CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_018704	Amphibacillus xylanus NBRC 15112, complete genome	1 crisprs	csa3,cas14j,WYL,cas3,RT,DinG,DEDDh	0	1	10	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_018704_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_018704_1

2106882-2107064

Orphan

Consensus_repeat	Method
TTGGGTGCGTTCGCACNNT	CRT

4 spacers

The CRISPR arrays of NC_018704_1

>merge|NC_018704|1|2106882-2107064|CRT
TTGGGTGCGTTCGCACTATGGTGTGGTGCGAATTTTCTTGATTGGGTGCGTTCGCACACTGTTTATGTGCGATATTTTGAATTTGGGTGCGTTCGCACTATCAAGTGGTGCGATTTTTCTTGATTGGGTGCGTTCGCACTATCAAGGAGTGCGAAATCCGGGAATTGAGTGCGTTCGCACCCG

>NC_018704|1|1|2106882-2107064|CRT
TTGGGTGCGTTCGCACTAT	GGTGTGGTGCGAATTTTCTTGA
TTGGGTGCGTTCGCACACT	GTTTATGTGCGATATTTTGAAT
TTGGGTGCGTTCGCACTAT	CAAGTGGTGCGATTTTTCTTGA
TTGGGTGCGTTCGCACTAT	CAAGGAGTGCGAAATCCGGGAA
TTGAGTGCGTTCGCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NC_018704.1\|WP_015010729.1\|2104788_2105556_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|226870
NC_018704.1\|WP_015010727.1\|2101904_2103731_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NC_018704.1\|WP_015010725.1\|2100279_2101149_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187543
NC_018704.1\|WP_015010732.1\|2107815_2108562_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NC_018704.1\|WP_015010723.1\|2097920_2099111_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340839
NC_018704.1\|WP_015010736.1\|2112202_2113240_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NC_018704.1\|WP_015010737.1\|2113349_2114474_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NC_018704.1\|WP_015010740.1\|2117491_2118274_-\|teichoic-acids-export-ABC-transporter-ATP-binding-subunit-TagH	unknown	unknown	gnl\|CDD\|184131
NC_018704.1\|WP_015010731.1\|2107133_2107823_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NC_018704.1\|WP_015010728.1\|2103801_2104689_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NC_018704.1\|WP_015010735.1\|2110761_2111718_-\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NC_018704.1\|WP_015010724.1\|2099107_2100280_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_018704.1\|WP_015010722.1\|2096601_2097714_-\|EpsG-family-protein	unknown	unknown	gnl\|CDD\|379716
NC_018704.1\|WP_041450174.1\|2109616_2110450_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	unknown
NC_018704.1\|WP_015010733.1\|2108819_2109545_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NC_018704.1\|WP_015010730.1\|2105931_2106507_-\|energy-coupled-thiamine-transporter-ThiT	unknown	unknown	gnl\|CDD\|370542
NC_018704.1\|WP_015010726.1\|2101145_2101799_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NC_018704.1\|WP_015010739.1\|2115393_2116575_-\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|367953
NC_018704.1\|WP_015010738.1\|2114608_2115337_-\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|224833
NC_018704.1\|WP_172635010.1\|2095473_2096523_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340840

Protein	Function_ID	Function_description	E-value
NC_018704.1\|WP_015010729.1\|2104788_2105556_-\|tyrosine-protein-phosphatase	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	9.38851e-101
NC_018704.1\|WP_015010727.1\|2101904_2103731_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NC_018704.1\|WP_015010725.1\|2100279_2101149_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187543	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.92015e-76
NC_018704.1\|WP_015010732.1\|2107815_2108562_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	1.05095e-75
NC_018704.1\|WP_015010723.1\|2097920_2099111_-\|glycosyltransferase	gnl\|CDD\|340839	cd03811, GT4_GT28_WabH-like, family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.	3.68509e-29
NC_018704.1\|WP_015010736.1\|2112202_2113240_+\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.20128e-71
NC_018704.1\|WP_015010737.1\|2113349_2114474_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NC_018704.1\|WP_015010740.1\|2117491_2118274_-\|teichoic-acids-export-ABC-transporter-ATP-binding-subunit-TagH	gnl\|CDD\|184131	PRK13546, PRK13546, teichoic acids export ABC transporter ATP-binding subunit TagH.	1.54388e-116
NC_018704.1\|WP_015010731.1\|2107133_2107823_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	5.04656e-84
NC_018704.1\|WP_015010728.1\|2103801_2104689_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	4.59358e-178
NC_018704.1\|WP_015010735.1\|2110761_2111718_-\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	2.76238e-18
NC_018704.1\|WP_015010724.1\|2099107_2100280_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	7.39944e-24
NC_018704.1\|WP_015010722.1\|2096601_2097714_-\|EpsG-family-protein	gnl\|CDD\|379716	pfam14897, EpsG, EpsG family. This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.	3.20055e-16
NC_018704.1\|WP_015010733.1\|2108819_2109545_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.04194e-53
NC_018704.1\|WP_015010730.1\|2105931_2106507_-\|energy-coupled-thiamine-transporter-ThiT	gnl\|CDD\|370542	pfam09515, Thia_YuaJ, Thiamine transporter protein (Thia_YuaJ). Members of this protein family have been assigned as thiamine transporters by a phylogenetic analysis of families of genes regulated by the THI element, a broadly conserved RNA secondary structure element through which thiamine pyrophosphate (TPP) levels can regulate transcription of many genes related to thiamine transport, salvage, and de novo biosynthesis. Species with this protein always lack the ThiBPQ ABC transporter. In some species (e.g. Streptococcus mutans and Streptococcus pyogenes), yuaJ is the only THI-regulated gene. Evidence from Bacillus cereus indicates thiamine uptake is coupled to proton translocation.	1.38571e-54
NC_018704.1\|WP_015010726.1\|2101145_2101799_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	1.73791e-87
NC_018704.1\|WP_015010739.1\|2115393_2116575_-\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	8.30267e-135
NC_018704.1\|WP_015010738.1\|2114608_2115337_-\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|224833	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane].	2.17801e-87
NC_018704.1\|WP_172635010.1\|2095473_2096523_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340840	cd03812, GT4_CapH-like, capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).	2.3755e-103

>NC_018704.1|WP_015010730.1|2105931_2106507_-|energy-coupled-thiamine-transporter-ThiT
MQSKRTLFFIEVAIFTALALILDIIPFLSFKIWAQGGSISFAMIPVFIVAFRWGLKGGLLSGLLFGILQVATGTAWIGHPIQGILDYPIAFMVLGFAGLLAPAVQAALKNNNTKRFVGMVTVGVLIGITLRFITHYVAGVVFFESLIEGMNIWVYSLVYNSSYLIPSFVINVAAVSFLFNKRPHLVAATTK
>NC_018704.1|WP_015010729.1|2104788_2105556_-|tyrosine-protein-phosphatase
MIDIHCHILPGVDDGAKHLEDSVAMARLAVAEGIHTIIATPHHKNGRYNNPKKSVLSDLTRLNDRIQQEEIPLTILPGQEVRVHGELIEGYEADEILTLNGASRYIFIELPTEHIPRYTEQLLFDIQMKDLIPIIVHPERNTVLREQPGQLYHFVRNGALTQITAASLVGKFGTKIKKFTHELIEHNLTHFIASDAHNTKSRGFYMREANQIITEQYGQHTLFTFMDNAQQIVDNKMVYIDEPIMIKRKKFLGLF
>NC_018704.1|WP_015010728.1|2103801_2104689_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MAKVKKAIIPAAGLGTRFLPVTKAMPKEMLPIVDKPTIQYIVEEAVASGIEDIIIVTGKGKRAIEDHFDFAPELEQNLKAKNKLDLLHKVEQSTNLADIHYIRQKEPKGLGHAVWCARKFIGDEPFAVLLGDDIVESDVPCLKQLINQFEDKQSSVIGVQQVPEALTERYGIVDPGAKVNGRLYEVDHFVEKPPLGTAPSNLAIMGRYVFTPEIFRFLERHQIGAGGEIQLTDAIQMLNEIQKVYAYDFQGRRYDVGEQLGFIETTIEFALKNKEIGEDVKKLLFDLTDQLRAEE
>NC_018704.1|WP_015010727.1|2101904_2103731_-|polysaccharide-biosynthesis-protein
MSYRKRLISLILLDSLMIATAIFLAAWVVYPARSDWDTNIVCFSAIGLLIFHFIYALIFKLYHKIWAYASVKELKAIIYSVTLANLSTAVFQYFINDFKIYRRAMLVTWLIHLTVIGGSRFIWRVFRDHYINPNPNRKRTLIIGAGDAGAMIARQLTNGQTDVDLNPIGFVDDDPMKQKMHVFNLPVLGTTEEIEAIVEAKQIEHIIIAIPSIRNGELKAIINRCNNTAKKVQILPKLEDLATGRVSVKMLRNIDVEDVLGRPPVELDIDAISTYVTDNTVMVTGAGGSIGSEICRQLMRFNPSRILLVGHGEFSIYTIEKELQKTYGHTTTEIIPLIADVQDRDRIFNIVKQYQPWIIYHAAAHKHVPLMEYNPHEAIKNNVIGTKNVAEAADVFNVHTFVLVSTDKAVNPTNVMGGTKRIAEMIIQDLATRSKTKFVAVRFGNVLGSRGSVIPLFKEQIAEGGPVTVTHPEMTRYFMTIPEATRLVIQAGTLANGGEIFVLDMGEPVKIVDLAKNMINLSGYSTDDIEIKFTGIRPGEKMYEELLNKDEIHPREVYEKIYIGKTDQVDINPVLQLIDTFEQFDNVQVKDAIMDIVFAEQKIKTSIS
>NC_018704.1|WP_015010726.1|2101145_2101799_-|sugar-transferase
MNYMTTKRLIDIILSLLGLILLSPIFLILIIAIKIDSRGPVLFKQKRIGIHKSHFHILKFRTMRIDTPKDTPTHLLDNPDQWITRVGKFLRKTSLDELPQIINIVKGEMSIIGPRPALWNQFDLIAERDKYGANDVPVGLTGWAQINGRDELPIEIKAKLDGEYVDRIGFIMDVKCFFGTIVSVFKSDGVVEGGTGVKAKAAEENSNNSKAEETVAK
>NC_018704.1|WP_015010725.1|2100279_2101149_-|NAD-dependent-epimerase/dehydratase-family-protein
MKNILITGKNSYIGTSLQNWLMREPDKYKVDTVDMKDGSWKEKDFGSYDVVFHVAGIAHVSSDPKMEDLYYKVNRDLTIETAKKAKAEGVKQFIFMSSIIVYGDSSSTKRVIDRNTVPTPSNFYGNSKLQAEEGIKHLESDDFKIVVVRPPMIYGKGSKGNYPRLANMAKKIPVFPDIDNERSMLHIDNLCEFIKVMIDHEETGLYFPQNKEYVKTSELVRLIGEVHGKKIVMTKLFNPVLRLMFGIGIVNKVFGNLVYEKSMSNYDKANYRIKDFKDSIELTELESGQ
>NC_018704.1|WP_015010724.1|2099107_2100280_-|glycosyltransferase-family-4-protein
MNENGVDILLMGDNGLDTVGGEQESTKIIINGSKDKYSLGVIQPGKVSKPKPGVEYFDLTEHTRIKHLVKNPLDFIRYILKVRKIINDKKPKVIHTQAQVSFFIVALLKKFRLISKDNHLIHTERGLYTKYNKPFKQLFFFFMKELNTLVTTTEFNMKYWREALEVKRFSLDYKIIENTAGDLFEAYDEVVGKADEGILTVGFAGRYTAWKNWPLAVEISEKLDKVLGDSLHVKMAIGCLDEKALEETKAMYGKLEQTFGSRFDGKININLEEMDKFYYDIDVFILTSNHNTESFGRTLVEAMSRKTIVLTTDAGGSVEVVGNKNNVHKTADEFVDKVMEFFKNKNEMAEEKERNMRRVREVYSLENNLSKHLEMYEEIIGDVYSEDVKI
>NC_018704.1|WP_015010723.1|2097920_2099111_-|glycosyltransferase
MRLAFAHDHLFQEDEQGNLYTGGSFNNQAWKRYLNHFDEIIVLARKEKLDNKYNNKTYNNFDLKETKLEPVPSISGPIKQFSNKKEAEDIIRKTLIDSDALIARLPSETGNLAIRIAKKLNKPYAVEVVACVWDALWNHGSLMGKIYAPIAMHKMKKKVYESPYTLYVTNEFLQKRYPTKGKTTNVSNVEISSVFEKAYEIRNSRLEGKTIYKIGMIGSLKNRIKGWDVALNALSILKSNGIDFEFHILGDGEVEQWANLADKLGIRDKVKFCGVLPGGEPVLNWLDEMDLYIQPSFQEGLPRAVIEAMSRGCPVVGSNAGGIPELIDLNCIHKAGEYKDLAASIEKAISNKEYSMMLTKQNIEASKQYEKSELDKKRNEFWASFINEIDRLNKVK
>NC_018704.1|WP_015010722.1|2096601_2097714_-|EpsG-family-protein
MFSSYTVYIATVLLSSVFASLAQKYSRTNKKGIRIPNKFFWFISMAILIFIMGFREYTIGVDGANYIRGYDIANSMSFIDYYSTFTTEPGFYLLYRLVYFIFNDYQWLFIITAAITIACFYKAFSYEIDNISLGLAVFIFASTQYFYYFGIMRMGVAVSIIAVAYRYILQNEKKKYIWMVLIATLFHYSAPFALAALFIKPNQITNRFKNSTLIKIMILIPLGFYGVRYLIYPFISASRYQGYIDSTGTISLGFLTSSLPFLILFSFFYNMLVAKNKSYQFYFFLFIIKLFTEIFAPVIGIGRMVWYVNISICFLLPASIRVNRDHMIKLLVLVFIILYSAVYSYNAYFGDSFRGGYMLPYENVFFKLVN
>NC_018704.1|WP_172635010.1|2095473_2096523_-|glycosyltransferase-family-1-protein
MSIYRNIDKTKIQFDFLVSKHEEGEYDEEILRLGGKIYRVRSRREGFLKNKSDLNQFFREHDYQIVHVHVSSMTNIQSIKSAKKNKVSTRIIHCHNTQGPKGLMHEFMHRYNRLIIDRYCTDKFACSADAAMWGFGKKKTNKGKVNIFNNAINTTKFVYKDEVRKEKRKELGVEDSFVIGHVGRFVEQKNHGFIINIFNELIKIEKKAKLLLVGVGRLEEDIKRQIEELGIEKSVFMLGSRADVNELMQAMDVFLFPSLFEGLGIVAIEAQAADLHVFASDVVPKEANISELFHSLSLNDEPLKWAEEILKYSKNKARIDRTEDIIKSNYDIKANTEWITNFYLDHAKN
>NC_018704.1|WP_015010731.1|2107133_2107823_-|CpsD/CapB-family-tyrosine-protein-kinase
MAKHKRPVKQAARHLITKLNPRSPISEQFRTIRTNLQFTAVDDTLETMLVTSANPSEGKSLTIANLAIVFAQQEKKVLLVDADMRKPTVHYTFRIDNRRGLSSLLVGEYELNEAAIKSDVPNLDILPSGPIPPNPSELLGSNKMRRLIDEAKDQYDLVIFDTPPVLAVTDAQLLANFVDGSLLVIRSKQTDQESAIKAKELLEPAKAKLLGAVLNDVQTSKDQYYYYGE
>NC_018704.1|WP_015010732.1|2107815_2108562_-|capsular-polysaccharide-biosynthesis-protein
MEETITLKEIAQIIKKRLGLIIVLTIGSAIISGIFTYFFITPIYRANSQFLVNQNQPNATVELNEIRTNVELINTYSVIIRSNRILDEVIDELQLTISPSALAEKISVTNENGSQVVTVSATDPDPKMAVDLANVTVEVFQDQIDELMNVDNVNILNPAVLPANPTPVSPNLTLNIAIAFVLGGMVGVGLAFLFEYLDTTVKTETDVEKIVGLPVIGVVAKVQETDLVHIQQHANRRQARERGVTYNG
>NC_018704.1|WP_015010733.1|2108819_2109545_+|EAL-domain-containing-protein
MLIDHFIEKRLFTHNFQPIYHLNSHQCLGFEALMRPFDFPNPELAFEAAKRAGRLYDLDTASIELVMRSFRDSRLSDGDAVLFINVLPSTLINPNFSTFIYHTLHTNQLRADQIVLEISESEQMDQLLDSFHMIHDLVDYGFQFALDDVGKGYSNFDVIIEFPFKYIKLDRLFSTQLHLSSKKKALVQLFRDYCRDQQIQLVLEGLETRQEYLFAMQLGVEVAQGYFLGRPKAIEEVRAFL
>NC_018704.1|WP_041450174.1|2109616_2110450_+|zinc-ribbon-domain-containing-protein
MICGKCQTINNDDAKFCINCGKQIDHLKQNPVENEPEVKVEATATQATDENPTSAAGAESVQPPKRPMEPDPTIEMAKEIGQSFWNYLLNGLKAPYQASKEVGAKQADLINGLITLIIFSAFLPLSVYLSGTMLMAGWGRPSFIRTVVIPFFLFILFIAITVAVLFAVARLMNSKIDFLQVFTRFMTFMIIPAGLALLSFVVSIFNAYLFSTILMSLVFLTMFLASIATIFTIKDTKEKPGGLDVTYVIIIHFLIMTIVLLLFSDALIGQLINQMMW
>NC_018704.1|WP_015010735.1|2110761_2111718_-|NERD-domain-containing-protein
MKIVLPLSKTELHQQSEILLKRYPRRDKILDELQDIYRREEAGYQGEKQLDYYLNLSDLAGAYSLAGLRLKGDKHYFQIDRMILTQSVCIIIESKNLKGQLLLNEEDQLIQQTSDSQKIYENPYTQVKLQAKQLRQVLNQLGYSDLPIHPLVVFTNKNAILNLGGTPDLIALHRLTFRIDEILNFYQRIQNPKMIQNLAYRLLSKHTVRRENILEKFNLNIYSIRTGVLCSDCERGKMVRVHGTWICEFCKQQNQQAHISALSDYAKIVNPLITNKTARYFLEVESRFTVYRIFKDLNLPISGNRNSTHYDLSKIIPV
>NC_018704.1|WP_015010736.1|2112202_2113240_+|LCP-family-protein
MKKDNQAPSRLVKREVKKKQRNKKLIIFLVVPIVLLFLLIISYGVSVFFKAQQVVDNSFESDGRDGGSELREDEIDPNVDNVSILFIGVDQGGTRGNSGHGLSDALILATLNKEENSVKLLSIPRDSYVYVPERDRYTKINHAHSYGGAKATIETVENLLEVPIDYFVRINFDAFIDIVDTLNGVKVDVPYEIKEMDSNDTKGAIHLLPGEQWLNGEEALAFARTRKKDNDIERGKRQQQLISAMVDRAVSINTIFNIDALMTAVGDNMSTSMNFKDIVSFTNYGLKGNLQIESLNLEGSDLWTDAYYFQIDEQSLAETKQILQEHLGLTSPASAYSTEDSDDNL
>NC_018704.1|WP_015010737.1|2113349_2114474_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MEKIKVMVVFGTRPEAIKMAPLVRELQERSSEFELIVTVTAQHREMLDQVLDVFGVKPNYDLNIMKKKQTLAEITTRALNGLNDIIEETSPDIVLVHGDTTTTFAASLASYYQQVAVGHVEAGLRTWNKHSPFPEEINRQLTSVIADIHFAPTEKSKQNLISENIAQDHIYVTGNTAIDALKTTVSDTYSHPILDEIGDKRLVLLTAHRRENLGGNMEQMFRAIKRLVEAHRDIYVVYPVHLNPVVQQTAADILADSDRIQLIEPLGVIDFHNFAARSHLILTDSGGVQEEAPSLGVPVLVLRDTTERPEGIDAGTLKLAGTDEDTIFNLANQLLTDQEEYDRMAQAKNPYGDGEASRRIADAILAYFNVEKDK
>NC_018704.1|WP_015010738.1|2114608_2115337_-|WecB/TagA/CpsF-family-glycosyltransferase
MVRDVSELINIMGIPFNNLSKQDLIDNITASDTGKNFIVTANPEIVMEARNNLAYKNSITKSDYIIADGIGIIIASKLLKQPLSERIPGYELMMTMIEYASKNQKSCYFLGASEEVNQAAVRKLKEKFPELIIAGHHHGFFKLDDESIVNDVRKTQPDFVFVALGMPRQEQWIANNIDSFSKGVFMGVGGSFDVVAGEVQRAPEIWIKLNLEWLYRLIKQPSRFKRILKVFEFIFRMIIRKY
>NC_018704.1|WP_015010739.1|2115393_2116575_-|CDP-glycerol-glycerophosphotransferase-family-protein
MYALRTIAPIIYRIAFRVASLLPQNENTIVFESFLGNQYSDNPKAIFLYIKENHPEFKLYWSLNKEVIPSFLNEDIQIIKRLSLKWVLTMARAKYWVTNTRLPLWIPKRTNTVYLQTWHGTPLKKLGVDIEEVRMPGTTTEKYRRNFINEAVKWDYLVSPNPYSTEIFKRAFQFQGKVIESGYPRNDVLQKGLTSREDILKEMNLPLNKKIILYAPTWRDNQFYTVGKYKLNLHLDLELFKKEFGDNFIILLRSHYLISENINIENYSGFVYDFSSYKDISDLYLVSDVLITDYSSVFFDYAILGRPILFFVYDIEEYRDQLRGFYFDMENYAPGPLLKTNDQLIEALKKLDLDNFKPDQNYQSFIKKFCSLEDGNATKRVVDTLLESENHTL
>NC_018704.1|WP_015010740.1|2117491_2118274_-|teichoic-acids-export-ABC-transporter-ATP-binding-subunit-TagH
MNKRIVLKNISKKYKLYKNQKERVLDLILPREYGEDFWALNNIDFEADEGDVVGFVGINGSGKSTLSNIIAGIVPATTGTIEVNGQVSLIAVSSGLKAELSGRDNIELKCLMLGFSKKEIKAMEDDIIEFAELEQFIDQPIKSYSSGMRARLGFAISVTVDPDILIVDEALSVGDKAFSEKSLAKMQEFKNRGKTMIFVSHSIAQMRQFCDKILWLEYGKIKEYGEADKVLKNYEAFLKEFKNLNKQQREEYRKKALGLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_018704_1	1.2\|2106942\|22\|NC_018704\|CRT	2106942-2106963	22	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	84680-84701	2	0.909
NC_018704_1	1.2\|2106942\|22\|NC_018704\|CRT	2106942-2106963	22	MH078572	Staphylococcus phage phiSA_BS1, complete genome	39533-39554	2	0.909

1. spacer 1.2|2106942|22|NC_018704|CRT matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 2, identity: 0.909

gtttatgtgcgatattttgaat	CRISPR spacer
atttatgtgctatattttgaat	Protospacer
.********* ***********

2. spacer 1.2|2106942|22|NC_018704|CRT matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 2, identity: 0.909

gtttatgtgcgatattttgaat	CRISPR spacer
atttatgtgctatattttgaat	Protospacer
.********* ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

155990 : 224265

Bacillus_phage(29.41%)

capsid,holin,head,protease,portal,tail,tRNA,integrase,terminase

attL 189272:189331|attR 225281:225366

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015008893.1\|155990_156737_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_015008894.1\|156933_157371_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_015008895.1\|157391_157784_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_015008896.1\|157921_158947_-\|integrase	site-specific integrase	H7BVE3	unidentified_phage	6.4e-61	38.8
WP_015008898.1\|159540_159909_+	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	2.0e-44	72.1
WP_015008899.1\|159901_162034_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	0.0e+00	85.4
WP_015008900.1\|162488_163235_+	N-6 DNA methylase	A0A2H4YF91	Aeromonas_phage	2.8e-05	34.4
WP_015008901.1\|163227_167571_+	Eco57I restriction-modification methylase domain-containing protein	A0A2H4UUH6	Bodo_saltans_virus	1.6e-20	24.0
WP_155835442.1\|167915_169094_+	hypothetical protein	NA	NA	NA	NA
WP_015008903.1\|169354_169768_+	hypothetical protein	NA	NA	NA	NA
WP_015008904.1\|169890_170220_+	hypothetical protein	NA	NA	NA	NA
WP_015008905.1\|170702_172163_+	ABC transporter permease	NA	NA	NA	NA
WP_015008906.1\|172197_172869_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-29	34.3
WP_015008907.1\|172861_174373_+	PASTA domain-containing protein	NA	NA	NA	NA
WP_015008908.1\|174679_175429_+	hypothetical protein	NA	NA	NA	NA
WP_172635016.1\|175586_175994_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_015008910.1\|176087_176804_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_015008911.1\|177054_177288_+	YuzF family protein	NA	NA	NA	NA
WP_015008912.1\|177326_178217_+	manganese catalase family protein	NA	NA	NA	NA
WP_015008913.1\|178478_179717_+	HDOD domain-containing protein	NA	NA	NA	NA
WP_015008914.1\|179813_180518_+	N-acetylmuramoyl-L-alanine amidase CwlD	A0A067ZJB6	Vibrio_phage	4.5e-13	31.5
WP_155835515.1\|180612_181626_+	P-loop NTPase	NA	NA	NA	NA
WP_015008916.1\|181674_182292_-	hypothetical protein	NA	NA	NA	NA
WP_155835516.1\|182364_183018_-	polysaccharide deacetylase family sporulation protein PdaB	NA	NA	NA	NA
WP_015008918.1\|183294_183510_+	hypothetical protein	NA	NA	NA	NA
189272:189331	attL	NA	NA	NA	NA
WP_015008919.1\|189409_190570_-\|integrase	site-specific integrase	S5MNZ2	Brevibacillus_phage	4.6e-39	30.8
WP_015008920.1\|190650_191124_-	ImmA/IrrE family metallo-endopeptidase	A0A2I7SC21	Paenibacillus_phage	1.7e-48	60.1
WP_015008921.1\|191128_191449_-	helix-turn-helix transcriptional regulator	Q8W5Y0	Listeria_phage	7.9e-26	58.1
WP_041450062.1\|191980_192310_-	hypothetical protein	NA	NA	NA	NA
WP_015008923.1\|192373_192556_+	helix-turn-helix domain-containing protein	Q5YAA3	Bacillus_phage	4.8e-12	58.3
WP_015008924.1\|192569_192764_+	hypothetical protein	NA	NA	NA	NA
WP_015008925.1\|192825_193152_+	hypothetical protein	NA	NA	NA	NA
WP_015008926.1\|193243_194041_+	hypothetical protein	NA	NA	NA	NA
WP_015008927.1\|194041_194302_+	hypothetical protein	NA	NA	NA	NA
WP_015008928.1\|194309_194471_+	hypothetical protein	NA	NA	NA	NA
WP_015008929.1\|194457_195210_+	phage antirepressor KilAC domain-containing protein	A0A0B5A507	Paenibacillus_phage	9.4e-86	63.0
WP_015008930.1\|195283_196333_+	DnaD domain protein	A0A0S2SXI2	Bacillus_phage	4.7e-51	69.8
WP_015008931.1\|196337_196688_+	HNH endonuclease	A0A1U9WQN8	Geobacillus_phage	1.2e-30	60.8
WP_015008932.1\|196706_197162_+	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	1.0e-42	57.0
WP_015008933.1\|197171_197441_+	hypothetical protein	NA	NA	NA	NA
WP_015008934.1\|197882_198188_+	hypothetical protein	NA	NA	NA	NA
WP_015008936.1\|198969_199308_+	hypothetical protein	A0A0C5AN02	Paenibacillus_phage	1.4e-28	65.0
WP_015008937.1\|199323_199737_+	hypothetical protein	NA	NA	NA	NA
WP_015008938.1\|199793_200234_+	hypothetical protein	NA	NA	NA	NA
WP_015008939.1\|200868_201087_+	hypothetical protein	NA	NA	NA	NA
WP_172634997.1\|201198_202029_+	hypothetical protein	NA	NA	NA	NA
WP_015008941.1\|202210_203134_+	DUF4868 domain-containing protein	Q24LC1	Clostridium_phage	6.9e-38	28.2
WP_015008942.1\|203156_203702_+	hypothetical protein	A0A090DC14	Clostridium_phage	2.7e-13	33.1
WP_015008943.1\|203785_204085_+	hypothetical protein	NA	NA	NA	NA
WP_015008944.1\|204159_204339_+	hypothetical protein	NA	NA	NA	NA
WP_041450063.1\|204344_204767_+	hypothetical protein	NA	NA	NA	NA
WP_015008946.1\|204897_205221_+	HNH endonuclease	D2XR61	Bacillus_phage	3.1e-30	58.3
WP_015008947.1\|205327_205645_+\|terminase	P27 family phage terminase small subunit	A0A0U4B062	Bacillus_phage	3.9e-17	48.0
WP_015008948.1\|205641_207312_+\|terminase	terminase large subunit	A0A0U4B089	Bacillus_phage	3.1e-198	62.2
WP_155835444.1\|207615_208662_+\|portal	phage portal protein	A0A2H4JAJ1	uncultured_Caudovirales_phage	2.7e-123	64.7
WP_041450064.1\|208669_209404_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A0U4B047	Bacillus_phage	3.3e-67	60.0
WP_015008951.1\|209410_210580_+\|capsid	phage major capsid protein	A0A0U4JIF4	Bacillus_phage	8.5e-142	68.9
WP_015008952.1\|210582_210738_+	hypothetical protein	A0A059T7Y2	Listeria_phage	1.2e-08	63.3
WP_015008954.1\|211068_211416_+\|head	phage head closure protein	A0A0U4JE41	Bacillus_phage	7.8e-27	49.6
WP_015008955.1\|211420_211801_+	hypothetical protein	A0A290FZT5	Caldibacillus_phage	9.8e-23	53.6
WP_015008956.1\|211808_212123_+	hypothetical protein	A0A2H4JAG4	uncultured_Caudovirales_phage	2.2e-28	59.3
WP_015008957.1\|212122_212695_+\|tail	phage tail protein	A0A2H4J534	uncultured_Caudovirales_phage	9.4e-62	61.5
WP_015008958.1\|212698_213073_+	hypothetical protein	NA	NA	NA	NA
WP_172634994.1\|213147_213291_+	hypothetical protein	Q0H231	Geobacillus_phage	1.5e-05	53.3
WP_015008960.1\|213472_216946_+\|tail	phage tail tape measure protein	D2JLF7	Staphylococcus_phage	5.3e-91	59.5
WP_015008961.1\|216959_218393_+\|tail	phage tail family protein	A0A142F1N1	Bacillus_phage	8.1e-78	35.6
WP_015008962.1\|218404_222022_+\|tail	phage tail protein	A0A142F1N2	Bacillus_phage	7.0e-118	54.0
WP_015008963.1\|222018_222198_+	hypothetical protein	NA	NA	NA	NA
WP_155835445.1\|222200_222431_+	hypothetical protein	NA	NA	NA	NA
WP_015008965.1\|222503_222827_+	hypothetical protein	NA	NA	NA	NA
WP_155835446.1\|222982_223129_+	hypothetical protein	NA	NA	NA	NA
WP_015008967.1\|223203_223470_+	hypothetical protein	NA	NA	NA	NA
WP_015008968.1\|223812_224265_+\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	4.1e-20	44.4
225281:225366	attR	NA	NA	NA	NA

DBSCAN-SWA_2

437217 : 445422

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009166.1\|437217_438513_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	7.7e-19	32.1
WP_172634999.1\|438534_439290_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	2.3e-39	37.6
WP_015009168.1\|439286_439538_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_015009169.1\|439534_440212_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_015009170.1\|440195_442424_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.7e-141	39.2
WP_015009171.1\|442399_443821_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	4.9e-51	32.2
WP_015009172.1\|443813_444842_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	7.4e-65	43.5
WP_015009173.1\|444831_445422_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.7e-26	37.6

DBSCAN-SWA_3

481131 : 489470

Lactococcus_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009209.1\|481131_482421_+\|transposase	IS21 family transposase	A0A059NT83	Lactococcus_phage	6.2e-45	31.0
WP_015009210.1\|482413_483169_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.7e-56	45.4
WP_015009211.1\|483475_484588_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	4.1e-77	47.1
WP_015009214.1\|485369_486059_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.4e-29	32.0
WP_015009215.1\|486141_487065_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	5.3e-46	48.8
WP_015009216.1\|487057_487825_+	ABC transporter permease	NA	NA	NA	NA
WP_155835447.1\|487867_488755_+	GHKL domain-containing protein	A0A1V0SGX0	Hokovirus	2.4e-11	26.9
WP_041450083.1\|488768_489470_+	N-acetylmuramoyl-L-alanine amidase	H7BVK7	unidentified_phage	1.4e-43	41.7

DBSCAN-SWA_4

1029468 : 1081609

Bacillus_phage(37.5%)

coat,transposase,holin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155835470.1\|1029468_1030032_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.6e-53	63.4
WP_015009716.1\|1030016_1030295_-\|transposase	IS3 family transposase	A0A1P8CWP5	Bacillus_phage	2.0e-25	63.0
WP_051007549.1\|1030555_1030978_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_015009718.1\|1031002_1031821_+	glutamate racemase	NA	NA	NA	NA
WP_015009719.1\|1031911_1032970_+	GerMN domain-containing protein	NA	NA	NA	NA
WP_015009720.1\|1033076_1033832_+	ribonuclease PH	NA	NA	NA	NA
WP_015009721.1\|1033828_1034440_+	XTP/dITP diphosphatase	C7C699	Ugandan_cassava_brown_streak_virus	4.3e-12	30.1
WP_015009722.1\|1034439_1034958_+	metallophosphoesterase	NA	NA	NA	NA
WP_015009723.1\|1035332_1035605_+\|holin	phage holin family protein	A0A2H4JAH4	uncultured_Caudovirales_phage	3.7e-16	55.8
WP_015009724.1\|1036269_1037208_+	NERD domain-containing protein	NA	NA	NA	NA
WP_015009725.1\|1037830_1038010_-	H-type small acid-soluble spore protein	NA	NA	NA	NA
WP_015009726.1\|1038297_1039284_+	hypothetical protein	NA	NA	NA	NA
WP_015009727.1\|1039454_1040741_+	trigger factor	NA	NA	NA	NA
WP_015009728.1\|1041071_1042343_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.6e-148	62.8
WP_015009729.1\|1042422_1044744_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.6e-171	42.5
WP_015009730.1\|1044745_1045330_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_015009731.1\|1045497_1045980_-	hypothetical protein	NA	NA	NA	NA
WP_015009732.1\|1046317_1047292_+	stage VI sporulation protein D	NA	NA	NA	NA
WP_015009733.1\|1047357_1047546_-	hypothetical protein	NA	NA	NA	NA
WP_015009734.1\|1047977_1050620_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.6e-162	41.9
WP_015009735.1\|1050816_1052544_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.1e-15	33.3
WP_015009736.1\|1052628_1053891_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_015009737.1\|1054070_1054535_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_015009738.1\|1054524_1054962_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_015009739.1\|1054973_1056488_+	pilus assembly PilX N-terminal domain-containing protein	NA	NA	NA	NA
WP_015009740.1\|1056510_1058127_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_015009741.1\|1058139_1059174_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_015009742.1\|1059189_1060392_+	type II secretion system F family protein	NA	NA	NA	NA
WP_015009743.1\|1060629_1061004_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_015009744.1\|1061106_1061862_+	prepilin peptidase	NA	NA	NA	NA
WP_015009745.1\|1061891_1062854_+	pilus assembly protein PilM	NA	NA	NA	NA
WP_015009746.1\|1062887_1063436_+	hypothetical protein	NA	NA	NA	NA
WP_015009747.1\|1063428_1063983_+	hypothetical protein	NA	NA	NA	NA
WP_041450111.1\|1064095_1064932_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_015009749.1\|1065112_1065682_+	DNA repair protein RadC	NA	NA	NA	NA
WP_041450112.1\|1066090_1067197_+	hypothetical protein	NA	NA	NA	NA
WP_015009752.1\|1067702_1068734_+	rod shape-determining protein	NA	NA	NA	NA
WP_015009753.1\|1068758_1069637_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_015009754.1\|1069636_1070182_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_015009755.1\|1070220_1070901_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_015009756.1\|1070893_1071691_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_015009757.1\|1071868_1072585_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_015009758.1\|1072571_1073426_+	stage IV sporulation protein FB	NA	NA	NA	NA
WP_015009759.1\|1073436_1074888_+	ribonuclease E/G	NA	NA	NA	NA
WP_015009760.1\|1075015_1075324_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_015009761.1\|1075335_1075668_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_015009762.1\|1075682_1075973_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_015009763.1\|1076573_1077095_+	Spo0B domain-containing protein	NA	NA	NA	NA
WP_015009764.1\|1077107_1078388_+	GTPase ObgE	NA	NA	NA	NA
WP_015009765.1\|1078428_1078878_+	ACT domain-containing protein	NA	NA	NA	NA
WP_015009766.1\|1078902_1079763_+	prephenate dehydratase	NA	NA	NA	NA
WP_015009767.1\|1079805_1080345_-	transcription repressor NadR	NA	NA	NA	NA
WP_015009768.1\|1080658_1081609_+\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA

DBSCAN-SWA_5

1102086 : 1110652

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009788.1\|1102086_1102890_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-16	32.0
WP_015009789.1\|1102906_1103566_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_015009790.1\|1103626_1104673_-	N-acetylmuramoyl-L-alanine amidase	C8CHK8	Thermus_virus	1.6e-11	32.7
WP_155835524.1\|1105219_1106488_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	8.4e-10	23.1
WP_015009792.1\|1106501_1108283_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.6e-14	28.9
WP_015009793.1\|1108626_1109289_-	RsfA family transcriptional regulator	A0A1D6X8E5	Bacillus_phage	3.2e-05	40.0
WP_015009794.1\|1109380_1110652_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	6.0e-101	48.6

DBSCAN-SWA_6

1173242 : 1182332

Helicobacter_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009858.1\|1173242_1175057_+	DNA primase	A0A1S5RH72	Helicobacter_phage	1.9e-39	28.9
WP_015009859.1\|1175095_1176214_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.7e-38	36.2
WP_015009860.1\|1176376_1176922_+	hypothetical protein	NA	NA	NA	NA
WP_015009861.1\|1176942_1177650_+\|tRNA	tRNA (adenine(22)-N(1))-methyltransferase TrmK	NA	NA	NA	NA
WP_015009862.1\|1177642_1178755_+	Nif3-like dinuclear metal center hexameric protein	J3IYW3	Acanthamoeba_polyphaga_lentillevirus	1.4e-13	36.0
WP_015009863.1\|1178880_1180191_+	DEAD/DEAH box helicase	A0A0N9Q9J4	Chrysochromulina_ericina_virus	7.0e-44	32.1
WP_015009864.1\|1180204_1181095_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.2e-25	33.0
WP_015009865.1\|1181182_1181467_-	DUF2624 domain-containing protein	NA	NA	NA	NA
WP_015009866.1\|1181630_1182332_+	transglycosylase SLT domain-containing protein	A0A0K2CNS6	Brevibacillus_phage	3.4e-05	26.4

DBSCAN-SWA_7

1252461 : 1260245

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009945.1\|1252461_1252899_+	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	1.1e-20	49.2
WP_015009946.1\|1252983_1253334_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_155835528.1\|1253506_1254238_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.6e-13	28.0
WP_015009948.1\|1254244_1254820_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.3e-14	35.1
WP_015009949.1\|1255032_1255935_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	5.2e-22	34.5
WP_015009950.1\|1255935_1256517_+	spore maturation protein	NA	NA	NA	NA
WP_041450287.1\|1256521_1257052_+	spore maturation protein	NA	NA	NA	NA
WP_015009952.1\|1257152_1257896_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_041450126.1\|1258014_1258731_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-45	42.0
WP_015009954.1\|1258730_1260245_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	3.8e-25	31.4

DBSCAN-SWA_8

1432176 : 1494850

Streptococcus_phage(30.0%)

transposase,tRNA,integrase,coat

attL 1424471:1424485|attR 1456281:1456295

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1424471:1424485	attL	NA	NA	NA	NA
WP_015010126.1\|1432176_1433616_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1X9I6C6	Streptococcus_phage	2.1e-09	28.2
WP_015010130.1\|1435875_1436424_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	3.6e-87	86.0
WP_015010131.1\|1436428_1437565_-	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	2.1e-161	72.1
WP_015010132.1\|1437557_1437875_-	hypothetical protein	A0A2K5B2A7	Erysipelothrix_phage	2.4e-22	59.0
WP_015010133.1\|1437849_1438068_-	hypothetical protein	A0A2I4R673	Erysipelothrix_phage	2.9e-19	59.7
WP_015010134.1\|1438110_1438638_-	hypothetical protein	NA	NA	NA	NA
WP_015010135.1\|1439026_1439215_-	hypothetical protein	NA	NA	NA	NA
WP_015010136.1\|1439230_1440019_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015010137.1\|1440228_1442112_-	ImmA/IrrE family metallo-endopeptidase	E4ZFJ9	Streptococcus_phage	9.7e-55	27.2
WP_015010138.1\|1442159_1442702_-	hypothetical protein	NA	NA	NA	NA
WP_015010139.1\|1442876_1443080_+	helix-turn-helix domain-containing protein	A0A2K5B261	Erysipelothrix_phage	2.0e-19	71.9
WP_015010140.1\|1443107_1444307_+	MspI family type II restriction endonuclease	NA	NA	NA	NA
WP_015010141.1\|1444368_1445619_-	DNA cytosine methyltransferase	Q6DMX0	Streptococcus_phage	1.5e-67	43.6
WP_015010142.1\|1445909_1447304_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	2.4e-58	32.1
WP_015010143.1\|1447646_1448387_+	glucose 1-dehydrogenase	NA	NA	NA	NA
WP_015010144.1\|1448455_1449241_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_015010145.1\|1449287_1449725_-	hypothetical protein	NA	NA	NA	NA
WP_015010146.1\|1449750_1450140_-	DUF2752 domain-containing protein	NA	NA	NA	NA
WP_015010147.1\|1450241_1450583_-	DUF4234 domain-containing protein	NA	NA	NA	NA
WP_015010148.1\|1450832_1451702_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041450135.1\|1451798_1453097_+	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA
WP_015009316.1\|1453670_1454891_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.1e-59	36.9
WP_015010150.1\|1455172_1456192_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	3.5e-27	25.2
WP_015010151.1\|1456374_1456929_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
1456281:1456295	attR	NA	NA	NA	NA
WP_015010152.1\|1457013_1457706_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_015010153.1\|1457711_1458170_-	VOC family protein	NA	NA	NA	NA
WP_015010154.1\|1458237_1459236_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_015010155.1\|1459369_1460590_-	GTPase HflX	NA	NA	NA	NA
WP_015010156.1\|1460629_1461373_-	AAA family ATPase	G3MAX6	Bacillus_virus	6.1e-45	44.5
WP_015009875.1\|1461621_1462965_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_155835481.1\|1462995_1463133_-	hypothetical protein	NA	NA	NA	NA
WP_015010157.1\|1463290_1463515_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_015010158.1\|1463547_1464504_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_155835482.1\|1464504_1466334_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.9e-69	33.4
WP_015010160.1\|1466334_1468905_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.1e-40	27.4
WP_015009875.1\|1469128_1470472_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_015010161.1\|1470684_1471233_-\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_015010162.1\|1471382_1471745_-	YlbF family regulator	NA	NA	NA	NA
WP_015010163.1\|1471859_1472780_-	membrane dipeptidase	NA	NA	NA	NA
WP_015010164.1\|1472866_1473127_-	stage V sporulation protein S	A0A1J0GVV0	Streptomyces_phage	4.2e-09	43.0
WP_015010165.1\|1473259_1474057_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_015010166.1\|1474204_1475776_-	ribonuclease Y	NA	NA	NA	NA
WP_015010167.1\|1476024_1477053_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.2e-131	68.1
WP_155835483.1\|1477210_1478455_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_015010169.1\|1478451_1479030_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_015010170.1\|1479108_1479993_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_015010171.1\|1480206_1481493_-	insulinase family protein	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	8.2e-21	34.9
WP_015010172.1\|1481485_1482772_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	3.2e-49	30.6
WP_015010173.1\|1483217_1483937_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_015010176.1\|1485424_1487674_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	1.3e-85	47.4
WP_015010177.1\|1487898_1488771_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_015010178.1\|1488798_1490013_-	aspartate kinase	NA	NA	NA	NA
WP_015010179.1\|1490028_1491072_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_015010180.1\|1491170_1491752_-	dipicolinate synthase subunit B	NA	NA	NA	NA
WP_015010181.1\|1491774_1492656_-	dipicolinate synthase subunit DpsA	NA	NA	NA	NA
WP_015010182.1\|1492848_1493088_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_015009979.1\|1493629_1494850_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.1e-59	36.9

DBSCAN-SWA_9

1682520 : 1737285

Streptococcus_phage(25.0%)

transposase,integrase

attL 1692404:1692420|attR 1730611:1730627

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015009316.1\|1682520_1683741_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.1e-59	36.9
WP_015010370.1\|1684013_1685783_-	M3 family oligoendopeptidase	NA	NA	NA	NA
WP_015010371.1\|1686503_1688228_+	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.5e-62	31.8
WP_015010372.1\|1688224_1688749_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_015010373.1\|1688816_1689851_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_015010374.1\|1689834_1691361_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	2.0e-10	25.0
WP_015010375.1\|1691373_1692453_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
1692404:1692420	attL	NA	NA	NA	NA
WP_015010376.1\|1692467_1693874_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_015010377.1\|1693888_1694479_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_015009979.1\|1695106_1696327_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.1e-59	36.9
WP_015010378.1\|1696597_1697647_-	lactonase family protein	NA	NA	NA	NA
WP_155835486.1\|1697829_1697967_-	hypothetical protein	NA	NA	NA	NA
WP_015010379.1\|1698030_1698561_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_015010380.1\|1698578_1700543_-	ABC transporter permease	NA	NA	NA	NA
WP_015010381.1\|1700517_1701417_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-24	33.3
WP_015010382.1\|1701413_1701800_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_015010383.1\|1701965_1702571_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_015010384.1\|1702626_1703919_-	hypothetical protein	NA	NA	NA	NA
WP_015010385.1\|1703915_1705016_-	DUF58 domain-containing protein	NA	NA	NA	NA
WP_015010386.1\|1705012_1705978_-	MoxR family ATPase	NA	NA	NA	NA
WP_070104674.1\|1706266_1706881_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_015010388.1\|1706944_1707757_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	5.9e-33	31.4
WP_015010389.1\|1707891_1708125_-	hypothetical protein	NA	NA	NA	NA
WP_015010390.1\|1708270_1708393_+	sporulation histidine kinase inhibitor Sda	NA	NA	NA	NA
WP_041450149.1\|1709196_1709445_+\|transposase	transposase	NA	NA	NA	NA
WP_015010392.1\|1709687_1710134_-	YwnF family protein	NA	NA	NA	NA
WP_015010393.1\|1710284_1711007_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-36	42.4
WP_015010394.1\|1710999_1711659_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_015010395.1\|1711721_1712498_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_041450321.1\|1712640_1713420_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_015010397.1\|1713568_1713787_+	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_015010398.1\|1713826_1714039_+	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_015010399.1\|1714118_1714277_+	YvrJ family protein	NA	NA	NA	NA
WP_015010400.1\|1714416_1715322_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_015010401.1\|1715375_1715822_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA
WP_015010402.1\|1715823_1717224_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_015010403.1\|1717239_1718097_-	ATP synthase F1 subunit gamma	NA	NA	NA	NA
WP_015010404.1\|1718112_1719624_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_015010405.1\|1719620_1720160_-	ATP synthase F1 subunit delta	NA	NA	NA	NA
WP_041450150.1\|1720147_1720702_-	ATP synthase F0 subunit B	NA	NA	NA	NA
WP_015010407.1\|1720747_1721023_-	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_015010408.1\|1721097_1721775_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_015010409.1\|1721811_1722183_-	ATP synthase subunit I	NA	NA	NA	NA
WP_041450323.1\|1722224_1722410_-	AtpZ/AtpI family protein	NA	NA	NA	NA
WP_015009875.1\|1722675_1724019_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_015010411.1\|1724581_1724782_+	cold-shock protein	Q9AZD3	Lactococcus_phage	5.3e-20	69.7
WP_015010412.1\|1724973_1725867_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_015010413.1\|1725956_1727306_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.8e-11	28.3
WP_041450152.1\|1727308_1727983_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.9e-35	36.2
WP_015010415.1\|1728101_1728872_-	esterase family protein	NA	NA	NA	NA
WP_015010416.1\|1728898_1729453_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	1.6e-13	27.6
WP_015010417.1\|1729524_1730187_-	hypothetical protein	NA	NA	NA	NA
WP_041450153.1\|1730284_1731196_-	AEC family transporter	NA	NA	NA	NA
1730611:1730627	attR	NA	NA	NA	NA
WP_155835537.1\|1731300_1732083_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_015010420.1\|1732142_1733006_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_015010421.1\|1733109_1733238_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_015010422.1\|1733364_1733724_+	response regulator	NA	NA	NA	NA
WP_015010423.1\|1733878_1734556_+	beta-phosphoglucomutase	A0A1D8KNV9	Synechococcus_phage	2.3e-06	22.2
WP_015010424.1\|1734608_1736912_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_070104675.1\|1736982_1737285_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2352430 : 2401529

Bacillus_phage(30.0%)