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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_018586 Listeria monocytogenes SLCC2540, complete genome 5 crisprs DinG,cas3,WYL,RT,casR,DEDDh,csa3,csn2,cas2,cas1,cas9 0 21 4 0

Results visualization

1. NC_018586
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018586_1 500627-501211 Orphan NA
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018586_2 2146021-2146308 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018586_3 2160373-2160467 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018586_4 2163269-2163700 Orphan NA
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_018586_5 2697137-2698758 TypeII II-A,II-B
24 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_018586_5 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT 2697239-2697268 30 MH341451 Listeria phage PSU-VKH-LP019, complete genome 10812-10841 0 1.0
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 NC_003216 Listeria phage A118, complete genome 8554-8583 0 1.0
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 AJ242593 Bacteriophage A118 complete genome 8554-8583 0 1.0
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 NC_003216 Listeria phage A118, complete genome 8554-8583 0 1.0
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 AJ242593 Bacteriophage A118 complete genome 8554-8583 0 1.0
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 NC_003216 Listeria phage A118, complete genome 8554-8583 0 1.0
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 AJ242593 Bacteriophage A118 complete genome 8554-8583 0 1.0
NC_018586_5 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT 2697239-2697268 30 KP399677 Listeria phage vB_LmoS_188, complete genome 10815-10844 1 0.967
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 MH341451 Listeria phage PSU-VKH-LP019, complete genome 5386-5415 1 0.967
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 KP399677 Listeria phage vB_LmoS_188, complete genome 5395-5424 1 0.967
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 DQ003642 Listeria phage A006, complete genome 5395-5424 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MN172529 Listeria phage LP-039, complete genome 130070-130099 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MT438761 Listeria virus P61, complete genome 7188-7217 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ668718 Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds 1436-1465 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 NC_025440 Listeria phage WIL-1, complete genome 38069-38098 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 NC_047872 Listeria phage LMTA-94, complete genome 2320-2349 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 DQ003638 Listeria phage A511, complete genome 129199-129228 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ591604 Listeria phage LMTA-148, complete genome 6465-6494 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ591605 Listeria phage LMTA-57, complete genome 12701-12730 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ094033 Listeria phage LP-048, complete genome 132527-132556 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 NC_042048 Listeria phage LMTA-34, complete genome 8740-8769 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MK792752 UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome 6435-6464 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 NC_024360 Listeria phage LMSP-25, complete genome 8740-8769 1 0.967
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 JQ797329 Listeria phage vB_LmoM_AG20, complete genome 129895-129924 1 0.967
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 MH341452 Listeria phage PSU-VKH-LP040, complete genome 8565-8594 1 0.967
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 DQ003637 Listeria phage A500, complete genome 8532-8561 1 0.967
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 MH341452 Listeria phage PSU-VKH-LP040, complete genome 8565-8594 1 0.967
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 DQ003637 Listeria phage A500, complete genome 8532-8561 1 0.967
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 MH341452 Listeria phage PSU-VKH-LP040, complete genome 8565-8594 1 0.967
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 DQ003637 Listeria phage A500, complete genome 8532-8561 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 MN114083 Listeria phage LP-013, complete genome 46902-46931 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 NC_021787 Listeria phage LP-037, complete genome 3564-3593 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 MN904502 Listeria phage LP-018, complete genome 46354-46383 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 JX442241 Listeria phage P70, complete genome 52814-52843 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 MN114082 Listeria phage LP-010, complete genome 46187-46216 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 KJ094026 Listeria phage LP-032 contig 3, partial genome 11457-11486 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 MH299806 Listeria phage LP-KV022, complete genome 51381-51410 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 NC_021785 Listeria phage LP-110, complete genome 9099-9128 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 MN128593 Listeria phage LP-031, complete genome 46197-46226 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 KJ094020 Listeria phage LP-026, complete genome 29716-29745 1 0.967
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 KJ094021 Listeria phage LP-114, complete genome 36907-36936 1 0.967
NC_018586_5 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT 2697239-2697268 30 DQ003642 Listeria phage A006, complete genome 10828-10857 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MT668624 Listeria phage LP-Mix_6.2, complete genome 131278-131307 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MT178766 Listeria virus P100plus, complete genome 96298-96327 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MT178767 Listeria virus P200, complete genome 96299-96328 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MN128594 Listeria phage LP-066, complete genome 131768-131797 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 NC_041862 Listeria phage LP-064, complete genome 4092-4121 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ094030 Listeria phage LP-083-2, complete genome 1159-1188 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 JX126918 Listeria phage LP-125, complete genome 4092-4121 2 0.933
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 KJ094031 Listeria phage LP-124, complete genome 99044-99073 2 0.933
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 KJ094022 Listeria phage LP-030-3, complete genome 16946-16975 2 0.933
NC_018586_5 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT 2697437-2697466 30 KP399678 Listeria phage vB_LmoS_293, complete genome 8553-8582 2 0.933
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 KJ094022 Listeria phage LP-030-3, complete genome 16946-16975 2 0.933
NC_018586_5 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT 2697503-2697532 30 KP399678 Listeria phage vB_LmoS_293, complete genome 8553-8582 2 0.933
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 KJ094022 Listeria phage LP-030-3, complete genome 16946-16975 2 0.933
NC_018586_5 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697569-2697598 30 KP399678 Listeria phage vB_LmoS_293, complete genome 8553-8582 2 0.933
NC_018586_5 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697833-2697862 30 MN128593 Listeria phage LP-031, complete genome 46544-46573 2 0.933
NC_018586_5 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697833-2697862 30 NC_021787 Listeria phage LP-037, complete genome 3911-3940 2 0.933
NC_018586_5 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697833-2697862 30 MN904502 Listeria phage LP-018, complete genome 46701-46730 2 0.933
NC_018586_5 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697833-2697862 30 MH299806 Listeria phage LP-KV022, complete genome 51728-51757 3 0.9
NC_018586_5 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697833-2697862 30 NC_021785 Listeria phage LP-110, complete genome 9446-9475 3 0.9
NC_018586_5 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697965-2697994 30 JB137888 Sequence 7 from Patent WO2012159774 1937-1966 3 0.9
NC_018586_5 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT 2697371-2697400 30 MH319749 Marine virus AG-345-F15 Ga0172271_11 genomic sequence 62853-62882 4 0.867
NC_018586_5 5.9|2697701|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697701-2697730 30 NC_024361 Streptococcus phage DCC1738, complete sequence 18891-18920 6 0.8
NC_018586_4 4.1|2163305|30|NC_018586|CRISPRCasFinder 2163305-2163334 30 MT446423 UNVERIFIED: Escherichia virus TH58, complete genome 75562-75591 7 0.767
NC_018586_4 4.1|2163305|30|NC_018586|CRISPRCasFinder 2163305-2163334 30 MT774400 CrAssphage cr4_1, complete genome 8589-8618 7 0.767
NC_018586_4 4.5|2163569|30|NC_018586|CRISPRCasFinder 2163569-2163598 30 MN693565 Marine virus AFVG_25M347, complete genome 5677-5706 7 0.767
NC_018586_5 5.9|2697701|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697701-2697730 30 NZ_CP054611 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence 9896-9925 7 0.767
NC_018586_5 5.10|2697767|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697767-2697796 30 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 1070574-1070603 7 0.767
NC_018586_5 5.20|2698428|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698428-2698457 30 NZ_CP054602 Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed3, complete sequence 40714-40743 7 0.767
NC_018586_4 4.1|2163305|30|NC_018586|CRISPRCasFinder 2163305-2163334 30 NC_031280 Acinetobacter phage vB_AbaM_phiAbaA1, complete genome 79053-79082 8 0.733
NC_018586_4 4.5|2163569|30|NC_018586|CRISPRCasFinder 2163569-2163598 30 MH319754 Marine virus AG-345-L05 Ga0172272_11 genomic sequence 115479-115508 8 0.733
NC_018586_5 5.1|2697173|30|NC_018586|CRISPRCasFinder,CRT 2697173-2697202 30 MN855765 Myoviridae sp. isolate 14, complete genome 24949-24978 8 0.733
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 NZ_CP045332 Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence 16423-16452 8 0.733
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 NZ_CP045348 Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence 6601-6630 8 0.733
NC_018586_5 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT 2697305-2697334 30 NZ_CP045337 Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence 4987-5016 8 0.733
NC_018586_5 5.10|2697767|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697767-2697796 30 KU160494 Vibrio phage vB_VmeM-32, complete genome 54954-54983 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NC_021911 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence 458306-458335 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NC_007766 Rhizobium etli CFN 42 plasmid p42f, complete sequence 502714-502743 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP020911 Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence 668386-668415 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013600 Rhizobium sp. N741 plasmid pRspN741e, complete sequence 563133-563162 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013504 Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence 563134-563163 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013510 Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence 561574-561603 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013521 Rhizobium sp. N113 plasmid pRspN113d, complete sequence 565821-565850 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013494 Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence 559940-559969 8 0.733
NC_018586_5 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2697899-2697928 30 NZ_CP013594 Rhizobium sp. N871 plasmid pRspN871d, complete sequence 563134-563163 8 0.733
NC_018586_5 5.15|2698097|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698097-2698126 30 MN693221 Marine virus AFVG_25M6, complete genome 18807-18836 8 0.733
NC_018586_5 5.19|2698362|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698362-2698391 30 NC_015253 Brochothrix phage A9, complete genome 16550-16579 8 0.733
NC_018586_5 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698561-2698590 30 AP014395 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S45-C86, *** SEQUENCING IN PROGRESS *** 10022-10051 8 0.733
NC_018586_5 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698561-2698590 30 MN694770 Marine virus AFVG_250M796, complete genome 29454-29483 8 0.733
NC_018586_5 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698561-2698590 30 MN694102 Marine virus AFVG_250M795, complete genome 29649-29678 8 0.733
NC_018586_5 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698561-2698590 30 MN694233 Marine virus AFVG_250M797, complete genome 29438-29467 8 0.733
NC_018586_5 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698627-2698656 30 AP014395 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S45-C86, *** SEQUENCING IN PROGRESS *** 10022-10051 8 0.733
NC_018586_5 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698627-2698656 30 MN694770 Marine virus AFVG_250M796, complete genome 29454-29483 8 0.733
NC_018586_5 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698627-2698656 30 MN694102 Marine virus AFVG_250M795, complete genome 29649-29678 8 0.733
NC_018586_5 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698627-2698656 30 MN694233 Marine virus AFVG_250M797, complete genome 29438-29467 8 0.733
NC_018586_3 3.1|2160402|37|NC_018586|CRISPRCasFinder 2160402-2160438 37 NZ_MG205641 Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence 92929-92965 9 0.757
NC_018586_3 3.1|2160402|37|NC_018586|CRISPRCasFinder 2160402-2160438 37 NZ_MG205642 Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence 92929-92965 9 0.757
NC_018586_5 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698561-2698590 30 MN694611 Marine virus AFVG_250M767, complete genome 43171-43200 9 0.7
NC_018586_5 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698627-2698656 30 MN694611 Marine virus AFVG_250M767, complete genome 43171-43200 9 0.7
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 NC_042023 Enterococcus phage phiSHEF5, complete genome 37919-37949 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 MG264739 UNVERIFIED: Enterococcus phage phiNASRA1, complete genome 25281-25311 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 MK721191 Enterococcus phage vB_EfaS_Ef5.4, complete genome 3231-3261 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 MK360024 Enterococcus phage vB_EfaS_Max, complete genome 3514-3544 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 MT857001 Enterococcus phage EFA1, complete genome 3459-3489 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 KT932701 Enterococcus phage vB_EfaS_IME196, complete genome 3018-3048 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 NC_042022 Enterococcus phage phiSHEF4, complete genome 37771-37801 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 JX193904 Enterococcus phage EfaCPT1, complete genome 2040-2070 10 0.677
NC_018586_5 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR 2698229-2698259 31 KJ127304 Enterococcus phage AUEF3, partial genome 35727-35757 10 0.677

1. spacer 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 0, identity: 1.0

gctaaaccaatgacagctggcaacgctcca	CRISPR spacer
gctaaaccaatgacagctggcaacgctcca	Protospacer
******************************

2. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

3. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

4. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

5. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

6. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_003216 (Listeria phage A118, complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

7. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to AJ242593 (Bacteriophage A118 complete genome) position: , mismatch: 0, identity: 1.0

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagt	Protospacer
******************************

8. spacer 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 1, identity: 0.967

gctaaaccaatgacagctggcaacgctcca	CRISPR spacer
gctagaccaatgacagctggcaacgctcca	Protospacer
****.*************************

9. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to MH341451 (Listeria phage PSU-VKH-LP019, complete genome) position: , mismatch: 1, identity: 0.967

aagactaacttctggtcgagctcattaccg	CRISPR spacer
aagactaacttctggtcgagctccttaccg	Protospacer
*********************** ******

10. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to KP399677 (Listeria phage vB_LmoS_188, complete genome) position: , mismatch: 1, identity: 0.967

aagactaacttctggtcgagctcattaccg	CRISPR spacer
aagactaacttctggtcgagctccttaccg	Protospacer
*********************** ******

11. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.967

aagactaacttctggtcgagctcattaccg	CRISPR spacer
aagactaacttctggtcgagctccttaccg	Protospacer
*********************** ******

12. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MN172529 (Listeria phage LP-039, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

13. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MT438761 (Listeria virus P61, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

14. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ668718 (Listeria phage LMTA-34 hypothetical proteins and DNA modification protein genes, complete cds) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

15. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to NC_025440 (Listeria phage WIL-1, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

16. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to NC_047872 (Listeria phage LMTA-94, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

17. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to DQ003638 (Listeria phage A511, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

18. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ591604 (Listeria phage LMTA-148, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

19. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ591605 (Listeria phage LMTA-57, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

20. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ094033 (Listeria phage LP-048, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

21. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to NC_042048 (Listeria phage LMTA-34, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

22. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MK792752 (UNVERIFIED: Listera phage vB-LmoM-SH3-3, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

23. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to NC_024360 (Listeria phage LMSP-25, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

24. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to JQ797329 (Listeria phage vB_LmoM_AG20, complete genome) position: , mismatch: 1, identity: 0.967

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcccttctttaata	Protospacer
********************.*********

25. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

26. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

27. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

28. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

29. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MH341452 (Listeria phage PSU-VKH-LP040, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

30. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to DQ003637 (Listeria phage A500, complete genome) position: , mismatch: 1, identity: 0.967

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccgactctaaacagttccgtgccaagc	Protospacer
*****************************.

31. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttctttagcg	Protospacer
*****************************.

32. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttctttagcg	Protospacer
*****************************.

33. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttctttagcg	Protospacer
*****************************.

34. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttctttagcg	Protospacer
*****************************.

35. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttctttagcg	Protospacer
*****************************.

36. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KJ094026 (Listeria phage LP-032 contig 3, partial genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

37. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

38. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

39. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

40. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

41. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 1, identity: 0.967

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtcgtgattaacgttccttccttagca	Protospacer
***********************.******

42. spacer 5.2|2697239|30|NC_018586|CRISPRCasFinder,CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 2, identity: 0.933

gctaaaccaatgacagctggcaacgctcca	CRISPR spacer
gctaaaccaattgcagctggcaacgctcca	Protospacer
*********** .*****************

43. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MT668624 (Listeria phage LP-Mix_6.2, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

44. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MT178766 (Listeria virus P100plus, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

45. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MT178767 (Listeria virus P200, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

46. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MN128594 (Listeria phage LP-066, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

47. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to NC_041862 (Listeria phage LP-064, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

48. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ094030 (Listeria phage LP-083-2, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

49. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to JX126918 (Listeria phage LP-125, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

50. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to KJ094031 (Listeria phage LP-124, complete genome) position: , mismatch: 2, identity: 0.933

gagtttttaggtgctttcccctctttaata	CRISPR spacer
gagtttttaggtgctttcctttctttaata	Protospacer
*******************..*********

51. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

52. spacer 5.5|2697437|30|NC_018586|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

53. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

54. spacer 5.6|2697503|30|NC_018586|CRISPRCasFinder,CRT matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

55. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KJ094022 (Listeria phage LP-030-3, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

56. spacer 5.7|2697569|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KP399678 (Listeria phage vB_LmoS_293, complete genome) position: , mismatch: 2, identity: 0.933

aaaccgactctaaacagttccgtgccaagt	CRISPR spacer
aaaccaactctaaacagttccgtgccaagc	Protospacer
*****.***********************.

57. spacer 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 2, identity: 0.933

aagtcaagacttgtacaaacgtgtcacaat	CRISPR spacer
acgtcaagacttgcacaaacgtgtcacaat	Protospacer
* ***********.****************

58. spacer 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 2, identity: 0.933

aagtcaagacttgtacaaacgtgtcacaat	CRISPR spacer
acgtcaagacttgcacaaacgtgtcacaat	Protospacer
* ***********.****************

59. spacer 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 2, identity: 0.933

aagtcaagacttgtacaaacgtgtcacaat	CRISPR spacer
acgtcaagacttgcacaaacgtgtcacaat	Protospacer
* ***********.****************

60. spacer 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 3, identity: 0.9

aagtcaagacttgtacaaacgtgtcacaat	CRISPR spacer
acgtcaagactttcacaaacgtgtcacaat	Protospacer
* ********** .****************

61. spacer 5.11|2697833|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 3, identity: 0.9

aagtcaagacttgtacaaacgtgtcacaat	CRISPR spacer
acgtcaagactttcacaaacgtgtcacaat	Protospacer
* ********** .****************

62. spacer 5.13|2697965|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 3, identity: 0.9

tctgtcgtgattaacgttccttctttagca	CRISPR spacer
tctgtagtgattaacgttccttcttttgcg	Protospacer
***** ******************** **.

63. spacer 5.4|2697371|30|NC_018586|CRISPRCasFinder,CRT matches to MH319749 (Marine virus AG-345-F15 Ga0172271_11 genomic sequence) position: , mismatch: 4, identity: 0.867

gagttt---ttaggtgctttcccctctttaata	CRISPR spacer
---ttttgattaggtgctttcacctctttaata	Protospacer
   ***   ************ ***********

64. spacer 5.9|2697701|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_024361 (Streptococcus phage DCC1738, complete sequence) position: , mismatch: 6, identity: 0.8

---agcgagatagtagatgctagacaagactta	CRISPR spacer
ctaagtcag---gtagatgctagacaagtctta	Protospacer
   **. **   **************** ****

65. spacer 4.1|2163305|30|NC_018586|CRISPRCasFinder matches to MT446423 (UNVERIFIED: Escherichia virus TH58, complete genome) position: , mismatch: 7, identity: 0.767

-caaggtacagtatggctagattagtaaaat	CRISPR spacer
ctataacac-gtatggctagattagtataat	Protospacer
 .* ...** ***************** ***

66. spacer 4.1|2163305|30|NC_018586|CRISPRCasFinder matches to MT774400 (CrAssphage cr4_1, complete genome) position: , mismatch: 7, identity: 0.767

caaggtacagtatggctagattagtaaaat	CRISPR spacer
aaaattatactatggctagattagtaaatg	Protospacer
 **. **.* ******************  

67. spacer 4.5|2163569|30|NC_018586|CRISPRCasFinder matches to MN693565 (Marine virus AFVG_25M347, complete genome) position: , mismatch: 7, identity: 0.767

ccatgatcaagtttcttatattgattaatc	CRISPR spacer
tgatgatacagtttcttatattgataattt	Protospacer
. *****  **************** * *.

68. spacer 5.9|2697701|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054611 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

agcgagatagtagatgctagacaagactta	CRISPR spacer
gccgagatagtagatgctcgacatgaccct	Protospacer
. **************** **** ***.. 

69. spacer 5.10|2697767|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.767

gatggatgtgtctggatcgatggatcaggc	CRISPR spacer
ggtggatgtgtccggctcgatggatatcga	Protospacer
*.**********.** *********   * 

70. spacer 5.20|2698428|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054602 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

taaacgccttgtgttctttgct--ctcgaata	CRISPR spacer
caaacgccttgcgttctttgctggttccag--	Protospacer
.**********.**********  .** *.  

71. spacer 4.1|2163305|30|NC_018586|CRISPRCasFinder matches to NC_031280 (Acinetobacter phage vB_AbaM_phiAbaA1, complete genome) position: , mismatch: 8, identity: 0.733

caaggtacagtatggctagattagtaaaat	CRISPR spacer
tcaatggcagaatggctagatgagtaaaat	Protospacer
. *.  .*** ********** ********

72. spacer 4.5|2163569|30|NC_018586|CRISPRCasFinder matches to MH319754 (Marine virus AG-345-L05 Ga0172272_11 genomic sequence) position: , mismatch: 8, identity: 0.733

ccatgatcaagtttcttatattgattaatc	CRISPR spacer
ttcagatcaagtttcttttattgatgaaga	Protospacer
..  ************* ******* **  

73. spacer 5.1|2697173|30|NC_018586|CRISPRCasFinder,CRT matches to MN855765 (Myoviridae sp. isolate 14, complete genome) position: , mismatch: 8, identity: 0.733

aaacataagttcaatctcttccccatcact	CRISPR spacer
acctttaagttcaacctctttcccatcagc	Protospacer
*  . *********.*****.******* .

74. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to NZ_CP045332 (Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence) position: , mismatch: 8, identity: 0.733

aagactaacttctggtcgagctcattaccg	CRISPR spacer
agcatggcattctggtcgagctgattaccg	Protospacer
*. *. .  ************* *******

75. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to NZ_CP045348 (Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence) position: , mismatch: 8, identity: 0.733

aagactaacttctggtcgagctcattaccg	CRISPR spacer
agcatggcattctggtcgagctgattaccg	Protospacer
*. *. .  ************* *******

76. spacer 5.3|2697305|30|NC_018586|CRISPRCasFinder,CRT matches to NZ_CP045337 (Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence) position: , mismatch: 8, identity: 0.733

aagactaacttctggtcgagctcattaccg	CRISPR spacer
agcatggcattctggtcgagctgattaccg	Protospacer
*. *. .  ************* *******

77. spacer 5.10|2697767|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KU160494 (Vibrio phage vB_VmeM-32, complete genome) position: , mismatch: 8, identity: 0.733

gatggatgtgtctggatcgatggatcaggc	CRISPR spacer
cgtggatgtttctggatcgatgtatggttc	Protospacer
 .******* ************ ** .  *

78. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_021911 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1f, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

79. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

80. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020911 (Rhizobium etli strain NXC12 plasmid pRetNXC12e, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

81. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

82. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

83. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

84. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

85. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

86. spacer 5.12|2697899|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 8, identity: 0.733

tggagtggtgcgaactatagcaagcgcatc	CRISPR spacer
tgaagtggtgcgaactatagccggtttgtt	Protospacer
**.****************** .*. ..*.

87. spacer 5.15|2698097|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN693221 (Marine virus AFVG_25M6, complete genome) position: , mismatch: 8, identity: 0.733

aatac-ctattatccaatggggtagaggtca	CRISPR spacer
-ttgcatcattatccattggggtagaggttg	Protospacer
  *.* ..******** ************..

88. spacer 5.19|2698362|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 8, identity: 0.733

gttgaccatcaatatagtaaacgtcattat	CRISPR spacer
tagccccatcaatataataaatgtcattct	Protospacer
     ***********.****.****** *

89. spacer 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to AP014395 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S45-C86, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
cttttttataaatagccatttgaagtttat	Protospacer
.  .********.************. .**

90. spacer 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694770 (Marine virus AFVG_250M796, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

91. spacer 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694102 (Marine virus AFVG_250M795, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

92. spacer 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694233 (Marine virus AFVG_250M797, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

93. spacer 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to AP014395 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S45-C86, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
cttttttataaatagccatttgaagtttat	Protospacer
.  .********.************. .**

94. spacer 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694770 (Marine virus AFVG_250M796, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

95. spacer 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694102 (Marine virus AFVG_250M795, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

96. spacer 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694233 (Marine virus AFVG_250M797, complete genome) position: , mismatch: 8, identity: 0.733

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttat	Protospacer
*********** *********.  .. .**

97. spacer 3.1|2160402|37|NC_018586|CRISPRCasFinder matches to NZ_MG205641 (Paeniclostridium sordellii strain 7508-A plasmid pCS1-7, complete sequence) position: , mismatch: 9, identity: 0.757

ctgcaagtttgttaaattaattaaacctgctaatgga	CRISPR spacer
aaataaagtggttaaattagttaaccctgctaatgga	Protospacer
  ..**. * *********.**** ************

98. spacer 3.1|2160402|37|NC_018586|CRISPRCasFinder matches to NZ_MG205642 (Paeniclostridium sordellii strain 7543-A plasmid pCS1-6, complete sequence) position: , mismatch: 9, identity: 0.757

ctgcaagtttgttaaattaattaaacctgctaatgga	CRISPR spacer
aaataaagtggttaaattagttaaccctgctaatgga	Protospacer
  ..**. * *********.**** ************

99. spacer 5.22|2698561|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694611 (Marine virus AFVG_250M767, complete genome) position: , mismatch: 9, identity: 0.7

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttct	Protospacer
*********** *********.  .. . *

100. spacer 5.23|2698627|30|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MN694611 (Marine virus AFVG_250M767, complete genome) position: , mismatch: 9, identity: 0.7

tagctttataaacagccatttgaagcacat	CRISPR spacer
tagctttataatcagccatttattatttct	Protospacer
*********** *********.  .. . *

101. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_042023 (Enterococcus phage phiSHEF5, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

102. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MG264739 (UNVERIFIED: Enterococcus phage phiNASRA1, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

103. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MK721191 (Enterococcus phage vB_EfaS_Ef5.4, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

104. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

105. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to MT857001 (Enterococcus phage EFA1, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

106. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KT932701 (Enterococcus phage vB_EfaS_IME196, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

107. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to NC_042022 (Enterococcus phage phiSHEF4, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

108. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to JX193904 (Enterococcus phage EfaCPT1, complete genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

109. spacer 5.17|2698229|31|NC_018586|CRISPRCasFinder,CRT,PILER-CR matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 10, identity: 0.677

tattatcgaaactagtgaaatttatcgcgtg	CRISPR spacer
ctttatcgaaagtagtgatatttattcaaca	Protospacer
. ********* ****** ******.  ...

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 125108 : 131635 10 Listeria_phage(33.33%) tail NA
DBSCAN-SWA_2 1109386 : 1116808 8 Hokovirus(33.33%) NA NA
DBSCAN-SWA_3 1205366 : 1304833 114 Listeria_phage(81.82%) terminase,holin,integrase,tRNA,protease,tail,capsid,portal attL 1231117:1231137|attR 1275127:1275147
DBSCAN-SWA_4 2564795 : 2572637 7 Streptococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage