CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP007807	Brevibacillus laterosporus LMG 15441 plasmid pBRLA33, complete sequence	0 crisprs	NA	0	0
NZ_CP007808	Brevibacillus laterosporus LMG 15441 plasmid pBRLA07, complete sequence	0 crisprs	NA	0	0
NZ_CP007806	Brevibacillus laterosporus LMG 15441 chromosome, complete genome	2 crisprs	csa3,cas14j,cas3,RT,DinG,WYL,DEDDh	1	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007806_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007806_1

1243919-1244042

Orphan

Consensus_repeat	Method
TAGGATTGTTACTGGTTAAGCAGGCAAAACCTAAATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007806_1

>merge|NZ_CP007806|1|1243919-1244042|CRISPRCasFinder
TAGGATTGTTACTGGTTAAGCAGGCAAAACCTAAATGGTTGTCTATTTATATGGACAGCGATTTAGGTTTTTTTTAATTTCATACTACTAGGATTGTTACTGGTAAGCAGGCAAAACCTAAATG

>NZ_CP007806|1|1|1243919-1244042|CRISPRCasFinder
TAGGATTGTTACTGGTTAAGCAGGCAAAACCTAAATG	GTTGTCTATTTATATGGACAGCGATTTAGGTTTTTTTTAATTTCATACTA
CTAGGATTGTTACTGGTAAGCAGGCAAAACCTAAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007806.1\|WP_003334937.1\|1234421_1238246_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173801
NZ_CP007806.1\|WP_003334938.1\|1233473_1234223_+\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|181515
NZ_CP007806.1\|WP_003334922.1\|1252160_1253963_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_CP007806.1\|WP_003334940.1\|1231707_1233471_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236319
NZ_CP007806.1\|WP_003334933.1\|1239733_1241050_+\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NZ_CP007806.1\|WP_003334921.1\|1253976_1255029_+\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|239507
NZ_CP007806.1\|WP_003334932.1\|1241087_1242851_+\|FTR1-family-protein	unknown	unknown	gnl\|CDD\|272930
NZ_CP007806.1\|WP_003334941.1\|1231077_1231689_+\|succinate-dehydrogenase-cytochrome-b558-subunit	unknown	unknown	gnl\|CDD\|239577
NZ_CP007806.1\|WP_003334927.1\|1248820_1249387_+\|energy-coupled-thiamine-transporter-ThiT	unknown	unknown	gnl\|CDD\|370542
NZ_CP007806.1\|WP_003334924.1\|1250397_1250904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003334936.1\|1238327_1238702_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003334925.1\|1249647_1250220_+\|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225080
NZ_CP007806.1\|WP_022584144.1\|1230080_1230560_-\|DUF2507-domain-containing-protein	unknown	unknown	gnl\|CDD\|378477
NZ_CP007806.1\|WP_003334923.1\|1251023_1251587_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_CP007806.1\|WP_003334929.1\|1246160_1247576_+\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|182112
NZ_CP007806.1\|WP_003334935.1\|1238851_1239727_+\|EfeM/EfeO-family-lipoprotein	unknown	unknown	gnl\|CDD\|271139
NZ_CP007806.1\|WP_041751974.1\|1244190_1246077_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|273919
NZ_CP007806.1\|WP_003334928.1\|1247887_1248109_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP007806.1\|WP_003334931.1\|1243011_1243845_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP007806.1\|WP_003334920.1\|1255025_1255796_+\|precorrin-6A-reductase	unknown	unknown	gnl\|CDD\|376826

Protein	Function_ID	Function_description	E-value
NZ_CP007806.1\|WP_003334937.1\|1234421_1238246_+\|S8-family-serine-peptidase	gnl\|CDD\|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	4.39862e-59
NZ_CP007806.1\|WP_003334938.1\|1233473_1234223_+\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|181515	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	0
NZ_CP007806.1\|WP_003334922.1\|1252160_1253963_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	3.9875e-141
NZ_CP007806.1\|WP_003334940.1\|1231707_1233471_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236319	PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP007806.1\|WP_003334933.1\|1239733_1241050_+\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	2.01693e-166
NZ_CP007806.1\|WP_003334921.1\|1253976_1255029_+\|sirohydrochlorin-chelatase	gnl\|CDD\|239507	cd03414, CbiX_SirB_C, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.	3.53895e-45
NZ_CP007806.1\|WP_003334932.1\|1241087_1242851_+\|FTR1-family-protein	gnl\|CDD\|272930	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. [Unknown function, General].	9.78983e-43
NZ_CP007806.1\|WP_003334941.1\|1231077_1231689_+\|succinate-dehydrogenase-cytochrome-b558-subunit	gnl\|CDD\|239577	cd03497, SQR_TypeB_1_TM, Succinate:quinone oxidoreductase (SQR) Type B subfamily 1, transmembrane subunit; composed of proteins similar to Bacillus subtilis SQR. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Bacillus subtilis SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside on the transmembrane subunit. The transmembrane subunit of Bacillus subtilis SQR is also called Sdh cytochrome b558 subunit. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	5.43285e-82
NZ_CP007806.1\|WP_003334927.1\|1248820_1249387_+\|energy-coupled-thiamine-transporter-ThiT	gnl\|CDD\|370542	pfam09515, Thia_YuaJ, Thiamine transporter protein (Thia_YuaJ). Members of this protein family have been assigned as thiamine transporters by a phylogenetic analysis of families of genes regulated by the THI element, a broadly conserved RNA secondary structure element through which thiamine pyrophosphate (TPP) levels can regulate transcription of many genes related to thiamine transport, salvage, and de novo biosynthesis. Species with this protein always lack the ThiBPQ ABC transporter. In some species (e.g. Streptococcus mutans and Streptococcus pyogenes), yuaJ is the only THI-regulated gene. Evidence from Bacillus cereus indicates thiamine uptake is coupled to proton translocation.	1.6597e-48
NZ_CP007806.1\|WP_003334925.1\|1249647_1250220_+\|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein	gnl\|CDD\|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	1.49975e-50
NZ_CP007806.1\|WP_022584144.1\|1230080_1230560_-\|DUF2507-domain-containing-protein	gnl\|CDD\|378477	pfam10702, DUF2507, Protein of unknown function (DUF2507). This family is conserved in Firmicutes. The function is not known.	8.85232e-23
NZ_CP007806.1\|WP_003334923.1\|1251023_1251587_-\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	1.47016e-44
NZ_CP007806.1\|WP_003334929.1\|1246160_1247576_+\|6-phospho-beta-glucosidase	gnl\|CDD\|182112	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional.	0
NZ_CP007806.1\|WP_003334935.1\|1238851_1239727_+\|EfeM/EfeO-family-lipoprotein	gnl\|CDD\|271139	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon. This family includes the EfeO domain, an essential component of the EfeUOB operon which is highly conserved in bacteria. However, its biochemical function is unknown. EfeO contains an N-terminal cupredoxin (CUP)-like domain and C-terminal imelysin-like domain that may bind iron. Algp7, a member of EfeO family protein from Sphingomonas sp. A1, is found to bind alginate at neutral pH, but does not contain the CUP domain, thus having a role that does not seem to be related to iron uptake. Some members of this family are fused to an N-terminal putative EfeU ion permease domain. The imelysin-like domain of this family also contains the GxHxxE sequence motif and a highly conserved functional site, suggesting a similar role to other imelysin family proteins containing the same motif.	8.20417e-101
NZ_CP007806.1\|WP_041751974.1\|1244190_1246077_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP007806.1\|WP_003334928.1\|1247887_1248109_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.40328e-22
NZ_CP007806.1\|WP_003334931.1\|1243011_1243845_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	3.14172e-77
NZ_CP007806.1\|WP_003334920.1\|1255025_1255796_+\|precorrin-6A-reductase	gnl\|CDD\|376826	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyzes the reaction: precorrin-6Y + NADP(+) <=> precorrin-6X + NADPH. CbiJ and CobK both catalyze the reduction of macocycle in the colbalmin biosynthesis pathway.	3.54546e-103

>NZ_CP007806.1|WP_003334931.1|1243011_1243845_+|PRD-domain-containing-protein
MKIAKVINNNVISVYNDQNKELVIMGRGIAFQKRPGDKVEEDKIEKIFKLENKDISEKFKTLLYEIPMEYMEISENIINYAKMSLGKKLNESIYVSLTDHIYFAIQRNKDGLDIKNALLWEIKRLYQDEFSVGQKAIKQINQKLGITLPEDEAGFIALHIVNAELNEEMPTIVTITKVMQEILNIVKYHFNIEVDEESLHYYRFITHLKFFAQRLCKETHMESSDDFLYEMVKSKYKEAYECTKKIKRYIQKEYNHELTNEEVLYLTIHIHRVVNKK
>NZ_CP007806.1|WP_003334932.1|1241087_1242851_+|FTR1-family-protein
MWFLKSKQRMLAMFMMATFLMAVSMPAWATEATDRLFVTMSDAFLKTKEQDWPHVEATITTFAGEWTKERTDIPQAKEVDSAIAHVQAELQKETKDDKAIYAGLQQLSKALRTYEETIAPPKKEENQQKLKDVLAQLEKWQKDVKQQSHPEMLKAYQALDRNWTRAELIVRNKSIMAYGDIEKQMAFVRIALNAEPLDMKKVAEKMDGLHQSIQAFLDGKTSGDAPAEGTYSVQSLLDLLSTTISAIGANDNATAIDTLNQFLTIWPLVEGEIMTRAPSLYAKVENEIPLAISELSSKVPKTSQATDRLTQLQIDLAPYVSSGSYHMWDAAVILLREGFEALIIVAALLSFLKKTNHAHQQKWIWAGVIVGIICSGLLAVGIQLFFSQATAGASREYLEGVFGIAAVIMMVLVGNWLHNKSNIQNWNVYLKGQVESAVAKGGLWAMATVSFLAIFREGAETVIFYIGLAPSITMKELLAGIALALAILLVVGFVLIRYSVKLPIRLFFTTATVVIYALAFKIVGVSVHALQITKSLPVHPISQLPLWEGIGFFPTMETMLSQAVLLIVVLGVFAWTHKRAKNPVIPA
>NZ_CP007806.1|WP_003334933.1|1239733_1241050_+|deferrochelatase/peroxidase-EfeB
MKEEREKKHHEQQQNTTSDQNETKVSRRDMLKMVGVGGLGLLVGASGMGGVIAAANHLQGKSDKTKDKSGRMKADTVPFYGEYQAGITTETQNFVYVAAFDLTTTKRSDVIALFKDWTKATENMTQGQPVEDTKTSQYLPPVDTGEAEGLSASQLTITFGVSAQFFVKDGIDRFGIKAKRPQALIELPHFAQDALQPEWTGGDIVVQVCADDQQVAFHALRNLIRRARGIATMRWNQAGFQRTKQADLKGETVRNLFGFKDGTGNPNVKDPAQLNQHVWVQSSDGPDWMAGGSYMVYRRIQMRLEVWDRTNLSDQELTFGRHRDSGAPLGGTDEFEPLQPKKLPDVSHARIAHGDGSIKILRRSYSYADGMDRKTGTLNAGLLFICYQRDPIKQFIPMQHRLAKNDKLNEYIVHRGSGLFACFPGVKKGSYIGEGLFQ
>NZ_CP007806.1|WP_003334935.1|1238851_1239727_+|EfeM/EfeO-family-lipoprotein
MKKSIFTLSTIFVVSASLLGCTQQSQPTQADNKVAQTDAAQKVEEKKDAKDTLKGVTEAYRTYSIDQIDQFVVSTEKFVTAVKTGDMETAKKLYAPSRMYYERIEPIAESLGDLDPKIDARDGDVPKEEWGGFHKIEQGLWANKTTKGSEKVADQLLNDAKLLRAKVETVEVTPELLVTGAVDLLNEVSSSKVTGEEERYSHTDLYDFAANVEGAQKIYELLQPALVAKDQKLSDEIKKRFDDVFGLLAPFKKGEDYASYTELKPDQVKKLSQAIDALAEPLSKIGVVLEG
>NZ_CP007806.1|WP_003334936.1|1238327_1238702_+|hypothetical-protein
MFYHGIHDKYVIEHYPILSPRRTAPYKHGKDLADRMHLIEQFGLEPIHLLEESREYSQDICLRECCRFGNMVFSFQSLPTPAWQLSKHEIGVPILDLRKTVAIYATQEHESIKNLFPSIPYIIM
>NZ_CP007806.1|WP_003334937.1|1234421_1238246_+|S8-family-serine-peptidase
MKKQMIKVLCTGAVVPLLYYPVNYVGADTVLHNHQTIDNTQQIISREQIQKDIWEATSASFPKKAGGHSPGNLFNMLQNQANEWNALKHVMKGESVAKAGKSTLSMIEADRAWQELGVKGEGMLISIVDTGINHKHPDFPAPHDKQAAQKKSGASQKVITGYNWADRNQITQDVGESQHGVHVAGIVAGNGKVKGVAPEAQLLSEKVFSNYQGSISGLSESILFAMTDSIAKKADVINLSLGSSAGYVDETNTEQYAVKNAVDSGVIVVAAAGNDAYFGSDKVKQANPDHAMIGSPGLAPDAFSIASVNATTFAGNSFALEGVDQLPRVVYLTGIPISGSPLQPEQYLSQSHEMAYVGKGKKEDYNVSVKNKVVLIERGDITFDEKLRLAKEAGAAGALIYNNQAGPFLMSGNESKNIPSASILKSMGEAMAEKLKKGKKVKITFDGQFAQNELPYPEGGTMSSFSSWGPTPDLQFKPEISAPGGGILSTVSQDGYGVKSGTSMATPHVAGAMALLKQYYQKQGYSLEGRELVETLKAVAMNTAQPVLDPRTSKSKNEKLPPLPYSPRVQGAGIMQVVKAAKSPVVITNKEGKAGVSLGQIGEKRTFSLIISNKFGKEPLTYTLSDEFGVLTDQIENGYFSMRETRLPGAKVQFQTPSVTVAPGQKQEVQVTVTVPKTAPKQRFVEGYLLFTPKQAHVPALRVPYYGFYGEWNEPRIMDAPMWSAESQEKLTSVKTTWYHDKESDKWRFREALGVNGVDENGHVLINPDHIAFSPNGDGHYDKAAPSITFLRNARELSINVTDSTGQVVRSLVKDGKVNKFDQSRKGDSFFFTEKEEWAWDGMIYSSDKGAYVPAPDGSYRFVIRAKNDGSNAKWQTLTLPVRVDRQAPQITAQLNKNKLQWQTKDKDIQGYLLYVDGKKTGGPYAPTITQAVVSQPHKKMTLVAYDYAGNISYTHINGQSDFTPPGIEFPDQIFQQIMVSNQNHVAIRGKVTGEDMMDRVKLTIKEQPVKVEPDGRFQTVLDLPEGIQYVPYQVTDAFGNTREFTQRIIVDKTPPILQFVNDGNEDIVFDATSKKIVVPLRWMYRDMNYKGRLKVNGEIIASWEEDQIEKPVHKYFSHQIALKHGENKVLVEAMDEAKNLTTQSVICYADATTGSAVVMQDQKRIMYKALPAKPLSVGFAKPSYDDTAGSTLHVRGRVIKQADTELSFYYGDQRLYGDVSDQGDFLLEIPRVKEGRETITVVAQDLLGRETKAQAIVTGSKIQSKRLKPNRQE
>NZ_CP007806.1|WP_003334938.1|1233473_1234223_+|succinate-dehydrogenase-iron-sulfur-subunit
MADRLIHLIVTRQDTPDSTPYKEEFKIPYRPNMNVISALMEIQRNPVNSQGQKTKPVIWESNCLEEVCGACSMVINGKPRQACSALIDKLEQPVRIEPMKTFSVQRDLTVDRSRMFDALKRVKAWIPIDGTHDLGPGPRMAEVDRQWAYELSKCMTCGVCLEACPNVNDKSPFIGAFAISQVRLFNEHPTGKMNKHERLDSLMEEGGISYCGNSQNCVQSCPKGIPLTTSIAHMNKETTKHAIKSFFFS
>NZ_CP007806.1|WP_003334940.1|1231707_1233471_+|succinate-dehydrogenase-flavoprotein-subunit
MAKGKLIIVGGGLAGLMATIKAAEKGVAVELFSLVPVKRSHSVCAQGGINGAVNTKGEGDSTWEHFDDTIYGGDFLANQPPVKAMCDAAPGIIYMLDRMGVMFNRTPEGLLDFRRFGGTKHHRTAFAGATTGQQLLYALDEQVRRYETEGLVKKYEYWDFLGAVLDDAGVCRGITAQSMRSGEIKAFHADAVIMATGGPGIIFGKSTNSIINTGTAASALYQQGVIYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFHVCVDMKLGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGEDPRKVPMRIFPAVHYSMGGMWVDYNQMTNIPGLFAAGECDYSQHGGNRLGANSLLSAIYGGMVAGPNAINYINSLDKLSDDLPSSLFDSYSKQEQEKYDNILKMDGTENAYVIHKELGEWMTDNVTVVRYNDRLQKTDDKILELMERYKNINIQDTQQWSNSGAQFTRHLWNMLVLARAVTISALQRDESRGAHYKPEFPERDDERFMKTTMAKYNPETTAPEIYYEDIDVSLIKPRKRDYTSDKKGGK
>NZ_CP007806.1|WP_003334941.1|1231077_1231689_+|succinate-dehydrogenase-cytochrome-b558-subunit
MASKKNFALHKLHTLLGLFPIGLFLLFHLTANFQATKGPEAFNEAVGLIEKAPFLLFLEFAFIYLPLLFHAIYGLYLAFQAKPNNGNYSFFRNQMYLWQRITGVFTLIFIAWHVWQTRIVKALGTAEINYDLMHDIFTNPVMIAFYAVGVLSAVFHLCNGVWSFLVHWGITVGPRSQRMATYFTMILFVALSYVGLRAVFAFV
>NZ_CP007806.1|WP_022584144.1|1230080_1230560_-|DUF2507-domain-containing-protein
MRQATDILQQLLPEFSVYDCQRMQQMNMPFAGHLFFRNVVTQELLGDCEAPILYWMGKEIGETYHIHAAEDLILAFIQLGLGKLELTLCTARQIEYLLTHPHLTMQTTNRLERTLQFETGFIAGSIGKWLERESNATLTLLGKDKKKEPTAHIQVVISG
>NZ_CP007806.1|WP_041751974.1|1244190_1246077_+|PTS-glucose-transporter-subunit-IIA
MDKEKVAKEIVALVGGKENIAHVTHCMTRLRFNLHDDQLADKESLEKTKGVMGTMKSGGQFQVIIGNDVAQVYKEIMKSSDIAASIQGKEKGIQKKQNPISAIFDVIAGVFTPILPAIAGAGMIKGLLSLAATFGWMSPDDSTYQILNAIGDGAFYFLPLILAFSAANKFGNNPFIAVSVAAAVLHPQLTALLGTGQSTSFMGIPVTAVTYASSVIPIVITIWLASYVEKFVDNLIHKSMKLILVPMLTLLIVVPLMLIAIGPIGTIIGNGLASGIIALFDHAGLFAGVLLGGTMSLIIITGMHYALIPIMIGSVAQLGYDYILPIMFVANLAQAGAAFGVFLKSRNKEFKSIAMSTSITATMGITEPAMYGVNMRLKKPFIAALIGGAVSGAFISLFKTKAYIVGGNAGLPGLPILVGETFWYAIIGLIIAFIVGAVMTYILGFIDIPTNEDQEESKETAEFIGLEKEGTTENTLVQNEQICSPIAGVVHPLQAVSDPTFSREIMGKGLAIEPAEGRVVSPVNGTVVSIFNTKHAIGLISDAGAEVLIHIGIDTVKLGGKHFTAHVETGQQVKVGELLIEFDLQEIRQAGFETITPVIITNTDQYPEIKPSSLAEVKEKELLLNLRV
>NZ_CP007806.1|WP_003334929.1|1246160_1247576_+|6-phospho-beta-glucosidase
MTQIVKKFPEGFLWGGAVAANQLEGAYQEGGKGLSTADVSPRGIMYPHNESMEGYYPYHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPNGDELEPNEEGLNFYDQLLDEIKKYGIEPVVTISHYEMPLYLVKQYGGWRNRKLVEFYERFAKTLFKRYKDKVKYWMTFNEINVVLHAPFTGGGLVLTEGENEKNAMYQAAHHQFVASALAVKACHEIIPDAQIGCMLAYLPTYPLTSHPEDVWKAFTTDRETLFFTDIQVRGYYPSYTKRYFAENDIQIVIEEGDEELLRTYKVDYLGFSYYVSRTATVTPEKAGETNGNLIMGGVKNPYLKATDWGWEIDPKGLRIALNILYDRYQVPLFIVENGLGAVDVVEDGDVIVDDYRIAYLKDHIAEMKEAIADGVDLIGYTTWGPIDLVSASTAEMKKRYGFIYVDKDNEGKGTLRRLKKKSFYWYKNVIASNGEVLD
>NZ_CP007806.1|WP_003334928.1|1247887_1248109_-|response-regulator-transcription-factor
MKSSDQSKPLLTNREREVFELLVQDKTTKEIAGQLFISEKTVRNHISNVMQKLGVKGRSQAVVELVRLGELKI
>NZ_CP007806.1|WP_003334927.1|1248820_1249387_+|energy-coupled-thiamine-transporter-ThiT
MSRTRLVIMMEIAIMAAIAVILSKVKLFAMPQGGSVSLVMVPIALLAFRRGWVAGVITGGLVGMVKFFFGGEMVHPIQMVLDYPLSYAVLGFGAFLYASKTQSKATKIASIWGGLLVGIALCLAIRTTSGAVWFGSYAPEGTPATLYSFSYNATYLIPEYVITALVVTLLANGAPQLFQQNAGAYRRA
>NZ_CP007806.1|WP_003334925.1|1249647_1250220_+|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein
MKEEFWKAIVECDPNYDQLFFYGLSTTGIFCKPSCKSRTPKREHVKIYYAASDAIAAGFRPCKRCRPSEPTWKSAEEDAATRLLEMIHDCYNQPVTLREMASRLYVSPFYLQRCFSRCMKITPGKYLTRIRIDEAKKQLLETDRNVSMIASRVGFRNSAYFAAVFQKETGCTPTQYRLQQKKQGKTGTTR
>NZ_CP007806.1|WP_003334924.1|1250397_1250904_-|hypothetical-protein
MTFAILVGLCATAGLFLFRRAVTSGDRQQGGFWINGLAIAIATLLVLFSSAIVVFLLVTILWTVGTLFPMFVDKSDFWTLVSFAVVSFFMLMLYELILEPVLLYIMQRLHISRNWKLIPEILATTFIFYLVNTTWIPGVLLTPLTPLFVGILAVTVDYFLERIMGERR
>NZ_CP007806.1|WP_003334923.1|1251023_1251587_-|nitroreductase
MSLLQTLLQRQAIRAYDGRPIEKEKIEQLLEAAILAPNDRLREPWHFYVIQGAAKERFNQLAQDFLLERFPTKPHLVEESMKNVLATPLIIVATSQIIEGDEASSLDNDYAVSCAIHSMWLMASELGLGFVWRTRGVGLARDERLKAFLSLSDQEKVIGSLFIGYPTDEATPRTVRKPITQKTTWVE
>NZ_CP007806.1|WP_003334922.1|1252160_1253963_+|precorrin-3B-C(17)-methyltransferase
MEKGKILLIGFGPGHHDHITHRAKEAILECEVIIGYNTYVDLIRELISDKSVVRTGMTEEVSRAQEAVRLAELGQVVGVISSGDAGVYGMAGLVYEVLVEKGWTESTGVKVEVVPGISSIQSCASLLGAPIMHDACTISLSDHLTPWETIAKRVEAAASADFVIALYNPRSGRRTRQIVETQQILLKYRSPETPVGIVKSAYRDREHVVITTLADMLQHDIGMLTTVIIGNSTTFVYDQKIITPRGYQRKYTLNRMDQPLKPHERLQEKAEPWALHSQPQGGNPVSESSSVQEVAVATSPQATIQEAQVSDSAPSAAMEALSNPRQFSREVEQNSFQEETESFQAPKQAIKAFQLAMEALACVDEKTALELNQGITPPPRPFSGVVDILELGVSPGVARKNFTSEQMRLLADLTKDGGEMMYSIEHQIILRLPQVDPEQVTQQLRAVGFQLFPIGASAQVKACDFCDLEKDESIPVAEELGRRLDGLAVPKDLKIGFNGCGMACYGAVMEDIGLVYRRGAYDVFLGGKRIGRNAHPGQRIAEGVPEEQIIGLVERIVDEYKTKGHIEERFHKFFKRTGQVLEYRYQEFVAPLQIEEPCGD
>NZ_CP007806.1|WP_003334921.1|1253976_1255029_+|sirohydrochlorin-chelatase
MNGILFIGHGSRDAEGNEHLLQFTQRVTELLQEQTDVTLYETCFLELTRPTIMQGVQKIVERGATTVAMVPLMLFQAAHAKLHIPHEIDEAKAKYPHVDFRYGRPIGVHEDMVQILRDRLQNTTAYTPLEPANKDSAILLVGRGSSDSDANSDLCKIARLLWESTGVGNVEVAYMGVTYPTVEEGLVRCVRQGAKQIYVLPYLLFTGILLKRLEENLQQFHQDFPDIHASMSEALGFHELLEQIVVDRSIEALQGRALANCDLCQFRKLAVFDHHHHHDHDHDHDHDHDHDHHHGHHHDHDHDHDHDHHHDHDHHHANGHSHTPVTQEGQTACSKESQATEADDKRGVRV
>NZ_CP007806.1|WP_003334920.1|1255025_1255796_+|precorrin-6A-reductase
MILFLAGTSDARELAVLLKSTGVDLLATVVTDSAAKSLEDEGITTRVGRLPLADMIALAKEQKATTIVDASHPFAEEASKNAMACAEELQLPYIRYERETRNYVDHPNVLIVENYEQAALEAKQRKGVVMLTTGSKTLGTFTKHLLGDPEIRLIARMLPRKDNMEKCEELGVEQKNIIAMQGPFSKELNAALYTQYGVTTMITKESGKVGAVDEKLAAALELGIYTIMIDRPKLVYGETHHTFDSVLKALRTQATV

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Crispr_ID: NZ_CP007806_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007806_2

3375361-3375476

Orphan

Consensus_repeat	Method
TCATTGAAATCTACCCTTGTTCCTGTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007806_2

>merge|NZ_CP007806|2|3375361-3375476|CRISPRCasFinder
TCATTGAAATCTACCCTTGTTCCTGTTTCAGAAATAGAGCTTCCTTCGAAAACCACTATCTCTGAATCACCCAACACGCTAGAACAATCATTGAAATCTATCCTTGTTCCTGTTTC

>NZ_CP007806|2|2|3375361-3375476|CRISPRCasFinder
TCATTGAAATCTACCCTTGTTCCTGTTTC	AGAAATAGAGCTTCCTTCGAAAACCACTATCTCTGAATCACCCAACACGCTAGAACAA
TCATTGAAATCTATCCTTGTTCCTGTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007806.1\|WP_003335821.1\|3363594_3364803_+\|DUF418-domain-containing-protein	unknown	unknown	gnl\|CDD\|225193
NZ_CP007806.1\|WP_003335803.1\|3380792_3381419_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335797.1\|3384215_3384833_-\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP007806.1\|WP_003335818.1\|3367125_3368583_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP007806.1\|WP_003335812.1\|3372085_3373198_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP007806.1\|WP_003335800.1\|3382433_3383642_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NZ_CP007806.1\|WP_003335801.1\|3381934_3382219_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335820.1\|3365971_3367129_-\|WD40-repeat-domain-containing-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335811.1\|3373407_3374046_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335795.1\|3385160_3385310_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335794.1\|3385311_3386301_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP007806.1\|WP_003335813.1\|3371062_3372067_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP007806.1\|WP_003335814.1\|3370238_3371066_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP007806.1\|WP_003335817.1\|3368585_3369284_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP007806.1\|WP_003335792.1\|3386761_3387208_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007806.1\|WP_041752241.1\|3387416_3388073_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213224
NZ_CP007806.1\|WP_041752239.1\|3378987_3380109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335810.1\|3374045_3374651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007806.1\|WP_003335806.1\|3377635_3378628_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP007806.1\|WP_003335816.1\|3369410_3369581_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007806.1\|WP_003335821.1\|3363594_3364803_+\|DUF418-domain-containing-protein	gnl\|CDD\|225193	COG2311, COG2311, Predicted membrane protein [Function unknown].	6.04179e-06
NZ_CP007806.1\|WP_003335818.1\|3367125_3368583_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.16151e-48
NZ_CP007806.1\|WP_003335812.1\|3372085_3373198_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	7.16048e-48
NZ_CP007806.1\|WP_003335800.1\|3382433_3383642_-\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.50363e-76
NZ_CP007806.1\|WP_003335797.1\|3384215_3384833_-\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	2.5281e-105
NZ_CP007806.1\|WP_003335794.1\|3385311_3386301_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	9.85986e-18
NZ_CP007806.1\|WP_003335813.1\|3371062_3372067_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	5.86306e-77
NZ_CP007806.1\|WP_003335814.1\|3370238_3371066_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.05597e-86
NZ_CP007806.1\|WP_003335817.1\|3368585_3369284_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.81118e-81
NZ_CP007806.1\|WP_003335792.1\|3386761_3387208_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.18461e-14
NZ_CP007806.1\|WP_041752241.1\|3387416_3388073_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213224	cd03257, ABC_NikE_OppD_transporters, ATP-binding cassette domain of nickel/oligopeptides specific transporters. The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.	8.03382e-56
NZ_CP007806.1\|WP_003335806.1\|3377635_3378628_+\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	3.57059e-23

>NZ_CP007806.1|WP_003335810.1|3374045_3374651_+|hypothetical-protein
MRKIAVIYSGNAPHHRTFNEPKYRQYIKELIYFPEFFDTPLDSFDVLIVPSQLNQKLLLESKEKIHAFAQRGGIVVSFGPQPWEWLPNQKWEDRETNFWWWIEKGAQSGLVLSAPEYDLFNYITLADATWHQHGVFWPIEGTKKLITTEDGGAVMYVDKISTNGTWIMTTLDPDYHFGSYFMPATERFFDGFFPWLADGEI
>NZ_CP007806.1|WP_003335811.1|3373407_3374046_+|hypothetical-protein
MAQFKEFLWLDPGHAFGLENRTSPFIVENFTQIDQYDFAEINVRPFKCIVIHDFIDQEYMFKHKEKISSFLEEGKIVIFSGHLCKEWLPGCPIFTPKKINTYKDYEISIATSNPIFEGVTPNDMTYNKGVAGFFARGTHSPVPAKAEVLLTLSGDLPVTYIDRHTTKGTILAHAGRDIFAHRMQNKSTDRISTQLLQWIHDEYETIQNSGGK
>NZ_CP007806.1|WP_003335812.1|3372085_3373198_-|ABC-transporter-substrate-binding-protein
MKCKFVLSATTLLLFLAGCGNTEEISTSKELMPTQETKLIVDELNRKVEIPTKIDRVVMGSILPYFSTWYIATNSTDEIVGIHPNSYNAAAHSILKDISPSILKAKTNFIKNGEVNIEELLALNPQVYFEIANQQKTVKKLEEAGITTVALDTKTTSLNPLDTLNRWLSLTGEITGTINRQKEIINEGEANQKMISEVLSGVKEDKPRVMILQYHSNGEISTAGIGMHGNRWLNATGGIDVAAEKIKGIKAINMEQVYEWNPDIIYITNFTETQPEDLYNNVFDGQDWSQVKAVKNKKVYKMPLGIYRWYPPSGDAPLMLKWMAQKNYPELFTYDMNKEIKDYYKRFYDYELTDKQVQEILNPPSEAAKY
>NZ_CP007806.1|WP_003335813.1|3371062_3372067_-|iron-ABC-transporter-permease
MKSRFIKSLLWTLPLIFGLISIGIGRYHVDFIVQTKILLSQIVPIEKTWTNMDETVVMNIRLPRILLAMLIGGGLSIAGAAFQGMFANPLVSPDILGVSAGAGFGASIGILLFGNGFTMQIFSLLMGMLAIGFAFLIGGSKRDMPIFMLVLAGVVTSALFQALISLVKFLADPEEKLPSITYWLMGSLGTASYSDLFIGGPLILIGIIILYILRWRLNILSLSEDEAKSLGISVAKMKWLVILGATLITSSAVAIAGIIGWVGLIIPHIARMLVGSNNQYVLPASISIGAMYLLMIDNLARSLTSAEIPLSILTAIVGAPFFAYLLRKTGGGWS
>NZ_CP007806.1|WP_003335814.1|3370238_3371066_-|ABC-transporter-ATP-binding-protein
MILQIKDGNYFYKKSNHGNEQKYLYHNDINFELQPGEIMSILGPNGAGKTTMLKCIMGLLRWKKGETLLGGKPLSSYSQKEVWKTIGYVPQASKMTFGYSILDLVIMGRALLLHTYAQPSEVDRKAALDALDMVGIQHLAEQPCTAVSGGELQLALIARTLVSEPNILVLDEPESHLDIHKQKIILQTIKKLVKERGLACVINTHYANHAFYFGDKVLMVAKDQPIITGPVSELMTEENLLHYFQIEVTKLLHKVDGHVYETIIPKYFGVDYDSN
>NZ_CP007806.1|WP_003335816.1|3369410_3369581_-|hypothetical-protein
MAKLEQVVEEAVVKKQAGVIAQAHIAYDKLMTEIHENSQKARVLGANISYFPGYQS
>NZ_CP007806.1|WP_003335817.1|3368585_3369284_-|response-regulator-transcription-factor
MNKTKVLIIEDEQPIADLLSYGLTLEGFRTRTSASGATGMMEMEQFNPDLLLLDWMLPDQSGLDICKRVTENYNIPILMITAKSDITDKVLGLEFGADDYITKPFDLREVIARIRTILRRVDQANIRERDTGENDVIRFKNIEIVVEERLVKKEGILVDLTPKEFDLLMTLFGHRGRIFTRSELLDLVWGYDFGGDTRTVDTHIQRLRKKLDAGDLIITVFGIGYKFGKQVE
>NZ_CP007806.1|WP_003335818.1|3367125_3368583_-|HAMP-domain-containing-histidine-kinase
MIGTIRAKFIIGFLLIFLFSFLILNQTVKEIIWTSNQKIVTSELVGLKNNSNVYVRQAFLINHFSNNKLYFSQMAQDLVSDLNHATGSNVGVYTLEGVLLYSSDKLVFSGQQEEDLKQAIGGKTAYHITYDQNNGEVFFSYPVVIDGSKVGILRFAKDFSLLYEQSGRILDIIFYSSLALFAVAFLFSYILSRHLSIPLVKLTHASTEVKNGNLDVRIHFHRKDEIGRLAVNFNDMIERISTQISTIERDRDLLKEVNQQEKRFFDNITHELKTPLTSILGYAEIIREKGETDRAFFEKGINHIIEESRRLHRMVLKLLEISRRTSKNYEFDRVDTGIILHDVCDSMSFRAKRYKRKIVWRTEENLFVYGQADKLRQLFINLLDNAIKYSSTYAEISVKGELSAGNVRVECKNPGNPIAPEQLTKLFQPFYSANVKGAEEGSVGLGLSIAKSIVDDHGGKISIVSENDYTSVFVEIPCMKAEILS
>NZ_CP007806.1|WP_003335820.1|3365971_3367129_-|WD40-repeat-domain-containing-protein
MMNSRSLLTSGVLLLFLAIFLSGCMQGPRSETIVIPSKEETHTDELNSRPFQVKAIYRFINTFVETDQMLGWSATDSVIGLFRKASTTEGVTWNLGRLPFPYEKLKLLKKIDANTDFFELSPDGKKISKMAMSASGASLKLISLPDGKETEVVIYHSRQNLYLQDVGWSNNSRYVCFLIIDASMKGNARVGVYDNDSGSYKTYQLRDIDRGRTLTGVNISDDGHSVLLTLFENKSNRSNRIVMGMINGSEITVQYEHQTGREQNAWLNNDQFVYLGTDGTLYEYDRRTSELTVLLDKVSNFEFSRDRKYVAYSLYDKDTILVGKLQGKNVLYEEPVYHGVIPSKIFWSPDNKSLLIHGRKYYSSVQGGLVESNTSDEPPFVLTFQ
>NZ_CP007806.1|WP_003335821.1|3363594_3364803_+|DUF418-domain-containing-protein
MSVSSKTPDEFGSEYKTGASIADAVASKNNGLKKNAVAGKSKGRLVALDAARGLAVIGMYLQHFGLNERIAAIVSGNTTLLFVLCGGISYSIMAQRMKDRETETAVFRTRMLARAVFIDVIGYLLILLNTSYGVILPAYAAMFVLALVLIRRSTRVLITTAIALTVVAPPLMILGTSVLSGAYLLYDIAGGPMSALALAPAFVAGMAIGRLELTKIHTALSLAGGGIIMLVVGKGLGAFVLPGLRPSFEAWLIGVQSTVSNQPDPNAIWPLNAEPPLWNMLLWTSPHSASTFQTLIGLGGAFLVLGLVFLVPKKTSAVLMPFAAVGRVALTMYAAQFIVIWCLRLAGIEYGLEGIPFSDLLVAVATLVTGWLIARLPNGPLESLMRHFDQAFIASRTAPLAR
>NZ_CP007806.1|WP_003335806.1|3377635_3378628_+|glycosyltransferase
MKILALLSFEIFRFSIGKSLEKLGHEVIYLDNFDEHLLELTINTFKPEIAFSMGWEVWHVSFFKTGKFPLIKELLKKYNIFHIYFAEEDWLHHDRWSKSYVEAIQPNYVLTRSTICVEKYQNLGIPSMFFDVGCNPDIHRPVPIDPKYQCDVAVVANGHFGFGEIRHKSICDLVFSLINQPFKTKIFGKGWENVQHHFSDINLPSEMLHGSIAYTETPKIYNSAKISISLQTCNDQLSNRTFDIMSSGGFLLTSDTPAVRIKLIPGVNCVISNSAKETVEKITYYLVHEKQRNQIAKAGRDYAIRHFDYKNTLHDVWPNILAEYMNTLFL
>NZ_CP007806.1|WP_041752239.1|3378987_3380109_+|hypothetical-protein
MDRNDVGGLILAKNNETKSELGKIIVVFGTVLGIGVGSIYCLYHFVFDSKNATAVITTAHPEAAKNAGSEGVSKLNEAENSESQTSPPVDKVNNPSEAGFEPFYASLQMDEYVAVYNQNGTEKVLSLDLTKEEVKTLLGNPKSESYVDNGTRSLCYRYGSLSIFFDDEDQSISYMTYEGTKELLNKQWLSSLTKTLDSGDVNFYESPTRNTMVKVDHYPETDEVVVYLSKQYPQDQSLTAPSTEQPHVVQTPAPTPQNANTSTEEQMNTNGGYLLSPGEEIVIENIQVTNDSRVHTTKYNIYVNYHFAFNSPNMVKVITDPEKNLELMPGETATVQIKVKASKSAPKARYRFIVSLTQGWSMQPLKDFTVEVK
>NZ_CP007806.1|WP_003335803.1|3380792_3381419_+|hypothetical-protein
MKNNLKKSSVRLTALGLVTAIALSGGLQVRANENPAQNTVAQNQDSAGLYAGGYKKITASEALADKDVKAAIDRVYAQFQETKSYEINAYEDVVSKGEYDKYVIRLEKDSENFFHFAVDAKTGKVSYTIQSLTAAEVLSYAKSGIDKIYALYPETKSYEITSANVIDNYVSNFSRYNITFSEKDSKRSITFGINAKTGEIITPEKKEV
>NZ_CP007806.1|WP_003335801.1|3381934_3382219_+|hypothetical-protein
MSCSSRIKASRYCPRRRINVDIVTLIFNNIDGDIIDFKIEGSADPCVALIAVGLRVSNARHCLLSNRFKITKRTPNLLVFERINLKKRKKKTKK
>NZ_CP007806.1|WP_003335800.1|3382433_3383642_-|MFS-transporter
MTSTYNQNPRIVRNILFLLFALPGISFASWVSRTPAVRDLLQLSTAEMGIIIFALAAGSLLGLLTTGSVIARKGACLVIMVSSLLIVIGFAAIGVGTALTSVPVVMGGLLIFGCGYGSAEVALNVEGSAVEKVLNRTLLPAFHGFFIVGTLVGAAISAGALALHLPILVHFLILALLMAAAVYYCYRYLPENTGKEQMEVGTPKHSAVKQQLKVWNEKRTLLIGIIVLGMAFAEGSANDWLPLVMVNGYGVNALTGSFVYDLFVAAMTMGRLTGGKFLDRFGRERVLLGCSIAATIGLLLVIWGQHYLVASVGVVLWGLGASLGFPVGLSAAGDEPQGAAARVGAVATTGYIAFLVGPPVLGFLGEHFGLLRALIAVFIGIIIAGSLSRAARPLQNQNITKS
>NZ_CP007806.1|WP_003335797.1|3384215_3384833_-|sugar-O-acetyltransferase
MNQKERMLAGLPYKAWLDGLSEERTENRLKIQEYNLSNPNEEAKRNDLIRRILGKTGPIVYIEPPFHCDYGKNIEVGNNFYANFNCTILDVGKVVIGENVMFAPNVSIYTAGHPVHPDSRNSGYEYGIPITIGDNVWIGGNVVINPGVTIGNNVVIGAGSVVTKDIPDNVIAVGNPCRVIREITEDDRKYYFKDREFDVEDYLPN
>NZ_CP007806.1|WP_003335795.1|3385160_3385310_-|hypothetical-protein
MRQKEELVDNQKQKYESSVGFMFFGLMLYAAKAFREDGRIDLFEPHVCD
>NZ_CP007806.1|WP_003335794.1|3385311_3386301_-|ROK-family-protein
MSKKVNLIKEINLNKVRSALLDVETATKSQLAEFTGLSVVTVNSLINTLMDTGEVLPDLVLHSASGRPAASFRYNSTFRLALMIYMHEYYGQDTVFYGVVNLRGEVIQRTQHAISNVNVDSFDNHIENLLAQFPAIKAICFGIPGAEVNQKIVISDYEEMREQSLSGHVSAKFHLPVLIENDINAAVMGYCHLNQIRSDECVIGLYFPDKYPPGAGIYLNGKVYKGRNGLAGEIKYFPFGVHWESFNYNSEEMEDVMFKTIKAFLCMYNPDRIVLYGANIRHRITEIIHERCLLPLEKMMLPEIITSADLNTDFEAGIKHSALSMIDTR
>NZ_CP007806.1|WP_003335792.1|3386761_3387208_+|GNAT-family-N-acetyltransferase
MELILKEVTSEDWEECIELQPHEDQKHFIASNLYSLAQSKFLPNFETLAVYKDQIMVGFVMFGIDPDDSQYWIYRLMIASGHQGKGYGIETMKQVIDKIKAKPDTTDIMVAYHPDNQAAASLYEKLGFQVLGKAPWGEIMARLSRKLT
>NZ_CP007806.1|WP_041752241.1|3387416_3388073_-|ATP-binding-cassette-domain-containing-protein
MKENTSLLKISQLTKTYGNQLIFKNLDLLVDTGEWVGIVGENGAGKSTFVRIITGLEKYSHGQIYLDGRTMATFSKKEWVQQIQLVTQYTRRALDPTKTIKQLLFEPLKQFQLARKEEYLPKVESVLSRCNLSVDILAKRSLEISGGQYQRICIALALLVQPKLLICDEATSSLDKINELWIIKLLKEQENMAVLFISHNKKLLKEVCDHSIQLEDYK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007806_2	2.1\|3375390\|58\|NZ_CP007806\|CRISPRCasFinder	3375390-3375447	58	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1363312-1363369	3	0.948

1. spacer 2.1|3375390|58|NZ_CP007806|CRISPRCasFinder matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.948

agaaatagagcttccttcgaaaaccactatctctgaatcacccaacacgctagaacaa	CRISPR spacer
agaaatagaacttccttcgaaaaccactatctctgaatcgcccaacacgctagaacag	Protospacer
*********.*****************************.*****************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

611989 : 618880

Pneumococcus_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003335541.1\|611989_613180_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	3.4e-29	28.5
WP_003335540.1\|613255_613444_-	hypothetical protein	NA	NA	NA	NA
WP_003335539.1\|613525_614356_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.6e-57	42.3
WP_003335538.1\|614415_615252_-	DUF4915 domain-containing protein	NA	NA	NA	NA
WP_003335537.1\|615407_616082_+	adenylyl-sulfate kinase	A0A2K9L4R9	Tupanvirus	3.5e-23	42.7
WP_003335536.1\|616434_617103_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.5e-66	55.8
WP_003335535.1\|617086_617575_+	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	1.7e-59	69.6
WP_119912803.1\|617564_618311_+	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	8.0e-61	47.4
WP_041751932.1\|618373_618880_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-53	63.8

DBSCAN-SWA_2

2205016 : 2249787

Brevibacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003337249.1\|2205016_2206024_-	replication initiation protein	A0A0K2CNV5	Brevibacillus_phage	2.5e-17	24.2
WP_003337250.1\|2206309_2206546_+	hypothetical protein	A0A0K2CPH0	Brevibacillus_phage	1.3e-12	43.6
WP_041752551.1\|2206744_2207011_+	hypothetical protein	A0A0K2CNW3	Brevibacillus_phage	5.0e-26	63.5
WP_003337252.1\|2207367_2208426_+	hypothetical protein	A0A0K2CNX7	Brevibacillus_phage	5.9e-142	77.0
WP_031309176.1\|2208587_2209079_+	hypothetical protein	A0A0K2CPC8	Brevibacillus_phage	2.9e-51	68.7
WP_022584841.1\|2209264_2209414_+	hypothetical protein	A0A0K2CP74	Brevibacillus_phage	2.5e-06	54.2
WP_119912807.1\|2209479_2213961_+	hypothetical protein	A0A0K2CPN3	Brevibacillus_phage	1.3e-219	37.4
WP_003337256.1\|2214087_2214705_+	S-layer homology domain-containing protein	A0A0K2CPJ2	Brevibacillus_phage	7.0e-87	73.3
WP_003337257.1\|2214704_2215757_+	hypothetical protein	A0A0K2CP35	Brevibacillus_phage	1.3e-130	60.7
WP_003337258.1\|2215767_2219229_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0K2CNY2	Brevibacillus_phage	0.0e+00	64.3
WP_003337259.1\|2219347_2219764_+	hypothetical protein	A0A0K2CP80	Brevibacillus_phage	1.3e-44	62.6
WP_041752553.1\|2219767_2220154_+	hypothetical protein	A0A0K2CPN7	Brevibacillus_phage	1.2e-52	71.1
WP_003337261.1\|2220170_2222831_+	PKD domain-containing protein	A0A0K2CPJ7	Brevibacillus_phage	2.0e-300	58.9
WP_003337262.1\|2222870_2224292_+	hypothetical protein	A0A0K2CP42	Brevibacillus_phage	1.5e-196	68.6
WP_003337263.1\|2224326_2226162_+	major virion structural protein	A0A0K2CNY7	Brevibacillus_phage	4.0e-263	70.1
WP_041752091.1\|2226184_2230330_+	hypothetical protein	A0A0K2CP84	Brevibacillus_phage	7.0e-05	54.5
WP_003337265.1\|2230305_2231424_+	hypothetical protein	A0A0K2CPP1	Brevibacillus_phage	4.4e-140	63.3
WP_003337266.1\|2231437_2232271_+	hypothetical protein	A0A0K2CPK2	Brevibacillus_phage	1.3e-88	60.6
WP_003337267.1\|2232346_2233579_+	hypothetical protein	A0A0K2CP47	Brevibacillus_phage	6.9e-09	68.8
WP_003337268.1\|2233818_2234310_+	hypothetical protein	A0A0K2CNZ3	Brevibacillus_phage	6.4e-43	55.8
WP_003337270.1\|2234358_2234976_+	hypothetical protein	A0A0K2CP89	Brevibacillus_phage	6.6e-61	56.4
WP_003337271.1\|2234960_2237951_+	hypothetical protein	A0A0K2CPK6	Brevibacillus_phage	1.7e-13	35.4
WP_003337272.1\|2237988_2241789_+	LamG domain-containing protein	A0A0K2CP88	Brevibacillus_phage	9.8e-30	26.8
WP_003337273.1\|2242006_2242324_+	hypothetical protein	A0A0K2CNZ6	Brevibacillus_phage	3.5e-10	60.0
WP_141397653.1\|2242420_2242612_+	hypothetical protein	NA	NA	NA	NA
WP_003337275.1\|2242608_2242905_+	hypothetical protein	A0A0K2CPL0	Brevibacillus_phage	2.8e-17	51.6
WP_003337276.1\|2243619_2244153_+	sigma-70 family RNA polymerase sigma factor	A0A0K2CPD2	Brevibacillus_phage	1.3e-49	57.4
WP_003337277.1\|2244520_2245651_+	hypothetical protein	A0A0K2CPR2	Brevibacillus_phage	2.7e-137	60.8
WP_041752093.1\|2245653_2245869_+	hypothetical protein	A0A0K2CP13	Brevibacillus_phage	1.7e-24	64.8
WP_003337280.1\|2245903_2246137_+	hypothetical protein	NA	NA	NA	NA
WP_003337281.1\|2246123_2246408_+	hypothetical protein	NA	NA	NA	NA
WP_003337282.1\|2246442_2246772_+	hypothetical protein	A0A0K2CPQ6	Brevibacillus_phage	2.5e-30	52.3
WP_003337283.1\|2246873_2247203_+	hypothetical protein	NA	NA	NA	NA
WP_003337284.1\|2247240_2247528_+	hypothetical protein	A0A0K2CP23	Brevibacillus_phage	8.7e-16	43.0
WP_041752094.1\|2247524_2247770_+	hypothetical protein	A0A0K2CNT1	Brevibacillus_phage	2.9e-12	43.8
WP_003337286.1\|2247940_2248552_+	transglycosylase SLT domain-containing protein	A0A0K2CNS6	Brevibacillus_phage	1.8e-34	48.9
WP_081870807.1\|2248734_2249787_+	RNA polymerase subunit sigma	A0A0K2CPD8	Brevibacillus_phage	3.8e-109	62.1

DBSCAN-SWA_3

2353191 : 2362790

Bacillus_virus(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003337401.1\|2353191_2354013_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.4e-74	55.5
WP_003337402.1\|2354014_2354653_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	G3MA22	Bacillus_virus	2.9e-35	39.2
WP_003337403.1\|2354667_2356302_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.8e-112	46.6
WP_003337404.1\|2356355_2356910_-	cysteine hydrolase	G3MA16	Bacillus_virus	6.6e-36	45.1
WP_003337405.1\|2356985_2357762_-	NUDIX hydrolase	G3MA14	Bacillus_virus	3.5e-51	48.6
WP_003337406.1\|2358090_2358474_+	VOC family protein	NA	NA	NA	NA
WP_003337408.1\|2359230_2360385_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.0e-54	36.7
WP_003337409.1\|2360400_2361075_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.6e-36	43.0
WP_003337410.1\|2361100_2362297_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	8.5e-105	49.9
WP_003337412.1\|2362316_2362790_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.4e-39	53.6

DBSCAN-SWA_4

3407741 : 3489778

Brevibacillus_phage(73.17%)

integrase,tRNA,tail,capsid,transposase,holin,plate

attL 3404448:3404468|attR 3460091:3460111

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3404448:3404468	attL	NA	NA	NA	NA
WP_003338835.1\|3407741_3408641_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.1e-46	41.4
WP_003335764.1\|3409778_3410399_-	glycoside hydrolase family 73 protein	A0A0K2CP65	Brevibacillus_phage	1.2e-110	93.7
WP_154071885.1\|3410637_3410790_-	hypothetical protein	A0A0K2CND1	Brevibacillus_phage	2.4e-12	90.7
WP_003335761.1\|3411010_3411391_-	VOC family protein	NA	NA	NA	NA
WP_003335759.1\|3412466_3419480_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	2.9e-88	24.7
WP_003335758.1\|3420015_3420315_-	hypothetical protein	G9BWD6	Planktothrix_phage	1.7e-06	46.3
WP_003335757.1\|3420271_3420682_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	5.4e-19	44.6
WP_003335756.1\|3420699_3420960_-	hypothetical protein	NA	NA	NA	NA
WP_041752253.1\|3421659_3421938_-	YolD-like family protein	S5MAC2	Brevibacillus_phage	2.5e-44	89.0
WP_003335754.1\|3422067_3422238_+	hypothetical protein	NA	NA	NA	NA
WP_003343659.1\|3422259_3422421_+	hypothetical protein	NA	NA	NA	NA
WP_022586652.1\|3422436_3422733_+	hypothetical protein	NA	NA	NA	NA
WP_003335750.1\|3423190_3423592_+	hypothetical protein	NA	NA	NA	NA
WP_003335748.1\|3423887_3424091_-	glucosaminidase domain-containing protein	A0A0K2CP65	Brevibacillus_phage	2.6e-22	91.7
WP_003335745.1\|3424978_3425191_-	hypothetical protein	NA	NA	NA	NA
WP_003335744.1\|3425415_3427167_+	AIPR family protein	E5G6M2	Salmonella_phage	4.2e-20	24.3
WP_003335742.1\|3427941_3428760_+	hypothetical protein	NA	NA	NA	NA
WP_154071886.1\|3428825_3429002_+	hypothetical protein	NA	NA	NA	NA
WP_003335740.1\|3429091_3429229_-\|transposase	transposase	NA	NA	NA	NA
WP_119912812.1\|3429248_3429554_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2I6AZV9	Macacine_betaherpesvirus	1.3e-17	48.0
WP_003335738.1\|3429666_3429795_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_158332776.1\|3429791_3430142_-	hypothetical protein	NA	NA	NA	NA
WP_003335133.1\|3430351_3430648_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158332762.1\|3430665_3431511_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	2.0e-47	41.0
WP_003335736.1\|3431760_3432714_-	ETX/MTX2 family pore-forming toxin	NA	NA	NA	NA
WP_003335734.1\|3433427_3434087_+	hypothetical protein	NA	NA	NA	NA
WP_003335733.1\|3434100_3434658_+	hypothetical protein	NA	NA	NA	NA
WP_164496774.1\|3435140_3435770_-	VanZ family protein	NA	NA	NA	NA
WP_003343687.1\|3437711_3439043_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_003335725.1\|3439091_3439499_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_041752627.1\|3439720_3442093_-	penicillin-binding protein	NA	NA	NA	NA
WP_003335722.1\|3442287_3443556_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_003335721.1\|3443577_3444867_-	GTPase HflX	NA	NA	NA	NA
WP_003335720.1\|3445090_3446065_-	AAA family ATPase	G3MAX6	Bacillus_virus	2.2e-50	40.1
WP_003335719.1\|3446202_3447858_-	hypothetical protein	NA	NA	NA	NA
WP_051876123.1\|3447848_3448403_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003335717.1\|3448762_3449584_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_051876124.1\|3449966_3452738_+	NTTRR-F1 domain	NA	NA	NA	NA
WP_003337170.1\|3452993_3453920_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_173645584.1\|3453924_3454719_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	1.1e-12	26.1
WP_003337168.1\|3454868_3455111_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_003337167.1\|3455140_3456094_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003337166.1\|3456090_3456882_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003337165.1\|3458303_3459008_-	hypothetical protein	S5M5V1	Brevibacillus_phage	5.9e-122	95.7
WP_041752263.1\|3459480_3459705_+	XRE family transcriptional regulator	S5MBY6	Brevibacillus_phage	6.5e-35	97.3
WP_003337163.1\|3459795_3460134_-	YolD-like family protein	S5MAC2	Brevibacillus_phage	7.8e-56	90.1
3460091:3460111	attR	NA	NA	NA	NA
WP_003337162.1\|3460448_3461663_+	kelch repeat protein	A0A0K2CNX3	Brevibacillus_phage	2.4e-67	54.8
WP_003337161.1\|3461960_3462617_+	hypothetical protein	NA	NA	NA	NA
WP_003337160.1\|3462606_3463770_+	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	3.4e-42	30.9
WP_003337159.1\|3463990_3464413_+	hypothetical protein	NA	NA	NA	NA
WP_003337157.1\|3464490_3465051_-	DUF3238 domain-containing protein	NA	NA	NA	NA
WP_003337156.1\|3465163_3465403_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003337155.1\|3465408_3465936_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003337154.1\|3466034_3466658_-	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	1.6e-110	92.3
WP_119912689.1\|3466654_3466897_-	hypothetical protein	S5MNY8	Brevibacillus_phage	3.6e-31	91.2
WP_003337152.1\|3466896_3467367_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_041752629.1\|3467770_3467983_-	hypothetical protein	NA	NA	NA	NA
WP_003337150.1\|3468038_3468473_-	hypothetical protein	S5M9X7	Brevibacillus_phage	3.2e-78	97.2
WP_003337149.1\|3468517_3469990_-	hypothetical protein	S5M9X7	Brevibacillus_phage	2.7e-193	69.9
WP_003337148.1\|3470006_3470405_-	hypothetical protein	S5MU74	Brevibacillus_phage	1.5e-66	97.0
WP_003337147.1\|3470401_3470725_-	hypothetical protein	S5M5T9	Brevibacillus_phage	7.4e-48	91.6
WP_003337146.1\|3470709_3471288_-	DUF2313 domain-containing protein	S5MNM6	Brevibacillus_phage	1.0e-100	95.3
WP_003337145.1\|3471297_3472419_-\|plate	baseplate J/gp47 family protein	S5MBX0	Brevibacillus_phage	5.3e-202	94.4
WP_003337143.1\|3472435_3472822_-	DUF2634 domain-containing protein	S5M9X2	Brevibacillus_phage	3.4e-63	93.0
WP_003337142.1\|3472818_3473169_-	hypothetical protein	S5MU69	Brevibacillus_phage	1.2e-62	96.6
WP_003337141.1\|3473165_3474308_-	hypothetical protein	S5M5T7	Brevibacillus_phage	2.1e-222	98.9
WP_003337140.1\|3474300_3474897_-	LysM peptidoglycan-binding domain-containing protein	S5MNM1	Brevibacillus_phage	9.4e-89	81.8
WP_003337139.1\|3474896_3477776_-\|tail	phage tail tape measure protein	S5MBW5	Brevibacillus_phage	0.0e+00	89.4
WP_003337137.1\|3478027_3478375_-	hypothetical protein	S5MU64	Brevibacillus_phage	1.6e-51	88.7
WP_003337136.1\|3478387_3478822_-	hypothetical protein	S5M5T1	Brevibacillus_phage	1.1e-75	99.3
WP_041752267.1\|3478821_3480348_-\|tail	phage tail protein	S5MNL6	Brevibacillus_phage	9.9e-284	95.3
WP_003337132.1\|3480894_3481452_-	hypothetical protein	S5MC52	Brevibacillus_phage	1.4e-97	98.9
WP_003337131.1\|3481451_3481856_-	hypothetical protein	S5M9W2	Brevibacillus_phage	1.5e-66	99.2
WP_003337130.1\|3481855_3482383_-	hypothetical protein	S5MU57	Brevibacillus_phage	1.6e-92	93.7
WP_003337129.1\|3482351_3482690_-	hypothetical protein	S5MNV6	Brevibacillus_phage	1.2e-27	54.2
WP_041752632.1\|3482704_3485638_-	hypothetical protein	S5M5S9	Brevibacillus_phage	0.0e+00	71.5
WP_041752269.1\|3485693_3485921_-	hypothetical protein	NA	NA	NA	NA
WP_119912691.1\|3485931_3488082_-\|capsid	minor capsid protein	S5MNL1	Brevibacillus_phage	6.9e-307	74.7
WP_003337125.1\|3488095_3489778_-	hypothetical protein	M4MCI5	Vibrio_phage	2.7e-40	31.1

DBSCAN-SWA_5

3499795 : 3516036

Brevibacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003337106.1\|3499795_3500323_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	D2XR49	Bacillus_phage	8.5e-41	54.9
WP_003337105.1\|3500325_3500514_-	hypothetical protein	NA	NA	NA	NA
WP_003337104.1\|3500510_3500744_-	hypothetical protein	NA	NA	NA	NA
WP_003337103.1\|3500775_3501441_-	hypothetical protein	NA	NA	NA	NA
WP_003337101.1\|3501461_3501995_-	hypothetical protein	A0A0C5AJ42	Paenibacillus_phage	4.9e-28	42.3
WP_003337099.1\|3502369_3502546_-	hypothetical protein	NA	NA	NA	NA
WP_003337098.1\|3502545_3503880_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.0e-98	46.5
WP_003337097.1\|3503872_3504685_-	ATP-binding protein	S5MU12	Brevibacillus_phage	6.1e-14	31.9
WP_003337096.1\|3504626_3505454_-	phage replisome organizer N-terminal domain-containing protein	V9QKF6	Oenococcus_phage	4.6e-41	37.3
WP_154071874.1\|3505468_3505639_-	hypothetical protein	NA	NA	NA	NA
WP_164496763.1\|3505642_3505804_-	hypothetical protein	NA	NA	NA	NA
WP_003337095.1\|3505821_3506241_-	single-stranded DNA-binding protein	S5MNH0	Brevibacillus_phage	1.6e-50	71.9
WP_119912694.1\|3506252_3506984_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A0A7RVR3	Clostridium_phage	7.8e-53	46.8
WP_003337093.1\|3507021_3507903_-	hypothetical protein	A0A0A7S0A9	Clostridium_phage	5.5e-93	64.1
WP_003337092.1\|3507984_3508203_-	hypothetical protein	NA	NA	NA	NA
WP_119912695.1\|3508220_3508409_-	hypothetical protein	S5MNR1	Brevibacillus_phage	2.2e-07	65.3
WP_003337090.1\|3508500_3508758_-	hypothetical protein	NA	NA	NA	NA
WP_003337089.1\|3508741_3508978_-	hypothetical protein	NA	NA	NA	NA
WP_003337088.1\|3509039_3509744_+	hypothetical protein	NA	NA	NA	NA
WP_003337086.1\|3509740_3510016_-	hypothetical protein	NA	NA	NA	NA
WP_041752278.1\|3509999_3510182_-	hypothetical protein	S5MUE4	Brevibacillus_phage	7.7e-18	73.3
WP_041752280.1\|3510342_3510612_-	group-specific protein	S5MC08	Brevibacillus_phage	1.5e-38	80.9
WP_003337083.1\|3510736_3510958_-	helix-turn-helix domain-containing protein	A0A1B0T6C2	Bacillus_phage	1.1e-05	38.5
WP_003337082.1\|3510972_3511758_-	Rha family transcriptional regulator	A0A2I7SDG8	Paenibacillus_phage	9.9e-54	49.6
WP_041752282.1\|3511792_3511987_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_051876125.1\|3512157_3512535_+	helix-turn-helix transcriptional regulator	A6XML9	Bacillus_virus	9.1e-13	45.3
WP_003337079.1\|3512564_3512720_-	hypothetical protein	NA	NA	NA	NA
WP_003337078.1\|3512897_3513044_-	hypothetical protein	NA	NA	NA	NA
WP_041752284.1\|3513045_3514356_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003337074.1\|3515226_3516036_-	hypothetical protein	S5M5V5	Brevibacillus_phage	1.6e-107	76.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007806

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection