CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006690	Lactobacillus casei 12A chromosome, complete genome	3 crisprs	DinG,WYL,DEDDh,csa3,cas3,RT	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006690_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006690_1

267086-267230

Orphan

Consensus_repeat	Method
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006690_1

>merge|NZ_CP006690|1|267086-267230|CRISPRCasFinder
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAAGTAGAGCATAAGCGGCCCCAAGCCTAAATGGCCGGGCTTTGGCATTTAGGCTTGGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA

>NZ_CP006690|1|1|267086-267230|CRISPRCasFinder
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA	GTAGAGCATAAGCGGCCCCAAGCCTAAATGGCCGGGCTTTGGCATTTAGGCTT
GGGGTCCTTATGAGCAGGTTTCTGCGCCTGTTTGCGCGTTTCGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006690.1\|WP_003563013.1\|260310_261162_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|223695
NZ_CP006690.1\|WP_003563030.1\|270105_270849_+\|DUF975-family-protein	unknown	unknown	gnl\|CDD\|227810
NZ_CP006690.1\|WP_003563032.1\|270957_271290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563036.1\|271580_272180_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP006690.1\|WP_003563007.1\|258311_258656_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563011.1\|259445_260243_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP006690.1\|WP_003563026.1\|268461_269220_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP006690.1\|WP_003563028.1\|269304_270087_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP006690.1\|WP_003563040.1\|273575_275123_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP006690.1\|WP_003563019.1\|263964_265059_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|181811
NZ_CP006690.1\|WP_003568841.1\|281597_281912_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP006690.1\|WP_003563004.1\|256712_258065_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NZ_CP006690.1\|WP_003563042.1\|275282_276023_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006690.1\|WP_003563002.1\|254959_256528_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP006690.1\|WP_003563038.1\|272257_273196_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP006690.1\|WP_003563017.1\|262036_263836_-\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NZ_CP006690.1\|WP_003563009.1\|258729_259449_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213202
NZ_CP006690.1\|WP_004562160.1\|261158_262040_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP006690.1\|WP_003563021.1\|265209_266589_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
NZ_CP006690.1\|WP_003563024.1\|267330_268017_-\|hydrolase	unknown	unknown	gnl\|CDD\|270620

Protein	Function_ID	Function_description	E-value
NZ_CP006690.1\|WP_003563013.1\|260310_261162_-\|metallophosphoesterase-family-protein	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	2.75673e-13
NZ_CP006690.1\|WP_003563030.1\|270105_270849_+\|DUF975-family-protein	gnl\|CDD\|227810	COG5523, COG5523, Predicted integral membrane protein [Function unknown].	5.48812e-07
NZ_CP006690.1\|WP_003563036.1\|271580_272180_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	6.78672e-47
NZ_CP006690.1\|WP_003563011.1\|259445_260243_+\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	1.10945e-41
NZ_CP006690.1\|WP_003563026.1\|268461_269220_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	4.33431e-57
NZ_CP006690.1\|WP_003563028.1\|269304_270087_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	5.11135e-36
NZ_CP006690.1\|WP_003563040.1\|273575_275123_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.45525e-169
NZ_CP006690.1\|WP_003563019.1\|263964_265059_+\|LCP-family-protein	gnl\|CDD\|181811	PRK09379, PRK09379, LytR family transcriptional regulator.	1.41929e-91
NZ_CP006690.1\|WP_003568841.1\|281597_281912_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.32335e-29
NZ_CP006690.1\|WP_003563004.1\|256712_258065_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	3.05864e-167
NZ_CP006690.1\|WP_003563042.1\|275282_276023_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.73561e-07
NZ_CP006690.1\|WP_003563002.1\|254959_256528_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP006690.1\|WP_003563038.1\|272257_273196_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	7.47758e-32
NZ_CP006690.1\|WP_003563017.1\|262036_263836_-\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NZ_CP006690.1\|WP_003563009.1\|258729_259449_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213202	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.	5.1545e-66
NZ_CP006690.1\|WP_004562160.1\|261158_262040_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	5.68511e-110
NZ_CP006690.1\|WP_003563021.1\|265209_266589_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	7.36575e-108
NZ_CP006690.1\|WP_003563024.1\|267330_268017_-\|hydrolase	gnl\|CDD\|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	2.76198e-08

>NZ_CP006690.1|WP_003563021.1|265209_266589_-|branched-chain-amino-acid-transport-system-II-carrier-protein
MSPQPTLTKRQYLTLGSLLFGMFFGAGNLIFPIHMGQLAGSAWLPAAIGFLLSAVLLPLLSIMAISLTRASSMYDLARPAGHSFALFFLLATHASLGLLIASPRTATVTYSIGIAPFLGKDQQQIGLLIFSFIFFLTTFLLARNESKITTYIGKLLNPLLLILLAVIFFWALVIKGDIRAISFTSSPKLMSSNLINGFLQGYNTMDALAGLGFGVTIITALKLMGLHQASTRAKAVAKVGSLAMGLEALIYMLLILLGAISLGFSKLTANGGTAFNQIMTHYTGLIGTALLGAMTLLACLTTAIGLVTSFSQDLGHRFPKLGYHFFLPMTTIGAFLIANFGLDQIIAYSTPILMLLYPLAIALIMLGLMHPWIGKNTRIYKTTVAFTMIPALLDAIHALPAGLAQLPIFSSIQQFATTYIPWFGIGMDFVPFLLIGFLTGFIAAKLSGHKLAPDLPDPD
>NZ_CP006690.1|WP_003563019.1|263964_265059_+|LCP-family-protein
MDKQPDSDQQTLKRKPKRRHPILRALAIIALVALFLAGGYAARFYSQAKKAVAKTYDPVSTKAVSSDLDGKKPISILLLGTDTGAFGRKDTGRSDTMMLVTINPKEKKTTMTSIPRDTLAEMVGTGSDSPTYEKINAAYAYGQSDAAIKTVEKLLDVPINYYVTVNMAGLSKIVDAVGGVDVNVPFSWTDWNTGGQTFKKGKAHLDGGMALAYARMRDEDPEGDYGRQKRQQEVINQIVKHLLSVKSLTNYQKVMDSLSSSMRTNLTFDDMMAIAQNYRASATTIDRQQLKGIGVYIDEAAYQVMTTETLQKMSNELRGQLGLESKTLSNFNTQQNEINNANGFDWTANNPVYTVSLDGATTGP
>NZ_CP006690.1|WP_003563017.1|262036_263836_-|oligoendopeptidase-F
MQHLPARAEVPTELTWDLTTIYPDDKAWQVDFEAVRQQAKEAAALKGTLGKSPEALVAGIKAVLAVFRRFEKVYVYSSLKSDQDTGNAAYQAMNAKAESLAADLASQLAFMDPEILAIPADQLTAWRDTESLKPYGHFIDAITVNRQHVLTTAAESLIASAGDALNASHATFNVLNNSDLQFGFVENEDGETVQLSNGLYGQLIRSTNRKLRKDAFEALLRAYESLKNTFAQTLSGQIKAHNFNALAHHYPDARAAAMASNHIPESVYTTLLDQVNAHLPLLHRYIALRKKILNVDQLHMYDIYTPLTGRPPLSFTLDQAKDEALKALAPLGNDYLDHMREIFNNRYIDVVENKGKRSGAYSGGAYDTNPFILLNWHDAVDELYTLVHETGHSVHSWYTRHHQPYVYGDYPIFVAEIASTTNENLLTDYFLKNTNDPKVRAYILNYYLDGFKGTVFRQAQFADFEHWIHQQDQHGEPLTATSMSSYYADLNARYYGPDVARDPEIAFEWARIPHFYYNYYVYQYATGFAAASTLAAGISGGEPEAVSRYIGYLKSGSSKYAIDTMKAAGVDMTKPDYLEAAFSLFEQRLAELEKILQKG
>NZ_CP006690.1|WP_004562160.1|261158_262040_-|NAD(P)-dependent-oxidoreductase
MSSVKLGFIGTGVMGTGIIKNFLKNGQEVVVFNRTQAHAQPVIEAGATWAESPHAVAAQCDIVLSMVGFPQDVETIYFGSDGILAGARKGALLIDMTTSTPTLAKKIAAKAAEKGLQAVDAPVSGGDIGAKNGTLTIMVGGDKTLLSRLQQLFAPIAASVNYFGPAGSGQHAKMANQIMIAGTMTGLTEMLVYAKAAGLDLDETLKVVGGGAGANWSLSNYGPRILQGDYTPGFFAKHFLKDLRIALDEADNMHLQLPATQLAKQLYEQMVNTGKGNLGTQGLITMNDRWDQA
>NZ_CP006690.1|WP_003563013.1|260310_261162_-|metallophosphoesterase-family-protein
MTTIAILSDIHGNMTAFSAVIQDAKAHQADEYWFLGDLFLPGPGSDKLWATLHGLKPTHIVKGNWDDDLFWVLDGPVDLSQPTDVYFSRLVAYLWPHLTAENLATIRNWPLHEVFEQDGLIVSLAHNLPDKNQGHALYPDQPQLNFDQIAPDSQIDLAVYGHTHQQLLRYTSNGQVILNPGSIGQAYSPRPHLQTTTYADYALLQLNDGAITDLDLRQVPYDVSAELSLAKQQQLPYPEVYTKLRHTGATSTHNAAYLKQFEQRHDYQQEVAEFLHKYRHQHY
>NZ_CP006690.1|WP_003563011.1|259445_260243_+|metal-ABC-transporter-permease
MNLFAYAFMQNAFMASTFIAITTGIVGVFVVARNMSFLAHTLSEVGFAGAAFAVFAGIRPLDGMLLFTAISSISVGRMSVQASRREASISAVSSLFIGLGILFLSLSSANASYATTILFGSIIGISRADVWQLVALAAGVLVTLYFGYRRLAFDSFDPVGSAAQGLKSKYISIYFLLILAVSVSIGAQIVGSLLVFILLTLPPNVAKYLGRTLPQMIVISVITALIGVWSGLYLGFLTNWPVTFFIAAIEFLFYFLALWYHHRTN
>NZ_CP006690.1|WP_003563009.1|258729_259449_+|ATP-binding-cassette-domain-containing-protein
MSEPILTVNHLSFGFRDQQLYQDLSFQLNVGSMTSLVGPNGVGKTTLIRLLMAQLKPQAGTIRFRQQPPVRLGYVPQFRNVDTEFPLSIRSFIQLRQLDHLFFWHTGKEKAALDAVIKATHLGKIADTRLGMASGGEKQKAYLAQALLDDPNFLILDESTASLDVNTKQELMDLVQELNQTRQLTVLFVTHDLSLAKKYTQQYLLLTGSSYEMKPTAQMDLKAMPEELRNDAENRGVIA
>NZ_CP006690.1|WP_003563007.1|258311_258656_+|hypothetical-protein
MYEPTKKRRVAEDVAKVFPKEVTNQIFDVIAVMNKAKQIVTAPVAIAFSDDYTDDEMYAMIIQGNLAPAQEFPLTYAGEKPFLGHGYILVVKDKPKTIRLDFSTANPFKAEESK
>NZ_CP006690.1|WP_003563004.1|256712_258065_+|gluconate-permease
MDILVLVLGILLLLVLIIKFKFNTYVSLIITAVVVALGLGMAPAKIATSIQNGIGAQLGELALVFGFGAMLGRLVADAGGAYRIAHTLINAFGRRGLQLAVVLASFIIGIALFFEVGIVLLVPIVFAIAAEAGVPILTLGIPMAAALSVTHGFLPPHPAPTAISTALGASAGLVLAYGVIIAIPTVYIAGPLFSKLAHRFVPDAFERRSNLKALGPQKTFKLEETPSFGISVLTSLFPVILMAIATVYELVFHGGKLPKTPNGLDNVIAFIGSPSIAMLISLLFAMWAMGYARKLPAKAIMTTLEDAVKSIAMLLLVIGGGGAFKQVLIDGGVGDSVKNLFVGSGISPLILGWLIAVVLRIALGSATVAAMTASGLVLPLMQSAGIQPALMVLAIGAGSLAASHVNDAGFWMFREYFDLTIKQTLLTWTLLETIISVVGLGGVLLLSLVV
>NZ_CP006690.1|WP_003563002.1|254959_256528_+|gluconokinase
MAIKYMIGVDLGTTSTKVVLFDLKGHAIATANNPYPLYQDTPDMAEEDPEEIFAATVGGLTEVMHRGNVQPDELGGVSFSAAMHSLILMDENDKPLTRVITWADNRAAAYATKLKQSDLGMTLFKNTGVPTHPMSPLVKLLWLSAEHPELVAQTSHFIGIKDFILFRFFGRYVQDYSLANATGLFNIHTMDWDDRALDVANVRRDQLPELVDTSYQLTGLNANYAAVTGIDAKTPFILGASDGTLSNLGVGAIDPGVLAVTIGTSGAVRVVTDKPVVDPQGRLFTYYLSPNHWVVGGPVNNGGIVFRWVRDQLFAPEKLTAEQLQVDSYEILTEIASKIPAGADGLLFHPYLGGERAPIWDANARGSFFGLTRQHTRAHMVRAALEGIVYNLYMVMLMIEGITGKPKAIQATGGFARSALWRQMLADVFEQEVNIPESFESSALGAVVLGMKSLGLIDDLNVVKDMIGVTNTHEPNADNFQAYRELLPIWIRLTRKLGSEYQAIADYQRAHPDPNAHIAAED
>NZ_CP006690.1|WP_003563024.1|267330_268017_-|hydrolase
MASNHSQKVEAIADHADADNDSSHVNAKSIVLSNEAKVEQANAHSLINPKKEITFTVGTNDIAEAAHQIADQKAAAAKAAEEQAAAEQAAAEQAAAEQAAAEKAQQEAQQAAQNAAAASAASAASASSSAATTASTETTTNKGTFKLSFYDPSVLGSGLGYGGVAANLSVFPKGTRLKITLSDGTVWYRTVNDTGSFAAGNPNQLDVAMPNSQIPSAGVLTATVEVVG
>NZ_CP006690.1|WP_003563026.1|268461_269220_+|DeoR/GlpR-transcriptional-regulator
MAMYREKRFEEIKKLLAARSELSIEDIMKAVGVSRDTARRDIVALDAQGVARRTRGGLVSLSFGHTIPSYSARLKRFSTQKTKMAKSALTLIKPGGVYFIDDSTTLLKLSQSIRQPVTVYTHSLDNAIALSVEERVNLHLFGGKLDHHARFFFEPTMLETLRRIAFDAAFIGATAIAEDGVYFSYMEDAQVKQAAALSARRVVVVSETEKFQIEAPYRGLELGQITTLITDKKLSQTHKQWFAPQTQFLLGD
>NZ_CP006690.1|WP_003563028.1|269304_270087_+|glycosyltransferase-family-2-protein
MVKPLVTIIVPVYNLEAYVAHGLKSLIEQTYSHLQIIVIDDASKDHSPQIIAHFAELDSRIQPILKQVNHGVSAARNSGLALAKGDLVAFMDGDDWYEPDFIAHAVDMMARGWDLIAMPFYRDDPDPRPVHEALRKPKQLTREGLIRQMLHPIGYIRGYLWNKVFRRDVIEQVRLRFDESMTIMEDELFTATYVMATHRFLYTGHPAYHHVVRRDSATQSLGIIGAVPQQLYALWRIHQVLRVARRTEKVTKKEAIKIEH
>NZ_CP006690.1|WP_003563030.1|270105_270849_+|DUF975-family-protein
MTEHLMTYRQLKQKAKGQLKEGTNRRDLMLAYLLPSLIQAAVAIITYLMVFALIQKFGIDKALTDPDGFQNYLQSGNRTGSMNTIQSLVNTMLIQGVNFGVLDLVRRKERVQPLHALLGLFNGQWFWGAISLWIFMYFLTLMGLSFFLIPGILLALGWRQAFWVFKDGHETNQRFSSISALIGSWRLMRGFKGDLLGLYVSMIGWYLLENITFHLFDWVINPYLQLVHANYYENRRAYKIAAQAAQS
>NZ_CP006690.1|WP_003563032.1|270957_271290_+|hypothetical-protein
METEAYMTLAEVKARQAALKDKVPLDQAIAENIQNWAQWLLDEGFEDSYFTAKIDGDTINITDLDGHPAASISTDAPSYVEAFKDSDRMTMMAIQTKLRRLIDRQVLKSQ
>NZ_CP006690.1|WP_003563036.1|271580_272180_-|signal-peptidase-I
MKNNSHSTLKTVLEFLVLFAVIFFASQLLMRYVLSKDVVQGTSMQPTLENGDRLYSIRVKKPKRNDIVVINAPDRPGSLYIKRVIGMPGDTVSSKDNQLSVNGKKIAEPYLNKKFATDEINKWASQQGLDASTIKFTNDFNIKTLSSTKSAKVPAGKYFVMGDNRLVSHDSRDFGFVDKSKIQSVVVWRYWPLNQMKLY
>NZ_CP006690.1|WP_003563038.1|272257_273196_-|ADP-ribosylglycohydrolase-family-protein
MGIMESRLIHGTVGFAIGDALGLPVKGQNAAELTAAPVTTMKGYGTFNQPAGTYSDETGLALAGLDALQHGFDEQALIKAYQAWFTAGKYAPYGKRSPDIWPSIETALKTGQSVASPKEPGALIRILPFAFFAYQTFDTSLFQKAEGVKVLETFVHITNQDAENLVAAGIYMQIAVELLGATPDLPSAIATGTDKAGSYFGTTQPYQPIFEAFQAALADDKWPDESATDPISLLARTLKALQSKPDYHDAVLQTVNQGGATDTTGALVGGLAGLAYGYTSLPHRWCLMLAEYAQIVDLCRQAENSGLFPKYD
>NZ_CP006690.1|WP_003563040.1|273575_275123_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSVLTVTGLSQRFLDKVLYQDASFQVNIEDHLGVIGQNGVGKSTLIKILTGTLTPDAGKIVWQKHLHVGYLDQYANLVPGQTVIEFLRTAFSDLYRKEAKMNQIYADYANHPDDDLLAKAGELQQELEAGDFYDLETTIQTVAEGLGITAMGMDHPVEALSGGQRSKLILAKLLLEKPDMLLLDEPTNYLDVSHIAWLTDWLQNFEGAFIVISHDFDFLENVTNAVLDIEFGQITKYTGTLKQAMRQKEADHETYLKAFAKQQETIKKTEAFIRKFKAGTRATMAKSREKQLARMDKLTPPGTRSKAHLAFPYAPVNRQILVDVNDLVVGYDKPLLQPMNFSVAKDQIIAFEGFNGVGKSTLLKTLLGLLPAISGNVEIADNVVFGYYEQELHWDQPKQSPVQYLEQRFPALTQKTVRQVLSRTALTSEEANNPLTMLSGGEQAKVKLADLMLQTTNILVMDEPTNHLDDDTKNALREGLQQYPGAVLLVSHEAGFYDSSWVDTVVNVEQLQVKA
>NZ_CP006690.1|WP_003563042.1|275282_276023_-|class-I-SAM-dependent-methyltransferase
MTEDQAFWNAFAPDYAAAEQASRLPIAHDVIAWLRSTQLLPAHSAVDLAAGTGRYAVQMMPWVQELTLIDWSSAMLAFAKERMHQQADTKAQFIVADWRKLHKPLNADMLFVSQLPTLKPQDLKMLMNWANQTVVLNFQTAQSDALLEQAASLLGLQLPPVYQADPARMTSFKVWLTAQRIPFQSHSLTYEIEEQTTLSDLLPDLATPIGLKTAASLAKTITGHENTHVQVTDRLTYTYTQLVWHV
>NZ_CP006690.1|WP_003568841.1|281597_281912_+|thioredoxin-family-protein
MAIEATKDNLKALTAEGTVVVDFWAPWCGPCKVLDPMLTALEQELPALKVVRYNVEKDHTLPSTMGIMSVPTLVIYQQGEAREKVTGVYPKDKLKRYFEQKLEA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006690_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006690_2

641900-642015

Orphan

Consensus_repeat	Method
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006690_2

>merge|NZ_CP006690|2|641900-642015|CRISPRCasFinder
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGCGGAGGTTTCTGGGCCAGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGCTTTGGTCGTTTTAGGTTCGAGGTCCTTATGC

>NZ_CP006690|2|2|641900-642015|CRISPRCasFinder
CTTTGGTCGTTTAGGTTCGAGGTCCTTATGC	GGAGGTTTCTGGGCCAGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGC
TTTGGTCGTTTTAGGTTCGAGGTCCTTATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006690.1\|WP_003563737.1\|633351_634353_-\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
NZ_CP006690.1\|WP_003659920.1\|642917_643151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563775.1\|644807_645593_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP006690.1\|WP_003563739.1\|634391_634910_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506
NZ_CP006690.1\|WP_003659923.1\|647274_647907_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
NZ_CP006690.1\|WP_003563741.1\|634954_635383_-\|galactose-6-phosphate-isomerase-subunit-LacA	unknown	unknown	gnl\|CDD\|181505
NZ_CP006690.1\|WP_003563735.1\|632298_633237_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
NZ_CP006690.1\|WP_003563750.1\|638416_641542_+\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NZ_CP006690.1\|WP_003563765.1\|643493_644597_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP006690.1\|WP_003563745.1\|636608_637235_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|372595
NZ_CP006690.1\|WP_003563746.1\|637295_638417_+\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NZ_CP006690.1\|WP_003563764.1\|642447_642924_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP006690.1\|WP_003563743.1\|635387_636164_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP006690.1\|WP_003563758.1\|641640_641784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563792.1\|648973_650035_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563785.1\|646517_647042_+\|DUF308-domain-containing-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563776.1\|645595_646264_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376808
NZ_CP006690.1\|WP_003563733.1\|631596_632277_-\|DUF4867-family-protein	unknown	unknown	gnl\|CDD\|379783
NZ_CP006690.1\|WP_003563777.1\|646260_646440_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003563790.1\|647978_648800_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574

Protein	Function_ID	Function_description	E-value
NZ_CP006690.1\|WP_003563737.1\|633351_634353_-\|tagatose-bisphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
NZ_CP006690.1\|WP_003563776.1\|645595_646264_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	4.81778e-31
NZ_CP006690.1\|WP_003563775.1\|644807_645593_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.99527e-22
NZ_CP006690.1\|WP_003563790.1\|647978_648800_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	4.1808e-94
NZ_CP006690.1\|WP_003659923.1\|647274_647907_+\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	6.76065e-11
NZ_CP006690.1\|WP_003563741.1\|634954_635383_-\|galactose-6-phosphate-isomerase-subunit-LacA	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	1.14806e-74
NZ_CP006690.1\|WP_003563735.1\|632298_633237_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	1.89453e-142
NZ_CP006690.1\|WP_003563750.1\|638416_641542_+\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.24406e-77
NZ_CP006690.1\|WP_003563765.1\|643493_644597_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	3.57434e-124
NZ_CP006690.1\|WP_003563745.1\|636608_637235_-\|HAD-IA-family-hydrolase	gnl\|CDD\|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	8.24385e-35
NZ_CP006690.1\|WP_003563746.1\|637295_638417_+\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	4.36447e-49
NZ_CP006690.1\|WP_003563764.1\|642447_642924_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	1.08383e-45
NZ_CP006690.1\|WP_003563743.1\|635387_636164_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.34504e-74
NZ_CP006690.1\|WP_003563739.1\|634391_634910_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	6.20591e-104
NZ_CP006690.1\|WP_003563733.1\|631596_632277_-\|DUF4867-family-protein	gnl\|CDD\|379783	pfam16161, DUF4867, Domain of unknown function (DUF4867). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various human gut Firmicutes and a few eubacteria species. It is also amply represented in human gut metagenomic datasets. Distant homology analysis and marginal HMM overlaps suggest this family is a distant homolog of Ureidoglycolate hydrolase pfam04115, but this prediction is not verified by experiment, therefore the function of this family is still unknown.	8.17986e-88

>NZ_CP006690.1|WP_003563758.1|641640_641784_+|hypothetical-protein
MASLSKEQKKALIAKVEKERQDHPEKKSKKSGFETIDEEAERLESEN
>NZ_CP006690.1|WP_003563750.1|638416_641542_+|SMC-family-ATPase
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERDGGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSDEEQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGTQLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVASQAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQLKQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAKSDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKTQQQTSLDNLGLDELITTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAETQVAATTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAALKQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKTGILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARIDAAEAESALKTMQKNLPAEATDLATVAAQATTLQTTITTYQAQLQEAQARVNALDRQLAGLQADEKHAAAQVTALTKEQAEAKATFTIAVTEYFGADGKQRFAELQLRVSQLPLLNEQVQTYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAEKLAKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRLQVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVEPAGTGRSRLKILHSA
>NZ_CP006690.1|WP_003563746.1|637295_638417_+|exonuclease-SbcCD-subunit-D
MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAKQHKVDAIVIAGDLYDRALPSEAAVSVLDNMLIKLNRDHGYPLLVISGNHDSAVRLRTGRAWYAATKMFVNTQVAEAFTPIELDGVQFFLLPYFEPFAVRDYFQDKTITNVAQAIRPIVAKMKTLFKPDMRHILVSHFFAAGSDHSASETKVNVGGLDAVPLDDLAAFDYVALGHLHNHHALHGEPKIQYSGALLKYAVSEAHQEKGVYIVDTETMDREFVPLKPKHDLIELKASYADLTAPAYYQQQDRDAYIGIDLTDTQVIPNVMAQLRQIYPRIISLRRENGVNAIKPLQERQRDLDPMSLLQTFFKDMTQDDLSAAQIKWAKAGLTTAKKEQA
>NZ_CP006690.1|WP_003563745.1|636608_637235_-|HAD-IA-family-hydrolase
MNTFIFDIDGTLLDNVEAYLYGLQKTLRRHGREVPIHELTWTNGRAGVDSLAELGFSAAEIPEVHEQWREDSKEFLTDIAWFPGMQHALNQLKQTYKLGLVTSKDKTQFIEEDKKFHFSPYFDAIVVAGEAKRNKPFGDPITLARERLGSEPASTIYIGDTPTDAQAAADAKVAFALAGWTTPPSNEVMPRVAVLQQASDLLTLPTLA
>NZ_CP006690.1|WP_003563743.1|635387_636164_-|DeoR/GlpR-transcriptional-regulator
MLKDERLLTIRNLVDRKGIVTVNEIGESLGVSTMTVRRDLEELADQKELVRIHGGAQSTNFKPLTELSRNEKRSIHVNEKRKIAATIAALIIPGDTIYIGPGTTNEMIAQYLKKPDVRIITNSLPVFQSFQDRADFFSLQLIGGRLRARSGAFIGSLANEMLAHLTTTKAFISVNGIADNHISNASPEEGQTQRIALDNAGMKLVVADHFKLNRQDFYSFYDLDQTDGLITDPGISRDDLQHYNTFTHVITDKTNKGE
>NZ_CP006690.1|WP_003563741.1|634954_635383_-|galactose-6-phosphate-isomerase-subunit-LacA
MDVIIGADKDGFAMKEQVKKYLEDHQYRVKDMTPEPAEDFVDSSLAVTKELLGGDAHKAIMFDRYGVGSAMASNKVKGMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLDTEYAGGRHQIRLDMLEKMI
>NZ_CP006690.1|WP_003563739.1|634391_634910_-|galactose-6-phosphate-isomerase-subunit-LacB
MIIAIGNDHIVTMQKIEISNMLKDMGYTVIDEGTYDTHRTHYPIYGKKVAEDVADGRADLGIVMCGTGIGISTAADKNDGIRAAMCDDVTSAVYAREQLNANVLGIGGATVGIHMIQDIVKAYLDATYKETPENKKIIDKIDNIAKPNPEQKDNPHFFDTELEKWAEGVYHD
>NZ_CP006690.1|WP_003563737.1|633351_634353_-|tagatose-bisphosphate-aldolase
MTVTLTAGQYKHLQQLSDDNNVISALAIDQRGSLKKMLAAAANKPADETTIVDFKKAVSEELTKYASSILLDPEYGLPAAKVRAPQAGLLLSYEKTGYDATEPGRFPDLIDDQSALRIKNEGGDAVKFLLYIDPDEPDAINDRKYAFVERVGAEAKANDLPLFLELVSYDGTLNETGTAAWAKVKPDKVIKITKEFSKPQYNVSVLKVEVPVDQKFVEGFTDQGVTPVYTKEEAAKYYKAQSDATDLPFIFLSAGVSNELFLEELKFAKQAGSTFNGVLCGRATWKPGVKPFAAEGEAAGKAWLETEGKANIDRLNKVLAETATPWTDKVEHA
>NZ_CP006690.1|WP_003563735.1|632298_633237_-|tagatose-6-phosphate-kinase
MILTVTLNPSIDVSYPLVHLKIDTVNRVKTVRKTAGGKGLNVSRVIHMLNHEITATGFIGGYFGKWLENQLDRDGIDHDFFPIDAETRSSIAMLHDGGEQTEILEAGPTIAAEDAEKFLSHFDSLLDKSDLITISGSMPQGLPADYYTQMIAHAGQKNVKVLLDTSGATLKSALEAPVKPLLIKPNEEELGGLLNREVDKTDYAALKQDLIDPIFDGVDWIVVSLGAAGAFVKHLDKFYHAAIPKIKVVNPVGSGDSTLAGLAMGIHDGKSDEDIMKTAMTTGMLNTMEAETGFVNPAKFDEYFAKVTIESY
>NZ_CP006690.1|WP_003563733.1|631596_632277_-|DUF4867-family-protein
MSTIDQLRTLNPDKTIHSLDEAAFADYGVTYAQYDVSELKAFMDQHVTIPAPSEANLYIPSNPDMERIPVVQQIGRDVYAGLPIEAGECAGHADALTAVEFHQGSEVNVFFTDVVMVIGKRGQMHDGQFNAEKDAKLFFVPAGTVVEFFSDTLHYSPCEAHASGFKFIVMLVRGSNQPLPADYHTDNKLIVKQNKFQVVHASRTDKIKQGIQVGVTGELVQVKHLN
>NZ_CP006690.1|WP_003563764.1|642447_642924_+|Hsp20/alpha-crystallin-family-protein
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWVDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
>NZ_CP006690.1|WP_003659920.1|642917_643151_-|hypothetical-protein
MFRFLIAPFRALQKNHPNDHTYRWDDFNDSMITATAAILIDFCLLTHGFCPLTAEVPLLFMLAMQSVNLGSADDEHY
>NZ_CP006690.1|WP_003563765.1|643493_644597_+|A/G-specific-adenine-glycosylase
MTNKLINWPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQFPTVGALAKAPEAEVLKAWEGLGYYSRARRLQQAAKQIVADYGGVWPQTSETLQTLSGIGPYTAGAIASISFGEPVPAIDGNTFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRPGDFNQAVMDLGSSYMSANHPDPAHSPVRDFDASYRDGVVSAYPVKTKKPRPVLHRYFALVIRSEKGYLLEQRPSTGLLADLWMFPLVDMADLESTMMSAQLDEVSTLFAASSGMQLTFADLGAKTVKHTFTHQQWQLTLIGVETAASDLSFLPARWVKADHFSELALPTVQKKLNAALGMN
>NZ_CP006690.1|WP_003563775.1|644807_645593_+|alpha/beta-hydrolase
MTVKVTRDIAYGDAALQKLDFYEPEKSNGAAILDIHGGGWFRGEKNKEGEMAERFAALGYTVAVPNYRLAPEAFFPAARDDVLAAFSWLREHTKGLQLGVFGSSAGGSLSVDVGLAEGVPTVSWSGIFDIRQWFADHPAVVAQPDTKTDFVKTASAKIDQGGRNDPFYKWFILNYVDSDETKFPEVEPFDRLTAQAGPLYLANSQEEIIPISGIYQLAHAAEKLGLPVTLQSIPGGQHAEGYLDEAWQGTVAFFAQYLLKG
>NZ_CP006690.1|WP_003563776.1|645595_646264_+|NAD(P)H-dependent-oxidoreductase
METLVVVSHPEIEKSDTQQFLKASAASLSQVVWHHLDSRLPFDVTAEQQAITSADRLIFQFPLYWYMAPASLHQWLTDVWLKQFVYDARGGLLHGKSLGFVVTFSQPATAYQLGGSVGFSISQFLTPYAALAAKTGLTLLPPLTIAQFANQTDLEHQQLLVRYQQYLTLDHPDRPDEQAQWFIDRLSGNADTQLLADQLAAQTDDIDRLRLTLHELKAGESE
>NZ_CP006690.1|WP_003563777.1|646260_646440_+|hypothetical-protein
MTTDEQWLVNAAAVQEKQATSYENAAFFRALQAFVTQQAKRRESLEGEIDGRSWNHEQW
>NZ_CP006690.1|WP_003563785.1|646517_647042_+|DUF308-domain-containing-protein
MQTMFDRLQRWSWLRGLLMILIGAWILIAPRQVYRSFLWIVAAVLIIAAIPKLIDGFSTRKASGTYGTSLFTGGFYLLLALMVPVIVRPLMSLGPLLLGIVLMIYGVNKILSARNRQQFVNVSVWPTVIYGVVLLIMGFIMALNPFRTVMMVFSFFGGLLVVMGILQLFTRPRA
>NZ_CP006690.1|WP_003659923.1|647274_647907_+|hypothetical-protein
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIAHIQTVINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
>NZ_CP006690.1|WP_003563790.1|647978_648800_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MANEFPQVMTIGGTDSDGSAGVQADLHSFFMRGVYGATILTAAVAGNSYGIQDSMVMPLPFIDAQFKSLAADLHIRAAKTGMLADRALVQNIIKNWQQYDFGALVVDPVIITKHGAMLLEQDAYDAVKNELIPLATVVTPNHYEAEHLTGMKLDTDAQTEAAAHQLQDSGAKNIVLKGAHDDPTQPTVRDFVLLESGKSFWLSEPYHATDRVNGTGDTLSAVITAEIGKGNSVEEAIRIAKRFTNQAIGHPIAVGHQYGPINHWANKIVYPQF
>NZ_CP006690.1|WP_003563792.1|648973_650035_-|hypothetical-protein
MLNLNDAHLAALITKPLTVAQARQQIGTAYQQEADRLANSPLWESNDEALTALLASYTNLLGNKLYQALQNLTSIPTPFLQTLWLQDTTADAHHSEIAVIQTTQDDNNTLLTIVDPLSDDAKLKAVNLPTLLQITAADSNAMTYDAETVKALSALAKALNQGGYRFTTVDETVLQPVNGLSFKTRFDNLKPLVAKKAVIKAGDFSIGTSLDQDAKVLGYQVLDEDGHDWQDLGSEEVKNDRFEWASTTVPQELVNHRLKLIIRVSAGSNSPALDELFVIASNNAILMRQGAKAGVYELPLPNQKIFTVMINPANNMVYLKYPDPETQIIELNHQYPFIGEWLKAVLPQKRAFN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP006690_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006690_3

1797215-1797335

Orphan

Consensus_repeat	Method
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP006690_3

>merge|NZ_CP006690|3|1797215-1797335|CRISPRCasFinder
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACCAACGTGTAAGGGCCTTGGTCGCAATGACCATTGTGCGGCCATCCCACTTACACTACGGTTTCTAAACGCGTTCGCCACCCCAGAAACC

>NZ_CP006690|3|3|1797215-1797335|CRISPRCasFinder
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC	AACGTGTAAGGGCCTTGGTCGCAATGACCATTGTGCGGCCATCCCACTTACACTA
CGGTTTCTAAACGCGTTCGCCACCCCAGAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006690.1\|WP_003566085.1\|1807642_1808836_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP006690.1\|WP_003566052.1\|1789520_1790801_-\|hydroxymethylglutaryl-CoA-reductase,-degradative	unknown	unknown	gnl\|CDD\|153082
NZ_CP006690.1\|WP_003566067.1\|1796388_1796994_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227029
NZ_CP006690.1\|WP_003566063.1\|1794292_1795111_+\|aldose-1-epimerase	unknown	unknown	gnl\|CDD\|185696
NZ_CP006690.1\|WP_003566050.1\|1788370_1789537_-\|hydroxymethylglutaryl-CoA-synthase	unknown	unknown	gnl\|CDD\|213655
NZ_CP006690.1\|WP_003566072.1\|1798771_1799524_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224026
NZ_CP006690.1\|WP_003566074.1\|1799516_1800416_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NZ_CP006690.1\|WP_003566061.1\|1793616_1794180_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP006690.1\|WP_003566079.1\|1802467_1805128_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP006690.1\|WP_003566058.1\|1792638_1793469_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP006690.1\|WP_003566068.1\|1797720_1798185_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP006690.1\|WP_003566083.1\|1806812_1807640_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP006690.1\|WP_003566056.1\|1792338_1792638_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003566081.1\|1805435_1806593_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP006690.1\|WP_003566076.1\|1800412_1801408_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380548
NZ_CP006690.1\|WP_003566065.1\|1795170_1796310_-\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349944
NZ_CP006690.1\|WP_003566054.1\|1790812_1791994_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP006690.1\|WP_003566078.1\|1801893_1802331_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006690.1\|WP_003566048.1\|1786292_1788047_-\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
NZ_CP006690.1\|WP_003566070.1\|1798177_1798630_-\|SprT-family-protein	unknown	unknown	gnl\|CDD\|235290

Protein	Function_ID	Function_description	E-value
NZ_CP006690.1\|WP_003566085.1\|1807642_1808836_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.24724e-43
NZ_CP006690.1\|WP_003566052.1\|1789520_1790801_-\|hydroxymethylglutaryl-CoA-reductase,-degradative	gnl\|CDD\|153082	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR), class II, prokaryotic enzyme is a homodimer. Class II enzymes are found primarily in prokaryotes and Archaeoglobus fulgidus and are soluble as they lack the membrane region. Enzymes catalyze the synthesis of coenzyme A and mevalonate in isoprenoid synthesis. Bacteria, such as Pseudomonas mevalonii, which rely solely on mevalonate for their carbon source, catalyze the reverse reaction, using an NAD-dependent HMGR to deacetylate mevalonate into 3-hydroxy-3-methylglutaryl-CoA. Human and bacterial HMGR differ in their active site architecture.	0
NZ_CP006690.1\|WP_003566067.1\|1796388_1796994_-\|ECF-transporter-S-component	gnl\|CDD\|227029	COG4684, COG4684, Predicted membrane protein [Function unknown].	7.14562e-17
NZ_CP006690.1\|WP_003566063.1\|1794292_1795111_+\|aldose-1-epimerase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	5.64258e-24
NZ_CP006690.1\|WP_003566050.1\|1788370_1789537_-\|hydroxymethylglutaryl-CoA-synthase	gnl\|CDD\|213655	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.	1.26452e-154
NZ_CP006690.1\|WP_003566072.1\|1798771_1799524_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	7.00008e-96
NZ_CP006690.1\|WP_003566074.1\|1799516_1800416_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	4.77747e-94
NZ_CP006690.1\|WP_003566061.1\|1793616_1794180_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.30041e-36
NZ_CP006690.1\|WP_003566079.1\|1802467_1805128_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP006690.1\|WP_003566058.1\|1792638_1793469_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.188e-08
NZ_CP006690.1\|WP_003566068.1\|1797720_1798185_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.67331e-15
NZ_CP006690.1\|WP_003566083.1\|1806812_1807640_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_CP006690.1\|WP_003566081.1\|1805435_1806593_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.83637e-45
NZ_CP006690.1\|WP_003566076.1\|1800412_1801408_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	3.33545e-104
NZ_CP006690.1\|WP_003566065.1\|1795170_1796310_-\|M20-family-metallopeptidase	gnl\|CDD\|349944	cd08659, M20_ArgE_DapE-like, Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like. Peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) like family of enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this family are mostly bacterial and have been inferred by homology as being related to both ArgE and DapE. This family also includes N-acetyl-L-citrulline deacetylase (ACDase; acetylcitrulline deacetylase), a unique, novel enzyme found in Xanthomonas campestris, a plant pathogen, in which N-acetyl-L-ornithine is the substrate for transcarbamoylation reaction, and the product is N-acetyl-L-citrulline. Thus, in the arginine biosynthesis pathway, ACDase subsequently catalyzes the hydrolysis of N-acetyl-L-citrulline to acetate and L-citrulline.	1.94339e-127
NZ_CP006690.1\|WP_003566054.1\|1790812_1791994_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	1.47814e-180
NZ_CP006690.1\|WP_003566048.1\|1786292_1788047_-\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
NZ_CP006690.1\|WP_003566070.1\|1798177_1798630_-\|SprT-family-protein	gnl\|CDD\|235290	PRK04351, PRK04351, SprT family protein.	5.42742e-83

>NZ_CP006690.1|WP_003566067.1|1796388_1796994_-|ECF-transporter-S-component
MTQRGKAYNIAIIGILGALIILQAYIPMVGYVQIFPAWPAISTIHLTVIIGGIVLGYGGGASLGLLWGLTSLIRAYTSATDPVTLLLFRNPIIAIVPRVMVGLVAAFIFHQLFKKKQTPLAQTVKMVFAGVVGALTNTLLVIGFTWLMFASKAAQIVPGADATNLGWLLMTALAINAVAEALLGGIVTPILGHALLRFRRK
>NZ_CP006690.1|WP_003566065.1|1795170_1796310_-|M20-family-metallopeptidase
MTEEEQVVDLLSAMVKIPSVAAKEGQVADLIETFLAPELKAGLIKRERISYAPGRDNLVLTIGNPNAQRWLGVDGHMDVVDPGNVNKWQFPPFSAHVEDGKLYGRGATDMKSGLAAAVVAFKQAAHEKLDHGIQLMATVGEEVDNDGARQLSAAGYGDRLTGLLVAEPGNSNVDAAERGIIDYTLTAHGKAAHSSRPDLGANAIHGLFAFANAALTATAPLQAKEDPILGHATHNIDIIHGGNQINSIPESAYLRGNIRTTMIADNDAFIAALKQAAKTTVPKGVRLSLSIDSVLGAAAASPDNDLIQLVQTARQRAGLNRGQVAYRTGITDAALFYHDGLDLAIYGPGNETSHETDEYVTLKDVFDSVKVFKDVFMNY
>NZ_CP006690.1|WP_003566063.1|1794292_1795111_+|aldose-1-epimerase
MQLSAKIFAKVGSERITQYSLVNDHQMTLRFLTFGARVQQVRLPNAAGDDPNLLLGFVTLEDYLHQPGYLGAFTGPLQAADAELAPGSWQNWNWAVKTSQETDLAITFTLTLPENADGQPGQRELSITHRLTNDNLWQIDMQVATTADLKIHPRLNLPWMLTADPAQTMLSAKLTADEHVTPVPKTARCETAQRYSLAAADWQLAYLSDASFTRIDSYAGINSENNFNGILGQPNVAVGFSPEMNQDALPWVLPAGTTWRHHAEFHLSSNAN
>NZ_CP006690.1|WP_003566061.1|1793616_1794180_-|restriction-endonuclease
MRTLLKKAYQLLWGLFILALAYSFWARSFLPRQLRQYGDPASFGIISLFVVINAIMLYHHHFRFRDLKMETVDIMEGEKFESFCAYLLKRNGFNHIQLTQASGDQGIDIIARKKGKTIGFQCKRYTGFVGNKAVQEVWAGHHFYQLDEAAVITNSEFSDSAIALADDLGVMLIDRKKLRRLMRRLPS
>NZ_CP006690.1|WP_003566058.1|1792638_1793469_-|sugar-phosphate-isomerase/epimerase
MLLGLKASTDQRQIRDRLQYHPDVFEFHLTENDFTEAGWSHFVQMAALVQSLVPTVVFHHPMRFRGQRNELAMNPTKYPTRYDFLMTSSVKLMNFAKKANATALIHGGYRVDTPGDYAGWTDVGKAQDVALARMIAFAQEAPGHVVFENSMSPIFRYGDPTFEDRLLRWHLPLAYDTSHTFIVLHGDNDRLMASLAHLRPLIRHYHLVDSMGQTHDSLPLGRGRIDWARVLPLLNQNASRIYEIGLKDQFDCREMIESHHYLESVAKRLAATKHPA
>NZ_CP006690.1|WP_003566056.1|1792338_1792638_+|hypothetical-protein
MRVTDLLALLADQNKNASVLLDTKPTPSRFDDFKLTTVNDQPQLVFQPNPERKAALRVWELQLLLNQPDLQQRFVYLADVDEPRALFGFVKRQIGLLLN
>NZ_CP006690.1|WP_003566054.1|1790812_1791994_-|acetyl-CoA-C-acyltransferase
MEEVVILSAKRTPIGKLGGDLAGASAVDLGVAAAQAAIKAARIDPALLNQAIFGNVMQAGSGQNVARQIGLKSGMATSSTAMTVNEVCGSGLKAVRLGQAAIQLGEADAVLVGGTESMSQVPYYAEAVRSGHKFGDTTLVDGLSRDGLNDAFSQQPMGITAENVATQFNVSRQEQDEFALRSHLRAAAAAAEGRFKSQIAPVTIAARHGDVIVDRDSAIRPDTSLAKLAQLPPVFEVGGTVTAGNASGINDGAAALILMAKSKAEQLGLHYLATVTGFAEVGIDPAIMGYAPKLAIDKILQATGGSIAAIDQIELNEAFASQSVAVARDLGLKDEQFNINGGALALGHPLGASGARILISLLYDLAERNQRQGIAALCVGGGIGIAMQIAMHV
>NZ_CP006690.1|WP_003566052.1|1789520_1790801_-|hydroxymethylglutaryl-CoA-reductase,-degradative
MKFYELSPEKRRDQLVQEGWLTTQDAALLAGTHSLPEVTGARLIENAIGEFPLPLGVARNLLVNGQLHQVPIADEEPSVIAAASNGARLATANGGVRTHVAAHRVVAEVVLTNLTDLVQARQTILAHQTDIQKVIAVAHPSMIQRGGGLDQLTVESLGAQFLKIRLTLDPQQAMGANYANTVAEAVAAAVTSWVDGDVLVSILTNAPTELVTAEVSLEPVSLATKALSGDVIAKKIVQLSDLAFVDAERAVTHNKGILNGIIGAVLATGNDTRAVAASIGAFACASGRYQPLSRWYMDQGHLVGHLQLPLPMGAVGGAIGALPMAQVVRRLGGYQNLAIMQQVIAALGLVQNLAAMRALAGPGIQAGHMKLQANALAIAAGATETELPMLVNALRQGSMDLKHAQQYLTTIRLNKKVGQSKDENRD
>NZ_CP006690.1|WP_003566050.1|1788370_1789537_-|hydroxymethylglutaryl-CoA-synthase
MKIGIDAIAMDTPDFYVDLVKLAQVRGDDPDKYTIGIGQDEQAVPPSSQDIVTMGANAATKLLTPAIRASLGMVLVGTESGVDASKSAALFIHDLLALPEWVRAVELKEACYGGTAALMMARDYIAAHPDKTVLVIAADIARYGLATAGEVTQGAGAVAMLIKAEPHIMTIEDDSVYRSESIDDFWRPVYQDTAIAQGKYSTEQYLAFFQAIWSRYQTQRHHTASDFAAMTFHLPYTKMGKKALKLVLPDTDEATGERLQRRFEASTRYCRRVGNIYTGSLYLGLLSLLDNDTSLKARDRIGLFSYGSGAVAEFFSGILQPDFAAQLHAANHAKMLADRQELTVPEYEAVFSDKVPYDPEDYRSDPTYYHGQFVLTGVIGQERQYQQR
>NZ_CP006690.1|WP_003566048.1|1786292_1788047_-|pyruvate-oxidase
MTEKINAADAMIKVLEDWGIHNIYGLPGGSFDSTMNALYNRRHTINYVQVRHEEVGALAAAGEAKVTGRIGATFGSAGPGAVHLLNGLYDAQYDNVPVLALVGQVPTAAMNTNYFQEMNENPMFADVSVYNRTAMTAEQLPHVVDEAIRQAYKHNGVAVVTIPKDLGWTQIDDNYVSSANLYQKPLLPDPDPDQVAAAWDILKDAKKPILYVGNGARGARDEIIAFSEKTHIPIITTALAKGIVPDDYKANMGSAGRVASKPGVEVARGADTVLFLGSDFPFQPYFIAPNAKYIQVDIDGSKFGRRHTVDLAVLADAKKFIKALSEKADQLPESAWYRAALANKENWREWMTSFEDDGSTPLRVEPIFKLINEMAEKDAIFQVDVGNVTINGMRYLKTNDDQVFTTSGWYATMGYALPAAIGAQAEFPDRQVWSISGDGGFAMVMQDILTQVKYHMPIINVVLTNESLGFIEAEQDDTQQPHSGVDLIDADYGKAAEALGAQGFEVHNLDELKAAFAKAKDRKGPVVIDVKISDLRPIPVEQLVLDKQTQDPAAVDAFVKKYHAESLIPFRQLLEDAEKPVTNA
>NZ_CP006690.1|WP_003566068.1|1797720_1798185_+|GNAT-family-N-acetyltransferase
MLREAQFIDLGAIVHLYQQLTAEMATMAPETYRPLTSDNRQYFADYLQNDLARLFVTETAGTLSGFALVVLARTGDNAEFVPQHFAQLIDLYVIPAQRHQGLAKQLMDAVTAFAKSHDATFIQLNVLNANQTAQQVYAKAGFEPVSLIFQKPLN
>NZ_CP006690.1|WP_003566070.1|1798177_1798630_-|SprT-family-protein
MTDQELQARVEAISLKAFHQPFRHHAVFNNRLKTTGGRFHPADMNLDFNPKLFAVYPASVTDGIIKHELVHYHLYDHHRGYQHRDHDFKQLLTAVGGSRFAPPLPVNGHQYVYVCTHCGRQFVRRRHIDVRRYACGVCRGKLRLQKTLAS
>NZ_CP006690.1|WP_003566072.1|1798771_1799524_-|ATP-binding-cassette-domain-containing-protein
MAELTLTNVTVNIPVGTEVKTLLQDVNLTVAKGEFLTVLGNNGAGKSTLFNAITGDMPVSGGTITLADQTLNGKRPEQRARHIARVFQDPKMGTAPRMTVAENLLLASHRGQRLTLRSRGMTASKAALKTLAAKTGNGLADALDKPTEQLSGGQRQALSLLMATMRKPDLLLLDEHTAALDPHTSQAIMQLTNEIVSDQQLTCLMITHQVEDALRYGNRLIVLDAGKIVADFDQAKKAAMSRDDVLAFFS
>NZ_CP006690.1|WP_003566074.1|1799516_1800416_-|branched-chain-amino-acid-ABC-transporter-permease
MSIGVSAIGQGLLYGLIGLGLFLTFRVLDFPDMTVEGTFPFGAALAVSAITHGISPIVATLLATGAGMLAGLATGLLTTKGKIPVLLAGILVMTGLFSINLRIMGRANLSLLHQANLFQTAFLKDLPPYFNSVVIGVIVAVVVVGLLMLFLNTQLGQAFIAAGDNPSMARSLGIDPDHQMVLGLMVGNGLVGLAGGLLAQNNGYADVNMGIGIIVIGLAAIIIGEVVFGELTLSQRLVAVILGSILYRFVLLVVLALGFNADDLKLISAVVLAIAIMVPQIDHRLRLRRVLQKGVQAHG
>NZ_CP006690.1|WP_003566076.1|1800412_1801408_-|ABC-transporter-substrate-binding-protein
MKRMLGLIFIMAAFLGIAYFQTGTTTPQTQATPTVGILQLTTHPALDAIHKGIIDGLKEKGYVAGKNVKIDFQNAENDQSNLKSMSERFTEEHAAATVGIATPSAQALANVNQKTPIILGAITDPVAAKLVKNVKRPGGNITGVSDQAPIAAQLKLIRQIMPNAKTLGVIATSSDDSAQTQAKMVEKLGPKQGFTVKRYAISSTNDLNQVATQMVSQVDAIFVPTDNTVASAMQTLVAVANTRKVPIFPTVDTMVEQGGLATIGLDQHHLGVLTGRMLADILSGKTKPATTPIHFETTGKLILNEKQAKLLGIDLPSSLIKTAEAKGTVIK
>NZ_CP006690.1|WP_003566078.1|1801893_1802331_-|hypothetical-protein
MNKQQMKLANYGTTINAVVEATQDNQEKMAPLFEPLRKAIDENKLADYDLEAYQQTQTVFSEGTSNYEALLVKLQQVAAPARLLGPHHTLVRDFAAFTEACKAMTASLHADRQVDVAAFNAAEKAQDEAIQKFTKQIQKISVMLS
>NZ_CP006690.1|WP_003566079.1|1802467_1805128_-|cation-translocating-P-type-ATPase
MANKPPYALSSEAVLKQEQTSLTGLTKEAAQTRLNENGPNELAQAEKKGMLARFLDQFKDFMIIVLLVAALIAGFLLSEWADAGIILAVVLLNAVFGVFQESKAEEAIDALKEMSTPNAHVRRGDQVLTIPSSQLVLGDIVLLEAGDVVPADLRLVESANLKIEESALTGESVPVDKTTAPLDADDVGIGDRTNMAFMNSNITYGRGVGVVIATGMQTEVGRIAGMINSAEETNTPLQENLKSLGKTLTVMILVIAVIVFAVGIWRQAASLPEMFLTAVSLAVAAIPEGLPAIVTIILALGTQKMAKRHALVRKLPAVETLGSTDIIASDKTGTLTQNKMTVEKVYYDGQLNDASAGIHGGNPLMTIMNFANDTQVQDDGKLLGDPTETALVAYGKTQNYDVAKALTGEPRIAEVPFDSERKLMTTVHRRADGKLLVATKGAPDELLKRVTDLATGENTAPLSDSERDAILKANKDMATQALRVLGMAYKVIDTLPEKVDSDTVENHMIFAGLVGMIDPERPEAEAAVAEAKAAGIRPMMITGDHRDTAEAIAVRLGIIDQGDDDAVITGAELDQQSDDEFAKNVAKYSVYARVAPEHKVRIVNAWQKKGKVVAMTGDGVNDAPALKAADIGIGMGITGTEVSKGASDMVLADDNFATIVVAVEEGRKVFSNIQKAIQYLLSANLGEVLTLFMMTMLGWDLLAPVHILWINLVTDTFPAIALGVEPTEPGIMKQKPRGRKSNFFSGGVGPAVIWQGILEGLLTLGVYWIAITYPVHSGSAAIHADALTMAYATLGLIQLFHAFNVKSIHQSLFTVGAFRNKAFNWAILASFVLLAVTILVPGFNGLFHVTSLDWHQWITVLGAGVAMIVIVEIVKVFERARRKQRA
>NZ_CP006690.1|WP_003566081.1|1805435_1806593_-|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKAKSAKTVTKVVRQDRGKSKEEILAMTLDRAATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRRYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLSLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG
>NZ_CP006690.1|WP_003566083.1|1806812_1807640_-|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>NZ_CP006690.1|WP_003566085.1|1807642_1808836_-|serine-hydrolase
MRASKRRSQHRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYEIELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGGYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15068 : 49399

Lactobacillus_phage(33.33%)

protease,bacteriocin,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123796592.1\|15068_15932_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	9.0e-24	30.3
WP_079322958.1\|15928_16225_-\|transposase	transposase	NA	NA	NA	NA
WP_003568474.1\|16730_16925_+	hypothetical protein	NA	NA	NA	NA
WP_003568475.1\|16997_17591_-	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003659007.1\|17987_18383_-	hypothetical protein	NA	NA	NA	NA
WP_003568478.1\|18595_18898_-	hypothetical protein	NA	NA	NA	NA
WP_003568480.1\|19176_20034_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003568482.1\|20113_20296_-	hypothetical protein	NA	NA	NA	NA
WP_003659010.1\|20346_20526_-	hypothetical protein	NA	NA	NA	NA
WP_003568484.1\|21014_22250_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_003568486.1\|22453_25027_-	ABC transporter permease	NA	NA	NA	NA
WP_003568488.1\|25039_25741_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-33	40.5
WP_003568490.1\|26020_26572_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003568492.1\|26615_27422_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003568494.1\|27426_27747_+	hypothetical protein	NA	NA	NA	NA
WP_003659016.1\|28586_29090_-	hypothetical protein	NA	NA	NA	NA
WP_038410334.1\|29109_31260_-	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_003568499.1\|31604_32378_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003568500.1\|32555_33161_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003568502.1\|33500_33725_+	hypothetical protein	NA	NA	NA	NA
WP_003568504.1\|33880_34558_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003568507.1\|34722_35616_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003568509.1\|35664_36303_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003568512.1\|36531_37908_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_038410343.1\|38099_39344_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.2e-10	22.7
WP_003562527.1\|39600_39945_-	hypothetical protein	NA	NA	NA	NA
WP_003562540.1\|40020_40380_-	hypothetical protein	NA	NA	NA	NA
WP_003562542.1\|40620_42063_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003562544.1\|42257_42893_+	hypothetical protein	NA	NA	NA	NA
WP_003562546.1\|42942_43254_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003562548.1\|43422_43611_+	hypothetical protein	NA	NA	NA	NA
WP_003562550.1\|43742_44354_-	hypothetical protein	NA	NA	NA	NA
WP_025600126.1\|44711_45185_+	hypothetical protein	NA	NA	NA	NA
WP_003568611.1\|45382_45721_+	hypothetical protein	NA	NA	NA	NA
WP_003562555.1\|46054_46765_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003562558.1\|46751_47081_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_003659037.1\|47318_47609_-	hypothetical protein	NA	NA	NA	NA
WP_003562560.1\|47961_48177_-	hypothetical protein	NA	NA	NA	NA
WP_003562562.1\|48523_49399_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

889199 : 898458

Streptococcus_phage(33.33%)

integrase

attL 882028:882041|attR 898898:898911

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
882028:882041	attL	NA	NA	NA	NA
WP_003564244.1\|889199_892091_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.9e-307	56.2
WP_003564246.1\|892441_892981_+	DUF308 domain-containing protein	NA	NA	NA	NA
WP_003564248.1\|893143_894031_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	31.4
WP_003564250.1\|894027_895056_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	2.3e-90	51.2
WP_003564251.1\|895060_896008_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	9.2e-54	40.7
WP_003564253.1\|896393_896849_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003564255.1\|896965_897556_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.1e-52	52.3
WP_003564258.1\|897960_898458_-\|integrase	tyrosine-type recombinase/integrase	U5U4L5	Lactobacillus_phage	2.2e-59	87.9
898898:898911	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1062859 : 1104295

Lactobacillus_phage(87.5%)

integrase,head,holin,capsid,tail,portal,terminase

attL 1050907:1050920|attR 1093102:1093115

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1050907:1050920	attL	NA	NA	NA	NA
WP_003566493.1\|1062859_1064044_-\|integrase	site-specific integrase	A0A0P0I3D2	Lactobacillus_phage	4.0e-224	99.0
WP_003566492.1\|1064134_1064338_-	hypothetical protein	A0A0P0IQK8	Lactobacillus_phage	6.1e-32	94.0
WP_025598233.1\|1064362_1064788_-	pyridoxamine 5'-phosphate oxidase family protein	A0A0P0I7K6	Lactobacillus_phage	1.7e-60	85.1
WP_003566491.1\|1064851_1065385_-	biotin transporter BioY	NA	NA	NA	NA
WP_003566489.1\|1065534_1065792_+	hypothetical protein	NA	NA	NA	NA
WP_025598235.1\|1065781_1066663_-	hypothetical protein	NA	NA	NA	NA
WP_003566484.1\|1066732_1068076_-	DUF4041 domain-containing protein	A0A1B0Y697	Lactobacillus_phage	1.3e-189	98.2
WP_020967497.1\|1068165_1068516_-	hypothetical protein	A0A1B0Y4P2	Lactobacillus_phage	4.9e-53	93.1
WP_003566479.1\|1068574_1069228_-	hypothetical protein	NA	NA	NA	NA
WP_025598239.1\|1069282_1069705_-	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	4.3e-72	92.8
WP_025598240.1\|1069694_1070033_-	helix-turn-helix transcriptional regulator	A0A1B0Y2R0	Lactobacillus_phage	5.0e-55	97.3
WP_003566474.1\|1070172_1070373_+	helix-turn-helix transcriptional regulator	A0A1B0Y2Q9	Lactobacillus_phage	3.1e-28	98.5
WP_003566473.1\|1070409_1070643_+	hypothetical protein	NA	NA	NA	NA
WP_003566471.1\|1070632_1070830_-	hypothetical protein	NA	NA	NA	NA
WP_003566469.1\|1070917_1071076_+	hypothetical protein	NA	NA	NA	NA
WP_025598242.1\|1071141_1071690_+	hypothetical protein	A0A1B0YE60	Lactobacillus_phage	8.7e-97	96.7
WP_003566467.1\|1071668_1071890_+	helix-turn-helix domain-containing protein	A0A1B0Y6A3	Lactobacillus_phage	4.9e-35	94.5
WP_080661669.1\|1072018_1072270_+	hypothetical protein	A0A0P0I7L5	Lactobacillus_phage	6.5e-07	71.4
WP_025598246.1\|1072256_1072460_+	hypothetical protein	A8YQL1	Lactobacillus_phage	2.3e-10	51.6
WP_003566461.1\|1072471_1073458_+	recombinase RecT	E9LUM3	Lactobacillus_phage	1.7e-47	49.1
WP_003566459.1\|1073477_1074242_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	6.0e-80	56.3
WP_003566457.1\|1074253_1075252_+	DUF4373 domain-containing protein	A0A0P0HRQ2	Lactobacillus_phage	3.1e-100	61.8
WP_003566455.1\|1075264_1075750_+	single-stranded DNA-binding protein	U5U726	Lactobacillus_phage	3.4e-60	83.9
WP_003566453.1\|1075765_1075963_+	hypothetical protein	NA	NA	NA	NA
WP_003566452.1\|1075963_1076218_+	hypothetical protein	U5U728	Lactobacillus_phage	2.2e-34	89.3
WP_003566451.1\|1076214_1076580_+	hypothetical protein	A0A0P0HRU0	Lactobacillus_phage	3.1e-66	99.2
WP_003566448.1\|1076714_1077275_+	DUF1642 domain-containing protein	Q8LTB6	Lactobacillus_phage	5.3e-25	43.0
WP_025598249.1\|1077264_1077582_+	hypothetical protein	C1KFT5	Lactobacillus_virus	1.5e-16	42.1
WP_003566444.1\|1077578_1077854_+	hypothetical protein	NA	NA	NA	NA
WP_003566440.1\|1078043_1078475_+	YopX family protein	A0A2D1GPA7	Lactobacillus_phage	1.0e-36	57.6
WP_003566436.1\|1079334_1079688_+	hypothetical protein	NA	NA	NA	NA
WP_003566434.1\|1079716_1079869_+	hypothetical protein	NA	NA	NA	NA
WP_025598254.1\|1079951_1080389_+	hypothetical protein	A0A2H4J7Z8	uncultured_Caudovirales_phage	7.3e-06	28.6
WP_003566430.1\|1080635_1081163_+	hypothetical protein	NA	NA	NA	NA
WP_003566428.1\|1081604_1082753_+	phage protein	A0A0P0I3G0	Lactobacillus_phage	4.8e-214	94.5
WP_003566426.1\|1082762_1082900_+	hypothetical protein	NA	NA	NA	NA
WP_025598257.1\|1082899_1083484_+\|terminase	terminase small subunit	A0A0P0ID78	Lactobacillus_phage	2.0e-83	92.3
WP_003566422.1\|1083467_1084721_+\|terminase	PBSX family phage terminase large subunit	A0A0P0I3B0	Lactobacillus_phage	9.4e-248	98.6
WP_003566420.1\|1084725_1086153_+\|portal	phage portal protein	A0A0P0IQQ3	Lactobacillus_phage	2.6e-249	91.2
WP_003566418.1\|1086118_1087105_+\|capsid	minor capsid protein	A0A0P0ID43	Lactobacillus_phage	2.6e-176	94.5
WP_003566416.1\|1087114_1087441_+	hypothetical protein	A0A0P0IJR5	Lactobacillus_phage	3.9e-44	78.7
WP_003566414.1\|1087437_1087803_+	hypothetical protein	A0A1Q1PVR6	Bacillus_phage	5.9e-17	53.4
WP_003566412.1\|1087919_1088552_+	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	9.4e-79	86.3
WP_003566410.1\|1088564_1088879_+	hypothetical protein	A0A0P0IJQ8	Lactobacillus_phage	5.5e-48	94.2
WP_003566408.1\|1088892_1089912_+\|capsid	major capsid protein	A0A0P0IZJ7	Lactobacillus_phage	9.5e-190	99.1
WP_080661671.1\|1089926_1090178_+	Ig-like domain-containing protein	NA	NA	NA	NA
WP_003566406.1\|1090247_1090622_+\|head,tail	phage head-tail connector protein	A0A0P0IZF6	Lactobacillus_phage	1.1e-58	91.9
WP_003566404.1\|1090626_1090929_+	hypothetical protein	A0A0P0HRN0	Lactobacillus_phage	3.1e-48	91.0
WP_003566402.1\|1090925_1091291_+	hypothetical protein	A0A0P0IUZ3	Lactobacillus_phage	1.2e-57	95.9
WP_003566400.1\|1091291_1091696_+	DUF3168 domain-containing protein	A0A0P0I3C8	Lactobacillus_phage	4.6e-71	100.0
WP_003566399.1\|1091707_1092313_+\|tail	phage tail protein	A0A0P0ID88	Lactobacillus_phage	1.5e-102	93.5
WP_003566397.1\|1092399_1092735_+\|tail	tail assembly chaperone	A0A0P0IJV9	Lactobacillus_phage	9.4e-54	100.0
WP_003566394.1\|1092833_1093187_+	hypothetical protein	A0A0P0ID51	Lactobacillus_phage	1.5e-54	94.0
1093102:1093115	attR	NA	NA	NA	NA
WP_003566392.1\|1093179_1096515_+\|tail	phage tail tape measure protein	A0A0P0IQK3	Lactobacillus_phage	1.6e-302	89.0
WP_003566390.1\|1096515_1098504_+\|tail	phage tail family protein	Q3L0S3	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	5.0e-211	60.8
WP_003566388.1\|1098504_1101450_+\|tail	phage tail protein	Q3L0S2	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	0.0e+00	65.8
WP_003566386.1\|1101451_1101742_+	hypothetical protein	Q3L0S1	Lactobacillus_rhamnosus_Lc-Nu-like_prophage	1.4e-24	57.3
WP_003566384.1\|1101734_1101866_+	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	3.2e-18	95.3
WP_003566381.1\|1101896_1102283_+	hypothetical protein	U5U712	Lactobacillus_phage	4.3e-66	98.4
WP_025598269.1\|1102263_1102470_+	hypothetical protein	A0A1B0YE97	Lactobacillus_phage	3.2e-12	97.4
WP_003566379.1\|1102466_1102913_+\|holin	phage holin	A8YQK6	Lactobacillus_phage	8.4e-66	95.9
WP_003566377.1\|1102925_1103132_+	hypothetical protein	NA	NA	NA	NA
WP_038410483.1\|1103149_1104295_+	LysM peptidoglycan-binding domain-containing protein	Q6J1W8	Lactobacillus_phage	3.3e-82	51.1

DBSCAN-SWA_4

1500683 : 1605698

117

Lactobacillus_phage(70.37%)

integrase,head,tRNA,holin,transposase,protease,capsid,tail,portal,terminase

attL 1554981:1555000|attR 1596733:1596752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003565699.1\|1500683_1501130_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003565701.1\|1501250_1503479_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	J9Q7H7	Salmonella_phage	1.5e-06	34.3
WP_003565703.1\|1503715_1504039_-	hypothetical protein	NA	NA	NA	NA
WP_003565705.1\|1504065_1504806_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_003565707.1\|1504938_1505886_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_003565709.1\|1506002_1506497_-	DUF3013 family protein	NA	NA	NA	NA
WP_003565711.1\|1506493_1507099_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_003565713.1\|1507204_1507453_+	hypothetical protein	NA	NA	NA	NA
WP_003565715.1\|1507522_1507909_-	YxeA family protein	NA	NA	NA	NA
WP_003565717.1\|1508371_1508554_-	hypothetical protein	NA	NA	NA	NA
WP_003565719.1\|1508553_1508940_-	hypothetical protein	NA	NA	NA	NA
WP_003658131.1\|1510050_1510236_-	hypothetical protein	NA	NA	NA	NA
WP_003565721.1\|1510900_1511491_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003565723.1\|1511483_1512050_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003565725.1\|1512157_1512961_-	N-formylglutamate amidohydrolase	NA	NA	NA	NA
WP_003565728.1\|1513394_1513709_-	DUF960 domain-containing protein	NA	NA	NA	NA
WP_003565730.1\|1513727_1514231_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_003565731.1\|1514554_1515082_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	6.5e-25	41.4
WP_003565734.1\|1515078_1517373_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	5.1e-74	31.6
WP_003565736.1\|1517647_1518019_+	hypothetical protein	NA	NA	NA	NA
WP_003565737.1\|1518342_1518819_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_003565739.1\|1518824_1519058_+	hypothetical protein	NA	NA	NA	NA
WP_003565741.1\|1519149_1520988_-	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.0e-20	25.9
WP_003565743.1\|1521144_1522053_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003565745.1\|1524156_1525320_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.4e-24	27.2
WP_003565747.1\|1525432_1527307_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.6e-140	51.0
WP_003565749.1\|1527336_1527927_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_003565751.1\|1528103_1529150_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_003565753.1\|1529312_1530458_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_003565755.1\|1530459_1531407_-	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
WP_003565758.1\|1531413_1532319_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_003565760.1\|1532330_1533122_-	DUF475 domain-containing protein	S5MAL1	Bacillus_phage	1.8e-34	44.7
WP_013245374.1\|1533520_1534765_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.0e-11	22.4
WP_003565780.1\|1534897_1535251_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_003565782.1\|1535311_1538143_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	5.8e-19	40.0
WP_003565784.1\|1538163_1538463_-	YlxQ-related RNA-binding protein	NA	NA	NA	NA
WP_003565786.1\|1538465_1538759_-	YlxR family protein	NA	NA	NA	NA
WP_003565788.1\|1538770_1540024_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_003565790.1\|1540040_1540520_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_003570427.1\|1540774_1545109_-	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	1.5e-18	36.0
WP_003565796.1\|1545175_1546903_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	1.8e-07	29.9
WP_003565798.1\|1546927_1548169_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_003565800.1\|1548185_1548974_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003570430.1\|1549009_1549762_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	2.1e-21	41.2
WP_003565804.1\|1550291_1550849_-	ribosome recycling factor	NA	NA	NA	NA
WP_003565806.1\|1550848_1551568_-	UMP kinase	NA	NA	NA	NA
WP_003565808.1\|1551803_1552685_-	elongation factor Ts	NA	NA	NA	NA
WP_003565810.1\|1552769_1553558_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_003565812.1\|1553953_1554223_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_032777268.1\|1554212_1554947_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
1554981:1555000	attL	NA	NA	NA	NA
WP_080661708.1\|1555682_1555898_-	hypothetical protein	NA	NA	NA	NA
WP_003563301.1\|1556115_1556589_-	SocA family protein	Q9AZG0	Lactococcus_phage	2.4e-26	41.7
WP_038410525.1\|1556838_1557984_-	LysM peptidoglycan-binding domain-containing protein	Q6J1W8	Lactobacillus_phage	1.9e-90	53.8
WP_003564881.1\|1557994_1558441_-\|holin	phage holin	A8YQK6	Lactobacillus_phage	3.2e-65	93.2
WP_025598812.1\|1558433_1558751_-	hypothetical protein	A0A0P0IZF9	Lactobacillus_phage	3.7e-15	55.6
WP_003564877.1\|1558870_1558996_-	XkdX family protein	A8YQK3	Lactobacillus_phage	1.0e-13	90.2
WP_003564875.1\|1558992_1559322_-	hypothetical protein	A8YQK2	Lactobacillus_phage	2.2e-31	61.5
WP_003564873.1\|1559323_1561759_-\|tail	phage tail protein	Q6J1X1	Lactobacillus_phage	0.0e+00	73.3
WP_025598811.1\|1561759_1563754_-\|tail	phage tail family protein	B4XYQ4	Lactobacillus_phage	7.4e-146	45.6
WP_003564869.1\|1563754_1568596_-\|tail	phage tail tape measure protein	A0A2D1GPD5	Lactobacillus_phage	0.0e+00	81.9
WP_025598810.1\|1568718_1569132_-	hypothetical protein	A0A2D1GPL7	Lactobacillus_phage	3.0e-49	79.6
WP_080661678.1\|1569202_1569418_-	Ig-like domain-containing protein	A0A2D1GPF6	Lactobacillus_phage	3.7e-19	91.5
WP_003564863.1\|1569444_1570053_-\|tail	phage major tail protein	A0A2D1GPC8	Lactobacillus_phage	2.4e-108	97.0
WP_025598808.1\|1570086_1570473_-	hypothetical protein	U5U3W4	Lactobacillus_phage	3.1e-69	96.1
WP_003564860.1\|1570472_1570859_-	HK97 gp10 family phage protein	U5U769	Lactobacillus_phage	2.5e-66	97.7
WP_003564859.1\|1570858_1571188_-\|head,tail	head-tail adaptor protein	B4XYP8	Lactobacillus_phage	2.0e-56	97.2
WP_003564855.1\|1571177_1571537_-\|head,tail	phage gp6-like head-tail connector protein	U5U4K5	Lactobacillus_phage	1.6e-59	97.5
WP_003564853.1\|1571547_1571787_-	Ig-like domain-containing protein	A0A2D1GPN4	Lactobacillus_phage	1.2e-29	93.7
WP_003564851.1\|1571804_1573007_-\|capsid	phage major capsid protein	U5U3Z5	Lactobacillus_phage	1.7e-214	97.2
WP_003564849.1\|1573049_1573679_-\|head,protease	HK97 family phage prohead protease	U5U3W0	Lactobacillus_phage	9.6e-116	98.1
WP_003564847.1\|1573632_1574886_-\|portal	phage portal protein	U5U764	Lactobacillus_phage	5.5e-232	97.6
WP_025598804.1\|1574891_1575086_-	hypothetical protein	U5U6Z9	Lactobacillus_phage	1.4e-22	81.2
WP_003564845.1\|1575097_1576810_-\|terminase	terminase large subunit	Q8LTC3	Lactobacillus_phage	0.0e+00	99.3
WP_003564843.1\|1576831_1577287_-\|terminase	P27 family phage terminase small subunit	U5U3Z1	Lactobacillus_phage	5.2e-79	98.0
WP_003564841.1\|1577487_1578282_-	HNH endonuclease	U5U440	Lactobacillus_phage	1.9e-145	96.6
WP_003564836.1\|1578895_1579231_-	hypothetical protein	U5U7A9	Lactobacillus_phage	5.2e-28	82.9
WP_025598801.1\|1579233_1579563_-	ribonucleoside-diphosphate reductase	A0A0N7IRA2	Lactobacillus_phage	8.1e-50	89.6
WP_003564832.1\|1579549_1580767_-	phage protein	A8YQN3	Lactobacillus_phage	8.9e-235	96.5
WP_003564830.1\|1581186_1581396_+	CsbD family protein	NA	NA	NA	NA
WP_025598624.1\|1581619_1581805_-	hypothetical protein	NA	NA	NA	NA
WP_025598626.1\|1581960_1582491_-	hypothetical protein	NA	NA	NA	NA
WP_032776774.1\|1583293_1583752_-	hypothetical protein	NA	NA	NA	NA
WP_025598628.1\|1584161_1584380_-	helix-turn-helix transcriptional regulator	U5U738	Lactobacillus_phage	6.4e-27	80.6
WP_025598630.1\|1584450_1584738_-	hypothetical protein	Q8LTA8	Lactobacillus_phage	2.2e-51	96.8
WP_003564824.1\|1584749_1585487_-	hypothetical protein	A0A097BY87	Enterococcus_phage	2.0e-48	43.4
WP_003564822.1\|1585488_1585911_-	hypothetical protein	NA	NA	NA	NA
WP_003564819.1\|1585957_1586476_-	exonuclease	NA	NA	NA	NA
WP_003564818.1\|1586475_1587300_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	1.9e-116	74.7
WP_003564817.1\|1587314_1588064_-	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	5.8e-35	56.1
WP_025598639.1\|1588056_1588371_-	hypothetical protein	NA	NA	NA	NA
WP_003564814.1\|1588453_1588651_-	hypothetical protein	NA	NA	NA	NA
WP_003564812.1\|1588732_1589092_-	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	5.3e-63	98.3
WP_003564811.1\|1589158_1589410_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_003564809.1\|1589402_1589582_-	hypothetical protein	NA	NA	NA	NA
WP_025598642.1\|1589582_1590323_-	ORF6C domain-containing protein	A0A1B0YEA7	Lactobacillus_phage	4.7e-45	54.6
WP_003564805.1\|1590397_1590598_+	hypothetical protein	NA	NA	NA	NA
WP_003564801.1\|1590594_1590744_-	hypothetical protein	NA	NA	NA	NA
WP_003564799.1\|1590740_1590989_-	hypothetical protein	A0A0P0ID24	Lactobacillus_phage	1.6e-37	98.7
WP_003564797.1\|1591244_1591589_+	helix-turn-helix transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	1.5e-17	41.1
WP_025598647.1\|1591581_1592004_+	ImmA/IrrE family metallo-endopeptidase	A0A1B0Y2S4	Lactobacillus_phage	4.9e-23	39.6
WP_003564795.1\|1592069_1592867_+	SHOCT domain-containing protein	NA	NA	NA	NA
WP_003564793.1\|1592963_1593152_+	hypothetical protein	NA	NA	NA	NA
WP_025598650.1\|1593315_1593597_+	hypothetical protein	A0A0P0HRW5	Lactobacillus_phage	3.6e-22	53.8
WP_003564789.1\|1593619_1593955_+	DUF1827 family protein	NA	NA	NA	NA
WP_003564787.1\|1594101_1594989_+	diacylglycerol kinase	NA	NA	NA	NA
WP_025598653.1\|1595065_1595329_+	hypothetical protein	B4XYT0	Lactobacillus_phage	4.2e-09	40.2
WP_003564785.1\|1595433_1596609_+\|integrase	site-specific integrase	B4XYR4	Lactobacillus_phage	4.6e-103	49.0
WP_003564783.1\|1596780_1597431_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
1596733:1596752	attR	NA	NA	NA	NA
WP_003570435.1\|1597487_1598882_+	amino acid permease	NA	NA	NA	NA
WP_003564777.1\|1598912_1599704_+	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_003564775.1\|1599801_1601595_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.4e-40	25.4
WP_003564773.1\|1601584_1603342_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.8e-50	27.5
WP_003564771.1\|1603483_1603705_-	YneF family protein	NA	NA	NA	NA
WP_003658561.1\|1603765_1604011_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003564766.1\|1604043_1604220_-	hypothetical protein	NA	NA	NA	NA
WP_003564764.1\|1604446_1604794_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_003564762.1\|1604930_1605698_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_5

2294129 : 2355754

Bacillus_phage(20.0%)

protease,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003567237.1\|2294129_2294969_-\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_003567240.1\|2294981_2295998_-	hypothetical protein	NA	NA	NA	NA
WP_003567242.1\|2296004_2296379_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003567244.1\|2296542_2297814_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_003567246.1\|2298130_2298907_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_003567248.1\|2298924_2299812_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.9e-35	40.5
WP_003567250.1\|2299995_2300892_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_003567252.1\|2300994_2302110_-	PIN/TRAM domain-containing protein	NA	NA	NA	NA
WP_003567254.1\|2302131_2303496_-	DNA repair protein RadA	NA	NA	NA	NA
WP_003567256.1\|2303512_2304055_-	dUTP diphosphatase	J9PV85	Bacillus_phage	8.1e-39	48.6
WP_003567258.1\|2304275_2304566_+	N-acetyltransferase	NA	NA	NA	NA
WP_003567260.1\|2304682_2305060_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003567262.1\|2305304_2306624_+	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	5.4e-60	34.2
WP_003567264.1\|2306946_2308293_+	C1 family peptidase	A0A2H4UTL8	Bodo_saltans_virus	5.3e-47	29.8
WP_003567265.1\|2308520_2309621_+	hypothetical protein	NA	NA	NA	NA
WP_003567267.1\|2309617_2310814_+	hypothetical protein	NA	NA	NA	NA
WP_003567269.1\|2310876_2311755_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-12	26.4
WP_003567271.1\|2311916_2313971_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	9.5e-64	33.3
WP_032774271.1\|2314127_2316758_-	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	1.4e-88	40.2
WP_003567275.1\|2316919_2317543_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003567277.1\|2318043_2318715_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_003567279.1\|2319224_2320346_+	low temperature requirement protein A	NA	NA	NA	NA
WP_003567280.1\|2320359_2320644_+	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_003567282.1\|2320834_2321950_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
WP_003567284.1\|2322137_2322344_-	CsbD family protein	NA	NA	NA	NA
WP_003567286.1\|2322476_2322734_-	hypothetical protein	NA	NA	NA	NA
WP_003567288.1\|2322826_2323033_-	hypothetical protein	NA	NA	NA	NA
WP_003567290.1\|2323257_2323509_-	hypothetical protein	NA	NA	NA	NA
WP_003567292.1\|2323836_2325069_+	MFS transporter	NA	NA	NA	NA
WP_003567294.1\|2325147_2326404_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	56.8
WP_003567296.1\|2326492_2327326_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.1e-46	42.4
WP_003567298.1\|2327642_2327837_-	hypothetical protein	NA	NA	NA	NA
WP_003567300.1\|2328090_2328627_-	hypothetical protein	NA	NA	NA	NA
WP_003567302.1\|2328815_2330039_-	hypothetical protein	NA	NA	NA	NA
WP_003567303.1\|2330628_2331456_-	class C sortase	NA	NA	NA	NA
WP_003567305.1\|2331462_2333022_-	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_003567307.1\|2333018_2334341_-	hypothetical protein	NA	NA	NA	NA
WP_003567309.1\|2334342_2337348_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003567312.1\|2337625_2338183_-	hypothetical protein	NA	NA	NA	NA
WP_003567314.1\|2338277_2339474_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003567316.1\|2339682_2340738_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003567322.1\|2341753_2342083_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003567324.1\|2342079_2342868_+	hypothetical protein	NA	NA	NA	NA
WP_003567326.1\|2342920_2343709_+	hypothetical protein	NA	NA	NA	NA
WP_003567328.1\|2343753_2344032_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567331.1\|2344055_2344340_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567333.1\|2344532_2344829_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567335.1\|2344930_2346286_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003580849.1\|2346591_2346903_-	hypothetical protein	NA	NA	NA	NA
WP_003567340.1\|2346975_2347326_-	hypothetical protein	NA	NA	NA	NA
WP_003567343.1\|2347499_2348879_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_003567347.1\|2348889_2351082_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	8.1e-37	26.7
WP_003567348.1\|2351551_2351677_-	hypothetical protein	NA	NA	NA	NA
WP_003567349.1\|2351866_2353165_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_003567351.1\|2353169_2353976_+	response regulator transcription factor	NA	NA	NA	NA
WP_003659579.1\|2354337_2354535_-	hypothetical protein	NA	NA	NA	NA
WP_003567354.1\|2355081_2355321_+	hypothetical protein	NA	NA	NA	NA
WP_032675994.1\|2355580_2355754_-\|bacteriocin	bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_6

2858859 : 2871801

Lactobacillus_phage(37.5%)

integrase,head,capsid,tail,portal,terminase

attL 2858743:2858762|attR 2873721:2873740

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2858743:2858762	attL	NA	NA	NA	NA
WP_003568329.1\|2858859_2860017_-\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	5.6e-45	32.7
WP_003568331.1\|2860116_2860713_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_123796598.1\|2860872_2861151_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025600015.1\|2861216_2861627_+	hypothetical protein	NA	NA	NA	NA
WP_003568337.1\|2861619_2861757_+	hypothetical protein	NA	NA	NA	NA
WP_003568341.1\|2861975_2862251_+	hypothetical protein	NA	NA	NA	NA
WP_003568343.1\|2862247_2862436_+	hypothetical protein	NA	NA	NA	NA
WP_025600009.1\|2862419_2863247_+	bifunctional DNA primase/polymerase	Q854C1	Mycobacterium_phage	1.5e-12	34.9
WP_003568347.1\|2863239_2864664_+	helicase	A0A1W6JQD6	Staphylococcus_phage	1.0e-64	38.1
WP_003568348.1\|2864933_2865356_+	hypothetical protein	NA	NA	NA	NA
WP_003568350.1\|2865370_2865688_+\|head	phage head closure protein	NA	NA	NA	NA
WP_003568352.1\|2865699_2865873_+	hypothetical protein	NA	NA	NA	NA
WP_025599464.1\|2865866_2866259_+	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	7.7e-23	46.0
WP_003568354.1\|2866413_2866884_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_003568355.1\|2866880_2868584_+\|terminase	terminase large subunit	E9LUI0	Lactobacillus_phage	1.2e-120	40.2
WP_003568357.1\|2868549_2868729_+	hypothetical protein	NA	NA	NA	NA
WP_003568359.1\|2868733_2869915_+\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	4.1e-59	35.0
WP_003568361.1\|2869901_2871446_+\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.1e-39	26.2
WP_003568363.1\|2871507_2871801_+\|head,tail	phage gp6-like head-tail connector protein	A0A2I7QHJ6	Enterococcus_phage	8.3e-06	32.6
2873721:2873740	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006690

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection