.1|3374541_3377148_-|M1-family-metallopeptidase
MKYSYFLFDTEDNKRKSFILPGAKPHYTPDRPGNVQHIFLDLTLDIPNQCFRGSSTITLKPVQQGLTQLTLDAEDLTIETVKINQVSQPFHYDGKQLQIQLLQPTTFNPIDLVIHYSVDHPSRGLYFIQPDSDYPDKPTQVWTQGEDEDSRFWFPCFDYPGQLATSEIRVTVAKPYVAISNGELVNTEDQGENTVYHWRQNQVHPTYLMTLAVGDFAKIEDKWNDVPVEYYVEKGREADAKRTMGKTPQMIEFFSQQFGYAYPYPKYAQVCVADFIFGGMENTSTTLLTDRCLLDERATLDHTRAESLVAHELAHQWFGDLLVIKHWSHAWIKEGMASYSEVLWTENEYGKDDAAYYILNEARSYLSEDSSRYRRPIVTNVYREAIELYDRHLYEKGACIYHLIRGQLGEEGFKQAIHNFVQRNAHHTVETVDLLRAIDEATGRNLAPLFDQYVFRGGHPDFKINYSWDATNQLAKLTVTQTQGKTDKDVTENDLFDLTIPVAFGYVSEAEEVCFEYLSLHLHEKEHSFYFPLPQQPQFISFDQGNYHLKTVTLEYPVSELKTQLKFDPDVTSRIYAAEALGKKGGLEVIKALSERLSNDPFWGVRVEVAKQLGKIKLNQAIPELIKGLQDENPKVRRSILEGLGNFKTEESYQAIKQVAQQGDESYYTEATAFRVLGKMATGSLKEKETEVIALFREGLENRSGWNEVVRGGIIGGLSQMKTSETAMTMILPYTDSGVPQSLRLSAIRALGTVSRGQESAQVETILEQLDALSGESFFLTQVSVVNALKQMQTSTAISILQTLAAQTPDGRVRRMAEEAVKTVQEKLGSEKGMKELREEFDQLKKENQDLISRLAKLEALQTEDEEK
>NC_019780.1|WP_156800827.1|3377414_3377621_-|hypothetical-protein
MCIQQNPHLPSNPLSKSSGKGASKSSGTVNSPAHKPKGRNDLLLAMGLISAIGCSDLIIIRVSPASTC
>NC_019780.1|WP_015230771.1|3377597_3377981_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MRILLDTHIFLWFISGDTRLLSDLRDAIRDQENEVYLSSVSIWEAIVKYQLGKLPLPEHPESYLPKQRDLHQISSLALDESSVLQLAKLPLLHRDPFDRMLICQTLQNGLTIATVDVAIRAYSVSVI
>NC_019780.1|WP_015230772.1|3378722_3379052_+|DUF433-domain-containing-protein
MSQIEIHSITLPLKVDEAGGIRVGQTRVTLDSLLVAYQSGSTPEEIAVQYPTLTLAEIYAGITYYLTHPQQVEEYLDQRRHQAEHRRQQIARDNNLVGLRQRLLDRRQS
>NC_019780.1|WP_015230773.1|3379067_3379418_+|hypothetical-protein
MRLLTDENFNGTISRGLIRRLPDLDLVRVQDVGLMNADDLTILEWAAREQRILLTHDVATITMYAYDRVNKGLTMPGVVEVIATASIKRILDDLELFVLCSLPEEYDSRILFIPFP
>NC_019780.1|WP_015230774.1|3379428_3379824_-|hypothetical-protein
MKLDSFSVTATLTLATMGVISFPQAAASQLTPQGWGAVGVEDSDVSYSLGVRWFDFGVELGGREDGATGVDVLKFVSFPLLSPYVGVGLYSDAEDDVAISGGLQVRPPGNVFVGVGYHSVRGVNGQLGIKF
>NC_019780.1|WP_156800828.1|3379913_3380180_+|hypothetical-protein
MGGEDETQHQYSLFVIRYSLFVICSLLTGHWETFHTSTSSVTGTSLHWSLITDYCLLITDHWSLVTAMGGGNETQHSLPIICNSVKSY
>NC_019780.1|WP_015230775.1|3380654_3380828_+|hypothetical-protein
MLHIVGFALPTLPSTLSPPTPQVWQGCFILGVKIESDRLKPLRGGAIAPISSNLAFS
>NC_019780.1|WP_015230776.1|3382709_3383603_-|ACP-S-malonyltransferase
MSKLAFVFPGQGSQTVGMDTDLGETTLGKERFQQAETILGWSVLEVCHQEEEQLSRTLYTQPCLYVVESILIDLLLEEGRQFPQYVAGHSLGEYSALYAARVFGFEAGLRLVQQRAKLMETAAGGKMVALMKFDRTQLDEALAQDSDVVLANDNSPQQVVISGTPEAVDAVLAEVKTKRAIPLNVSGAFHSPLMAGVAQDFKQLLDEVNFGDAIVPVLSNVDPTPTTDATTLKSRLMEQMTGTVRWREILLKLASEGVSELKEIGPGNVLTGLCKRTCPEIALHNISRAVECTEPID

Crispr_ID: NC_019780_48

• CRISPR_ID: NC_019780_48
• CRISPR_location: 3465237-3465309
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: RT

Consensus repeat of NC_019780_48

Consensus_repeat	Method
CATCTTGCCTAAGGCAACTTGCCT	CRISPRCasFinder

spacers of NC_019780_48

>48.1|3465261|25|NC_019780|CRISPRCasFinder
AAGGCAACTTGCCTCTTGCCTAAGG

CRISPR arrays and Neighbor proteins around NC_019780_48

CRISPR arrays

The CRISPR arrays of NC_019780_48

>merge|NC_019780|48|3465237-3465309|CRISPRCasFinder
CATCTTGCCTAAGGCAACTTGCCTAAGGCAACTTGCCTCTTGCCTAAGGCAACTTGCCTAAGGCAACTTGCCT

>NC_019780|48|46|3465237-3465309|CRISPRCasFinder
CATCTTGCCTAAGGCAACTTGCCT	AAGGCAACTTGCCTCTTGCCTAAGG
CAACTTGCCTAAGGCAACTTGCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_156800830.1|3456831_3456975_-|AraC-family-transcriptional-regulator	unknown	unknown	unknown
NC_019780.1|WP_015230848.1|3472696_3474223_-|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl|CDD|380318
NC_019780.1|WP_015230849.1|3474312_3474993_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230837.1|3459013_3460030_-|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl|CDD|378355
NC_019780.1|WP_015230839.1|3460975_3462853_-|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl|CDD|236014
NC_019780.1|WP_015230835.1|3457064_3458495_+|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl|CDD|235798
NC_019780.1|WP_015229728.1|3470200_3471865_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|275209
NC_019780.1|WP_156800831.1|3465024_3465180_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230836.1|3458813_3459005_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230852.1|3477353_3478973_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|350799
NC_019780.1|WP_156800905.1|3460157_3460748_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230845.1|3469178_3469664_+|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl|CDD|350254
NC_019780.1|WP_015230840.1|3462925_3463435_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230834.1|3455484_3456633_-|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl|CDD|224331
NC_019780.1|WP_015230843.1|3465476_3468062_-|TIGR03960-family-B12-binding-radical-SAM-protein	unknown	unknown	gnl|CDD|188475
NC_019780.1|WP_015230851.1|3475772_3477344_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|379293
NC_019780.1|WP_015230850.1|3475077_3475776_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230844.1|3468246_3468819_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230841.1|3463442_3463769_-|YbjQ-family-protein	unknown	unknown	gnl|CDD|376657
NC_019780.1|WP_156800832.1|3468948_3469143_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NC_019780.1|WP_015229728.1|3470200_3471865_-|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	7.1e-54	177.3	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230852.1|3477353_3478973_-|AAA-family-ATPase	gnl|CDD|350799	cd18041, DEXXQc_DNA2, DEXXQ-box helicase domain of DNA2. DNA2 (DNA Replication Helicase/Nuclease 2) possesses different enzymatic activities, such as single-stranded DNA (ssDNA)-dependent ATPase, 5-3 helicase, and endonuclease activities, and is involved in DNA replication and DNA repair in the nucleus and mitochondrion. It is involved in Okazaki fragment processing by cleaving long flaps that escape FEN1: flaps that are longer than 27 nucleotides are coated by replication protein A complex (RPA), leading to recruit DNA2 which cleaves the flap until it is too short to bind RPA and becomes a substrate for FEN1. It is also involved in 5-end resection of DNA during double-strand break (DSB) repair; it is recruited by BLM and mediates the cleavage of 5-ssDNA, while the 3-ssDNA cleavage is prevented by the presence of RPA. DNA2 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.17364e-32
NC_019780.1|WP_015230848.1|3472696_3474223_-|SagB/ThcOx-family-dehydrogenase	gnl|CDD|380318	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC. This family is the oxidase domain of NRPS (non-ribosomal peptide synthetase) and other systems that modify polypeptides by cyclizing a thioester to form a ring. These include EpoB, part of the epothilone biosynthesis pathway; TubD, part of the tubulysin biosynthesis pathway, MtsD, part of the myxothiozol biosynthesis pathway; IndC, part of the indigoidine biosynthesis pathway and TfxB, part of the trifitoxin processing pathway. All are FMN-dependent and oxidize the product of the cyclization of thioesters in short polypeptides.	5.18195e-49
NC_019780.1|WP_015230845.1|3469178_3469664_+|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl|CDD|350254	cd18687, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains into distinct groups; this subgroup includes some sequences belonging to one of these, PIN_3.	1.48207e-52
NC_019780.1|WP_015230843.1|3465476_3468062_-|TIGR03960-family-B12-binding-radical-SAM-protein	gnl|CDD|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	0
NC_019780.1|WP_015230837.1|3459013_3460030_-|L-histidine-N(alpha)-methyltransferase	gnl|CDD|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	4.03844e-166
NC_019780.1|WP_015230834.1|3455484_3456633_-|HEAT-repeat-domain-containing-protein	gnl|CDD|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	4.10541e-19
NC_019780.1|WP_015230835.1|3457064_3458495_+|dihydrolipoyl-dehydrogenase	gnl|CDD|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NC_019780.1|WP_015230839.1|3460975_3462853_-|biosynthetic-type-acetolactate-synthase-large-subunit	gnl|CDD|236014	PRK07418, PRK07418, acetolactate synthase large subunit.	0
NC_019780.1|WP_015229728.1|3470200_3471865_-|group-II-intron-reverse-transcriptase/maturase	gnl|CDD|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.60178e-138
NC_019780.1|WP_015230841.1|3463442_3463769_-|YbjQ-family-protein	gnl|CDD|376657	pfam01906, YbjQ_1, Putative heavy-metal-binding. From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerizes as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.	3.64454e-38
NC_019780.1|WP_015230851.1|3475772_3477344_-|AAA-family-ATPase	gnl|CDD|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	7.3463e-58

Protein sequences

>NC_019780.1|WP_156800831.1|3465024_3465180_-|hypothetical-protein
MSPLSPISPISPISPISPISPLSPLSPLHLFEGLRTLKPHWVRVSVLFRKP
>NC_019780.1|WP_015230841.1|3463442_3463769_-|YbjQ-family-protein
MLTTTTDSLQGQTIEEYLGIVTAEVVYGSNALRDFFAGFRDFFGGRTGSYEKLFTKGQQEAVEELAERAENLGADAVIAIKVDTGTINVDEEGALLVITATGTAVKLG
>NC_019780.1|WP_015230840.1|3462925_3463435_-|hypothetical-protein
MIIICPGFHSPQLTEDFITNLGWRNRADYLIIPRSIEPYNFPKLQQWLSQENLDHTPLFFIGFSAGVVGAMATALTWQGNTQGLIAIDGWGVPLAGSFPLYRISHDTFTHLTSAVLGKGQQNFYGSPAVSHLSLWQNPHLAWGWWEIKLGCQVRCSVAKMINEIVTQLY
>NC_019780.1|WP_015230839.1|3460975_3462853_-|biosynthetic-type-acetolactate-synthase-large-subunit
MGYPNQTKPTLNHPETETIETVQRCTGAFALMDSLKRHGVEHIFGYPGGAILPIYDELHRSEARGDVKHILVRHEQAAAHAADGYARATGKVGVCFATSGPGATNLVTGLATAHMDSIPMVAITGQVARPAIGTDAFQETDIFGITLPIVKHSYVVRQASDMARIVAEAFHIANTGRPGPVLIDIPKDVGFEECDYVPVPPGQVNIPGFRPTQKGNIRALSQAIKLIETSERPLLYVGGGAITSGAHEEIKQLAEHFQIPVTTTLMGLGAFDENHPLSVSMLGMHGTAYANYAVSECDLLIAVGARFDDRVTGKLDEFASHAKVIHIDIDPAEVGKNRAPDAAVVGDVRTCLQQMLDRVVELQIPQNLDRTKSWLKRINRWREVYPLVVPRYEDSISPQEVILEVGQQAPYAYYTTDVGQHQMWAAQFIQYGPRRWISSSGLGTMGYGLPAAMGVKTAVGEEQVICISGDASFQMNLQELGTLAQYGINVKTVLINNGWQGMVRQWQQTFFQERYSASNMQVGMPDFVKLCEAYGIKGMVVRDRAELATAITEMLNYDGPVLLDAQVKKDENCYPMVAPGKSNAQMLGLPDIKQLDQAVEVIYCSNCRAKNPVTNKFCPDCGTKL
>NC_019780.1|WP_156800905.1|3460157_3460748_+|hypothetical-protein
MSDRDCIQTMIDPARSSPASETVVTALVNLEKANKKTTEPISYDQLLGKWRLWWITGTKKTRQRSGIILGSGRYLPQWLKITLSYSKNSDFTLTDAEAGNVENSVSFAGINLTLTGSTKFFPKQKILAFDFTELTIKCFGKIIYSGNIRKGKASRETFYQEPIKKQAFFRYFLMEEDCIAARGRGGGLALWKRLEP
>NC_019780.1|WP_015230837.1|3459013_3460030_-|L-histidine-N(alpha)-methyltransferase
MSISLSTPNKRLNIQDLRDPDRSNLTNDGSDVIIGLTQEQKTIPCHYLYDDRGSEIFEQICELPEYYPTRTEAQILRDNGSAIAQTTGNCELIELGSGSSTKTRLLFDAYQSLGHALYYIPIDVSAGMLELSAKQLLNDYPHLTINGLVGTYEQALQQLPPSPLSKRMVFFLGSSLGNFAPKQCQEIFQEVKKALNPGDYFLLGLDLQKSKAILEPAYNDRQGVTAEFNYNLLDHLNRRFQGNFKRQNFQHWTFYNTELGQIETYLRSTQPQTVQLKALDLTVEFEEGETIRTEISRKFQRQEMEQQLDQEGLKPLKTWTDAEDWFALLLCEVKSASV
>NC_019780.1|WP_015230836.1|3458813_3459005_+|hypothetical-protein
MDSSSGLSSRSSAPKHDRNQWASLIGGAIALITLTLPPLIITHYSANNALDTLLEVSTEKPSD
>NC_019780.1|WP_015230835.1|3457064_3458495_+|dihydrolipoyl-dehydrogenase
MAEFDYDLIILGAGVGGHGAALHAVKRGLKTAIIEAKDMGGTCVNRGCVPSKALLAASGRVRELQDSHHLNSLGINVGNVNFDRAAISNHAQNLVEKIRGDMSNSLDRLKVDTINGWGKVTAPQKVSVLTEDGEKTITGEHIILSPGSTPFVPPGIQVDGKTVYTSDDALKLSSIPDWVAIIGSGYIGLEFSDIYSALGSEITMIEALDNLMPGFDRDIAKIAERVLIKPRDIETYTSTLAKSVKPGSPVVIELADAKTKEVTEVLEVDAALVATGRIPATKNIGLDSIGVETDKRGFIPTNDQLQVTVNGEPVSNLWAIGDATGKMMLAHTASAQGISAVENICGDDHVVNYRAIPAAAFTHPEISYVGLTEDAAKALGKEEGFKVKSVRTYFKANSKALAEGEEDGVAKIIYRQDTGELLGAHIIGMHASDLIQEAANAIASRQPVQNLAFNVHTHPTLSEVLDEAFKRAEVKA
>NC_019780.1|WP_156800830.1|3456831_3456975_-|AraC-family-transcriptional-regulator
MEFTKPNTNQQEARGKRQEAKGKRQEARGKRQKARGKRQKARGKRQE
>NC_019780.1|WP_015230834.1|3455484_3456633_-|HEAT-repeat-domain-containing-protein
MKLDQHYLQQLPLSPDGKGFIDLPPDEKEEAFNQVWEAFITGEFQERWEVAKYIPKFGERAIEPLTILLQDETADLDLRCEAASLLSQFQQPHAIFSLTEVLNTDTELEVITACANGLAKSGKMVIPILNEALNHSESRLAAVQALTALRDPEIITPLLSVLDDEQAVIRSRAIEALSRFRDHRIIPTLIQALSDTNAKVRQEAVIGLGVRGNDHHPDEVVKALIPLLYDFNLDVCSHCAIALGRLATSQAITALQQCLESSVTPLPLQKQIIRAISHRETEETLSPLISNLQKQSSTLQEEIITIFGRWQNNQHKKTIVDTLLKFFRENPSAQTDNRLKQTLAQALGNLGIPKGKNLLWEFCQDESSIVQLHAQAALKKIP
>NC_019780.1|WP_015230843.1|3465476_3468062_-|TIGR03960-family-B12-binding-radical-SAM-protein
MTATVEQLITPEINRPARYLGNEQGTKHKPWDSAIVRWVLTYPEIYEVGASNLGHVILYNVLNAQPRQLCDRAYLPAPDLATKLRETNTPLFALENRRSVTDFDILGFSLSYELGATNILEMLDLAHIPLTWQERENGDYPLIFAGGQTATSNPEPYADFFDFIALGDGEELLPEVGLILEEGKKEGLSKQELLLDLAQVPGVYVPRFYDMNADGSVHPNRDDVPERIIRRVARPMPAYSIGLVPYVETVHDRLSVEIRRGCTRGCRFCQPGMLTRPAHDVEPEQVVETIEKGIRETGYNEFSLLSLSCSDYLSLPAVGMEVKNRLQDENISLSLPSQRVDRFDENIANIIGGTRKSGLTFAPEAGTQRMRDVVNKGLTNEELLRGVKTAFEQGWDKVKLYFMIGLPGETDADVIGIAETIRWLRQECRLKGRKRLDFNVTISNFTPKPHTPFQWHSVSTAEFIRKQELLREEFRRMKGVKVNDTDVRISAMEDFVGRGDRRLAPVVRRAWELGAGMDAWWESLEKAFNAWETAIADAGLDWKYRQVEKGEWDWETMAQGTENDRLDAPLPWDHIDTGIDKNWLQEDLQRALDAATVPDCSYAGCSHCGVCGIDFGHNIVVKPPEIPKFEGHFQPDQTRDQRIRVRFSKEGEMRLVSHLDLVRLFDRAIRRAKLPIAFTGGYHPGPRISIANALSLGMSSSGEIVDFDLTETLDLEEFRDRLSEQLPEGITINSVETVSLKNSATSLLEKAEYFVTVEAQTTVSETQWKAALQTILDREEILWEKTTKSGKKKTLNLRDRVFELSLVEQLDEHTAKLRYLGSCRNDGTLLNPEHFVYMLEQVTGLDLQLSHAHRQELILQS
>NC_019780.1|WP_015230844.1|3468246_3468819_-|hypothetical-protein
MIRNGQPYLPIHYMHSPLLTNSRQSAINIIQRNSALINPFKEGDYLTPAGLHVLIEKLCIENPKKAIGYRAAIAIISSELANNPNLIVATLQGAANKQESVHKTMREIQNDAKYCLLSNVEFNKNNPCDIHHIEGQSEAPEFADDPKNLIPLTSTIHRAYHSWVNENELDISRATLKFFAKISGYRTDLI
>NC_019780.1|WP_156800832.1|3468948_3469143_-|hypothetical-protein
MYQRISARSLLLPKHLIAPSLSFPFIQIRDRALLPKTLDRALPFLSVYSLQKTATTLNLLYDFT
>NC_019780.1|WP_015230845.1|3469178_3469664_+|type-II-toxin-antitoxin-system-VapC-family-toxin
MSESVYIETSILGHLTARPTDNLILAANMKVTQDWWNEHRHSFTLYASEIVADEATKGDATIAAKRLELLQPLMFLQLTEEAFELSQAFLKQSNLPEKALIDSLHMALATIYGLNYLLTWNCKHMANAQLQRKLSEISWKLGYVLPVICTPYELIGYNSEF
>NC_019780.1|WP_015229728.1|3470200_3471865_-|group-II-intron-reverse-transcriptase/maturase
MSSITLTNGLRGEISDWGQINWRKVKKSVRNLRMRIFRARSLGQWKQLRRLQKLLLRSRANLLLSVRQITQINQGKRTAGVDKEVLNTPDERVKLVNSWEMPKANPTRRVYLPKPNGKKRPLGIPTVRDRVAQAMVKNILEPEWEAVFEPNSYGFRCGRSCHDAIAQCWIRLNSSPSGGHLWVLDADIKGFFDNIAHEAILTAIESVPRGDLIEGWLKAGYLDKGVLNPTDMGTPQGGVISPLLANIGLHGLEDFIKSVNPKLGVIRYADDFVVTSKDKESLEHILDQIKQWMSERGLEISAEKTRIVSMEEGFDFLGFNLRHYDGKLLIKPQKKKVLAFCKKIGETLNKMKACTQEDVIKVLNPLLRGFANYYRGVVSKETFSYIENRVWHYLYKWALRRHPNKSKTWVFNRYFNRIRGRNRFACYCTGRGGKEKFFMLYDISSTPIIRHVKVKGTASPDNPSLRDYWQKRNLKIGKQKWAKGSKYEQVAKMQEHKCPVCGESLYNGEEIETHHIIPVKDGGSDDTENLIHLHKACHKQVHSSKTKTKVGSKA
>NC_019780.1|WP_015230848.1|3472696_3474223_-|SagB/ThcOx-family-dehydrogenase
MAEWKPTLAQHYHERTKYDPETIAQKARSLDWDKQPLPYKDYKLGTTYDLKPYLNNAPTDEENWEKWHRLSRFLLLSYGVTAKLQTPSGDQILLRAAPSAGGLYPAEVYLIVRGLSFLPEGLYNYQCKTHSLIHFWEDSVWPSLKTACFWDSTLENTELAIAVSAIFYRSAWRYEDRAYRRIFLDTGHLLGNLELAGSLTDYRPHLIGGFNDDKMNELLYLNPQEEGVITVAGLADILEIKQNLPPTTTALPSKANHHFSANIPDGNLLSHLHELTKIETEPNLSSKKRKEAERKDKYNFPFCLKVSTETQPIFWGEQLEGLQETILKRRSTRGFNGEEITLDELKKLLSFTYQPQDYWRQSLDSTPDFFDLNLVSTFVAVSGVTDLEEGCYYYAPSSQELRQIRFKNFRRELHYLCLGQDLGRDAAAVIFQTADLQQAITLYGDRAYRYLHLDAGHLGQRLNLVAIYLKLGVSGIAGFFDNQVNEVLGIPEDEAALYITTLGRPRRG
>NC_019780.1|WP_015230849.1|3474312_3474993_+|hypothetical-protein
MFQLKNVVPWGRSFQDYIEMFNLTPEDLELSILDCAGGPASFNAIMKQREKTVISCDPIYQFTPQQIEKRIDETYPIIIDGLYKNIDQFVWEKTPTPEALGEDRLSAMKEFLADFATGKQEGRYREIGFPELPFSDQHFDLAVSSHLLFTYSEQFSWEFHLQSILELSRVAKEVRIFPLVENFTSIKSRHLDSILEALTTGGYETEIQKTVYEFQRGGNELLKVIG
>NC_019780.1|WP_015230850.1|3475077_3475776_-|hypothetical-protein
MKLYYQLVSVQDIQSSLSASQFSTEEIEQAANLFLKAELSIQPVVLRQNGLESYSVIYGDFVYFAAVRAREINPRKAETIQAVVIDPEHESALVEQVELFKRDSDFSTQSDDLVGRFNNFEQTIEQRIYDLIQTVTEENKALKSSIGTVEKQIPKRHNLLELFNDSSSQEEKRLRDRLEKAGIQTKRYNIIEQIRNKQPFNSLEEIPQQIRGLSSEKMLKLIENWLNTLELT
>NC_019780.1|WP_015230851.1|3475772_3477344_-|AAA-family-ATPase
MKRSIFETLFEHAPGTMLDITYRMNDEINRFPSDYFYEGKLQPSQLASQRRFPLNHSSQRFPKVLDPETPAVFLEINHQGKKARSYPEAKAIADIITEAVECGISPQEIAVIAPYRAQVRLIRTELKKDTNHPELTEIQVNTVESMQGQQREMIIVSLTTSDPEHATQRAEFYFQLNRLNVAITRAKTKRIVVGSPHLFDANPQREDLQGGVESFRQFYQNSVIIKDEPIQKSSKPKPEKTMKTIAIYHNKGGVGKTTVAVNLAAAFAKRGNRVLLIDLDSQANTTYATGLVKFDDESNDNLKELNILQVLESKEFNSIPEVARKGSYCDPTVDIIPSHISLMKAENELKNSSFSPFVLAKKIQAVKDKYDIVIIDTPPALNLYAKIALIAADHLIIPSDLKPFANQGLTNVQELIQEVNNFREMTNLSPLNVIGVLPTKISTVATFIKYTFPKRKDKINDRYHLKVLESAIFERADLANCSELVIETEEDSIPDPKSVLDYAPNSKSSQEFNQLVDELLKLI
>NC_019780.1|WP_015230852.1|3477353_3478973_-|AAA-family-ATPase
MSNYPIIFRPQQRQSIALPLPSSEERIVTANPAEDHFFWYYLSPYFGNQIDHNKQFKSYTPDFVYIDPAANLYIDIECDEPYVYDTGEATHYIGKDRQRDRAFTENGWFVLRFAEEQIITSPESCCLIIAKLIARYSSNKSVLNQFPDTQKIRKIPFWTKSQAEEMAREKQRDRYLNQNEINQEIKAVSETTLLNSLEGFINTETDSQIRETKQIWRKPLAERIEDGYAISGLQIIQYTGNKITLRYSGENLSKFSAGNPLRLSLNQPFDPNNSYACILEEETGNDLILRAGYQTIFPDLDTSRQDWVLDQDSIDVRRYLIAALAEIKESPPIQDKILNILQGKTLPDIPTTNYQQSWEFITDLKLGLSDKQKEALVSAIATQNYYLIQGPPGTGKTRLLAHLATILARHHKRVLVTAFTHTAINNALRTIKETTGYSHIFKVGGEDKTTGLTWEGGEIKNYEYFNNSPYTAESKGLIIGGTCFALRTNRLKGIDFDTVIFDEAGQITLPIALSGMLAGKRHIFIGDHKQMSPVITAKH

Crispr_ID: NC_019780_49

• CRISPR_ID: NC_019780_49
• CRISPR_location: 3607419-3607528
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_49

Consensus_repeat	Method
GCATCGCCCACCACATCAGACGAAACTCTCAATGTTTGCTT	CRISPRCasFinder

spacers of NC_019780_49

>49.1|3607460|28|NC_019780|CRISPRCasFinder
AATCCCCCCTTCATAAGGGGGGGAAAAC

CRISPR arrays and Neighbor proteins around NC_019780_49

CRISPR arrays

The CRISPR arrays of NC_019780_49

>merge|NC_019780|49|3607419-3607528|CRISPRCasFinder
GCATCGCCCACCACATCAGACGAAACTCTCAATGTTTGCTTAATCCCCCCTTCATAAGGGGGGGAAAACGCATCGCCCACCACATCAGACGAAACTCTAAATGTTTGCTT

>NC_019780|49|47|3607419-3607528|CRISPRCasFinder
GCATCGCCCACCACATCAGACGAAACTCTCAATGTTTGCTT	AATCCCCCCTTCATAAGGGGGGGAAAAC
GCATCGCCCACCACATCAGACGAAACTCTAAATGTTTGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_015230945.1|3594805_3595348_+|CheW-domain-containing-protein	unknown	unknown	gnl|CDD|214588
NC_019780.1|WP_015230951.1|3601182_3602124_+|DMT-family-transporter	unknown	unknown	gnl|CDD|307170
NC_019780.1|WP_015230961.1|3616579_3616894_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_041235565.1|3598428_3598890_+|DUF3119-family-protein	unknown	unknown	gnl|CDD|371464
NC_019780.1|WP_015230950.1|3600601_3601078_+|fasciclin-domain-containing-protein	unknown	unknown	gnl|CDD|225214
NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf	unknown	unknown	gnl|CDD|178901
NC_019780.1|WP_015230953.1|3607669_3608695_+|O-methyltransferase	unknown	unknown	gnl|CDD|366359
NC_019780.1|WP_015230954.1|3608788_3609724_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|215029
NC_019780.1|WP_015230952.1|3602227_3607402_+|non-ribosomal-peptide-synthase	unknown	unknown	gnl|CDD|237108
NC_019780.1|WP_015230946.1|3595489_3597634_+|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|214599
NC_019780.1|WP_015230947.1|3597638_3598424_+|MlaE-family-lipid-ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|215575
NC_019780.1|WP_156800842.1|3598985_3599135_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP	unknown	unknown	gnl|CDD|366812
NC_019780.1|WP_156800843.1|3599335_3600397_+|DUF3086-domain-containing-protein	unknown	unknown	gnl|CDD|371451
NC_019780.1|WP_156800844.1|3610605_3611097_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800845.1|3614998_3615151_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230944.1|3592826_3594542_-|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl|CDD|234621
NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase	unknown	unknown	gnl|CDD|238786
NC_019780.1|WP_041235566.1|3609921_3610410_-|DUF4065-domain-containing-protein	unknown	unknown	gnl|CDD|379096

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_015230945.1|3594805_3595348_+|CheW-domain-containing-protein	gnl|CDD|214588	smart00260, CheW, Two component signalling adaptor domain.	9.52404e-29
NC_019780.1|WP_015230951.1|3601182_3602124_+|DMT-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	9.01483e-12
NC_019780.1|WP_041235565.1|3598428_3598890_+|DUF3119-family-protein	gnl|CDD|371464	pfam11317, DUF3119, Protein of unknown function (DUF3119). This family of proteins has no known function.	9.1493e-49
NC_019780.1|WP_015230950.1|3600601_3601078_+|fasciclin-domain-containing-protein	gnl|CDD|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	5.37285e-53
NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf	gnl|CDD|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	2.96416e-112
NC_019780.1|WP_015230953.1|3607669_3608695_+|O-methyltransferase	gnl|CDD|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	1.16439e-41
NC_019780.1|WP_015230954.1|3608788_3609724_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|215029	PLN00016, PLN00016, RNA-binding protein; Provisional.	1.17347e-150
NC_019780.1|WP_015230952.1|3602227_3607402_+|non-ribosomal-peptide-synthase	gnl|CDD|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NC_019780.1|WP_015230947.1|3597638_3598424_+|MlaE-family-lipid-ABC-transporter-permease-subunit	gnl|CDD|215575	PLN03100, PLN03100, Permease subunit of ER-derived-lipid transporter; Provisional.	1.24841e-104
NC_019780.1|WP_015230946.1|3595489_3597634_+|methyl-accepting-chemotaxis-protein	gnl|CDD|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.35476e-63
NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP	gnl|CDD|366812	pfam01789, PsbP, PsbP. This family consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria. The 23 KDa PsbP protein is required for PSII to be fully operational in vivo, it increases the affinity of the water oxidation site for Cl- and provides the conditions required for high affinity binding of Ca2+.	4.22889e-76
NC_019780.1|WP_156800843.1|3599335_3600397_+|DUF3086-domain-containing-protein	gnl|CDD|371451	pfam11285, DUF3086, Protein of unknown function (DUF3086). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	1.82924e-173
NC_019780.1|WP_015230944.1|3592826_3594542_-|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	4.20047e-12
NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA	gnl|CDD|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	1.44989e-117
NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase	gnl|CDD|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	4.3009e-41
NC_019780.1|WP_041235566.1|3609921_3610410_-|DUF4065-domain-containing-protein	gnl|CDD|379096	pfam13274, DUF4065, Protein of unknown function (DUF4065). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and viruses. Proteins in this family are typically between 155 and 202 amino acids in length.	0.000461632

Protein sequences

>NC_019780.1|WP_015230952.1|3602227_3607402_+|non-ribosomal-peptide-synthase
MFVLNQKLPTASIQKINWIKSEKNANELTDKIAIALQIKSSLDPFTLKQSLQTLTDRHPLLCQNYYQTEGKLVAVAGEKTSIALETFAASDWTEETLNHQLLAFAKHPFNLEKESPLRCGLFLVSSTETILVLKLHKIAGDQESLGILLRELVTVYEAKINQETPQLFSPTASYQDYIQQELAFLESEEGQELKEEWRSRLQGELPILNLPSYGTPSPVRNDEGAAYKVCLDSDIVQQLRQLAQENKVDVKEIFFSAFQVLLYRYTGEEDLKIALYRERDQDFTGVLGNFTRIAIAQTAFSANLSFRHFLEQVTHTVSEIESKGSYPFHLLVEELEESLNESHSPICQVAFQYSQSSLPKTQQLDLEIYNLPQQSVDFDFSLEMIEQSHGLEAVFYYAIELLDRETVTQFAQHFQNLLVSIIENPESAIGELSILSEAERETILNSWNETATDRDLSHCLPQLFAEQVERNPNAIALSFQSQTITYQELNHHSNQVAHYLRRLGVKPETPVGICIERCLDMVVGLLGILKAGGAYVPLDPAYPRDRVDYMLTDSQAPVLLTQSHLTEQFSNYQGTIVCLDRDRDAIAQEDDKNLESGLTADNLAYIIYTSGSTGKPKGVQIPHRCLTNFLQSMRNTPGLSAEDTLLAVTTICFDIAGLELYLPLIVGAKVVIASREVATDGWRLSETIETEKITVMQATPATWQMLLAVGFTRGKGLKVLSGGEALPMKLGDRLLETGAEVWNLYGPTETTIWSAVYKVDRENRIKVTIAPIGKPIANTQIYILDSYLQPVPIGVTGEIYIGGDGVGRGYLNRPELTAERFLSSPFHPENTLYKTGDLARYLPDGNIEYLGRADNQVKIRGFRIETGEVEAAIEQHSYIKSAVVMGREDRPGDKRLVAYVIPQTPEAGEEELTENQLNSWENIFDNQGYAEEKEVGDPLFNTALWRNSYNNQRIPDAQMRTWASDIVRQILAKQPQQVWEIGSGTGMLLFQIASHTQFYYGTDLSEVSIEYTRQILDQYREDYNEVRLAQKPADDFSGVEKGSYDLVILNSIAQYFPSVDYLLAVIEGAIHSVKSGGAIFLGDIRSQSLLEAFHTSVELYKAPSSLSTAELQKRIQKKIQQEKELSIAPEFFIALKSHYPEITEVQIRLERGKQANELNKYRYHVWLYVGDSSQRIITPPVVEGKEMTAAEIKGYLQENHPDQVCFTNLPNQRTIADAETIKALQRADVETVEQLRELPRERSAIEPEALHEISAELGYKLELCWSPNSKEGSYDAAFVREEQQGIILTPLTQSTRSGGNWMRYVGDPLTSQIATEIAPQLRKHCSEKLPAYMVPTAFVVLESFPLTPNGKVNRRALPAPDLSSFAQENEYIPPRDRAEETLANIWSEILNLPKIGVHDDFFDLGGHSLLAIVLMSKIEQEFGKQLPLSTLLSNRSIAALAQKIEGNQEAHSSSLVPIQIKGTQPPFFCVHPAGGHVLCYTDLAKYLGNNQPVYGLQAPGFNEGEKILDRVEDMAHFYIETIKEFQAEGPYKIGGWSFGGVVAYEMAQQLLKRGEEVELLAVMDAWTPILLDPNKEIDGVYLGGVLNRYFGGIFGGINLVSPQELEGLNAEERVELILDKAEEKNLFPPDSDRAQNRRFVDVIVGTLKATYHYQPQHYPGKVTLLRPQERHYHEPDPQLVWVELYAIMDAAEIDLISVPGSHFSFIKEPNCQQTAEQLATRLHR
>NC_019780.1|WP_015230951.1|3601182_3602124_+|DMT-family-transporter
MTEQVQNQRQLFSLPIDAFVALVGSMICISFTPIFIRLSDLELSANATIFNRFWMASLALLLVKQVSSQGKEKSSPLSSQQIMLLIGDGLILATGLILWAWSLDRTTVAKSSLMHNLVPIFTVLGGWLVLGKTFNRKFLVGMAVAIAGAMLLEADSLLALKLTPELIADLVALLSAVFFGIHPLLAERLRADLDAVTIMTWSSVTSSILLFPIAIVATDQLFPPSLNGWLAVIALALVSQILGVGLWTYSLKRIASGFASLVALIIPALSAIEGWIIFSESLNFLTGISFAVILIGMYLAISSRSVVKPNPES
>NC_019780.1|WP_015230950.1|3600601_3601078_+|fasciclin-domain-containing-protein
MRLLKSFLVSLSAVVFFTFNTLSASAADIVDTAVEAGSFETLVTAVKAADLVDTLKGEGPYTVFAPTDEAFAALPEGTVESLLQPENKAKLTSILLYHVAAGNVTSDQIQAGSLKSAEGSNLSITVDEGVKVDNANVVKADIEADNGVIHVVDQVLLP
>NC_019780.1|WP_156800843.1|3599335_3600397_+|DUF3086-domain-containing-protein
MTKNNKMTVDKQKRTIHEQALLKTEKPNLENNLDLDELKAEKARLEQEIKTLEAEKQKRIAAEATETKTALAKMVQDSLKELEEKRQNLQQSVEQLERRRDRAEQEMRTTFAGVSQELAVRLQGFKDYLVGSLQDLAVAAEQLDLPSMEEPVAEANPLPTTPPPETKAASPQFTQQEWQEESKQIRTLLDQYRAFPDYYGPPWQLRRTFEPIHADRAQEWFFSLAGRGAIPTMGSRLQNILVASAIISVLYDIYGEQLRTLVLADSPERLGEWRRGLQDCLGISRSDFGPNRGVVLFESPESLIQRANRIMENEDLPLIIIDQSENEVDLSLLQFPLWLAFAKDFQKTEGYSF
>NC_019780.1|WP_156800842.1|3598985_3599135_+|hypothetical-protein
MLDLISYLVAYNLLRINCLLFTIHCLLITDHWSLQWVEFTKPNIDPIDS
>NC_019780.1|WP_041235565.1|3598428_3598890_+|DUF3119-family-protein
MIEKKGGLLFMTSTTATSKQETVTLSPDYRLPAAILAIALGLIFLGNSMILGSQLFSLIVLILGIIISLFSFFLTLQTAIIRLSFTEEALLVYRSQKLIRKFPYSDWSNWEIFWKPVPILFYFREVKSIHFVPVLFDVKTLRKCLEERITINN
>NC_019780.1|WP_015230947.1|3597638_3598424_+|MlaE-family-lipid-ABC-transporter-permease-subunit
MALKTGLGSWLQRLMAALFLGGQILLHLKPHKIHRRNTLEQMAVVGPDSLLIALVTAGFVGMVFTIQVAREFINFGAGTAVGGVLAIALTRELAPVLTAVVLAGRVGSAFAAEIGTMQVTEQIDALYILKTDPIEYLVIPRIIACCTMLPILTILSLITGMAGGLLIAITVYNLSDTVFLDSAKSFLGLWDLISAMIKASVFGMLIAIIGCNWGLTTTGGAKGVGQSTTTAVVTALLAIFISNFLLSWLMFQGAGSAFQGI
>NC_019780.1|WP_015230946.1|3595489_3597634_+|methyl-accepting-chemotaxis-protein
MASSIKNQNDYERAKTAYITGNYEEAASIIEKLAESSPSDPEILLLRGHIYCYFQEFDQAREQYNLVIENTDSAEYIDCANSGLETVRQWLDAPFRDDSIDEPTEASEFPFGDLSEDEITAISALDDDDDDEPLTNLKDTGFSPSQNLDSTHRQVATEISNSQRTNLDDDDPDTAKASPPTPTAEETNANQALFTTSNQEGAGLFSSTASQQGTNDLSFDGEGESNEPIVEQEQGLLAFLDQVSLAKKQQILADAVGVASAVVVALGSFGISSFGENQPGFFGNLVKSSALGLVGGVGSGAVTWVMGGLVVKQVKRSTGDLQAQLYAVQQGNLQAKATVYSQDEFGQLATGFNQMTRVVSTTTKEAQRKAQEQEQAKEDLQRQVIRLLDDVEGVARGDLTVQAEVSADVLGAVADAFNLTIRNLRTIVQQVKEAARQVNEGAAESSSFARGLSEDALRQAEELAVSLNSSQMMTESIQRVADNAKEAESVARTASETALKGGEAVDSTVAGILQIRETVAQSTRKVKRLAESSQEISKIVSVISQIATRTNNLALNASIEAARAGEAGRGFAVIADEVRQLADRSSKSLREIEKIVLQIQSETSFVMIAMEEGTQQVIEGTERAEQAKNALEDIIQASNRIDSLVESITADTVEQSKTAQSVAQVMQSVEMTAQGTSQESQQVSTALQNLVSLAGDLLASVERFRVNPEDELKS
>NC_019780.1|WP_015230945.1|3594805_3595348_+|CheW-domain-containing-protein
MVNSTAFGEENNQSALNEAEDLSAEIQSYEPPEGELHLRLYLPSKRELAIPATGIREVVSQSPSLITPIPNASVLLLGTMNLRGQVVWVADLGQFLGEPGTLTTERSEIPVITIEGEEMIMGLAVEQIAGMEWLEPEALEMASNLSDEIAPFILGEWEEEGSALLLLDPSAILRSARWAA
>NC_019780.1|WP_015230944.1|3592826_3594542_-|hypothetical-protein
MLYIAEVKKQTKLFMGGTRTVLHLLACQQNDNRWSAIPGEETVSTDDVTQAFGEGALVTVNLGANRQVQGKVELAGARVANLLQTFSRQLEKTKGQEQEIEDWKESLGIQAKELNRRQSELEKAEEALEEKEQQLSQLEKERAEIQRLREQWESDRAELEGAWNQLRGEQQRLETLQEELKDKQGLTPEQTASLRALVEQVERSIEATKTTLQPLQESQNLVLEKTTAIQSQWKTLDQERQQAEDKQNQARELWEQLSQLRQQFQEKQGNLLQSQQSLATVQSQLETKQQIVTYLGTQLQKQSEARDILSRLVINSPQLKIQQDVDIQSLEEMPIEQLEKEFNSMKKSFDGAVSFVKDQEEELDYQLQSVRDLEAQLETANNEEKENIKNELAEEQDRYRFLEKTLVGQRRNLMAREDILEQHKKNLKRRRGEEHEEEEVTKVDLSPIFNKIDSQRDYSEDEFHQVNEEIETLQARVKELEAKVKEQQQECENTRVEINKSESKWLDIQREADELSTRVEVNGEILHQREKELQSIREQLETVATEAEKINSEDQQNQLAQVRKLLDDSLP
>NC_019780.1|WP_015230953.1|3607669_3608695_+|O-methyltransferase
MEAKNKIFSIIQGFWGSQCLYIATCLGIPNLLEEYGAQSVESLAEKTETHTETLYVVLRGLAHLEILEEKPDRVFAPTEASSLLVTNAGPSIGHFALHITEPCQWDGWKELYDAVHTGEVAFERANGKGVYEFTRDNPWSGDVFINAMSFLTDHATEALMAVYDFGQYETVMDVGGGQGGLIAEIVKTYNCKGMLFDVPYVIETAPSFLESRGVPKDAIALHTGDVFEKVPTGADAIVMKYFLSAWNDEDAGKILARCREALPDHGKIVLLQSIVPDVGEPTVCPDGIMPGLFAVQIRSAVPGGVWRTLKQYQEIFANSGFKLDRVVHTSTNLSAMEFSLA
>NC_019780.1|WP_015230954.1|3608788_3609724_-|NAD-dependent-epimerase/dehydratase-family-protein
MKILIMGGTRFIGVALTKILVEQGHKITLFNRGNNPSPVEGVKTINGDRKDADQLKEKLATETFDAIFDNNGRELSDTQPLVELFKDKIQHFVYVSSAGVYLKSDQMPHYEADAIDPKSRHKGKHDTETYLSEMGMPWTSVRPVYIYGAGNYNDLEAWFFDRIVRDRAVPIPGHGEHITQLSHVQDLAYAMASILGNKNAIGQVYNISGERYVTFNGIARACAKAIGKSPDDLKLVHYNPKDFDFGKKKPFPLRMQHFFADISKAKTDLQWQPQYDLISGLKESFEKDYLVQNRHEAEIDFSVDDEILSSL
>NC_019780.1|WP_041235566.1|3609921_3610410_-|DUF4065-domain-containing-protein
MLEKLIVFFVRKTKGYITKTQLVKFLYLADLAAVKWTEKQLTDLDWLYYQYGPWNEEIDLALDGFYQNEVLTQSKLGNAVVIQPTENCPEIKHLGFSKRLELMLRNIQKEWAGLNSQKIAELLDFVYQTEPMIVAKSRHTPEEKVSLNLYLEHEKVREELGV
>NC_019780.1|WP_156800844.1|3610605_3611097_+|hypothetical-protein
MNMTFVYQWLQPSQFLLTLLTTLALLTLPMFSVIARPIEMMKNNQSTFQEGTYIYGQSPQPNEIGNEYVVFEVTDGKLVGVLYMPHSEFSCFEGEIKGDELDLIVDHPYDDTTNRYSIALESVSPVASRDETMKTPLTLKGYHPLEELSPNDERMLAHCQTAF
>NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP
MFRATFALIFLVLNLTLFGCSTPTSGLQAYTNGTEGYKFLYPNGWQEVKVDNNTAGVDVVFRDLVEQTENISVVINQVGEDRQLTDLGTPSEVGQRLKNTIAPPNSDRQGELIRADELEKKGQTYYLLEYQVTFPDNRKRHNMASVAVSRGKLYTFSISTPQRRWEGLSDRFNTIADSFEVS
>NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf
MELVLASASPARLRLLRRVGIEPIVQKSGFDESQVKTRDPKTLVTELATAKAQTVAPKFPDHLILGCDSVMVVAGEIYGKPENEANAIALWQQMRGKQGTLYTGHTLIDSIQNQQRVRCGITTVYLSSIDDRAIADYVATGEPLNCAGGFALEGRGGLFVEKIEGCHSNVVGLSLPLFRQMLEELGYKVSDFWKH
>NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA
MSKTMRLKERHQNILSATIHKYVATAEPVSSKTLVNEYNLTVSSATVRNAMGWLEKAGLLYQPHTSAGRIPSDWGYRTYVDQIMLPDRALREQLDQLLSQAIKEEVGSLEALLYGVAQLLATLSGYIALITFPQQQTSYLRHLQLVPLENRRIMLIIITDSYQTQSGLIDPPRRITEKLEAGEDIEQELDLLSNFLNQKLQGRSLSELATLKARDLEQEWKQDGEFLEEICQQVLQRCQSGASSQILVRGISQVLQQPEFSQLQQVQTLLHLLEAEQDQLRSVICNVVEGGVTVKIGSENPLEPMQTCSLVSANYYQGESPAGSLGLVGPTRMLYENAIALVEVAADTLSQSLSQG
>NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase
MANTPFQQVSVEELANALQTQGKDNLQLVDVREPSELEISAIEGFTNLPLSQHEQWAPQIYQHLDPEKETYVLCHHGIRSAQMCYWLNQQGFKTVKNIQGGIDAYSLTIDSSIPRY
>NC_019780.1|WP_156800845.1|3614998_3615151_+|hypothetical-protein
MTNFGFPKRSHAGLGTIIRIKDRPSRGIIVLTILPETAQSRQVFPLDFFR
>NC_019780.1|WP_015230961.1|3616579_3616894_-|hypothetical-protein
MTKEAKKLVIITEKLLLKKVAKIIDEAGATGYTVLATGGKGSRNVRSSGQPTVGDTESNIKFEVLTPTREMALKISDEVAARFFEDYSGITYLCEAEVLHAHKF

Crispr_ID: NC_019780_50

• CRISPR_ID: NC_019780_50
• CRISPR_location: 3622569-3622679
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NC_019780_50

Consensus_repeat	Method
CCGTAGTTTGCCCCCCAACCCCCCAATTCTGG	CRISPRCasFinder

spacers of NC_019780_50

>50.1|3622601|47|NC_019780|CRISPRCasFinder
GGGGCTTTTCTTCGGTGGGGTGAAATGAAATGAAACCCAACATTAGA

CRISPR arrays and Neighbor proteins around NC_019780_50

CRISPR arrays

The CRISPR arrays of NC_019780_50

>merge|NC_019780|50|3622569-3622679|CRISPRCasFinder
CCGTAGTTTGCCCCCCAACCCCCCAATTCTGGGGGGCTTTTCTTCGGTGGGGTGAAATGAAATGAAACCCAACATTAGACCGTAGGTTGCCCCCCAACCCCCCAATTCTGG

>NC_019780|50|48|3622569-3622679|CRISPRCasFinder
CCGTAGTTTGCCCCCCAACCCCCCAATTCTGG	GGGGCTTTTCTTCGGTGGGGTGAAATGAAATGAAACCCAACATTAGA
CCGTAGGTTGCCCCCCAACCCCCCAATTCTGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl|CDD|234621
NC_019780.1|WP_156800845.1|3614998_3615151_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230962.1|3616969_3618109_-|sodium-dependent-bicarbonate-transport-family-permease	unknown	unknown	gnl|CDD|225866
NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP	unknown	unknown	gnl|CDD|366812
NC_019780.1|WP_015230963.1|3618651_3620232_-|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl|CDD|235050
NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf	unknown	unknown	gnl|CDD|178901
NC_019780.1|WP_041235568.1|3628205_3628394_+|CPXCG-motif-containing-cysteine-rich-protein	unknown	unknown	gnl|CDD|379524
NC_019780.1|WP_015230961.1|3616579_3616894_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_156800844.1|3610605_3611097_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230965.1|3623184_3623484_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230968.1|3626864_3627986_-|site-2-protease-family-protein	unknown	unknown	gnl|CDD|100085
NC_019780.1|WP_015230971.1|3629036_3629570_-|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl|CDD|234587
NC_019780.1|WP_015230970.1|3628393_3628744_+|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl|CDD|212139
NC_019780.1|WP_015230974.1|3630906_3631500_-|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl|CDD|235063
NC_019780.1|WP_156800909.1|3623496_3624468_-|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230973.1|3630271_3630901_-|alpha-ketoglutarate-dependent-dioxygenase-AlkB	unknown	unknown	gnl|CDD|372627
NC_019780.1|WP_041235570.1|3629611_3629809_+|hypothetical-protein	unknown	unknown	unknown
NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase	unknown	unknown	gnl|CDD|238786
NC_019780.1|WP_015230964.1|3620315_3622355_-|NAD(P)H-quinone-oxidoreductase-subunit-5	unknown	unknown	gnl|CDD|236005
NC_019780.1|WP_015230967.1|3624903_3626412_+|UbiD-family-decarboxylase	unknown	unknown	gnl|CDD|223121

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA	gnl|CDD|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	1.44989e-117
NC_019780.1|WP_015230962.1|3616969_3618109_-|sodium-dependent-bicarbonate-transport-family-permease	gnl|CDD|225866	COG3329, COG3329, Predicted permease [General function prediction only].	5.33106e-138
NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP	gnl|CDD|366812	pfam01789, PsbP, PsbP. This family consists of the 23 kDa subunit of oxygen evolving system of photosystem II or PsbP from various plants (where it is encoded by the nuclear genome) and Cyanobacteria. The 23 KDa PsbP protein is required for PSII to be fully operational in vivo, it increases the affinity of the water oxidation site for Cl- and provides the conditions required for high affinity binding of Ca2+.	4.22889e-76
NC_019780.1|WP_015230963.1|3618651_3620232_-|NADH-quinone-oxidoreductase-subunit-M	gnl|CDD|235050	PRK02546, PRK02546, NAD(P)H-quinone oxidoreductase subunit 4; Provisional.	0
NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf	gnl|CDD|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	2.96416e-112
NC_019780.1|WP_041235568.1|3628205_3628394_+|CPXCG-motif-containing-cysteine-rich-protein	gnl|CDD|379524	pfam14255, Cys_rich_CPXG, Cysteine-rich CPXCG. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There are 5 conserved cysteines which occur in a CPXCG motif and a DCXXCCXP motif.	1.47428e-15
NC_019780.1|WP_015230971.1|3629036_3629570_-|crossover-junction-endodeoxyribonuclease-RuvC	gnl|CDD|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	1.96282e-69
NC_019780.1|WP_015230970.1|3628393_3628744_+|nucleoside-triphosphate-pyrophosphohydrolase	gnl|CDD|212139	cd11532, NTP-PPase_COG4997, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in a group of uncharacterized proteins from archaea and bacteria. The family includes some uncharacterized hypothetical proteins from archaea and bacteria. Although their biological roles remain unclear, the family members show significant sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, the family contains a single MazG-like domain.	4.43194e-33
NC_019780.1|WP_015230974.1|3630906_3631500_-|molybdenum-cofactor-guanylyltransferase	gnl|CDD|235063	PRK02726, PRK02726, molybdenum cofactor guanylyltransferase.	2.88015e-86
NC_019780.1|WP_015230968.1|3626864_3627986_-|site-2-protease-family-protein	gnl|CDD|100085	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. In this subgroup, SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain. SpoIVFB is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.	3.24829e-87
NC_019780.1|WP_015230973.1|3630271_3630901_-|alpha-ketoglutarate-dependent-dioxygenase-AlkB	gnl|CDD|372627	pfam13532, 2OG-FeII_Oxy_2, 2OG-Fe(II) oxygenase superfamily.	2.09482e-34
NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase	gnl|CDD|238786	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.	4.3009e-41
NC_019780.1|WP_015230964.1|3620315_3622355_-|NAD(P)H-quinone-oxidoreductase-subunit-5	gnl|CDD|236005	PRK07376, PRK07376, NADH-quinone oxidoreductase subunit L.	0
NC_019780.1|WP_015230967.1|3624903_3626412_+|UbiD-family-decarboxylase	gnl|CDD|223121	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism].	0

Protein sequences

>NC_019780.1|WP_015230964.1|3620315_3622355_-|NAD(P)H-quinone-oxidoreductase-subunit-5
MEQLYQYAWLIPVIPLVGAMIVGVGLISFNQATSRLRQPVAIFIVSLMGVTMGLSFALLWSQINGHEAFLNTFEWAAAGDFKLTMGYTIDHLTTVMLAVVTTVAFLVMIYTDGYMAHDAGYVRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMASYLLIGFWYDRKAAADACQKAFVVNRVGDFGFLLGMLGLYWATGTFEFSEMGVQLETLVESGVIGASLASLFGVLVFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLIARMYPVFENLPSVMTIIAWTGAFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGVGGYTAGLFHLMTHAFFKAMLFLCSGSVIHGMEEVVGHNPALAQDMRLMGGLRKYMPITSLTFLVGTLAICGIPPFAGFWSKDEILSVAFSANPALWFIGWLTAGLTAFYMFRMYFITFEGQFRGNDQSILDSLKPAFGPGAMDTRELESEQEEEEHHHSDTPHESPVSMTLPLVILAIPSIAIGWLGKPWENFFEEFVFAPGETLEEVQEMMAAFEWSEFLIMAGNSVGIALIGITVASLMYQSKKIDPSAIAQKFPSLYRFSLNKWYFDELFNNIFVKGSRRVARQVLEVDYRVVDGAVNLTGLMAIISGEGLKYFENGRAQFYALIVFGAVLGFVIVFSVA
>NC_019780.1|WP_015230963.1|3618651_3620232_-|NADH-quinone-oxidoreductase-subunit-M
MTQFPWLTTVILFPLIASFFIPFIPDKDGKQVRWYALVIGLINFAFIIAGFYLDYDFSNPNLQLVESYSWIPQLDLNWSVGADGISMPLIVLTGFITTLAILAAWPVSLKPKLFYFLILAMYGGQIAVFAVQDMLLFFLVWELELIPVYLLLSIWGGKKRLYAATKFILYTAGGSLFILVAGLTMAFYGDTVTFDMRALADKDIALNFQLWLYAGFFIAYAVKLPIFPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNAGMLPDAHAYFAPALVILGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTNLGLSGAVLQMVSHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMQKIFAMFTTCSLASLALPGMSGFVAEVMIFIGFSTSDAYNTTFKVLVVFLAAVGVILTPIYLLSMLREIFYGKENQELVSHEVLVDAEPREVFIIACLLIPIIGIGFYPKILTQVYDSTTIAYTDRLRNSVPSLVKPSDVAQADPSLLSLTAPKLK
>NC_019780.1|WP_015230962.1|3616969_3618109_-|sodium-dependent-bicarbonate-transport-family-permease
MDFLSDFLTRFGDKLQSPTLGFLIGGMIIAAVNSRLQIPDAIYKFIVFMLLIKVGLSGGIAIRNANLAQMLLPAVFAAAIGIIIVLIARNTLARLPKVKVVDAIATGGLFGAVSGSTLAAGLTMMESEAMQYEPWAAALYPFMDIPALVTAIVLASIYKSKESQTVGEDITQQEYLSKQAVAAGAGEYPSEPDYPTTRQEYRNQQREQQGKRVEIWPIVKESLQGSALSALLLGLALGILTRPESVYESFFNPLFRGLLSVLMLVMGMEAWSRIGELRKVAQWYVVYAAAAPLLHGLIGFGLGYLAHVTTGFSAGGVVILAVIASSSSDISGPPTLRAGIPKANPSAYIGSSTALGTPIAIAVGIPLYIGLAQTLMGGG
>NC_019780.1|WP_015230961.1|3616579_3616894_-|hypothetical-protein
MTKEAKKLVIITEKLLLKKVAKIIDEAGATGYTVLATGGKGSRNVRSSGQPTVGDTESNIKFEVLTPTREMALKISDEVAARFFEDYSGITYLCEAEVLHAHKF
>NC_019780.1|WP_156800845.1|3614998_3615151_+|hypothetical-protein
MTNFGFPKRSHAGLGTIIRIKDRPSRGIIVLTILPETAQSRQVFPLDFFR
>NC_019780.1|WP_015230960.1|3614103_3614454_-|rhodanese-related-sulfurtransferase
MANTPFQQVSVEELANALQTQGKDNLQLVDVREPSELEISAIEGFTNLPLSQHEQWAPQIYQHLDPEKETYVLCHHGIRSAQMCYWLNQQGFKTVKNIQGGIDAYSLTIDSSIPRY
>NC_019780.1|WP_041235567.1|3613023_3614094_-|heat-inducible-transcriptional-repressor-HrcA
MSKTMRLKERHQNILSATIHKYVATAEPVSSKTLVNEYNLTVSSATVRNAMGWLEKAGLLYQPHTSAGRIPSDWGYRTYVDQIMLPDRALREQLDQLLSQAIKEEVGSLEALLYGVAQLLATLSGYIALITFPQQQTSYLRHLQLVPLENRRIMLIIITDSYQTQSGLIDPPRRITEKLEAGEDIEQELDLLSNFLNQKLQGRSLSELATLKARDLEQEWKQDGEFLEEICQQVLQRCQSGASSQILVRGISQVLQQPEFSQLQQVQTLLHLLEAEQDQLRSVICNVVEGGVTVKIGSENPLEPMQTCSLVSANYYQGESPAGSLGLVGPTRMLYENAIALVEVAADTLSQSLSQG
>NC_019780.1|WP_015230958.1|3612178_3612766_+|septum-formation-inhibitor-Maf
MELVLASASPARLRLLRRVGIEPIVQKSGFDESQVKTRDPKTLVTELATAKAQTVAPKFPDHLILGCDSVMVVAGEIYGKPENEANAIALWQQMRGKQGTLYTGHTLIDSIQNQQRVRCGITTVYLSSIDDRAIADYVATGEPLNCAGGFALEGRGGLFVEKIEGCHSNVVGLSLPLFRQMLEELGYKVSDFWKH
>NC_019780.1|WP_015230957.1|3611611_3612160_+|photosystem-II-oxygen-evolving-complex-protein-PsbP
MFRATFALIFLVLNLTLFGCSTPTSGLQAYTNGTEGYKFLYPNGWQEVKVDNNTAGVDVVFRDLVEQTENISVVINQVGEDRQLTDLGTPSEVGQRLKNTIAPPNSDRQGELIRADELEKKGQTYYLLEYQVTFPDNRKRHNMASVAVSRGKLYTFSISTPQRRWEGLSDRFNTIADSFEVS
>NC_019780.1|WP_156800844.1|3610605_3611097_+|hypothetical-protein
MNMTFVYQWLQPSQFLLTLLTTLALLTLPMFSVIARPIEMMKNNQSTFQEGTYIYGQSPQPNEIGNEYVVFEVTDGKLVGVLYMPHSEFSCFEGEIKGDELDLIVDHPYDDTTNRYSIALESVSPVASRDETMKTPLTLKGYHPLEELSPNDERMLAHCQTAF
>NC_019780.1|WP_015230965.1|3623184_3623484_+|hypothetical-protein
MEKEEQSAPVWEYKVIHLNIKNTEAPDAEAASTATKGTFSPEFLKQEFPDIYSTKTASNHPARQLQEALNKLGKEGWELFEISQVGALKMMFFKRLKQE
>NC_019780.1|WP_156800909.1|3623496_3624468_-|hypothetical-protein
MMTLGAAIRIHYPKVEEVFVCSSDWLLTNLSNELLSQNLRVWRVRRQNKLLEIENRKTGEVYAYSLDLSQEIPDPKELITKLEQLIEQERESVNAKIQELSQLEELLSNRKTFAQKTEKKQESSLIVEEFSPDLETSVNGKVPTSRDQITDSESLKSAIEQIIEEIKNSSRHKKVTASTISNAFQKKFGITVNQIVQELDLGKNITDFLASDPQLLKQKNITDGAINKRAKAKSKTTCSKKITNRIELEKVLWEILNIFHRKNGSHSVPITTLGGDFKEYYGQSVSDVMKAIKITGTFTKFLESSKEFKLKKIGKIYHVVIID
>NC_019780.1|WP_015230967.1|3624903_3626412_+|UbiD-family-decarboxylase
MARDLQEFIKQVDKRGQLRRITVPVDPELEITEISNRMLKAGGPALLFENVKGASYPVAINLMGTLERVCWAMNMEHPEELETLGKKLGMLQQPKPPKKVSQAIEFGKLLLDVAKAKPGRDFFPPCQEVIEKGEDVDLNRLPLLRPYPEDAGKIITLGLVITKDVETGTPNVGVYRLQLQSKNTMTVHWLSVRGGARHLRKAAENGKKLEVAIALGVDPLIIMAAATPIPVDLSEWLFAGLYGGSGVKLANCKTVDLQVPADSEFVLEGTITPGEVLPDGPFGDHMGYYGGVEDSPLIRFQCVTHRKNPVYLTTFSGRPPKEEAILAIALNRIYTPILRQQVSEITDFFLPMEALSYKAAIISIKKAYPGHAKRSALAFWSALPQFTYTKFVIVVDESINIRDPREVVWAISSKVDPSRDVFILPETPFDSLDFASEKIGLGGRMGIDATTKIPPETDHEWGKPLESDPEMAKTVDQRWEEYGLADINLEEVNASLFGYDLH
>NC_019780.1|WP_015230968.1|3626864_3627986_-|site-2-protease-family-protein
MNNNIRVGNLFGIPFYVNPSWFLVLALVTWVYGSQLQNFPQLVGVTPWLLGLVAALLLFSSVLAHELGHSFVAIKQGITVNSITLFIFGGLASLEEDSKTPGEAFSVAIAGPVVSLILFGVFTFLEVSLPLSQPLSAVVGLLATVNLILALFNMIPGLPLDGGNVLKSIVWKITGNQYRGIFIASIVGQFIGWSAIALGVLSVFGVTQFGSLWTALIGFFLLQNAGRSAQSATIQDKLSRFTAEEAVSKNSPVIAADLNIREFVNEYVIGKGQWSKFLVTDEEGKLIGQLNVDDLKIIPTSEWTEKSVRELTKPQQVNSVKPKQTLLEVVMMFEKNKESEVAVIGDNGVVFGLVEKSGIANFLEEHKEELKAA
>NC_019780.1|WP_041235568.1|3628205_3628394_+|CPXCG-motif-containing-cysteine-rich-protein
MENTSQFVCAFCGEKNPTFVDIGAGNSQSYVEDCQVCCNPNVLYIEIDEDTLDVNIETDCES
>NC_019780.1|WP_015230970.1|3628393_3628744_+|nucleoside-triphosphate-pyrophosphohydrolase
MKQNHNKLVRDRIPEIIKNSGNQCEISILSTAEYQVSLREKVIEEAREVAAASSSEELVKEIADLYEVIDALVTVMEIDKAAIIRKQKQRREERGGFQKRIKLISTSFTPYSIFEK
>NC_019780.1|WP_015230971.1|3629036_3629570_-|crossover-junction-endodeoxyribonuclease-RuvC
MTSLTILGLDPGLATFGFGCITASESTRETSTKSKKLQDYQQLKEDSLQLIDFGVIETSSKQPIEKRLATIYEDLHHVVAEFQPDLVAIEKLFFYRMGNTINVAQARGIVLLVLGQAELPYVEFSPPQVKQTITGYGKADKQEVQTAITHELNLTCIPKPDDAADALAVAVTAWHCR
>NC_019780.1|WP_041235570.1|3629611_3629809_+|hypothetical-protein
MATARELLYNNAGEMVKMNPEAYTELSTRVGQISAAWPTIMPPEQPVYSAEEVMEMAEEIKQMMN
>NC_019780.1|WP_015230973.1|3630271_3630901_-|alpha-ketoglutarate-dependent-dioxygenase-AlkB
MSDQISLFPEENKTNYQQINLPHSDIKFYPQFLDSVTSDNIFEKLKQEINWQQEYIKIYGKENPVPRLTAWYGDRGYSYTYSGITMNPESWTETLLLIKHKIETIANVKFNSVLLNFYRDGNDGVAWHSDDEKELGKNPVIGSVSFGGKRRFSFKSRDKTESQKYDLNLGNGDFLLMKGETQSYWYHQIPKTKKTVFPRINLTFRVIYP
>NC_019780.1|WP_015230974.1|3630906_3631500_-|molybdenum-cofactor-guanylyltransferase
MIKDDLSTIILAGGYSRRMGEDKALIPISGIPLLKRTCELAQTVTSQVYIVTPWRERYQEIIPNSCQIIPETYSAEETSPHGALVGLYQGLQQVQTEWVLVLACDLPKLTRTELEFWCQQLDSMGKDQVALVAKSPPIWQPLAGFYHRQCKALFAAYLATGERSFQGFLNQHCVKELTVRDRATLFNCNTPEDLEQI

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	72309-72326	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	72484-72501	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	81081-81098	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	175535-175552	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	197139-197156	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	197189-197206	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	613408-613425	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	766968-766985	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	803761-803778	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	843470-843487	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	894674-894691	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	907597-907614	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	955246-955263	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	955290-955307	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	996287-996304	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1081814-1081831	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1081863-1081880	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1381414-1381431	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1507913-1507930	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1674853-1674870	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1732214-1732231	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1733551-1733568	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1737410-1737427	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1763969-1763986	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1845719-1845736	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1956166-1956183	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1956208-1956225	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2017173-2017190	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2362402-2362419	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2445805-2445822	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2541102-2541119	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2642507-2642524	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2642549-2642566	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2642591-2642608	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2735949-2735966	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2758153-2758170	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2758240-2758257	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2791307-2791324	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2801875-2801892	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2995640-2995657	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3009419-3009436	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3109668-3109685	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3445845-3445862	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3456948-3456965	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3482987-3483004	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3689403-3689420	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3779975-3779992	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3780058-3780075	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	244123-244140	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	244166-244183	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	244209-244226	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	244259-244276	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	244336-244353	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	657668-657685	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	691453-691470	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	691509-691526	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	691565-691582	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	726498-726515	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	807368-807385	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	826707-826724	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	902061-902078	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	967132-967149	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	981563-981580	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1013736-1013753	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1042822-1042839	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1496617-1496634	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1511255-1511272	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1752288-1752305	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1856461-1856478	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1954691-1954708	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	1969113-1969130	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2096090-2096107	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2124978-2124995	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2189509-2189526	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2262425-2262442	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2327979-2327996	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2568062-2568079	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2656172-2656189	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2656227-2656244	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2664748-2664765	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2664799-2664816	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2664856-2664873	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2707469-2707486	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2858607-2858624	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3043981-3043998	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3161542-3161559	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3186107-3186124	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3186148-3186165	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3201791-3201808	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3329939-3329956	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3370438-3370455	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3416858-3416875	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3536283-3536300	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3536357-3536374	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3542321-3542338	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3598929-3598946	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3626580-3626597	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3639217-3639234	0	1.0
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	3754956-3754973	0	1.0
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822391-822424	0	1.0
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822412-822445	0	1.0
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NC_019780_6	6.1|864037|21|NC_019780|CRISPRCasFinder	864037-864057	21	NC_019780.1	865055-865075	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	464070-464097	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	822383-822410	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	979569-979596	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1009796-1009823	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1843309-1843336	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1896029-1896056	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3109908-3109935	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3109964-3109991	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3336879-3336906	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3456893-3456920	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3465303-3465330	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3567798-3567825	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3567826-3567853	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3567861-3567888	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3567924-3567951	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3693308-3693335	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	65546-65573	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	203599-203626	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	594370-594397	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	818159-818186	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	843187-843214	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1088526-1088553	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1354494-1354521	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1441394-1441421	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1717755-1717782	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1763730-1763757	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1843057-1843084	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1856131-1856158	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1911990-1912017	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1971535-1971562	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	1996273-1996300	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2058892-2058919	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2252797-2252824	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2410393-2410420	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2649412-2649439	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2797979-2798006	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798042-2798069	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3023027-3023054	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3023188-3023215	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3026940-3026967	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3452400-3452427	0	1.0
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3509491-3509518	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	948307-948327	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1309322-1309342	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2016921-2016941	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2327926-2327946	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2380854-2380874	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2565575-2565595	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3335071-3335091	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3664640-3664660	0	1.0
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3744893-3744913	0	1.0
NC_019780_15	15.1|1420013|46|NC_019780|CRISPRCasFinder	1420013-1420058	46	NC_019780.1	1419804-1419849	0	1.0
NC_019780_18	18.1|1496355|56|NC_019780|CRISPRCasFinder	1496355-1496410	56	NC_019780.1	1496441-1496496	0	1.0
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3100823-3100844	0	1.0
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	1678907-1678928	0	1.0
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	2222827-2222848	0	1.0
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	2405716-2405737	0	1.0
NC_019780_30	30.1|2589268|42|NC_019780|CRISPRCasFinder	2589268-2589309	42	NC_019780.1	3779839-3779880	0	1.0
NC_019780_32	32.1|2656388|38|NC_019780|CRISPRCasFinder	2656388-2656425	38	NC_019780.1	2486210-2486247	0	1.0
NC_019780_37	37.2|2871958|18|NC_019780|CRT	2871958-2871975	18	NC_019780.1	2871874-2871891	0	1.0
NC_019780_37	37.4|2872042|18|NC_019780|CRT	2872042-2872059	18	NC_019780.1	2871874-2871891	0	1.0
NC_019780_37	37.5|2872079|18|NC_019780|CRT	2872079-2872096	18	NC_019780.1	2871874-2871891	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	1042861-1042885	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	1309339-1309363	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	1309360-1309384	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	1354525-1354549	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	1721907-1721931	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2013877-2013901	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2013898-2013922	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2443376-2443400	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2565557-2565581	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3023100-3023124	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3023121-3023145	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3023142-3023166	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3023163-3023187	0	1.0
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3335050-3335074	0	1.0
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NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	457922-457939	1	0.944
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	561200-561217	1	0.944
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	561264-561281	1	0.944
NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	697597-697614	1	0.944
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NC_019780_2	2.2|302306|18|NC_019780|CRISPRCasFinder	302306-302323	18	NC_019780.1	2121826-2121843	1	0.944
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NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798056-2798083	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798063-2798090	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798098-2798125	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2858715-2858742	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2858722-2858749	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3023020-3023047	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3023069-3023096	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3023195-3023222	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066649-3066676	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066698-3066725	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066705-3066732	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066712-3066739	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3100307-3100334	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3100377-3100404	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3316725-3316752	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3509463-3509490	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3509477-3509504	1	0.964
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3715227-3715254	1	0.964
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3664465-3664485	1	0.952
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3664479-3664499	1	0.952
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3664605-3664625	1	0.952
NC_019780_12	12.1|1310155|33|NC_019780|CRISPRCasFinder	1310155-1310187	33	NC_019780.1	1333425-1333457	1	0.97
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	948349-948370	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3012133-3012154	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3247016-3247037	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3612943-3612964	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	729022-729043	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	1037991-1038012	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	2335493-2335514	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3065800-3065821	1	0.955
NC_019780_23	23.1|1721942|22|NC_019780|CRISPRCasFinder	1721942-1721963	22	NC_019780.1	3196438-3196459	1	0.955
NC_019780_30	30.1|2589268|42|NC_019780|CRISPRCasFinder	2589268-2589309	42	NC_019780.1	25483-25524	1	0.976
NC_019780_36	36.1|2831965|45|NC_019780|CRISPRCasFinder	2831965-2832009	45	NC_019780.1	3373607-3373651	1	0.978
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2016903-2016927	1	0.96
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	2380868-2380892	1	0.96
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3664521-3664545	1	0.96
NC_019780_48	48.1|3465261|25|NC_019780|CRISPRCasFinder	3465261-3465285	25	NC_019780.1	3664619-3664643	1	0.96
NC_019780_50	50.1|3622601|47|NC_019780|CRISPRCasFinder	3622601-3622647	47	NC_019780.1	3622920-3622966	1	0.979
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	59966-59999	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	63182-63215	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	82878-82911	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	82892-82925	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	82906-82939	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	82913-82946	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	464064-464097	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	464078-464111	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	464092-464125	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	464106-464139	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	626904-626937	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	626911-626944	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	666102-666135	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822377-822410	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822384-822417	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822405-822438	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822433-822466	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	822440-822473	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	979556-979589	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	979563-979596	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	979577-979610	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1009783-1009816	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1009790-1009823	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1009797-1009830	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1009811-1009844	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1214762-1214795	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1574073-1574106	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1674792-1674825	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1721972-1722005	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1843268-1843301	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1843296-1843329	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1843303-1843336	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1884457-1884490	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1884464-1884497	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1884478-1884511	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1884499-1884532	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	1993630-1993663	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2032957-2032990	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2032971-2033004	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2032999-2033032	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2033013-2033046	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2033020-2033053	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2033034-2033067	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2380778-2380811	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2380799-2380832	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2380806-2380839	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2380820-2380853	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2887192-2887225	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	2887199-2887232	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109734-3109767	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109783-3109816	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109839-3109872	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109867-3109900	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109902-3109935	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109909-3109942	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109930-3109963	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109944-3109977	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3109958-3109991	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3336873-3336906	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3336880-3336913	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3336901-3336934	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3336908-3336941	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3456859-3456892	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3456873-3456906	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3456887-3456920	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3456894-3456927	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3456908-3456941	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3567792-3567825	2	0.941
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NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3693316-3693349	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3693323-3693356	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3693330-3693363	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	3731920-3731953	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	75432-75465	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	75439-75472	2	0.941
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_019780.1	75446-75479	2	0.941
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NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798028-2798055	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798035-2798062	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2798105-2798132	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2858673-2858700	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2858708-2858735	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2925638-2925665	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2948384-2948411	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2948391-2948418	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	2948398-2948425	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3026926-3026953	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3026933-3026960	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066635-3066662	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066684-3066711	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066831-3066858	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066845-3066872	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3066852-3066879	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3100321-3100348	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3509449-3509476	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3509484-3509511	2	0.929
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_019780.1	3715262-3715289	2	0.929
NC_019780_12	12.1|1310155|33|NC_019780|CRISPRCasFinder	1310155-1310187	33	NC_019780.1	1613162-1613194	2	0.939
NC_019780_19	19.1|1527621|55|NC_019780|CRISPRCasFinder	1527621-1527675	55	NC_019780.1	3183176-3183230	2	0.964
NC_019780_36	36.1|2831965|45|NC_019780|CRISPRCasFinder	2831965-2832009	45	NC_019780.1	2078835-2078879	2	0.956
NC_019780_36	36.1|2831965|45|NC_019780|CRISPRCasFinder	2831965-2832009	45	NC_019780.1	2503054-2503098	2	0.956
NC_019780_27	27.1|2010607|63|NC_019780|CRISPRCasFinder	2010607-2010669	63	NC_019780.1	2010482-2010544	4	0.937
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	652283-652303	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	722062-722082	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	827439-827459	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	948315-948335	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	967085-967105	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	988330-988350	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1187323-1187343	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1309314-1309334	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1577576-1577596	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1843331-1843351	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	1845762-1845782	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2013866-2013886	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2016913-2016933	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2067273-2067293	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2380862-2380882	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2380883-2380903	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2565546-2565566	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	2948355-2948375	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3018382-3018402	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3023089-3023109	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3288787-3288807	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3333820-3333840	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3664725-3664745	7	0.667
NC_019780_10	10.2|948265|21|NC_019780|CRISPRCasFinder	948265-948285	21	NC_019780.1	3715247-3715267	7	0.667

1. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 72309-72326, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

2. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 72484-72501, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

3. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 81081-81098, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

4. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 175535-175552, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

5. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 197139-197156, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

6. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 197189-197206, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

7. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 613408-613425, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

8. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 766968-766985, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

9. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 803761-803778, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

10. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 843470-843487, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

11. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 894674-894691, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

12. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 907597-907614, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

13. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 955246-955263, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

14. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 955290-955307, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

15. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 996287-996304, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

16. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1081814-1081831, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

17. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1081863-1081880, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

18. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1381414-1381431, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

19. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1507913-1507930, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

20. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1674853-1674870, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

21. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1732214-1732231, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

22. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1733551-1733568, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

23. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1737410-1737427, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

24. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1763969-1763986, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

25. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1845719-1845736, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

26. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1956166-1956183, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

27. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1956208-1956225, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

28. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2017173-2017190, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

29. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2362402-2362419, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

30. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2445805-2445822, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

31. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2541102-2541119, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

32. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2642507-2642524, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

33. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2642549-2642566, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

34. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2642591-2642608, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

35. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2735949-2735966, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

36. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2758153-2758170, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

37. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2758240-2758257, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

38. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2791307-2791324, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

39. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2801875-2801892, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

40. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2995640-2995657, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

41. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3009419-3009436, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

42. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3109668-3109685, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

43. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3445845-3445862, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

44. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3456948-3456965, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

45. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3482987-3483004, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

46. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3689403-3689420, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

47. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3779975-3779992, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

48. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3780058-3780075, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

49. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 244123-244140, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

50. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 244166-244183, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

51. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 244209-244226, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

52. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 244259-244276, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

53. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 244336-244353, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

54. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 657668-657685, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

55. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691453-691470, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

56. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691509-691526, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

57. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691565-691582, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

58. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 726498-726515, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

59. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 807368-807385, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

60. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 826707-826724, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

61. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 902061-902078, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

62. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 967132-967149, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

63. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 981563-981580, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

64. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1013736-1013753, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

65. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1042822-1042839, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

66. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1496617-1496634, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

67. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1511255-1511272, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

68. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1752288-1752305, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

69. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1856461-1856478, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

70. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1954691-1954708, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

71. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1969113-1969130, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

72. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2096090-2096107, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

73. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2124978-2124995, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

74. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2189509-2189526, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

75. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2262425-2262442, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

76. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2327979-2327996, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

77. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2568062-2568079, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

78. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2656172-2656189, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

79. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2656227-2656244, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

80. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2664748-2664765, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

81. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2664799-2664816, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

82. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2664856-2664873, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

83. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2707469-2707486, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

84. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2858607-2858624, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

85. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3043981-3043998, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

86. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3161542-3161559, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

87. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3186107-3186124, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

88. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3186148-3186165, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

89. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3201791-3201808, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

90. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3329939-3329956, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

91. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3370438-3370455, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

92. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3416858-3416875, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

93. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3536283-3536300, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

94. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3536357-3536374, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

95. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3542321-3542338, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

96. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3598929-3598946, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

97. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3626580-3626597, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

98. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3639217-3639234, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

99. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3754956-3754973, mismatch: 0, identity: 1.0

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggtttcg	Protospacer
******************

100. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822391-822424, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

101. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822412-822445, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

102. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979465-979498, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

103. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009804-1009837, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

104. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674785-1674818, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

105. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1721965-1721998, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

106. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109825-3109858, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

107. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109860-3109893, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

108. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109916-3109949, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

109. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109937-3109970, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

110. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456845-3456878, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

111. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456866-3456899, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

112. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456901-3456934, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

113. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567806-3567839, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

114. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567834-3567867, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

115. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567869-3567902, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

116. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567890-3567923, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

117. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567960-3567993, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

118. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203585-203618, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

119. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203613-203646, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

120. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203634-203667, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

121. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1288535-1288568, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

122. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1288556-1288589, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

123. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856103-1856136, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

124. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856145-1856178, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

125. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2045030-2045063, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

126. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2252783-2252816, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

127. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2410379-2410412, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

128. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2567996-2568029, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

129. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797965-2797998, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

130. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798028-2798061, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

131. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3026926-3026959, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

132. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066845-3066878, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

133. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3509449-3509482, mismatch: 0, identity: 1.0

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaagaggcaa	Protospacer
**********************************

134. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 86564-86585, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

135. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 319116-319137, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

136. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 470018-470039, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

137. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569009-569030, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

138. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569023-569044, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

139. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569079-569100, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

140. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569093-569114, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

141. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569135-569156, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

142. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569149-569170, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

143. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586747-586768, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

144. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 697456-697477, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

145. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981697-981718, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

146. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981725-981746, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

147. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981753-981774, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

148. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981767-981788, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

149. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1732427-1732448, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

150. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908230-1908251, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

151. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150385-2150406, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

152. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150427-2150448, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

153. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189763-2189784, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

154. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189784-2189805, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

155. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189812-2189833, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

156. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189826-2189847, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

157. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2581211-2581232, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

158. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2581225-2581246, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

159. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2729802-2729823, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

160. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799435-2799456, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

161. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2813272-2813293, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

162. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2813286-2813307, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

163. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3244808-3244829, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

164. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387850-3387871, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

165. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3390872-3390893, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

166. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3573707-3573728, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

167. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3591670-3591691, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

168. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3591698-3591719, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

169. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705716-3705737, mismatch: 0, identity: 1.0

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcagtg	Protospacer
**********************

170. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 22595-22615, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

171. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 57945-57965, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

172. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 57996-58016, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

173. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 127502-127522, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

174. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 231831-231851, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

175. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 460735-460755, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

176. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 460785-460805, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

177. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 589027-589047, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

178. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 657655-657675, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

179. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 726611-726631, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

180. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 803500-803520, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

181. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 807355-807375, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

182. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 816043-816063, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

183. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 838409-838429, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

184. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 838445-838465, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

185. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 838607-838627, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

186. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 839703-839723, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

187. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1154881-1154901, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

188. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1155648-1155668, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

189. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1203299-1203319, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

190. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1381369-1381389, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

191. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1383396-1383416, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

192. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1396189-1396209, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

193. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1396231-1396251, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

194. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1396273-1396293, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

195. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1396315-1396335, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

196. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1496304-1496324, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

197. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1507923-1507943, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

198. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1511242-1511262, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

199. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1523344-1523364, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

200. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1565317-1565337, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

201. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1613850-1613870, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

202. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1856297-1856317, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

203. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1930112-1930132, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

204. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1946591-1946611, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

205. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1968934-1968954, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

206. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1969017-1969037, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

207. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2058469-2058489, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

208. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2125041-2125061, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

209. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2289559-2289579, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

210. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2608538-2608558, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

211. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2608891-2608911, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

212. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2656159-2656179, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

213. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2656214-2656234, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

214. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2656269-2656289, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

215. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2707456-2707476, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

216. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2987736-2987756, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

217. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3126021-3126041, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

218. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3126062-3126082, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

219. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3252789-3252809, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

220. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3297862-3297882, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

221. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3297914-3297934, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

222. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3370425-3370445, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

223. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3456958-3456978, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

224. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3458531-3458551, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

225. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3573524-3573544, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

226. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3591624-3591644, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

227. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3598916-3598936, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

228. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3599091-3599111, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

229. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3616524-3616544, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

230. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3626440-3626460, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

231. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3639204-3639224, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

232. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3645255-3645275, mismatch: 0, identity: 1.0

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagtttacgaaaccc	Protospacer
*********************

233. spacer 6.1|864037|21|NC_019780|CRISPRCasFinder matches to position: 865055-865075, mismatch: 0, identity: 1.0

cctacttaataaggttgatgt	CRISPR spacer
cctacttaataaggttgatgt	Protospacer
*********************

234. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464070-464097, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

235. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822383-822410, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

236. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979569-979596, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

237. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009796-1009823, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

238. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1843309-1843336, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

239. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1896029-1896056, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

240. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109908-3109935, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

241. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109964-3109991, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

242. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3336879-3336906, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

243. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456893-3456920, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

244. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3465303-3465330, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

245. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567798-3567825, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

246. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567826-3567853, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

247. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567861-3567888, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

248. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567924-3567951, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

249. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3693308-3693335, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

250. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 65546-65573, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

251. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203599-203626, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

252. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 594370-594397, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

253. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 818159-818186, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

254. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 843187-843214, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

255. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088526-1088553, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

256. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354494-1354521, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

257. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1441394-1441421, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

258. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1717755-1717782, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

259. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1763730-1763757, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

260. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1843057-1843084, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

261. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856131-1856158, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

262. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1911990-1912017, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

263. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1971535-1971562, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

264. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1996273-1996300, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

265. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2058892-2058919, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

266. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2252797-2252824, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

267. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2410393-2410420, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

268. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2649412-2649439, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

269. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797979-2798006, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

270. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798042-2798069, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

271. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3023027-3023054, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

272. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3023188-3023215, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

273. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3026940-3026967, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

274. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3452400-3452427, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

275. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3509491-3509518, mismatch: 0, identity: 1.0

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttgcct	Protospacer
****************************

276. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 948307-948327, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

277. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1309322-1309342, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

278. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2016921-2016941, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

279. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2327926-2327946, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

280. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2380854-2380874, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

281. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2565575-2565595, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

282. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3335071-3335091, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

283. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3664640-3664660, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

284. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3744893-3744913, mismatch: 0, identity: 1.0

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttgcctaaggcaa	Protospacer
*********************

285. spacer 15.1|1420013|46|NC_019780|CRISPRCasFinder matches to position: 1419804-1419849, mismatch: 0, identity: 1.0

attagtcattggaaaaccaagaacaaaggacaaaaatgtaggttgg	CRISPR spacer
attagtcattggaaaaccaagaacaaaggacaaaaatgtaggttgg	Protospacer
**********************************************

286. spacer 18.1|1496355|56|NC_019780|CRISPRCasFinder matches to position: 1496441-1496496, mismatch: 0, identity: 1.0

aggcaagaggcaagttgccttagggttgattgattggtagcaagtaggttgggtga	CRISPR spacer
aggcaagaggcaagttgccttagggttgattgattggtagcaagtaggttgggtga	Protospacer
********************************************************

287. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3100823-3100844, mismatch: 0, identity: 1.0

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagccttttgcct	Protospacer
**********************

288. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 1678907-1678928, mismatch: 0, identity: 1.0

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagccttttgcct	Protospacer
**********************

289. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 2222827-2222848, mismatch: 0, identity: 1.0

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagccttttgcct	Protospacer
**********************

290. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 2405716-2405737, mismatch: 0, identity: 1.0

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagccttttgcct	Protospacer
**********************

291. spacer 30.1|2589268|42|NC_019780|CRISPRCasFinder matches to position: 3779839-3779880, mismatch: 0, identity: 1.0

attactggtcactgggagacgttccatggaacgtctctacat	CRISPR spacer
attactggtcactgggagacgttccatggaacgtctctacat	Protospacer
******************************************

292. spacer 32.1|2656388|38|NC_019780|CRISPRCasFinder matches to position: 2486210-2486247, mismatch: 0, identity: 1.0

ataaaagtaggcccttgtggagtttacgaaacccaaca	CRISPR spacer
ataaaagtaggcccttgtggagtttacgaaacccaaca	Protospacer
**************************************

293. spacer 37.2|2871958|18|NC_019780|CRT matches to position: 2871874-2871891, mismatch: 0, identity: 1.0

caagtcaaagcgtaggtt	CRISPR spacer
caagtcaaagcgtaggtt	Protospacer
******************

294. spacer 37.4|2872042|18|NC_019780|CRT matches to position: 2871874-2871891, mismatch: 0, identity: 1.0

caagtcaaagcgtaggtt	CRISPR spacer
caagtcaaagcgtaggtt	Protospacer
******************

295. spacer 37.5|2872079|18|NC_019780|CRT matches to position: 2871874-2871891, mismatch: 0, identity: 1.0

caagtcaaagcgtaggtt	CRISPR spacer
caagtcaaagcgtaggtt	Protospacer
******************

296. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 1042861-1042885, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

297. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 1309339-1309363, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

298. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 1309360-1309384, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

299. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 1354525-1354549, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

300. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 1721907-1721931, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

301. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2013877-2013901, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

302. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2013898-2013922, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

303. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2443376-2443400, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

304. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2565557-2565581, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

305. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3023100-3023124, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

306. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3023121-3023145, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

307. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3023142-3023166, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

308. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3023163-3023187, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

309. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3335050-3335074, mismatch: 0, identity: 1.0

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttgcctaagg	Protospacer
*************************

310. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 22482-22499, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggcttcg	Protospacer
*************.****

311. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 22543-22560, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

312. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 22585-22602, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

313. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 137940-137957, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

314. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 237207-237224, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

315. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 237252-237269, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

316. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 237346-237363, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

317. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 457922-457939, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

318. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 561200-561217, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

319. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 561264-561281, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

320. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 697597-697614, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

321. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 762174-762191, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttacg	Protospacer
*************** **

322. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1203289-1203306, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

323. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1222386-1222403, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatgggtgttgggtttcg	Protospacer
*** **************

324. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1277826-1277843, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

325. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1417905-1417922, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

326. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1541137-1541154, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

327. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1541393-1541410, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

328. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1543318-1543335, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

329. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1646826-1646843, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

330. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1735902-1735919, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

331. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1827505-1827522, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

332. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1877249-1877266, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

333. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1908182-1908199, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

334. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1908424-1908441, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

335. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2121826-2121843, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

336. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2152236-2152253, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttgcg	Protospacer
*************** **

337. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2343512-2343529, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

338. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2343641-2343658, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

339. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2402921-2402938, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

340. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2445953-2445970, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

341. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2521949-2521966, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

342. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2551352-2551369, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

343. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2553283-2553300, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttacg	Protospacer
*************** **

344. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2553332-2553349, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttacg	Protospacer
*************** **

345. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2744922-2744939, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttacg	Protospacer
*************** **

346. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2758024-2758041, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

347. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2935277-2935294, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

348. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3126011-3126028, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

349. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3126052-3126069, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

350. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3183228-3183245, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

351. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3215195-3215212, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggcgttgggtttcg	Protospacer
******.***********

352. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3297904-3297921, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

353. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3482870-3482887, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggcgttgggtttcg	Protospacer
******.***********

354. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3483014-3483031, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggcgttgggtttcg	Protospacer
******.***********

355. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3590232-3590249, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

356. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 207114-207131, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

357. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 319003-319020, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

358. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 319159-319176, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

359. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691397-691414, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

360. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691621-691638, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

361. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 691677-691694, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

362. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 801183-801200, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

363. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 801356-801373, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

364. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 816056-816073, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

365. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 963149-963166, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

366. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 963371-963388, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

367. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1155661-1155678, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

368. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1232518-1232535, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatgggtgttgggtttcg	Protospacer
*** **************

369. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1415299-1415316, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

370. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1415345-1415362, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

371. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1523357-1523374, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

372. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1575695-1575712, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

373. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1575870-1575887, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatgggtgttgggtttcg	Protospacer
*** **************

374. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1700984-1701001, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

375. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1701034-1701051, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

376. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1741527-1741544, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatttgtgttgggtttcg	Protospacer
**** *************

377. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1755536-1755553, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttgcg	Protospacer
*************** **

378. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1851675-1851692, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatcggtgttgggtttcg	Protospacer
***.**************

379. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 1931475-1931492, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

380. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2153898-2153915, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

381. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2156712-2156729, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

382. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2355749-2355766, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattggtgttgggttgcg	Protospacer
*************** **

383. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 2358271-2358288, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatcggtgttgggtttcg	Protospacer
***.**************

384. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3034922-3034939, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

385. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3115698-3115715, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

386. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3164113-3164130, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

387. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3400002-3400019, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgttgttgggtttcg	Protospacer
***** ************

388. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3536568-3536585, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

389. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3542256-3542273, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattagtgttgggtttcg	Protospacer
****.*************

390. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3550136-3550153, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gatcggtgttgggtttcg	Protospacer
***.**************

391. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3685571-3685588, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgatgttgggtttcg	Protospacer
*****.************

392. spacer 2.2|302306|18|NC_019780|CRISPRCasFinder matches to position: 3705786-3705803, mismatch: 1, identity: 0.944

gattggtgttgggtttcg	CRISPR spacer
gattgctgttgggtttcg	Protospacer
***** ************

393. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 59973-60006, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

394. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 63196-63229, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

395. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82857-82890, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

396. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82871-82904, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

397. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464099-464132, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

398. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464113-464146, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

399. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464120-464153, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

400. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464127-464160, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

401. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464134-464167, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

402. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 626918-626951, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

403. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 628142-628175, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

404. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 666088-666121, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

405. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822447-822480, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

406. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822468-822501, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggtaaaaggcaagaggcaa	Protospacer
*****************.****************

407. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979486-979519, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

408. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979493-979526, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

409. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979514-979547, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

410. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979521-979554, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

411. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979542-979575, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

412. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979549-979582, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

413. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009727-1009760, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

414. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009741-1009774, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

415. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009755-1009788, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

416. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009769-1009802, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

417. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009776-1009809, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

418. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1191270-1191303, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

419. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1199350-1199383, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

420. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1493585-1493618, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

421. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1574066-1574099, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

422. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674799-1674832, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

423. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674806-1674839, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

424. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674813-1674846, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

425. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674896-1674929, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

426. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843261-1843294, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

427. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843282-1843315, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

428. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843289-1843322, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

429. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2032943-2032976, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

430. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2032978-2033011, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

431. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2887206-2887239, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

432. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2995678-2995711, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

433. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3023826-3023859, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

434. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109713-3109746, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

435. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109727-3109760, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

436. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109748-3109781, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

437. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109762-3109795, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

438. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109776-3109809, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

439. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109797-3109830, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

440. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109811-3109844, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

441. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109846-3109879, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

442. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109874-3109907, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

443. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109881-3109914, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

444. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109888-3109921, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

445. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109895-3109928, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

446. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109951-3109984, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

447. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3336887-3336920, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

448. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3342021-3342054, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

449. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456880-3456913, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

450. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567848-3567881, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

451. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567904-3567937, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

452. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567911-3567944, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

453. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567932-3567965, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

454. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567946-3567979, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

455. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3731934-3731967, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

456. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3731941-3731974, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

457. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 65532-65565, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

458. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75404-75437, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

459. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75418-75451, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

460. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75467-75500, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

461. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203648-203681, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

462. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203662-203695, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

463. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 305083-305116, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

464. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 305090-305123, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

465. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 901940-901973, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

466. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1018367-1018400, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

467. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1018374-1018407, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

468. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042707-1042740, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

469. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042728-1042761, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

470. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042735-1042768, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

471. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088533-1088566, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

472. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088540-1088573, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

473. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088547-1088580, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

474. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088554-1088587, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

475. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088561-1088594, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

476. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088568-1088601, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

477. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1288570-1288603, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

478. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1354550-1354583, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

479. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1354557-1354590, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

480. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1354564-1354597, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

481. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1354571-1354604, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

482. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1354578-1354611, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

483. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400719-1400752, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

484. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400733-1400766, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

485. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400747-1400780, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

486. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400768-1400801, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

487. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400782-1400815, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

488. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441408-1441441, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

489. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441415-1441448, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

490. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441436-1441469, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

491. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441457-1441490, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

492. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856089-1856122, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

493. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856117-1856150, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

494. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1996245-1996278, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

495. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1996259-1996292, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

496. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2045051-2045084, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

497. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2246779-2246812, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

498. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2252804-2252837, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

499. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2252818-2252851, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggtaagaggcaa	Protospacer
************************.*********

500. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2443324-2443357, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

501. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2443338-2443371, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

502. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2568093-2568126, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

503. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2568100-2568133, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

504. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2596318-2596351, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

505. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2596332-2596365, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

506. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2597439-2597472, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

507. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2597453-2597486, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

508. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2597467-2597500, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

509. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2597481-2597514, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

510. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797944-2797977, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

511. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797951-2797984, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

512. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797986-2798019, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

513. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797993-2798026, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

514. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798000-2798033, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

515. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798007-2798040, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

516. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798014-2798047, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

517. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798049-2798082, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

518. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798056-2798089, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

519. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798063-2798096, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

520. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798077-2798110, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

521. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798084-2798117, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaagaggcaa	Protospacer
*************.********************

522. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798098-2798131, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

523. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2948370-2948403, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

524. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3023195-3023228, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

525. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066663-3066696, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaaaaggcaaaaggcaa	Protospacer
***************************.******

526. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066705-3066738, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaagaggcaa	Protospacer
********************.*************

527. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3509463-3509496, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

528. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3509477-3509510, mismatch: 1, identity: 0.971

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
******.***************************

529. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 33382-33403, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

530. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 43949-43970, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

531. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 44098-44119, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

532. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 44147-44168, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

533. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 77308-77329, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

534. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 111954-111975, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

535. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 142409-142430, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

536. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 142555-142576, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

537. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 142562-142583, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

538. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403787-403808, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

539. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403794-403815, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

540. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403801-403822, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

541. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403808-403829, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

542. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403822-403843, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

543. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403843-403864, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

544. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419027-419048, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

545. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419048-419069, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

546. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430197-430218, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

547. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430211-430232, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

548. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430225-430246, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

549. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 470032-470053, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccggtgatcagtg	Protospacer
***********.**********

550. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 470053-470074, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgatcagtg	Protospacer
*******.**************

551. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 547951-547972, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

552. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 547965-547986, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

553. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 548066-548087, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

554. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 548080-548101, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

555. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569041-569062, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcactg	Protospacer
******************* **

556. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569107-569128, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgatcagtg	Protospacer
*******.**************

557. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586705-586726, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

558. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586733-586754, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

559. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586761-586782, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

560. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586810-586831, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

561. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586824-586845, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

562. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 697470-697491, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccaatgatcagtg	Protospacer
************.*********

563. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 730984-731005, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

564. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 911558-911579, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgatcagtg	Protospacer
*******.**************

565. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974754-974775, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

566. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974775-974796, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

567. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974796-974817, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

568. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974831-974852, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

569. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981711-981732, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

570. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1068504-1068525, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

571. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122155-1122176, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

572. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122353-1122374, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

573. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122402-1122423, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

574. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130351-1130372, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

575. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130386-1130407, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

576. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130428-1130449, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

577. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162430-1162451, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

578. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162444-1162465, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

579. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162458-1162479, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

580. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1185936-1185957, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

581. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1186081-1186102, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

582. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1203250-1203271, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

583. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1280083-1280104, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

584. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1293951-1293972, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

585. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1293965-1293986, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

586. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1296696-1296717, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

587. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1296703-1296724, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

588. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1296717-1296738, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

589. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1296731-1296752, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

590. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1323544-1323565, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

591. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1417788-1417809, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

592. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1532755-1532776, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

593. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1532869-1532890, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

594. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669836-1669857, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

595. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669850-1669871, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

596. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669864-1669885, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

597. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1690803-1690824, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

598. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1690844-1690865, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

599. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1690858-1690879, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

600. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1732441-1732462, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

601. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1755669-1755690, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

602. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908216-1908237, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

603. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908286-1908307, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

604. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908293-1908314, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

605. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908307-1908328, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

606. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1916836-1916857, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

607. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1916850-1916871, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

608. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1916857-1916878, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

609. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1961872-1961893, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

610. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2036329-2036350, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagttaccagtgatcagtg	Protospacer
******* **************

611. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150399-2150420, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

612. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150406-2150427, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

613. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189742-2189763, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

614. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189749-2189770, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

615. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189798-2189819, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

616. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192207-2192228, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

617. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192228-2192249, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

618. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192235-2192256, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

619. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2293111-2293132, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

620. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2293118-2293139, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

621. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389726-2389747, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

622. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389740-2389761, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

623. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389817-2389838, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

624. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389831-2389852, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

625. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425201-2425222, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

626. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425215-2425236, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

627. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425229-2425250, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

628. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425243-2425264, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

629. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425306-2425327, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

630. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2431479-2431500, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

631. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2431486-2431507, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

632. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2581197-2581218, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

633. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2729760-2729781, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

634. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2729788-2729809, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgatcagtg	Protospacer
*******.**************

635. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757865-2757886, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

636. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757872-2757893, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

637. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757886-2757907, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

638. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2786936-2786957, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

639. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2786971-2786992, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

640. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787006-2787027, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

641. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787020-2787041, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaatcagtg	Protospacer
**************.*******

642. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799307-2799328, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

643. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799365-2799386, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

644. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799379-2799400, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

645. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799393-2799414, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

646. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799407-2799428, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

647. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799421-2799442, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

648. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859032-2859053, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

649. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859160-2859181, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

650. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859281-2859302, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

651. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859409-2859430, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

652. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859537-2859558, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

653. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859665-2859686, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

654. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859794-2859815, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

655. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2860122-2860143, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

656. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2860450-2860471, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

657. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874907-2874928, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

658. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874921-2874942, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

659. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874935-2874956, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

660. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874949-2874970, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

661. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3009278-3009299, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcactg	Protospacer
******************* **

662. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3035119-3035140, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

663. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3115818-3115839, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

664. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3325154-3325175, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

665. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3334064-3334085, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

666. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3380087-3380108, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

667. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387836-3387857, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

668. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387864-3387885, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

669. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387871-3387892, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

670. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387892-3387913, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

671. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387906-3387927, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

672. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387962-3387983, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

673. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3390858-3390879, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

674. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3428483-3428504, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

675. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431630-3431651, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcagtg	Protospacer
*********.************

676. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431644-3431665, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

677. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431721-3431742, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

678. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3445704-3445725, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgatcactg	Protospacer
******************* **

679. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3573693-3573714, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

680. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3581352-3581373, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

681. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3591656-3591677, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

682. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3591684-3591705, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccaatgatcagtg	Protospacer
************.*********

683. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3698866-3698887, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

684. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705646-3705667, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

685. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705660-3705681, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

686. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705674-3705695, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

687. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705688-3705709, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccagtg	Protospacer
****************.*****

688. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705702-3705723, mismatch: 1, identity: 0.955

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgatcagtg	Protospacer
**.*******************

689. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 22553-22573, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

690. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 81091-81111, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

691. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 127544-127564, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggcgtttacgaaaccc	Protospacer
******* *************

692. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 244110-244130, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagttcacgaaaccc	Protospacer
***********.*********

693. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 244196-244216, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagttcacgaaaccc	Protospacer
***********.*********

694. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 244246-244266, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagttcacgaaaccc	Protospacer
***********.*********

695. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 726543-726563, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

696. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 726577-726597, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

697. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 967119-967139, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

698. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1042809-1042829, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

699. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1081824-1081844, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

700. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1081873-1081893, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

701. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1232421-1232441, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgtagtttacgaaaccc	Protospacer
****** **************

702. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1309981-1310001, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagttcacgaaaccc	Protospacer
***********.*********

703. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1496490-1496510, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

704. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1575857-1575877, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggactttacgaaaccc	Protospacer
******** ************

705. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1644532-1644552, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

706. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1646836-1646856, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

707. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1646875-1646895, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

708. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1646914-1646934, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

709. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1646992-1647012, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

710. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1674863-1674883, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

711. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1700971-1700991, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

712. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1701021-1701041, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

713. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1701071-1701091, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

714. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1791408-1791428, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

715. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1791647-1791667, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

716. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1845729-1845749, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

717. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1956176-1956196, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

718. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1956218-1956238, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

719. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1969100-1969120, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tggatggagtttacgaaaccc	Protospacer
***.*****************

720. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2121836-2121856, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

721. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2327966-2327986, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

722. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2343577-2343597, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

723. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2346023-2346043, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagttcacgaaaccc	Protospacer
***********.*********

724. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2568049-2568069, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

725. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2642517-2642537, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

726. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2642559-2642579, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

727. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2642601-2642621, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

728. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3109678-3109698, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

729. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3161529-3161549, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

730. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3418167-3418187, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

731. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3418222-3418242, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

732. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3418277-3418297, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

733. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3456805-3456825, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

734. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3645651-3645671, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

735. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3705773-3705793, mismatch: 1, identity: 0.952

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttacgaaaccc	Protospacer
******.**************

736. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 63188-63215, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

737. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 63202-63229, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

738. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 82863-82890, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

739. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464063-464090, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

740. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464077-464104, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

741. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464119-464146, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

742. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464126-464153, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

743. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464133-464160, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

744. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464140-464167, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

745. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 626903-626930, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

746. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 628141-628168, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

747. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 657926-657953, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

748. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 657969-657996, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

749. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 666080-666107, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

750. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 666094-666121, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

751. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822376-822403, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

752. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822432-822459, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

753. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 827382-827409, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

754. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979485-979512, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

755. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979513-979540, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

756. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979541-979568, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

757. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979576-979603, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

758. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009733-1009760, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

759. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009747-1009774, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

760. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009761-1009788, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

761. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1199349-1199376, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

762. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1313125-1313152, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

763. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1517963-1517990, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttgccttttgcct	Protospacer
***.************************

764. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1574065-1574092, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

765. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674805-1674832, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

766. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674812-1674839, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

767. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674819-1674846, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

768. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674902-1674929, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

769. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1993636-1993663, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

770. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2032949-2032976, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

771. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2032998-2033025, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

772. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2380777-2380804, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

773. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2887184-2887211, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttgccttttgcct	Protospacer
***.************************

774. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2887191-2887218, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

775. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2995677-2995704, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

776. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2995684-2995711, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

777. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109719-3109746, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

778. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109754-3109781, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

779. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109768-3109795, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

780. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109803-3109830, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

781. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109817-3109844, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

782. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109852-3109879, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

783. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109880-3109907, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

784. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109887-3109914, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

785. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109894-3109921, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

786. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109901-3109928, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

787. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109957-3109984, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

788. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3336872-3336899, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

789. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3336893-3336920, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

790. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3342013-3342040, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

791. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3342027-3342054, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

792. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3453269-3453296, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

793. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456837-3456864, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

794. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456886-3456913, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

795. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567791-3567818, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

796. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567854-3567881, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

797. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567910-3567937, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

798. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567917-3567944, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

799. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567938-3567965, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

800. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567952-3567979, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

801. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664703-3664730, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

802. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3693315-3693342, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

803. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 65539-65566, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

804. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 75404-75431, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

805. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 75418-75445, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

806. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203648-203675, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

807. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203662-203689, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

808. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 305083-305110, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

809. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 305090-305117, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

810. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 305097-305124, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

811. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 393120-393147, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

812. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 818166-818193, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

813. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1018367-1018394, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

814. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1018374-1018401, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

815. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1018381-1018408, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

816. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1042714-1042741, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

817. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1077064-1077091, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

818. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088533-1088560, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

819. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088540-1088567, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

820. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088547-1088574, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

821. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088554-1088581, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

822. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088561-1088588, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

823. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088568-1088595, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

824. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1088575-1088602, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

825. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1288570-1288597, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

826. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1350207-1350234, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

827. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1350214-1350241, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttgccttttgcct	Protospacer
***.************************

828. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354550-1354577, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

829. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354557-1354584, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

830. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354564-1354591, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

831. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354571-1354598, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

832. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354578-1354605, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

833. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1354585-1354612, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

834. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1400719-1400746, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

835. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1400733-1400760, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

836. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1400747-1400774, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

837. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1400782-1400809, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

838. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1441471-1441498, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

839. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1717762-1717789, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

840. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1798387-1798414, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

841. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856089-1856116, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

842. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856117-1856144, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

843. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1963016-1963043, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

844. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1996245-1996272, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

845. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1996259-1996286, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

846. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1996280-1996307, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

847. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2058899-2058926, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

848. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2246779-2246806, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

849. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2246786-2246813, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

850. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2252804-2252831, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

851. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2294960-2294987, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

852. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2328003-2328030, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

853. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2443324-2443351, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

854. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2443338-2443365, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

855. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2568093-2568120, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

856. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2568100-2568127, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

857. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2568107-2568134, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

858. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2596318-2596345, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

859. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2596332-2596359, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

860. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2596346-2596373, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

861. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2597439-2597466, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

862. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2597453-2597480, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

863. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2597467-2597494, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

864. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2597481-2597508, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

865. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2779318-2779345, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

866. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2784011-2784038, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

867. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797944-2797971, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

868. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797951-2797978, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

869. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797986-2798013, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

870. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797993-2798020, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

871. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798000-2798027, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

872. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798007-2798034, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

873. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798014-2798041, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

874. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798049-2798076, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

875. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798056-2798083, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

876. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798063-2798090, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

877. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798098-2798125, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

878. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2858715-2858742, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

879. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2858722-2858749, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcttcttgcctcttgccttttgcct	Protospacer
*****.**********************

880. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3023020-3023047, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgccttttgcct	Protospacer
**************.*************

881. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3023069-3023096, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

882. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3023195-3023222, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

883. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066649-3066676, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttacct	Protospacer
************************.***

884. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066698-3066725, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctttcgcct	Protospacer
***********************.****

885. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066705-3066732, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

886. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066712-3066739, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

887. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3100307-3100334, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

888. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3100377-3100404, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgccttttacct	Protospacer
************************.***

889. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3316725-3316752, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttgcct	Protospacer
*********************.******

890. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3509463-3509490, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

891. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3509477-3509504, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

892. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3715227-3715254, mismatch: 1, identity: 0.964

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttgcct	Protospacer
*******.********************

893. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3664465-3664485, mismatch: 1, identity: 0.952

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttacctaaggcaa	Protospacer
**********.**********

894. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3664479-3664499, mismatch: 1, identity: 0.952

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttacctaaggcaa	Protospacer
**********.**********

895. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3664605-3664625, mismatch: 1, identity: 0.952

aaggcaacttgcctaaggcaa	CRISPR spacer
aaggcaacttacctaaggcaa	Protospacer
**********.**********

896. spacer 12.1|1310155|33|NC_019780|CRISPRCasFinder matches to position: 1333425-1333457, mismatch: 1, identity: 0.97

atgttgggtttcacttcgtttcacgcaacctac	CRISPR spacer
atgttgggtttcacttcgtttcacccaacctac	Protospacer
************************ ********

897. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 948349-948370, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagccttttacct	Protospacer
******************.***

898. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3012133-3012154, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

899. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3247016-3247037, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

900. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3612943-3612964, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

901. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 729022-729043, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

902. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 1037991-1038012, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

903. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 2335493-2335514, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

904. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3065800-3065821, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

905. spacer 23.1|1721942|22|NC_019780|CRISPRCasFinder matches to position: 3196438-3196459, mismatch: 1, identity: 0.955

tttgcatgcaagccttttgcct	CRISPR spacer
tttgcatgcaagcctcttgcct	Protospacer
***************.******

906. spacer 30.1|2589268|42|NC_019780|CRISPRCasFinder matches to position: 25483-25524, mismatch: 1, identity: 0.976

attactggtcactgggagacgttccatggaacgtctctacat	CRISPR spacer
attactgatcactgggagacgttccatggaacgtctctacat	Protospacer
*******.**********************************

907. spacer 36.1|2831965|45|NC_019780|CRISPRCasFinder matches to position: 3373607-3373651, mismatch: 1, identity: 0.978

aataccaatttagaaagtagatgttacatcttgtagggtgggcaa	CRISPR spacer
aataccaatttaaaaagtagatgttacatcttgtagggtgggcaa	Protospacer
************.********************************

908. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2016903-2016927, mismatch: 1, identity: 0.96

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgccttttgcctaagg	Protospacer
**************.**********

909. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 2380868-2380892, mismatch: 1, identity: 0.96

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgccttttgcctaagg	Protospacer
**************.**********

910. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3664521-3664545, mismatch: 1, identity: 0.96

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgcctcttacctaagg	Protospacer
*****************.*******

911. spacer 48.1|3465261|25|NC_019780|CRISPRCasFinder matches to position: 3664619-3664643, mismatch: 1, identity: 0.96

aaggcaacttgcctcttgcctaagg	CRISPR spacer
aaggcaacttgccttttgcctaagg	Protospacer
**************.**********

912. spacer 50.1|3622601|47|NC_019780|CRISPRCasFinder matches to position: 3622920-3622966, mismatch: 1, identity: 0.979

ggggcttttcttcggtggggtgaaatgaaatgaaacccaacattaga	CRISPR spacer
ggggcttttcttcggtggggtgaaatgaaatcaaacccaacattaga	Protospacer
******************************* ***************

913. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 59966-59999, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

914. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 63182-63215, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggtaa	Protospacer
******.************************.**

915. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82878-82911, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

916. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82892-82925, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

917. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82906-82939, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

918. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 82913-82946, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

919. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464064-464097, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

920. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464078-464111, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

921. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464092-464125, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

922. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 464106-464139, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

923. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 626904-626937, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

924. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 626911-626944, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

925. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 666102-666135, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

926. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822377-822410, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

927. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822384-822417, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

928. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822405-822438, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

929. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822433-822466, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

930. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 822440-822473, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

931. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979556-979589, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

932. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979563-979596, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

933. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 979577-979610, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

934. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009783-1009816, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

935. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009790-1009823, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

936. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009797-1009830, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

937. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1009811-1009844, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

938. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1214762-1214795, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

939. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1574073-1574106, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

940. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1674792-1674825, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

941. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1721972-1722005, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

942. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843268-1843301, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

943. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843296-1843329, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

944. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1843303-1843336, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

945. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1884457-1884490, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

946. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1884464-1884497, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

947. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1884478-1884511, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

948. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1884499-1884532, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

949. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1993630-1993663, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggtaa	Protospacer
******.************************.**

950. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2032957-2032990, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

951. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2032971-2033004, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

952. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2032999-2033032, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

953. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2033013-2033046, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

954. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2033020-2033053, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

955. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2033034-2033067, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

956. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2380778-2380811, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

957. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2380799-2380832, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

958. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2380806-2380839, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

959. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2380820-2380853, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

960. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2887192-2887225, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

961. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2887199-2887232, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

962. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109734-3109767, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

963. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109783-3109816, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

964. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109839-3109872, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

965. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109867-3109900, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

966. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109902-3109935, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

967. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109909-3109942, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

968. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109930-3109963, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

969. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109944-3109977, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

970. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3109958-3109991, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

971. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3336873-3336906, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

972. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3336880-3336913, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

973. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3336901-3336934, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

974. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3336908-3336941, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

975. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456859-3456892, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

976. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456873-3456906, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

977. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456887-3456920, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

978. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456894-3456927, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

979. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3456908-3456941, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

980. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567792-3567825, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

981. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567799-3567832, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

982. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567813-3567846, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

983. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567820-3567853, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

984. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567827-3567860, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

985. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567841-3567874, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

986. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567855-3567888, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

987. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567862-3567895, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

988. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567883-3567916, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

989. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567897-3567930, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

990. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567918-3567951, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

991. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3567925-3567958, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

992. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3664662-3664695, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggtaaaaggcaagaggcaaaaggcaagaggcaa	Protospacer
***.**.***************************

993. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3693316-3693349, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

994. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3693323-3693356, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

995. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3693330-3693363, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

996. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3731920-3731953, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

997. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75432-75465, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

998. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75439-75472, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

999. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75446-75479, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

1000. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 75460-75493, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1001. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203592-203625, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1002. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203599-203632, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1003. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203606-203639, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1004. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 203620-203653, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1005. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 818159-818192, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1006. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 843187-843220, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1007. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 843194-843227, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1008. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042700-1042733, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1009. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042749-1042782, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1010. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042756-1042789, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

1011. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1042763-1042796, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

1012. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1077064-1077097, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggtaa	Protospacer
******.************************.**

1013. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1088526-1088559, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1014. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1288542-1288575, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1015. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400761-1400794, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1016. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1400796-1400829, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1017. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441394-1441427, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1018. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441401-1441434, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1019. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441429-1441462, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1020. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1441450-1441483, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1021. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1717755-1717788, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1022. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856096-1856129, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1023. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856124-1856157, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1024. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856131-1856164, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1025. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1856138-1856171, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1026. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1996266-1996299, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1027. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 1996273-1996306, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1028. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2045023-2045056, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1029. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2045037-2045070, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1030. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2045058-2045091, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

1031. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2058892-2058925, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1032. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2252790-2252823, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1033. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2252797-2252830, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1034. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2410372-2410405, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1035. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2410386-2410419, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1036. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2568086-2568119, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
agccaagaggcaagaggcaagaggcaagaggcaa	Protospacer
** *****************.*************

1037. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797958-2797991, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1038. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797972-2798005, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1039. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2797979-2798012, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1040. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798021-2798054, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1041. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798035-2798068, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1042. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798042-2798075, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1043. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2798070-2798103, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1044. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2858673-2858706, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

1045. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2858687-2858720, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaaaaggcaa	Protospacer
******.********************.******

1046. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2858694-2858727, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

1047. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2858708-2858741, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaaaaggcaaaaggcaagaggcaa	Protospacer
******.******.********************

1048. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 2948377-2948410, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaaaaggcaaaaggcaa	Protospacer
*************.*************.******

1049. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3023188-3023221, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaagaggcaagaggcaa	Protospacer
******.*************.*************

1050. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3026933-3026966, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1051. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066635-3066668, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggtaaaaggcaagaggcaa	Protospacer
******.**********.****************

1052. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066656-3066689, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaagaggcaaaaggcaa	Protospacer
********************.******.******

1053. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066684-3066717, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcgaaaggcaagaggcaa	Protospacer
******.***********.***************

1054. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066831-3066864, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1055. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066852-3066885, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1056. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3066866-3066899, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaagaggcaatatgcaagaggcaa	Protospacer
******************** * ***********

1057. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3100307-3100340, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaaaaggcaagaggcaaaaggcaagaggtaa	Protospacer
******.************************.**

1058. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to position: 3509484-3509517, mismatch: 2, identity: 0.941

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
aggcaagaggcaaaaggcaagaggcaagaggcaa	Protospacer
*************.******.*************

1059. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 33389-33410, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1060. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 33396-33417, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1061. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 33410-33431, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1062. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 43907-43928, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1063. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 44105-44126, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1064. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 72347-72368, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1065. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 77301-77322, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1066. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 77315-77336, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1067. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 77329-77350, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1068. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 111968-111989, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccaatg	Protospacer
****************.**.**

1069. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 142395-142416, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtaatcagtg	Protospacer
*********.****.*******

1070. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 142576-142597, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtggccagtgatcagtg	Protospacer
**.*****.*************

1071. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 175496-175517, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1072. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 175503-175524, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1073. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 175510-175531, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1074. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 212301-212322, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgaccagtg	Protospacer
*******.********.*****

1075. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403815-403836, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1076. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403829-403850, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1077. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 403836-403857, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1078. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 418992-419013, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1079. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419013-419034, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1080. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419034-419055, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1081. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419041-419062, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1082. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 419055-419076, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gagcagtgaccagtgaccagtg	Protospacer
** *************.*****

1083. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430204-430225, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1084. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430232-430253, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1085. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430267-430288, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1086. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430302-430323, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1087. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 430309-430330, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1088. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431306-431327, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1089. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431313-431334, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1090. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431348-431369, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1091. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431355-431376, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1092. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431362-431383, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1093. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431369-431390, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1094. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431376-431397, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1095. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431383-431404, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1096. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431390-431411, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1097. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431397-431418, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1098. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431404-431425, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1099. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431411-431432, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1100. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431418-431439, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1101. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431453-431474, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1102. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431460-431481, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1103. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 431467-431488, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1104. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 499774-499795, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaacagtg	Protospacer
**.************* *****

1105. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 499781-499802, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1106. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 499788-499809, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1107. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 499795-499816, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaacagtgaccagtgaccagtg	Protospacer
** *************.*****

1108. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 536789-536810, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1109. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 536796-536817, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1110. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 547944-547965, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1111. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 548059-548080, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1112. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 569051-569072, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgatcactg	Protospacer
*******.*********** **

1113. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586712-586733, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1114. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586719-586740, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1115. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586726-586747, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1116. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586768-586789, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1117. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586775-586796, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1118. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586782-586803, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1119. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586789-586810, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1120. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586796-586817, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1121. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586803-586824, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1122. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586831-586852, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1123. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 586838-586859, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1124. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655243-655264, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1125. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655250-655271, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1126. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655257-655278, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1127. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655264-655285, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1128. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655271-655292, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1129. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655278-655299, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1130. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655285-655306, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1131. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 655292-655313, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1132. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 730991-731012, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1133. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 766852-766873, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccggtgaccagtg	Protospacer
***********.****.*****

1134. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 766866-766887, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1135. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 803654-803675, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1136. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 807389-807410, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1137. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 816287-816308, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1138. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838524-838545, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1139. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838538-838559, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccggtgaccagtg	Protospacer
***********.****.*****

1140. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838559-838580, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1141. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838573-838594, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccggtgaccagtg	Protospacer
***********.****.*****

1142. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838693-838714, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1143. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 838707-838728, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccggtgaccagtg	Protospacer
***********.****.*****

1144. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 911607-911628, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1145. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 911721-911742, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1146. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 911728-911749, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1147. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974747-974768, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1148. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974761-974782, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1149. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974768-974789, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1150. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974810-974831, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1151. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 974845-974866, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaatcagtgatcagtg	Protospacer
*******.*.************

1152. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981690-981711, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1153. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981704-981725, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1154. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981718-981739, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1155. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 981739-981760, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtggtcagtgatcagtg	Protospacer
********..************

1156. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 995308-995329, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1157. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1018783-1018804, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1158. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122162-1122183, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1159. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122204-1122225, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1160. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122360-1122381, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1161. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1122409-1122430, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1162. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130337-1130358, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1163. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130344-1130365, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1164. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130358-1130379, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1165. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130365-1130386, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1166. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130372-1130393, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1167. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130379-1130400, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1168. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1130393-1130414, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1169. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162437-1162458, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1170. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162465-1162486, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1171. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1162472-1162493, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1172. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1185871-1185892, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1173. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1203243-1203264, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1174. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1203264-1203285, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagttaccagtgatcagtg	Protospacer
**.**** **************

1175. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1296724-1296745, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1176. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1419667-1419688, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1177. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1419882-1419903, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1178. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1437640-1437661, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1179. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1453758-1453779, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1180. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456662-1456683, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcggtgaccagtgaccagtg	Protospacer
****.***********.*****

1181. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456669-1456690, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1182. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456676-1456697, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1183. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456790-1456811, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1184. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456904-1456925, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1185. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1456911-1456932, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1186. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1457053-1457074, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1187. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1531598-1531619, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1188. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1531605-1531626, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1189. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1531612-1531633, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1190. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1573903-1573924, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1191. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669829-1669850, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1192. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669843-1669864, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1193. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669857-1669878, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1194. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669878-1669899, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtggccagtgatcagtg	Protospacer
**.*****.*************

1195. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669913-1669934, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1196. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1669927-1669948, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1197. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1690865-1690886, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1198. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1735877-1735898, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1199. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1755676-1755697, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1200. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1851600-1851621, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtgaccaatg	Protospacer
****************.**.**

1201. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908223-1908244, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1202. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908244-1908265, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaagcagtg	Protospacer
**************.* *****

1203. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908265-1908286, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaagcagtg	Protospacer
**************.* *****

1204. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1908300-1908321, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1205. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1916829-1916850, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1206. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1916864-1916885, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1207. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1958155-1958176, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1208. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 1958169-1958190, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1209. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2145741-2145762, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1210. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2145755-2145776, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1211. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150413-2150434, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1212. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2150420-2150441, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1213. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189735-2189756, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1214. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189770-2189791, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1215. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189777-2189798, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1216. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189791-2189812, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1217. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2189805-2189826, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1218. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2191969-2191990, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1219. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2191990-2192011, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1220. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192011-2192032, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1221. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192025-2192046, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1222. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192074-2192095, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1223. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192095-2192116, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1224. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192144-2192165, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1225. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192165-2192186, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1226. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192214-2192235, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1227. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2192221-2192242, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1228. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2248632-2248653, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaacagtgaccagtgaacagtg	Protospacer
** ************* *****

1229. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2248646-2248667, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaacagtgaccagtgaacagtg	Protospacer
** ************* *****

1230. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2248674-2248695, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaacagtg	Protospacer
**.************* *****

1231. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2248681-2248702, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1232. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2248688-2248709, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1233. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389719-2389740, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1234. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389761-2389782, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1235. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389775-2389796, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1236. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389782-2389803, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1237. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389789-2389810, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1238. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389796-2389817, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1239. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389803-2389824, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1240. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389810-2389831, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1241. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2389838-2389859, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1242. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425222-2425243, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1243. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425250-2425271, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1244. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425257-2425278, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1245. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425264-2425285, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1246. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425271-2425292, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1247. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425278-2425299, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1248. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425285-2425306, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1249. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425292-2425313, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1250. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425299-2425320, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1251. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2425313-2425334, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1252. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2431600-2431621, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1253. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2431607-2431628, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1254. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2431614-2431635, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1255. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2445843-2445864, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1256. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2483993-2484014, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1257. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2484000-2484021, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1258. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2581204-2581225, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1259. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2589328-2589349, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1260. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2729767-2729788, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1261. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757851-2757872, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaacagtgatcagtgatcagtg	Protospacer
** ******.************

1262. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757858-2757879, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1263. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2757914-2757935, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1264. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2786901-2786922, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1265. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2786950-2786971, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaaccagtg	Protospacer
**************.*.*****

1266. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2786985-2787006, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagtaaccagtg	Protospacer
**************.*.*****

1267. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787069-2787090, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1268. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787076-2787097, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1269. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787083-2787104, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1270. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2787090-2787111, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1271. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2791170-2791191, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1272. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799386-2799407, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1273. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2799414-2799435, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1274. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2813251-2813272, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1275. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859039-2859060, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1276. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859167-2859188, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1277. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859288-2859309, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1278. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859416-2859437, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1279. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859544-2859565, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1280. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859672-2859693, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1281. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2859801-2859822, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1282. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2860129-2860150, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1283. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2860457-2860478, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1284. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874893-2874914, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1285. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874900-2874921, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1286. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874928-2874949, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1287. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 2874956-2874977, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1288. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3009292-3009313, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcactgaccaatgatcagtg	Protospacer
***** ******.*********

1289. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3035084-3035105, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1290. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3115811-3115832, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1291. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3115825-3115846, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1292. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3164219-3164240, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1293. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3244801-3244822, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1294. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3325052-3325073, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtaaccagtgaccagtg	Protospacer
*******.********.*****

1295. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3333929-3333950, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1296. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3333936-3333957, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1297. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3334050-3334071, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1298. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3334057-3334078, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1299. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387878-3387899, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1300. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387885-3387906, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1301. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387899-3387920, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1302. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387913-3387934, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1303. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387948-3387969, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1304. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387955-3387976, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1305. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3387997-3388018, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1306. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3388039-3388060, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1307. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3388053-3388074, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1308. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3390844-3390865, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1309. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3390851-3390872, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1310. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3390879-3390900, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1311. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3400023-3400044, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1312. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3400030-3400051, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1313. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3428469-3428490, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccaatgaccagtgatcagtg	Protospacer
**.**.****************

1314. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3428476-3428497, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1315. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431637-3431658, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1316. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431651-3431672, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1317. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431658-3431679, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1318. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431665-3431686, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1319. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431728-3431749, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1320. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431742-3431763, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1321. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431777-3431798, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1322. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431791-3431812, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1323. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431819-3431840, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtaatcagtg	Protospacer
*********.****.*******

1324. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431840-3431861, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1325. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3431854-3431875, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1326. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3445714-3445735, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgatcactg	Protospacer
*********.********* **

1327. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3460872-3460893, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1328. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3561399-3561420, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagcgaccagtgatcagtg	Protospacer
**.***.***************

1329. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3573651-3573672, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1330. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3573679-3573700, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1331. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3577510-3577531, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1332. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3581345-3581366, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1333. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3581494-3581515, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1334. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3581515-3581536, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1335. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3581529-3581550, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1336. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3587337-3587358, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1337. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3590207-3590228, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1338. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3591712-3591733, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtggccagtgaccagtg	Protospacer
********.*******.*****

1339. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3634357-3634378, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccattgatcagtg	Protospacer
**.********* *********

1340. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3634371-3634392, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgaccagttaccagtg	Protospacer
************** *.*****

1341. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3685592-3685613, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1342. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3685711-3685732, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1343. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3698803-3698824, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtaatcagtg	Protospacer
**.***********.*******

1344. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3698817-3698838, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1345. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705667-3705688, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1346. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705695-3705716, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgaccagtgaccagtg	Protospacer
**.*************.*****

1347. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705723-3705744, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gaccagtgatcagtgatcagtg	Protospacer
**.******.************

1348. spacer 4.1|554213|22|NC_019780|CRISPRCasFinder matches to position: 3705730-3705751, mismatch: 2, identity: 0.909

gatcagtgaccagtgatcagtg	CRISPR spacer
gatcagtgatcagtgaccagtg	Protospacer
*********.******.*****

1349. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 127460-127480, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggctacgaaaccc	Protospacer
********* .**********

1350. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 137669-137689, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1351. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 137715-137735, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1352. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 144561-144581, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1353. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 144601-144621, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1354. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 165500-165520, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1355. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 237217-237237, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtcacgaaaccc	Protospacer
********* *.*********

1356. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 244153-244173, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtagagttcacgaaaccc	Protospacer
*****.*****.*********

1357. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 347592-347612, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1358. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 347648-347668, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1359. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 347703-347723, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1360. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 503311-503331, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1361. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 548031-548051, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1362. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 548146-548166, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1363. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 561274-561294, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagaatacgaaaccc	Protospacer
*********  **********

1364. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 746599-746619, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1365. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 746719-746739, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1366. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 922410-922430, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1367. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1062295-1062315, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgtagttcacgaaaccc	Protospacer
****** ****.*********

1368. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1063845-1063865, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1369. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1107414-1107434, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtaaagtttacgaaaccc	Protospacer
*****..**************

1370. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1107467-1107487, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtaaagtttacgaaaccc	Protospacer
*****..**************

1371. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1149305-1149325, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1372. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1149343-1149363, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1373. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1185813-1185833, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1374. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1185965-1185985, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1375. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1186110-1186130, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggagataacgaaaccc	Protospacer
********* * *********

1376. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1474503-1474523, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1377. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1520291-1520311, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1378. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1543363-1543383, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtcacgaaaccc	Protospacer
********* *.*********

1379. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1613077-1613097, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttgcgaaaccc	Protospacer
******.*****.********

1380. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1613121-1613141, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagtttgcgaaaccc	Protospacer
******.*****.********

1381. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1781669-1781689, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1382. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1791487-1791507, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagttcacgaaaccc	Protospacer
******.****.*********

1383. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1827642-1827662, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1384. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 1898255-1898275, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1385. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2169143-2169163, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1386. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2359402-2359422, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1387. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2359463-2359483, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1388. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2359524-2359544, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1389. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2359585-2359605, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1390. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2406340-2406360, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtcacgaaaccc	Protospacer
********* *.*********

1391. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2406476-2406496, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtcacgaaaccc	Protospacer
********* *.*********

1392. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2445963-2445983, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1393. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2653014-2653034, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1394. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2653160-2653180, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1395. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2861595-2861615, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagttgacgaaaccc	Protospacer
******.**** *********

1396. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2861679-2861699, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagttgacgaaaccc	Protospacer
******.**** *********

1397. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2871891-2871911, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1398. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 2872096-2872116, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1399. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3027186-3027206, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1400. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3168215-3168235, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1401. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3193384-3193404, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1402. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3193437-3193457, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1403. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3268134-3268154, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtgacgaaaccc	Protospacer
********* * *********

1404. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3536344-3536364, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1405. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3589992-3590012, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtgaagttgacgaaaccc	Protospacer
******.**** *********

1406. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3626567-3626587, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1407. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3628872-3628892, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1408. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3751919-3751939, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggtaacgaaaccc	Protospacer
********* * *********

1409. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3779769-3779789, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggctacgaaaccc	Protospacer
********* .**********

1410. spacer 4.2|554262|21|NC_019780|CRISPRCasFinder matches to position: 3779898-3779918, mismatch: 2, identity: 0.905

tgggtggagtttacgaaaccc	CRISPR spacer
tgggtggaggctacgaaaccc	Protospacer
********* .**********

1411. spacer 7.1|883101|26|NC_019780|CRISPRCasFinder matches to position: 3409383-3409408, mismatch: 2, identity: 0.923

ataatttggtgttgggtttcgctact	CRISPR spacer
ataatttgatgttgggtttcgcttct	Protospacer
********.************** **

1412. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 63174-63201, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttacctcttgccttttgcct	Protospacer
***.******.*****************

1413. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 82898-82925, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1414. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 139874-139901, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1415. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 464084-464111, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1416. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 626910-626937, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1417. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 666108-666135, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1418. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822390-822417, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1419. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822397-822424, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1420. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822411-822438, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1421. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822418-822445, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1422. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 822439-822466, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1423. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979464-979491, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1424. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979471-979498, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1425. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 979583-979610, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1426. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009726-1009753, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1427. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009803-1009830, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1428. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1009810-1009837, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1429. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1255361-1255388, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttgcctcttgcct	Protospacer
***.*****************.******

1430. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1517956-1517983, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttacctcttgcctcttgcct	Protospacer
**********.**********.******

1431. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1517970-1517997, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1432. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674784-1674811, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1433. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1674791-1674818, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1434. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1721971-1721998, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1435. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1884400-1884427, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1436. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1884484-1884511, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1437. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2005207-2005234, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1438. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2032963-2032990, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1439. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2033005-2033032, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1440. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2033040-2033067, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1441. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2380784-2380811, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1442. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2380826-2380853, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1443. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2807129-2807156, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1444. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2887177-2887204, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttacctcttgcctcttgcct	Protospacer
**********.**********.******

1445. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2887198-2887225, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1446. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109712-3109739, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1447. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109831-3109858, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1448. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109845-3109872, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1449. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109866-3109893, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1450. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109915-3109942, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1451. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109922-3109949, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1452. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109936-3109963, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1453. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3109943-3109970, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1454. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3336886-3336913, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1455. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3336907-3336934, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1456. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456851-3456878, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1457. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456865-3456892, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1458. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456872-3456899, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1459. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456900-3456927, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1460. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3456907-3456934, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1461. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567805-3567832, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1462. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567812-3567839, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1463. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567833-3567860, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1464. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567840-3567867, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1465. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567868-3567895, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1466. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567875-3567902, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1467. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567889-3567916, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1468. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567896-3567923, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1469. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567931-3567958, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1470. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3567966-3567993, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1471. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664437-3664464, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1472. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664577-3664604, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1473. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664661-3664688, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1474. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664668-3664695, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgccttttacct	Protospacer
*******.****************.***

1475. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3664738-3664765, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1476. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3693322-3693349, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1477. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 75446-75473, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1478. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203585-203612, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1479. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203592-203619, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1480. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203613-203640, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1481. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203620-203647, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1482. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 203634-203661, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1483. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 305026-305053, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1484. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 305069-305096, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgctttttgcct	Protospacer
**************.****.********

1485. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 527426-527453, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1486. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 594377-594404, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttgcctcttgcct	Protospacer
***.*****************.******

1487. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 685533-685560, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1488. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 843201-843228, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1489. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1042763-1042790, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1490. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1288535-1288562, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1491. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1288542-1288569, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1492. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1288556-1288583, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1493. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1288577-1288604, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1494. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1309294-1309321, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1495. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856103-1856130, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1496. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856124-1856151, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1497. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856145-1856172, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1498. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1856152-1856179, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1499. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1934125-1934152, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1500. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 1996266-1996293, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1501. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2016872-2016899, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1502. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2045030-2045057, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1503. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2045037-2045064, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1504. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2045072-2045099, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1505. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2252783-2252810, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1506. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2252790-2252817, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1507. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2252832-2252859, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgcctcttaccttttgcct	Protospacer
***.*************.**********

1508. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2410379-2410406, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1509. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2410386-2410413, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1510. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2443345-2443372, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1511. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2567996-2568023, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1512. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2568086-2568113, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttggct	Protospacer
*********************.*** **

1513. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2597488-2597515, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1514. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797965-2797992, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1515. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2797972-2797999, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1516. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798028-2798055, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1517. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798035-2798062, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1518. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2798105-2798132, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1519. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2858673-2858700, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1520. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2858708-2858735, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1521. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2925638-2925665, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1522. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2948384-2948411, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1523. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2948391-2948418, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttgccttttgccttttgcct	Protospacer
***.**********.*************

1524. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 2948398-2948425, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttacctcttgccttttgcct	Protospacer
***.******.*****************

1525. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3026926-3026953, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1526. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3026933-3026960, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1527. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066635-3066662, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttacctcttgccttttgcct	Protospacer
*******.**.*****************

1528. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066684-3066711, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctttcgcctcttgccttttgcct	Protospacer
*******.*.******************

1529. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066831-3066858, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1530. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066845-3066872, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1531. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3066852-3066879, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1532. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3100321-3100348, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttacctcttacctcttgccttttgcct	Protospacer
***.******.*****************

1533. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3509449-3509476, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgcctcttgcctcttgcct	Protospacer
*******.*************.******

1534. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3509484-3509511, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgccttttgcctcttgcct	Protospacer
**************.******.******

1535. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to position: 3715262-3715289, mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgccttttgccttttgccttttgcct	Protospacer
*******.******.*************

1536. spacer 12.1|1310155|33|NC_019780|CRISPRCasFinder matches to position: 1613162-1613194, mismatch: 2, identity: 0.939

atgttgggtttcacttcgtttcacgcaacctac	CRISPR spacer
atgttgggttacacttcgtttcacccaacctac	Protospacer
********** ************* ********

1537. spacer 19.1|1527621|55|NC_019780|CRISPRCasFinder matches to position: 3183176-3183230, mismatch: 2, identity: 0.964

acattttatcttttccccccaatcatcggggggttaggggggattattccttgat	CRISPR spacer
actttttatcttttccccccaatcatcggggggttaggggggatgattccttgat	Protospacer
** ***************************************** **********

1538. spacer 36.1|2831965|45|NC_019780|CRISPRCasFinder matches to position: 2078835-2078879, mismatch: 2, identity: 0.956

aataccaatttagaaagtagatgttacatcttgtagggtgggcaa	CRISPR spacer
aataccaatttaaaaagtagatattacatcttgtagggtgggcaa	Protospacer
************.*********.**********************

1539. spacer 36.1|2831965|45|NC_019780|CRISPRCasFinder matches to position: 2503054-2503098, mismatch: 2, identity: 0.956

aataccaatttagaaagtagatgttacatcttgtagggtgggcaa	CRISPR spacer
aataccaatttaaaaagtaaatgttacatcttgtagggtgggcaa	Protospacer
************.******.*************************

1540. spacer 27.1|2010607|63|NC_019780|CRISPRCasFinder matches to position: 2010482-2010544, mismatch: 4, identity: 0.937

ccacccattgcagtgaccaatgtagagacgttccatggaacgtctcccagtaatcagtga	CRISPR spacer
ccacccattgcagtgaccaatgtagagacgttccatggaacgtctcccagtaatcagtaa	Protospacer
**********************************************************.*

1541. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 652283-652303, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1542. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 722062-722082, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1543. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 827439-827459, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1544. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 948315-948335, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1545. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 967085-967105, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1546. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 988330-988350, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1547. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1187323-1187343, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1548. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1309314-1309334, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1549. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1577576-1577596, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1550. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1843331-1843351, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1551. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 1845762-1845782, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1552. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2013866-2013886, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1553. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2016913-2016933, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1554. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2067273-2067293, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1555. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2380862-2380882, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1556. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2380883-2380903, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1557. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2565546-2565566, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1558. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 2948355-2948375, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1559. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3018382-3018402, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1560. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3023089-3023109, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1561. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3288787-3288807, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1562. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3333820-3333840, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1563. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3664725-3664745, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

1564. spacer 10.2|948265|21|NC_019780|CRISPRCasFinder matches to position: 3715247-3715267, mismatch: 7, identity: 0.667

------aaggcaacttgcctaaggcaa	CRISPR spacer
ttgcctaaggcaacttgcctt------	Protospacer
      **************       

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21866-21893	2	0.929
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21866-21899	4	0.882
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21873-21900	4	0.857
NC_019780_49	49.1|3607460|28|NC_019780|CRISPRCasFinder	3607460-3607487	28	NZ_CP025929	Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence	60771-60798	4	0.857
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21859-21886	6	0.786
NC_019780_10	10.1|948202|28|NC_019780|CRISPRCasFinder	948202-948229	28	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	406345-406372	6	0.786
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	184427-184467	6	0.854
NC_019780_43	43.1|3126784|28|NC_019780|CRISPRCasFinder	3126784-3126811	28	AC171169	Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE	99983-100010	6	0.786
NC_019780_43	43.1|3126784|28|NC_019780|CRISPRCasFinder	3126784-3126811	28	NC_042307	Escherichia virus H8, complete genome, *** SEQUENCING IN PROGRESS ***	99983-100010	6	0.786
NC_019780_47	47.1|3373696|30|NC_019780|CRISPRCasFinder	3373696-3373725	30	MK867354	Synechococcus phage S-SCSM1, complete genome	38342-38371	6	0.8
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	185006-185046	8	0.805
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NC_020287	Synechocystis sp. PCC 6803 plasmid pSYSA_M, complete sequence	72518-72558	8	0.805
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_CP028097	Synechocystis sp. IPPAS B-1465 plasmid pSYSA, complete sequence	74999-75039	8	0.805
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NC_005230	Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequence	75076-75116	8	0.805
NC_019780_47	47.1|3373696|30|NC_019780|CRISPRCasFinder	3373696-3373725	30	NZ_CP023307	Lactobacillus plantarum strain LLY-606 plasmid p.LLY60601, complete sequence	26495-26524	8	0.733
NC_019780_47	47.1|3373696|30|NC_019780|CRISPRCasFinder	3373696-3373725	30	MN693218	Marine virus AFVG_25M185, complete genome	7623-7652	8	0.733
NC_019780_47	47.1|3373696|30|NC_019780|CRISPRCasFinder	3373696-3373725	30	MN693518	Marine virus AFVG_25M99, complete genome	6208-6237	8	0.733
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NZ_CP031094	Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence	21859-21892	9	0.735
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	181922-181962	9	0.78
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_CP028099	Synechocystis sp. IPPAS B-1465 plasmid pSYSM, complete sequence	43206-43246	9	0.78
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NC_005229	Synechocystis sp. PCC 6803 plasmid pSYSM, complete sequence	43206-43246	9	0.78
NC_019780_25	25.1|1849204|30|NC_019780|CRISPRCasFinder	1849204-1849233	30	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	161081-161110	10	0.667
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	188104-188144	10	0.756
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	185116-185156	10	0.756
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NC_019761	Microcoleus sp. PCC 7113 plasmid pMIC7113.04, complete sequence	31119-31159	10	0.756
NC_019780_47	47.1|3373696|30|NC_019780|CRISPRCasFinder	3373696-3373725	30	MW147367	Synechococcus phage S-H9-2, complete genome	175019-175048	10	0.667
NC_019780_3	3.1|363881|34|NC_019780|CRISPRCasFinder	363881-363914	34	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	406339-406372	11	0.676
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_AP017561	Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence	189620-189660	11	0.732
NC_019780_29	29.1|2410486|41|NC_019780|CRISPRCasFinder	2410486-2410526	41	NZ_CP017600	Moorea producens PAL-8-15-08-1 plasmid unnamed, complete sequence	12692-12732	11	0.732

1. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 2, identity: 0.929

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttgcctcttggct	Protospacer
*********************.*** **

2. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 4, identity: 0.882

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
agccaagaggcaagaggcaagaggcaagagtcta	Protospacer
** *****************.********* * *

3. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 4, identity: 0.857

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
ttagactcttgcctcttgcctcttgcct	Protospacer
.* * ****************.******

4. spacer 49.1|3607460|28|NC_019780|CRISPRCasFinder matches to NZ_CP025929 (Microcystis aeruginosa NIES-2481 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.857

aatccccccttcataagggggggaaaac	CRISPR spacer
aatccccccttgataaggggggtaagag	Protospacer
*********** ********** **.* 

5. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 6, identity: 0.786

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
cttgcctcttgcctcttggctactggga	Protospacer
****************** ** .**   

6. spacer 10.1|948202|28|NC_019780|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 6, identity: 0.786

cttgcctcttgcctcttgccttttgcct	CRISPR spacer
tttgtcttttgcctcttgccttttgata	Protospacer
.***.**.***************** . 

7. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 6, identity: 0.854

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
cttcaagtcccccagaattgggggatttagggggcagatcc	Protospacer
  *******************.**************. *.*

8. spacer 43.1|3126784|28|NC_019780|CRISPRCasFinder matches to AC171169 (Escherichia virus H8 clone h8_phage, WORKING DRAFT SEQUENCE) position: , mismatch: 6, identity: 0.786

aaaagtcgatcaaagtaggttgggtgta	CRISPR spacer
taaagtcgatcaaagtacgttgcccgtt	Protospacer
 **************** ****  .** 

9. spacer 43.1|3126784|28|NC_019780|CRISPRCasFinder matches to NC_042307 (Escherichia virus H8, complete genome, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.786

aaaagtcgatcaaagtaggttgggtgta	CRISPR spacer
taaagtcgatcaaagtacgttgcccgtt	Protospacer
 **************** ****  .** 

10. spacer 47.1|3373696|30|NC_019780|CRISPRCasFinder matches to MK867354 (Synechococcus phage S-SCSM1, complete genome) position: , mismatch: 6, identity: 0.8

acactcaacttacaattaatgttgggtttc	CRISPR spacer
acactcaagttaaaattaatgttggtatat	Protospacer
******** *** ************  * .

11. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 8, identity: 0.805

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
ttcaaagtcccccagaattgggggatttagggggcagatcc	Protospacer
  . *****************.**************. *.*

12. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NC_020287 (Synechocystis sp. PCC 6803 plasmid pSYSA_M, complete sequence) position: , mismatch: 8, identity: 0.805

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
gtcaaagtcccccagtattgggggatttagggggcagaatc	Protospacer
* . *********** *****.**************.  **

13. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_CP028097 (Synechocystis sp. IPPAS B-1465 plasmid pSYSA, complete sequence) position: , mismatch: 8, identity: 0.805

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
gtcaaagtcccccagtattgggggatttagggggcagaatc	Protospacer
* . *********** *****.**************.  **

14. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NC_005230 (Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequence) position: , mismatch: 8, identity: 0.805

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
gtcaaagtcccccagtattgggggatttagggggcagaatc	Protospacer
* . *********** *****.**************.  **

15. spacer 47.1|3373696|30|NC_019780|CRISPRCasFinder matches to NZ_CP023307 (Lactobacillus plantarum strain LLY-606 plasmid p.LLY60601, complete sequence) position: , mismatch: 8, identity: 0.733

acactcaacttacaattaatgttgggtttc	CRISPR spacer
tcggacgctttacaattaatgttggctttc	Protospacer
 *.  *. .**************** ****

16. spacer 47.1|3373696|30|NC_019780|CRISPRCasFinder matches to MN693218 (Marine virus AFVG_25M185, complete genome) position: , mismatch: 8, identity: 0.733

acactcaacttacaattaatgttgggtttc	CRISPR spacer
agcaacaacttacaactaatgttggtttaa	Protospacer
*    **********.********* **  

17. spacer 47.1|3373696|30|NC_019780|CRISPRCasFinder matches to MN693518 (Marine virus AFVG_25M99, complete genome) position: , mismatch: 8, identity: 0.733

acactcaacttacaattaatgttgggtttc	CRISPR spacer
agcaacaacttacaactaatgttggtttaa	Protospacer
*    **********.********* **  

18. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to NZ_CP031094 (Hydrocarboniclastica marina strain soil36-7 plasmid psoil36-7, complete sequence) position: , mismatch: 9, identity: 0.735

-------aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
tcccagtagccaagaggcaagaggcaagaggcaa-------	Protospacer
       ** *****************.******       

19. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 9, identity: 0.78

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
ctcaaagtcccccagaattgggggatttagggggcaaagct	Protospacer
  . *****************.***************  ..

20. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_CP028099 (Synechocystis sp. IPPAS B-1465 plasmid pSYSM, complete sequence) position: , mismatch: 9, identity: 0.78

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
atcaaagtcccccagtattgggggatttagggggcagaatc	Protospacer
. . *********** *****.**************.  **

21. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NC_005229 (Synechocystis sp. PCC 6803 plasmid pSYSM, complete sequence) position: , mismatch: 9, identity: 0.78

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
atcaaagtcccccagtattgggggatttagggggcagaatc	Protospacer
. . *********** *****.**************.  **

22. spacer 25.1|1849204|30|NC_019780|CRISPRCasFinder matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 10, identity: 0.667

gaagcgtaacccaacaccaatcacgaaagc	CRISPR spacer
acttcgaaacccaacaccaatcacgcgtta	Protospacer
.   ** ****************** .   

23. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 10, identity: 0.756

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
tggaaagtcccccagaattgggggatttagggggcgatgaa	Protospacer
 .  *****************.*************.*.   

24. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 10, identity: 0.756

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
ttcaaagtcccccagaattgggggatttagggggctaggct	Protospacer
  . *****************.************* *  ..

25. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NC_019761 (Microcoleus sp. PCC 7113 plasmid pMIC7113.04, complete sequence) position: , mismatch: 10, identity: 0.756

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
tctcgcgtcccccagaattggggaatttagggggcattgtt	Protospacer
  **. ***************.*.************ . *.

26. spacer 47.1|3373696|30|NC_019780|CRISPRCasFinder matches to MW147367 (Synechococcus phage S-H9-2, complete genome) position: , mismatch: 10, identity: 0.667

acactcaacttacaattaatgttgggtttc	CRISPR spacer
gtgttcaacttgcaattaatgttggagaca	Protospacer
....*******.*************.  . 

27. spacer 3.1|363881|34|NC_019780|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 11, identity: 0.676

aggcaagaggcaagaggcaaaaggcaagaggcaa	CRISPR spacer
tatcaaaaggcaagaggcaaaagacaaaatcttg	Protospacer
 . ***.****************.***.*  . .

28. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_AP017561 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53a, complete sequence) position: , mismatch: 11, identity: 0.732

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
tccaaagtcccccagaattgggggatttagggggcttagat	Protospacer
  . *****************.*************     .

29. spacer 29.1|2410486|41|NC_019780|CRISPRCasFinder matches to NZ_CP017600 (Moorea producens PAL-8-15-08-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.732

gatcaagtcccccagaattggaggatttagggggcaacttc	CRISPR spacer
gtaaaagtcccccagaattgggagatttagggggcttggat	Protospacer
*   *****************..************     .