CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015682	Thermodesulfobacterium geofontis OPF15, complete sequence	3 crisprs	csa3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cas2,cas1,cas5,cas3,cas4,Cas9_archaeal	0	7	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_015682_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015682_1

317845-318152

Orphan

Consensus_repeat	Method
GAGATGNANNNAAGNTTTGAGGC	CRT

5 spacers

The CRISPR arrays of NC_015682_1

>merge|NC_015682|1|317845-318152|CRT
GAGAAGGAAAAAGAATTAAAGGCTATTTCTTTGCTTGAGAGGCTTATTAGGGTGGAAGAGGAGCTTAAGGCTCTGAGAGAAGAGATGAAAGTAAGATTTGAGGCAAATGACAAGAGGTTCGAATCTTTGCTTAGGGAGATGAATGCAAGGTTTGAGGCTGTATTAGCTGAGCAGAGGGCTTTAAGAGAGGAGATGAATGCAAGGTTTGAAGCTATTGATAATAGATTTGAAGCTTTGCAAAGGGAGATGAATGCAAGGTTTGAGGCAATGGATAAAAGATTTGAGGCTATGGATAAGAGATTTGAGGC

>NC_015682|1|1|317845-318152|CRT
GAGAAGGAAAAAGAATTAAAGGC	TATTTCTTTGCTTGAGAGGCTTATTAGGGTGGAAGAGGAGCTTAAGGCTCTGAGAGAA
GAGATGAAAGTAAGATTTGAGGC	AAATGACAAGAGGTTCGAATCTTTGCTTAGG
GAGATGAATGCAAGGTTTGAGGC	TGTATTAGCTGAGCAGAGGGCTTTAAGAGAG
GAGATGAATGCAAGGTTTGAAGC	TATTGATAATAGATTTGAAGCTTTGCAAAGG
GAGATGAATGCAAGGTTTGAGGC	AATGGATAAAAGATTTGAG
GCTATGGATAAGAGATTTGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015682.1\|WP_013909126.1\|312123_312759_+\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|238317
NC_015682.1\|WP_013909133.1\|318249_319641_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273648
NC_015682.1\|WP_013909124.1\|310535_311399_+\|VIT1/CCC1-transporter-family-protein	unknown	unknown	gnl\|CDD\|153122
NC_015682.1\|WP_013909129.1\|313757_314564_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143586
NC_015682.1\|WP_013909134.1\|319669_319969_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_015682.1\|WP_013909128.1\|313384_313591_-\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_081460660.1\|325445_325592_+\|DUF2283-domain-containing-protein	unknown	unknown	gnl\|CDD\|378367
NC_015682.1\|WP_013909140.1\|324924_325077_+\|DUF2281-domain-containing-protein	unknown	unknown	gnl\|CDD\|378366
NC_015682.1\|WP_144011509.1\|325356_325437_+\|DUF2283-domain-containing-protein	unknown	unknown	unknown
NC_015682.1\|WP_013909127.1\|312755_313385_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NC_015682.1\|WP_013909130.1\|314583_315210_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|234811
NC_015682.1\|WP_013909123.1\|309029_310442_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366859
NC_015682.1\|WP_013909138.1\|322368_323694_+\|virulence-factor-MVIN-family-protein	unknown	unknown	gnl\|CDD\|223800
NC_015682.1\|WP_013909139.1\|323887_324814_+\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|379306
NC_015682.1\|WP_013909136.1\|320514_321441_+\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|379306
NC_015682.1\|WP_013909131.1\|315921_317175_-\|response-regulator	unknown	unknown	gnl\|CDD\|226229
NC_015682.1\|WP_013909141.1\|325753_325954_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_013909125.1\|311429_312122_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274164
NC_015682.1\|WP_013909137.1\|321823_322024_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_049774808.1\|315315_315798_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|224101

Protein	Function_ID	Function_description	E-value
NC_015682.1\|WP_013909126.1\|312123_312759_+\|thiamine-phosphate-synthase	gnl\|CDD\|238317	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.	2.26351e-75
NC_015682.1\|WP_013909133.1\|318249_319641_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	gnl\|CDD\|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NC_015682.1\|WP_013909124.1\|310535_311399_+\|VIT1/CCC1-transporter-family-protein	gnl\|CDD\|153122	cd02431, Ferritin_CCC1_C, CCC1-related domain of ferritin. Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea. .	5.41558e-54
NC_015682.1\|WP_013909129.1\|313757_314564_+\|hypothetical-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.43811e-07
NC_015682.1\|WP_013909134.1\|319669_319969_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	5.73915e-07
NC_015682.1\|WP_013909138.1\|322368_323694_+\|virulence-factor-MVIN-family-protein	gnl\|CDD\|223800	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only].	7.3847e-44
NC_015682.1\|WP_013909140.1\|324924_325077_+\|DUF2281-domain-containing-protein	gnl\|CDD\|378366	pfam10047, DUF2281, Protein of unknown function (DUF2281). Members of this family of hypothetical bacterial proteins have no known function.	0.000648813
NC_015682.1\|WP_013909127.1\|312755_313385_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	1.00528e-25
NC_015682.1\|WP_013909130.1\|314583_315210_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|234811	PRK00685, PRK00685, metal-dependent hydrolase; Provisional.	4.20344e-40
NC_015682.1\|WP_013909123.1\|309029_310442_+\|hypothetical-protein	gnl\|CDD\|366859	pfam01920, Prefoldin_2, Prefoldin subunit. This family includes prefoldin subunits that are not detected by pfam02996.	0.00159553
NC_015682.1\|WP_081460660.1\|325445_325592_+\|DUF2283-domain-containing-protein	gnl\|CDD\|378367	pfam10049, DUF2283, Protein of unknown function (DUF2283). Members of this family of hypothetical bacterial proteins have no known function.	0.00429634
NC_015682.1\|WP_013909139.1\|323887_324814_+\|DUF4143-domain-containing-protein	gnl\|CDD\|379306	pfam13635, DUF4143, Domain of unknown function (DUF4143). This domain is almost always found C-terminal to an ATPase core family.	3.45806e-40
NC_015682.1\|WP_013909136.1\|320514_321441_+\|DUF4143-domain-containing-protein	gnl\|CDD\|379306	pfam13635, DUF4143, Domain of unknown function (DUF4143). This domain is almost always found C-terminal to an ATPase core family.	3.13074e-40
NC_015682.1\|WP_013909131.1\|315921_317175_-\|response-regulator	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	2.76143e-61
NC_015682.1\|WP_013909125.1\|311429_312122_+\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274164	TIGR02495, RADICAL-ACTIVATING_ENZYME, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG, which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	5.54419e-53
NC_015682.1\|WP_049774808.1\|315315_315798_-\|radical-SAM-protein	gnl\|CDD\|224101	COG1180, PflA, Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones].	3.10387e-22

>NC_015682.1|WP_013909131.1|315921_317175_-|response-regulator
MSKILLVDDDKIVLRVLSKIIGEKIKLPTDQVMNFKELERVVSENSYLLCVCDYHLPDAEHGEAIDFLIKNKIPTIVLTASYDEKIREEILEKGVVDYLVKGTPNILEHVIYAITRALKNRNTKILIVDDSQTDRALMKKILKNMLFQVFEAKSGLETLEILSANPDIKLIVLDYYLPEEDTVELIYSIREKFKKNEVGIIVVSGIIKSNMIPILLKAGANDFLSKPFSKEEFMVRINNTIEMLDMIKELEFYAYRDPLTGLHNRRYFFEEAPKLWTLAKRQNSKLACIVIDIDDFKKINDIYGHSVGDEVLKDFAKHLKNFFRRKSDLIARTGGEEFTLLVGYEEKEKLLEYLEKFRKHIEENILKLKENSKELEIRYTISMGVELELTNSLKEMIILADRKLYKSKEKGKNSITF
>NC_015682.1|WP_049774808.1|315315_315798_-|radical-SAM-protein
MEFLSLFFCFWENIWDFFNHSKSNFRNKKLNCQETSLSFNEPTFLLEYAVDVFKLAKSYGYYNTYVTNGYMSEKALQLLISAGLDGINIDIKGDKKVVKLYCNADAEKIWRNAKIAKEKGIKTLEAGIEIGKDIRLKYVYCGNVPGHKFENTIALIVELF
>NC_015682.1|WP_013909130.1|314583_315210_+|MBL-fold-metallo-hydrolase
MVKDLIKKIQWLGHDCFLIKSDLIIYFDPFQIKTGPKADIIFVTHPHYDHCSPEDIKKIAKEDTIIVTEKDSAKMLTGKIEIMKVGEEKTVKGIKVKAVPAYNIGKTFHTKDKGWLGFVVEIEGVKIYHAGDTDFIPEMKDIKTDIALLPVSGTYVMTADEAVSATLTIKPQIAIPMHYGSIVGSEKDAEKFAKALEGKIEVIILPKS
>NC_015682.1|WP_013909129.1|313757_314564_+|hypothetical-protein
MKKNILIGLLFIVIGIFLAGCAGESTKLYMKDVSNTTKTIDFPSGTITGAASKDQAKVLAQIFVDSHNMAMSEFSELKQKTSNIESATKNLEELNKKLEEEIQKLDANTQNILRASQSNLELAKKTLELIEELSKKQGTGEITIFFPVGSSKIKENSFEYQRLVNFLDYLARESKGRKILFISIGSASALGNKKINEKLAKERASAPIEIIKKYLINVPHEIFSVYGVGDFYSPKNVSMKEHERYQHTRLIAVYETEQIPNLPAEPMK
>NC_015682.1|WP_013909128.1|313384_313591_-|hypothetical-protein
MSQEKIVNLDQKIKATPKTSISPINELALKTTKEIVIKFIEMGRCSPATFEEVFTQVFSVVKKTIDED
>NC_015682.1|WP_013909127.1|312755_313385_-|flavodoxin-family-protein
MYLLAIHGSPRKNGNSEILLDYFLKGINQKFISFEKIRLFELNYQPCIECGECETTGECILDDDFKELYKKIWNADFLVVSTPIFFYSHTSYVQAFFERFQAFWARKYLLKLPHPFNKKPKGILLSLGGTKGKKLFEGVVRSFKYVLDTIYGIYLGGLFFRGIDKKGEILNHKDYLELAKNVGFKLSTLSEKEIIESPEKLNLNTSPAP
>NC_015682.1|WP_013909126.1|312123_312759_+|thiamine-phosphate-synthase
MKLSGLYVITDEKLTPYENDEILEKVEKALKGGAKIVQLRDKSHSDEFLLPYAKALKKLCEKYGAIFIVNDRVSLTLSANADGVHLGKEDPFIGEVRKILKDKIIGVSCYGDIRRAKEMEFLGASYVAFGSFFPSPTKPESEIIDKEILLSAKKVLKIPICAIGGITLDKAEELIKLSADMVAIVSDIWKAEDIEKRAKKYREIFKKYGKD
>NC_015682.1|WP_013909125.1|311429_312122_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MIKGFRGTSLIDYPGKIASVIYTYLCNFRCPYCYNIELVVPEEYNKLKDLSEDFILQELSRRKGFIKGVVITGGEPTLWGERLIYLIERIYYEIGLPIKLDTNGSNPELIKTLFNRGILDFLAIDFKTSPKRYHEIGGDFKKVEKTLNIAKAKPEKVEIRITFYPPLVSEKDLKEMIPYLKNFKYIAFQKYVPGKTLEKNEIPPYSQDFYEKAKNLFREFLPEVEIIERF
>NC_015682.1|WP_013909124.1|310535_311399_+|VIT1/CCC1-transporter-family-protein
MEKEILALIENFQKNEITEEYVYRKLAKFVKDKNRETLLRIAEEEGKHASIWGKYTGKKFKPNFIKAFFYLFIAWIFSFTFAIKLMERNEKRAEKAYANLIKKIPEAQSILYEEENHEKELALMLDEERLNYIGSMVLGLNDALVELTGALAGLTFALQNTTLIGITAFIIGISAALSMSASEYLSTRSEEGERSPLKASIYTGIAYILTVIVLVFPYFIFSHFLLALGIAFFGALMIILIFTFFVSVVQERSFIKFFLEMFLVSSGVAILSFFIGILARTIFKVEV
>NC_015682.1|WP_013909123.1|309029_310442_+|hypothetical-protein
MKGKLISKVLLSSLIMGGVFVKTSLAGETPEELKAQIEALKQQIAVMQQQMASMQALIENLQGKVNQVETKTEKLTPQFVAKDSKPIFGKPGLEWQLYGRVKMDYHYDTAQIVYYNDFVGTVKNRWSYDSKNDQYKYDPTYQNDSTNFNPRDTRLGTLVYQKRGDWIVKGQTEIDFYGYNSGNNIIPRMRLAYVDIYNSKTKTSLLFGQDWIPVSQLNPSTIEFGILTAAGNLWWRVPQLTIRQKVFENWELLGSLMMHRRISTSSEERMPWALARIQYKDGVLNKIFDKGSMIAIGGGFKHDAVKREDVSFPKKYFSTESDVDRWLICGEWLFNFKLFDQKFQFKGEAWTGRGIDKEWLRYDLGVNAYGEPIEAYGMWADLVWNINPRLSFTIGAGFDDPNDKEILKGQIGPQALNDRQFTKNTQYFANFWYKLSDNMSIGVEVMRIETERDKWVDTANRFTLSAFYNF
>NC_015682.1|WP_013909133.1|318249_319641_+|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase
MKVLILAGGSGTRLWPASRETYPKQFLKLNGKKSLLQQTIERILKISSPEDIILLTNEQYKFHVLAELNEISENLTDKILLEPARRNTAPAIALGIKYCLERLSVEPSEVLFVCPSDHIIKPVEKFIEYVRLAEKVAKQGYLITFGIKPLYPETGYGYIKITGEDRGGYYPVERFTEKPNLETVKRFLSEGNYFWNSGMFAFTIETMIEELKLYAPEIYQLFNHPLEAMIANFHKMPDISIDYAVMEKSKKVVAIPMDIYWSDIGSWDSLYDVLEKDEKGNVILGNVLTKETEGSLIIGNKRLIATIDLKDLIIVETDDAILIAKKGSAQKVKHIVEELKAWNRVEALEHKTVYRPWGEYTVLEEGPRYKIKRIVVKPGAKLSLQMHYHRSEHWVVVKGTAKVTIGDKVMYVHENESAYVPKSTPHRLENPGKVPLEIIEVQNGEYLGEDDIVRFDDEYGRGS
>NC_015682.1|WP_013909134.1|319669_319969_+|nucleotidyltransferase-domain-containing-protein
MSLSKVRLSTEEIEAIKRIIRQYDEDAQVFLFGSRTDPEKKGGDIDLIVISQKIDDVLRRKIKVDLFLALGDRKIDLIVTDNPYKDLFTKIMIESGIKL
>NC_015682.1|WP_013909136.1|320514_321441_+|DUF4143-domain-containing-protein
MPYKFIVSGSGSLDLKEKIHESLVGRKRVFELYPVSFKEFVNFKTNYRYEESLEEFFEVEKVKTESLLNEYLNFGGYPRVVLEEKLSEKVRIIDEIYRSYLDKDVSYLIKSEKVDVYSSLIKLLAGQIGRLINYSELSSTLGISLQTLKNYLWYAEKTFIIHRLTPYFRNVRKEITKSPVIYFYDLGLRNYALGFFGKVEFSPDIGFLFKNFVFNIIKEKFRFTGASVHFWRTKDKAEVDFVINFGKEVIPIEAKYKKLKEPTVERSLRSFIEKYHPKEAWVINLALEYEVKIDKTIVKFLPFYRLLM
>NC_015682.1|WP_013909137.1|321823_322024_+|hypothetical-protein
MNRFETKLEKELQEIKTLLLELLERDERSKSENEIRGIMKLFEISMKDFFEDEVLYSISDMKKLYK
>NC_015682.1|WP_013909138.1|322368_323694_+|virulence-factor-MVIN-family-protein
MNKIDTNILAPLKNLLNLSSKPEAIRHALIRSSFLNLLARGAGYLKHLAIAILLGFSYKTDAVFMALSLLGIFLLFADVFDSIGVPNLVSARLNGEEDFKSLSALLLTFTLILSFSILVFSIILYPILKHIPIGFSKEAKDYLSISYFLLLPYLFLNFIFHHFGAVLRSLRRFTEYFVGELIFSVSSFIFTALGLYFFRDFRVIPISFSISQVLATLFLLLRAKEFIHLKFYLDERAHLILKHFFYLSALYGVFHLYIFVDRAFASLTGEKGISALTYGLMVVTVPKNIVKLEHMAITALSEVKASMGKINLYIKYSFLISLPFMIGFFILANFLISFFFGYGKFSLVDVELTAEATKYYALSLAFMFIWPILYRASQVLNLLKPVFFIAILGILANALFNYLFVVVYNLGIKGICLATFFAYFILCFLGYLVLYFAQKNS
>NC_015682.1|WP_013909139.1|323887_324814_+|DUF4143-domain-containing-protein
MPYKFIVSGSGSLDLKEKIHESLVGRKRVFELYPISFKEFVNFKTNYRYEESLEEFFEVEKVKTESLLNEYLNFGGYPRVVLEEKLSEKVRIIDEIYRSYLDKDVSYLIKSEKVDVYSSLIKLLAGQIGRLINYSELSSTLGISLQTLKNYLWYAEKTFIIHRLTPYFRNVRKEITKSPVIYFYDLGLRNYALGFFGKVEFSPDIGFLFKNFVFNIIKEKFRFTGASVHFWRTKDKAEVDFVINFGKEVIPIEAKYKKLKEPTVERSLRSFIEKYHPKEAWVINLALEYEVKIDKTIVKFLPFYRLLM
>NC_015682.1|WP_013909140.1|324924_325077_+|DUF2281-domain-containing-protein
MQERKRLEDIIKELPEDLRKELEDFARFLCVFSNFTDKFTSVELQHKIFQ
>NC_015682.1|WP_144011509.1|325356_325437_+|DUF2283-domain-containing-protein
MRITYDPKYDLLYIKLGKAKKFFVKR
>NC_015682.1|WP_081460660.1|325445_325592_+|DUF2283-domain-containing-protein
MTFDVDESGKLIGIEILSASEHIDFKFLFPVEITKETLKKRRQIDKKK
>NC_015682.1|WP_013909141.1|325753_325954_+|hypothetical-protein
MSILIIKKEMKIDDKILTIELPEEFKGQEVEITIRLKESIEKEILADQIKVDTTKWKFNREEMYAR

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Crispr_ID: NC_015682_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015682_2

1115343-1118449

TypeIII

Consensus_repeat	Method
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	PILER-CR
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	CRISPRCasFinder
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CRT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	PILER-CR
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	PILER-CR

41 spacers

cas2,cas1,csx1,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11

The CRISPR arrays of NC_015682_2

>merge|NC_015682|2|1115343-1118449|PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATTGCTCTATCCTCTCAAACTCAACTACTCTAAATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAGATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTAACATCTGCAAAATTTATAGGAATGTTAATGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACACGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTAACATCTGCAAAATTTATAGGAATGTTAATGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACACGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAATGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACACGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACAATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCAGTTGAAACCTGCCCTGGATCAAAAGGGATTGCGACGTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATCGTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC

>NC_015682|2|1|1115343-1116135|PILER-CR
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATTGCTCTATCCTCTCAAACTCAACTACTCTAAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AGATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	AATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCA
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC	GTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATC


>NC_015682|2|1|1115343-1118449|CRISPRCasFinder
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATTGCTCTATCCTCTCAAACTCAACTACTCTAAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	GATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	TTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	GCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	TTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	GCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	TTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	AATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCA
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC	GTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATC
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC

>NC_015682|2|2|1115343-1118448|CRT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATTGCTCTATCCTCTCAAACTCAACTACTCTAAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AGATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CAATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCA
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGA	CGTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATC
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGA

>NC_015682|2|2|1116401-1117768|PILER-CR
	TTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATTGCTCTATCCTCTCAAACTCAACTACTCTAAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AGATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	AATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCA
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC	GTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATC


>NC_015682|2|3|1117808-1118449|PILER-CR
	TTACAAAAATAAAATTTTTCATGTGGACAGGTCCATTCAAGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AATTGATCATAAAGTATTCTTTCAATTGTCTCTTTCAAATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TTTCGTTGAACTTCTTTATCTTACTCGCACACTCTTTTTCACAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACCTCTTTGTAAATCATTTTAACCCTCCCTTTTTTTATT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TCTTCCGGTTTTGGTTTGTGCCATACTGGGAATTCAAATACGA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ACAGGACATTTTTCTAACATAACCTTACCTCCTTTTTAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	AAATTGCTCTATCCTCTCAAACTCAACTACTCTAAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	ATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAA	TGTGGTAATTTTTTTTATCATGGCTTACACCTCTTTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAAAGAGAGGAGTGGAGGATTTATTCAATTTTGATGGTAATTTCGGGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAAATACAAACCTCTTTACCCTCAGCACAAAGCTCTTCATATGTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAATCTTTTTTTTCTGGCATAATAACCCTCCTTTATATTTTGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AATAAGATCCCTGTCTTCTCCTATGATAATGAATTTTTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATATACAAAAGCCACTTTCCTTATAATAAGGACAATTTTTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAATGATTTAATTAAATGTTGATAGTTCAACCAAAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTGACACCTCCGTAAACTTTCGTATCGGCTGTATAATAGAA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AGATCTAAATCTACCTCCCCTTCCCTTTTCTCTTTCAAATGG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTTTTCATTTTTGTCCTCCTCCTTTTGATTTTTTATTTTTAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CCCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTAACATCTGCAAAATTTATAGGAATGTTAATG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	ATTTGCCATTTCCTTTCTCATAAGTCTCACCTCCTTATTT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	AAAGTTGCTACTTTTTCAATCATAGTTTTCCCCCTTTTTAGTG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGA	CGCAGACTTTATGACATCAGAAAGTCTAATCTGAGAAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGACTTCTGTCCAGCCCAGCCCTAATAATTTGATATTGATTAGTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACTTTTATTTACTTTTCCTCCGATTTCGTTCCAAATATTAAT
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	CCTAAAAAATTGGGCAACTCTAAAAACTACTGAAAGAACAC
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ACCCAGAGAAAAGAATAATCAAACAATCTTATTAAAAATTA
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATTAAAGATACAGCCTTCATCACTCCATAACCTTCTATAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	AATATTTTCTACTTTTTCAATTTTGGTATCCCATACTTTAG
GTTGAAACCTGCCCTGGATTAAAAGGGATTGCGAC	ATATGTTTTTGCGGTGATTATTCCTTGACCTACTGATTTCA
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC	GTATAAATTTCTTTGCTTCTTCAAGTTGATAGTTTAAATC
GTTGAAACCTGCCCTGGATCAAAAGGGATTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015682.1\|WP_013909913.1\|1125791_1128503_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274618
NC_015682.1\|WP_013909902.1\|1112982_1113660_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_041430352.1\|1111606_1112977_+\|TIGR01897-family-CRISPR-associated-protein	csx1	cd09660_csx1_CAS-III	gnl\|CDD\|273862
NC_015682.1\|WP_013909903.1\|1113644_1113905_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_015682.1\|WP_013909911.1\|1123160_1124948_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NC_015682.1\|WP_013909900.1\|1110786_1111638_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|227838
NC_015682.1\|WP_013909906.1\|1118589_1118991_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|119400
NC_015682.1\|WP_013909899.1\|1109594_1110785_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|273863
NC_015682.1\|WP_013909915.1\|1129173_1129563_+\|class-III-cytochrome-C-family-protein	unknown	unknown	gnl\|CDD\|173979
NC_015682.1\|WP_049774820.1\|1107700_1108600_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NC_015682.1\|WP_013909907.1\|1119019_1119382_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|377602
NC_015682.1\|WP_013909896.1\|1107279_1107699_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	mkCas0187_csm2gr11_CAS-III-A	gnl\|CDD\|224339
NC_015682.1\|WP_013909898.1\|1108617_1109583_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl\|CDD\|273866
NC_015682.1\|WP_013909909.1\|1120562_1121282_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NC_015682.1\|WP_013909914.1\|1128504_1129137_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|184968
NC_015682.1\|WP_013909910.1\|1121296_1123090_-\|KUP/HAK/KT-family-potassium-transporter	unknown	unknown	gnl\|CDD\|376906
NC_015682.1\|WP_013909912.1\|1125055_1125607_+\|archaemetzincin-family-Zn-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|213029
NC_015682.1\|WP_013909908.1\|1119915_1120308_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NC_015682.1\|WP_013909904.1\|1113921_1114797_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NC_015682.1\|WP_013909905.1\|1114811_1115057_+\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256

Protein	Function_ID	Function_description	E-value
NC_015682.1\|WP_013909913.1\|1125791_1128503_+\|hypothetical-protein	gnl\|CDD\|274618	TIGR03508, decahem_SO, decaheme c-type cytochrome, DmsE family. Members of this family are small, decaheme c-type cytochromes, related DmsE of Shewanella oneidensis MR-1, which has been shown to be part of an anaerobic dimethyl sulfoxide reductase.	3.044e-08
NC_015682.1\|WP_041430352.1\|1111606_1112977_+\|TIGR01897-family-CRISPR-associated-protein	gnl\|CDD\|273862	TIGR01897, hypothetical_protein, CRISPR-associated protein, MJ1666 family. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model describes a Cas protein about 400 residues in length, found mostly in the Archaea but also in Aquifex.	1.06694e-34
NC_015682.1\|WP_013909903.1\|1113644_1113905_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.60658e-17
NC_015682.1\|WP_013909911.1\|1123160_1124948_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.20538e-53
NC_015682.1\|WP_013909900.1\|1110786_1111638_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	1.07165e-10
NC_015682.1\|WP_013909906.1\|1118589_1118991_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|119400	cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC).	1.64092e-20
NC_015682.1\|WP_013909899.1\|1109594_1110785_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|273863	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm5, for CRISPR/cas Subtype Mtube, protein 5.	1.48075e-17
NC_015682.1\|WP_013909915.1\|1129173_1129563_+\|class-III-cytochrome-C-family-protein	gnl\|CDD\|173979	cd08168, Cytochrom_C3, Heme-binding domain of the class III cytochrome C family and related proteins. This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm).	1.26784e-20
NC_015682.1\|WP_049774820.1\|1107700_1108600_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	8.79882e-73
NC_015682.1\|WP_013909907.1\|1119019_1119382_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|377602	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like. GGACT, gamma-glutamylamine cyclotransferase, is a ubiquitous enzyme found in bacteria, plants, and metazoans from Dictyostelium through to humans. It converts gamma-glutamylamines to free amines and 5-oxoproline.	3.64058e-32
NC_015682.1\|WP_013909896.1\|1107279_1107699_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|224339	COG1421, COG1421, CRISPR system related protein [Defense mechanisms].	4.90033e-05
NC_015682.1\|WP_013909898.1\|1108617_1109583_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|273866	TIGR01903, Hypothetical_protein., CRISPR type III-A/MTUBE-associated RAMP protein Csm4. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. Members of this cas gene family are found in the mtube subtype of CRISPR/cas locus and designated Csm4, for CRISPR/cas Subtype Mtube, protein 4.	1.76387e-18
NC_015682.1\|WP_013909909.1\|1120562_1121282_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	9.50793e-90
NC_015682.1\|WP_013909914.1\|1128504_1129137_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	7.26616e-35
NC_015682.1\|WP_013909910.1\|1121296_1123090_-\|KUP/HAK/KT-family-potassium-transporter	gnl\|CDD\|376906	pfam02705, K_trans, K+ potassium transporter. This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP), yeast (HAK), and plant (AtKT) sequences as members.	0
NC_015682.1\|WP_013909912.1\|1125055_1125607_+\|archaemetzincin-family-Zn-dependent-metalloprotease	gnl\|CDD\|213029	cd11375, Peptidase_M54, Peptidase family M54, also called archaemetzincins or archaelysins. Peptidase M54 (archaemetzincin or archaelysin) is a zinc-dependent aminopeptidase that contains the consensus zinc-binding sequence HEXXHXXGXXH/D and a conserved Met residue at the active site, and is thus classified as a metzincin. Archaemetzincins, first identified in archaea, are also found in bacteria and eukaryotes, including two human members, archaemetzincin-1 and -2 (AMZ1 and AMZ2). AMZ1 is mainly found in the liver and heart while AMZ2 is primarily expressed in testis and heart; both have been reported to degrade synthetic substrates and peptides. The Peptidase M54 family contains an extended metzincin concensus sequence of HEXXHXXGX3CX4CXMX17CXXC such that a second zinc ion is bound to four cysteines, thus resembling a zinc finger. Phylogenetic analysis of this family reveals a complex evolutionary process involving a series of lateral gene transfer, gene loss and genetic duplication events.	3.73896e-66
NC_015682.1\|WP_013909908.1\|1119915_1120308_+\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	5.42372e-17
NC_015682.1\|WP_013909904.1\|1113921_1114797_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	6.42658e-66
NC_015682.1\|WP_013909905.1\|1114811_1115057_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.77866e-06

>NC_015682.1|WP_013909905.1|1114811_1115057_+|CRISPR-associated-endonuclease-Cas2
MRVIVYDYETEKIREKVRKNLKKLGVHAQWSVFESLESYENLIKVLLEEEGEKYRVAIFKINPKGEIRKIGQNWEKIKFIF
>NC_015682.1|WP_013909904.1|1113921_1114797_+|CRISPR-associated-endonuclease-Cas1
MKQTIIIYSNYVEVSRKGGRLYIETPKTKCSIPLSNIDGILIFGKSYLTSEAISLCMKKQIPIILFTIYGKIKGQILPPANSETTNKRIKQFGLYFFKRFEIAKYLIKRKYNEIERTFNVELWELKPKIDEVTDYTSLLGIEGIATKVMFQKFESMIKDTEFKFWDRNYRPPKDEVNALLSFIYTLGYNLATGIIVLKGFDPFISFLHFKRGKHAAFASDLMEIIRPKLTLFSAELITKNKIIKEDFVKENNYFYLKKQAIYKILEEFNQLKEELITSMKKFLTDLENFDF
>NC_015682.1|WP_013909903.1|1113644_1113905_+|CRISPR-associated-endonuclease-Cas2
MDYLIVYDISDHKKRLKVSRLLQKFGYRIQYSAFYLPETKGNIIDFLFKEISKLIDKNTDRVFFYPVHPPEVFKGYPLEPWKIFII
>NC_015682.1|WP_013909902.1|1112982_1113660_+|hypothetical-protein
MYGRILIYYGQKVTFSEDIASIISFKSGFENIGLPLIRLFPSKDYSRIYLNFKEPIIPVKNLFVKFLRERRKWLEEFQNTAYLALKYRDHKLYGKSFNEPIPYRLLVKEVSTIIKAYYRYYSIACAILTALFFTNVGLPKFLPKVVEEVYGQDFLDDFFFAPAFIFTVFESTADLLLGEALKDEFCIAKSFLSFLLWKHAKALLKIPYFKLIHVGVKKELIWITL
>NC_015682.1|WP_041430352.1|1111606_1112977_+|TIGR01897-family-CRISPR-associated-protein
MMLIYQIGRLDSGAFNPIKFEVNGKEYTAQLSSFALRQSFLENGEASKVILIYPVSLFLNKSLSNKNNPQTQNIPIDFKKVIESILYNKAERFNYLSNPYPYFAKHPHSKEADEFIVIHSIGQYEGINFSATLEELILEIFIDMVKRYQDEPFSELYLDISSGHNIYTSALLEAGRLFLTFYKLQNFLTKGKELNVFITFSDPILPPYERTFKIHKGFLLEVKVFFSYPEKPYEYSLRQGYMKFAGELAKENREIKRDLNDLFSYGKFFYSAIKNNIPLVLYTQAYHSEERINEGLQILIKLVKDSLTQNYQNTPKLNFDLFRKAFLMLAIYKGITEVLKTYKIAKKEEVSISELREKFVEENKSLYKYFGLVQNRNYLSQEIKNNFDRNKDKFEKEYKLLREYIGGESEDFNPRNFFAHCGFERNSIYVRKDGEEILVKYREDRLEEIAKILMEY
>NC_015682.1|WP_013909900.1|1110786_1111638_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MPVRFSIDLNLQSKVENPSLITPDVLHGFFFSLLPSNIAETLHRPSRYKPFCLWAPKIFKFLQDKETFHDFSNSILTITVSFLKDELFSPFLFKLTENRKNLFLGPYKVSLLQNPGSLIKNDEYSTFENFLNIQPKTYMYFYAITPISFKKGQIDYPLPDPKIFFKSLINKWNYFSPFRIEVDLRKVLEEKLCIVYSKIRTYKIKLSLGSAVTGFKGKVVFYGKGLIDEELRWLNILGHFSRYAGVGRKTTMGLGMVEFQALNIDEITAEEGIDDANLPNWSA
>NC_015682.1|WP_013909899.1|1109594_1110785_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MELITLSPLHIGDGEELIPFEYIEEDNKVKIYPFDYFIDKLYETYKEPKDLLPKLIELKETAKNGLKENLKDYFKKVKISISPKYEITTKVGIPAENNIKTFIKNLEGPYIPGSEIKGALRTVFLYGILKKDIKRKSQFLNQLEKIKPEIEKLANVYDEREKKEEKRKVLESISKLIENLEREIFRANQEDAQYDLFKAITVSDSFSISYNDLYIDAIRVLNSSRDLRSYSEILKGGLRIKLDGFIDEKIALEGLKKLTIFNEKFKNQNIEKVTWQFLKESAIDFYSSLIEKEKNYVKNKVKDQELKNSLLKQLEKLEVYIREAKNSSKIIIPLRIGQHQGYLSITIMQLVKEERPDLFDDIFKVSAPQVRCELNKTRRVVESEGKFLGWCFLYIE
>NC_015682.1|WP_013909898.1|1108617_1109583_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MKLYEFTFKGLSYFTSEIKSYTIFGALCWGYRNFFGEKKLLDLLECFNSNPPFLISSCIFKKGNIRYFPCPQIEEAFPEPKDIEEYKKQKEIKKKLNYIPEDIFIEFLEGKIKTKWKLGQKIEECKGFETISIHRTIKLHNSINRLTWTTVGGQLYNVFSYFYPEFSFFICLFDENLLDEIKAVFKYISFGGNKSTGYGRVKLIKVDRVEKFEKYLNQFTQKFYTLSSTLPDSSFDYDNSYYQIEIFCGKVENFYDRLVAPILKRKVLYLQPGSILTIKDGNKKNFYGNLINVLSSRSLIDPSKEVKIYQYGYAFPFYIKE
>NC_015682.1|WP_049774820.1|1107700_1108600_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYSERTLKRGGENMFNYKGSFIIEYTLKALTGLRIGGSKEQFEIGGLDNPVIKVEVEIPDYDGNGNTLPQGAPYIPGSSLKGKMRSLLEWLNGNVEKMIKKVKDDKNIKDEKKVDKAGGACTCGECEICKIFGTGDAERVKELAEKGIDFIPGPPRLRVFDAYPTYETLKRLKDALGENIFTEIKTENQINRLTSKSNPRKVERVPAGAEFKGTMVFDVYKDEDKDLLKVVFQGMKCLEDHYLGGYGSRGSGKVKFKDITLIWRPKEYYLGEEEKERKLFENNQLNEILKNLSEKLNTL
>NC_015682.1|WP_013909896.1|1107279_1107699_+|type-III-A-CRISPR-associated-protein-Csm2
MSNGQNRDQITKKLTDEIKKKSGLCYFSLYELLKPNGYAQQVVKENELTRVQLRKVFSEFKYVYDEYKKNKNKEKAKIHLYKLYPLLQYQVNRRLIKENFKNLIWAILDTLVGNDEKFDENLEFSYEFLKALVAYIPRE
>NC_015682.1|WP_013909906.1|1118589_1118991_-|gamma-glutamylcyclotransferase
MVYYFAYGSNMSLEQMKERCGNLWKKIGIGYVEGYELVFDGYSSTRGGPTANMVENPNERVWGVVFKFNSFDDLINCLDKYEGYPFSYTRKEFGVFLPEMGKKNKSYSLCETRTKGKRETTEILYRNHSQRSH
>NC_015682.1|WP_013909907.1|1119019_1119382_-|gamma-glutamylcyclotransferase
MPKLFVYGTLRKGECRHSTLADCKFLGYAKAKGFLLYNVSSFPGMVQGEGEVIGEVYEIPESLLERLDLIEGVPELFKRELIEVVLEDGTIISVYAYLYNKGVDNKLLIPSGNWKDVNKI
>NC_015682.1|WP_013909908.1|1119915_1120308_+|DUF202-domain-containing-protein
MEEEKIHPKVRNRRVHLANERTFLSWIRTSIGIMAFGFVVERFALFVRQLSVFLGKEIPLTPHHGYSSFFGAFLIALGAVMGFLAFIRYKSIEKQIDEDTYKPSILLDILLVISLLVIAIFLIIYILYSI
>NC_015682.1|WP_013909909.1|1120562_1121282_+|rRNA-pseudouridine-synthase
MRLDKFLSDLGIASRRKIVHLIKSGKVKINGKKVTNCGIKVNPDLDLIEVEGILVTALPKKHYYKFYKPKGYITSKADKAPTVMDLLPSDLPGLKKIFPVGRLDKDAEGLLIFTDDGLLAHRIMHPKWKLTKTYYVQIDKEITEKDLEKLEEGIELSDGRTLPCKISILDLTRKFLQVKVKEGRYHLIKRMFGKLGYKVLELKRIAIGPIKLGDLKPSQIIPLSSEEIRLLKEAVGLKD
>NC_015682.1|WP_013909910.1|1121296_1123090_-|KUP/HAK/KT-family-potassium-transporter
MLRIIKAIGLVFGDIGTSPIYTLTVVFLLLPPTKENVFGVLSIIFWTLIIIPTLQYTVLAMSLSLRGEGGTLILFEILRGLLTSKRAISVVTLLSFLGTSLLMGDGVITPAISILSAVEGISYIPGFRPLTEMEIVFISILITLGLFIFQSRGTETVSGTFGPIMSLWFSSLFLLGFINIIKMPEILKAISPHYIFQFFKINGWKAYLVLGETILCVTGAEAMYADMGHLGAKPIKQAWKLVFLALVTNYFGQGAYLLLNPETKSVLFEMCLGTLSFFYIPFLIIALLATIIASQAMISGMFSIIYQAITARILPIFKVKYTSVELPSQIYIPTVNWLLLLAVSFIMYEFKSSSSLAGAYGLAVAGNMTITGIFLIIIFYLKRHFSFMSIAIFTAIITFIYFTSTLFKFPHGGYWAVALASFPFSIILLYTNGQKRLYRFTNFLSKEEFINKFERFYATNPKIPGTALFLIRDPSVFPPYVIETLFFHGIIYEENIFLSLIRKNEPYGITTSFLQPLCNGAKVFEIAYGYMEILRVEEILRENGIEERVIFYGLEEIQTSSPLWKIYAFIKQISPHFVKFLDLPPTKLHGVLTRLSM
>NC_015682.1|WP_013909911.1|1123160_1124948_-|diguanylate-cyclase
MSLKKFFLLLSTFIFSFLLISYLFIFKFLESNFLSLEKENSKNRVNKIENYFQKEMTKLHNLTKDWAAWDDAYLFMENKNFKKFIKANLTPSTYLNLKIDLLLYTYLNGKIKAGGLFNKKSGKIYLNRELLNLIKENLKNLSNKNLYDYKKLVLFMDKPFIISIYPVLKSNYTGPPKGYLFMGRFLTSEDINTLANFFDVKDLQIFKSDKPSPEINFIKADFNEIILEKNHFLNDKNLKVKVSFFVEKPYIKSIIPFIGITQISLFLIFAIIMSFLIDKYILKPLLKLLSEIKEVENKEKTRLSLDYPTKEYKNLASVINEFLENISVRENIYKAVAEKTENLILLFNGEKNIIFKNANVDLYFDSEELKYLIEKISEELKNIELFEGKLEIKNFNIKNYWFNFQIIEVFKNLYLLIGQNITEAKLKEEKLFKMATQDFLTGLYNRRYLEDALERIMAASKRGEKFVLLFIDCDDLKKINDTYGHLIGDKVLKVVAQAIKDSIRKEDLGCRWGGDEFVVILNHCDKNLGIKIAERIINKLENSEIKLNSVKIKPSVSIGIVEIDGTKEIKEVLDLADKFAYRAKLNGKPKIIYEI
>NC_015682.1|WP_013909912.1|1125055_1125607_+|archaemetzincin-family-Zn-dependent-metalloprotease
MNKISIKFIFCALKDEHLEKLKEHLEKTYFSELDIAYLPLDISKAYNFKRNQYLADIIIGEARKLKKDPKEKWLLVVDVDLYASGLNFIFGQADLRSGIGIISLTRLKPEFYGQKPNEKLFLERVLKEATHELGHLFYLIHCENPKCVMAFSNSILDTDRKEKALCIGCKNILKVYTRLRFQK
>NC_015682.1|WP_013909913.1|1125791_1128503_+|hypothetical-protein
MKLNNKIFYIFGIVVFLFIFTSFYIFSENLTFAKSENNCLKCHSVKRLPKVLPNGEKMDLYIDKTGFLNSVHGSLSCTDCHSDINLATHPRPMKISSKLEYAKKVSQSCANCHPEDGLSPIHKNILKEGKISCIECHGSHYIKPMKELAKDADKCLDCHSVEDLSKDLPSGEKMYLYVNKEKFLNSVHGKIGCLFCHKDVDPSNHPQPVEISSKQEYAKKIFKNCLNCHPLNTLSPIHKGFLKEDRMVCFGCHGNHYVKSKAQWKKETDKCLRCHSVRRLPKVLPNGEQMDLYVDKEAFKKTVHGDVGCWVCHQGIDFSNHPRPIRIESKKAYAKKITAGCFRCHPKDVLSKHKGHAKLIEEEKILCIDCHGHHKNQPFREWKEKAKYQEYCMSCHKLDLFKTLPNKEKISLKVDLTQLKESVHKNFECIVCHKDFSKKAHPSYNFKTRKEYSINLSRSICQTCHTDEELKKNPAHYAIAKTASCIDCHGYHNVKSLKVPAGVPENKYCMNCHSLSLVKKMENGEILSVKVDEKQILASAHKDLKCSQCHIGFSTKTHPIRSFKSIADYRSKAQEICANCHKNETLEYNNSIHAKAILKGNREAPDCLKCHGYHNVAKITSNLALRYETCIRCHDKEDKSFKESIHYKAYEEGKKDAPVCSSCHNAHKVLPTNIAKLNEACIKCHKDVKKSHNKWLYNPPFKLESFVDVHFAGSTCTTCHISGEKAIVLTLITSENKPLTLEEISKLTNWSVEEIKSKLDSNKDNIIQKEELYQFLKNFKDKEKVQFKGRLDVVNGNDAHKILTKQGAVKDCAFCHNPEAQFVGKLEFNKEGEKPEKFNLEKNVVNSVYAIPNIKDFYVLGLTKINILDILFVIALIAGAGVAGGHIFLRLITTPIRRKRRGG
>NC_015682.1|WP_013909914.1|1128504_1129137_+|cytochrome-b/b6-domain-containing-protein
MKKIYLHPLPVRIWHWINAISFIILIITGLQIRLGDKMTFMSFQTAVKIHSWLGFILIANYLIWFVYYFATLKFFKIYLPPFWKPIEFIKRALRQAKYYGYGIMVGDKNPHHPTPENKFNPLQQVAYFFIMIICIPLQLLTGLVLWDPVKFKFLANILGGIQIVSLIHVGLWIFFSAFIIIHFYLATLGHTFWAHFIAMITGYEEEPEEH
>NC_015682.1|WP_013909915.1|1129173_1129563_+|class-III-cytochrome-C-family-protein
MKVKKLLIGIISGSFMLGGTVLLAQQATPPTEVEIIVEGAKMAGVKFSHEKHTKDYKVDCKVCHHKEEDPTKGALKCSVCHGLTGGTEKAPNAPKNMLAYHKNCIDCHQKVNAEQGKAAPTKCNECHKK

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Crispr_ID: NC_015682_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015682_3

1221572-1225128

Unclear

Consensus_repeat	Method
GTTTCAATCCACCAAAGAGGAATTTAAAC	PILER-CR
GTTTCAATCCACCAAAGAGGAATTTAAAC	CRISPRCasFinder
GTTTCAATCCACCAAAGAGGAATTTAAAC	CRT

54 spacers

cas2,cas1,cas4,cas3,cas5,cas6

The CRISPR arrays of NC_015682_3

>merge|NC_015682|3|1221572-1225128|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCACCAAAGAGGAATTTAAACACAAACAGGTCCTGCATAATAACTACTTTCAACCCAGTTTCAATCCACCAAAGAGGAATTTAAACTTTGATAGAAAACAAAACAAAAAAGAGGTAAATGGGTTTCAATCCACCAAAGAGGAATTTAAACGCAAAAAGGGTGAAGGTGATACCGAAAAGTAAAAGTGTTTCAATCCACCAAAGAGGAATTTAAACTTAAAACTTGAACCTTTAAAAGAACTTTCACAGGAAGTTTCAATCCACCAAAGAGGAATTTAAACATGTTTTTGGGGGACTGTGTTGTTATTTATGGATGAGTTTCAATCCACCAAAGAGGAATTTAAACCCACCTGCAAAAACAACACTTCCTACATCTCTAAAATCGTTTCAATCCACCAAAGAGGAATTTAAACTCTTCATTTTCAAGAACATATATAATAGGCATACTGTTTCAATCCACCAAAGAGGAATTTAAACCTGAAGATTTTTATAATAATACACCATTCTAAGCAAGTTTCAATCCACCAAAGAGGAATTTAAACGTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGCGTTTCAATCCACCAAAGAGGAATTTAAACCGTTGTTTTATCTGCAGGTGAGGAATTGAAGCTTGATACGTTTCAATCCACCAAAGAGGAATTTAAACATTATTTAATGACCCAGCATTTTTTATTCTATACCTTCGTTTCAATCCACCAAAGAGGAATTTAAACCTATTCCTTGCTCAAATTCAACCGTCTTACTTTCAGTGTTTCAATCCACCAAAGAGGAATTTAAACGATTTTGATATGGATTATTTTTGGACTTTTGTTGGGTTTCAATCCACCAAAGAGGAATTTAAACTTTATATCATCAACTATCCTTCCTACATCTCCTACCGTTTCAATCCACCAAAGAGGAATTTAAACTCTCCCTCATCTCCTGAAATACACCAAGCCCCAACCAGTTTCAATCCACCAAAGAGGAATTTAAACGCCTTAGATCTTCAACAAAATTCATTAATTGACTGGAGTTTCAATCCACCAAAGAGGAATTTAAACTTGTATTTGCTTATAAAATTTTTCAAATGAGGATATTTGTTTCAATCCACCAAAGAGGAATTTAAACCTCGTGAAATTTCTCACATTCTCACATCACCCATCCGTTTCAATCCACCAAAGAGGAATTTAAACAATAGATACAGAAACTATACGTTAATCATGAGAGACGTTTCAATCCACCAAAGAGGAATTTAAACAGACGTAGCCGCTATCATTCTTGCAGTATCTTCCGAAGTTTCAATCCACCAAAGAGGAATTTAAACTTTGCAGATTTTTGTAGTAATATATCATTCGAAGCAGTTTCAATCCACCAAAGAGGAATTTAAACACTTCTTCTCAACTTTCTGTTTCTATTGTTGATGCTGTTTCAATCCACCAAAGAGGAATTTAAACATCTCCTTTCTTTTTTTTCTTTTTTCTGTTCATGTGGTTTCAATCCACCAAAGAGGAATTTAAACATCTCACTCACACCTTCAAATCCTACGCCAAATAGGTTTCAATCCACCAAAGAGGAATTTAAACGTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGCGTTTCAATCCACCAAAGAGGAATTTAAACATCAAACGGCACAAATACCTCGTCCAAAATAAGCAAGTTTCAATCCACCAAAGAGGAATTTAAACAGGGCGTGGGATGTTATAAATGCTCTTTCGTATCTTGTTTCAATCCACCAAAGAGGAATTTAAACGTAGTGCAATTTTTTCTTGTTATATCTTCTTAACTCGTTTCAATCCACCAAAGAGGAATTTAAACGAAGGGGTTAAGAGTTATGATGAAGAGAAGAAATTTGTTTCAATCCACCAAAGAGGAATTTAAACGAGGAAGTAAAGAAAGAGTATAGGAGGAGGGCAAAGGTTTCAATCCACCAAAGAGGAATTTAAACTATAGTGCACAGCATTTTGAGGCGTTTGCGTATTATGGTTTCAATCCACCAAAGAGGAATTTAAACCCTGCCACTCAGGAGTTCTCACAATCGCCTCCTCCAGTTTCAATCCACCAAAGAGGAATTTAAACGTGGTTCTGTCTGTGTCTGTTCTTTTTTCTGTTCAAGTTTCAATCCACCAAAGAGGAATTTAAACCTCCAGTATCGTGGCATTTCAAAAAAACGATTTAAAGGTTTCAATCCACCAAAGAGGAATTTAAACAAATACTAGCTCCACTACCGGCTGAAGTTTGACATTGTTTCAATCCACCAAAGAGGAATTTAAACCTACTTCTAAATTAAACCAGACAGGAAACTGAACTGGTTTCAATCCACCAAAGAGGAATTTAAACTCAGGTAATCTCTTTTTCAAAAAGAAATGTAACCCCGTTTCAATCCACCAAAGAGGAATTTAAACCCGAGGAGATAAGTGAAAACGAACTAGCTCTTCTCACGTTTCAATCCACCAAAGAGGAATTTAAACAATGATTGCTTTAACAGAAAACGGGGATTTTGTTTTTGTTTCAATCCACCAAAGAGGAATTTAAACCTTCATAGCCTTCTTAAAATCAACCAAATTCTTGCCCCGTTTCAATCCACCAAAGAGGAATTTAAACTTCTTTTATATCATTTCTATTCCGTGCACTACTAACGTGTTTCAATCCACCAAAGAGGAATTTAAACATTTCCCCGAGTTATAGCAACTTTTAGAGACAAAAGTTTCAATCCACCAAAGAGGAATTTAAACATATATAGCAAAACATTCTAAAAACTCTTCTAAAAAGTTTCAATCCACCAAAGAGGAATTTAAACTACAATTTCCTTCTCTTATAAGGGAGAGAGTTCCACGTTTCAATCCACCAAAGAGGAATTTAAACCAAGACTTTTTGCCTCTTTTTACTCCGCTTTCAGTTCGTTTCAATCCACCAAAGAGGAATTTAAACTTAACCAGACCTCAAAAAATCTTGTAAACATAGATTGTTTCAATCCACCAAAGAGGAATTTAAACCTTATACAACTTCCATCCTTTATCTCTTACCTCCACTGTTTCAATCCACCAAAGAGGAATTTAAACTTCTTAGAAGAGTGGATAAGGAGTGATGGGTGTATTGTTTCAATCCACCAAAGAGGAATTTAAACTCTATTTTCATTTGTCAATTTTTTGACTGTGTTTTTGTTTCAATCCACCAAAGAGGAATTTAAACATCTACATCTACTTCTATCACCTTACCCTCAGCTACGTTTCAATCCACCAAAGAGGAATTTAAACTTTTTTTCAGAGTAAGCACACCAGTGAGAATTAAAAGTTTCAATCCACCAAAGAGGAATTTAAACACTTTAGAGTTTGCTTTAGCTAGCTAATAGTTAATTTGTTTCAATCCACCAAAGAGGAATTTAAACAGTGATCACAATATTAGAAGAAGAGTCATAATAAGTGTTTCAATCCACCAAAGAGGAATTTAAACGTGTTAAAACTTTTTAGGTTCAGCTATTCAAGAAGGTTTCAATCTACCAAAGAGGAAATTTAAA

>NC_015682|3|4|1221572-1225064|PILER-CR
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACAAACAGGTCCTGCATAATAACTACTTTCAACCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGATAGAAAACAAAACAAAAAAGAGGTAAATGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCAAAAAGGGTGAAGGTGATACCGAAAAGTAAAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAAAACTTGAACCTTTAAAAGAACTTTCACAGGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATGTTTTTGGGGGACTGTGTTGTTATTTATGGATGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCACCTGCAAAAACAACACTTCCTACATCTCTAAAATC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTTCATTTTCAAGAACATATATAATAGGCATACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTGAAGATTTTTATAATAATACACCATTCTAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CGTTGTTTTATCTGCAGGTGAGGAATTGAAGCTTGATAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTATTTAATGACCCAGCATTTTTTATTCTATACCTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTATTCCTTGCTCAAATTCAACCGTCTTACTTTCAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GATTTTGATATGGATTATTTTTGGACTTTTGTTGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTATATCATCAACTATCCTTCCTACATCTCCTACC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTCCCTCATCTCCTGAAATACACCAAGCCCCAACCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCCTTAGATCTTCAACAAAATTCATTAATTGACTGGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTGTATTTGCTTATAAAATTTTTCAAATGAGGATATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCGTGAAATTTCTCACATTCTCACATCACCCATCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATAGATACAGAAACTATACGTTAATCATGAGAGAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGACGTAGCCGCTATCATTCTTGCAGTATCTTCCGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGCAGATTTTTGTAGTAATATATCATTCGAAGCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTCTTCTCAACTTTCTGTTTCTATTGTTGATGCT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCCTTTCTTTTTTTTCTTTTTTCTGTTCATGTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCACTCACACCTTCAAATCCTACGCCAAATAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCAAACGGCACAAATACCTCGTCCAAAATAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGGGCGTGGGATGTTATAAATGCTCTTTCGTATCTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTAGTGCAATTTTTTCTTGTTATATCTTCTTAACTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAAGGGGTTAAGAGTTATGATGAAGAGAAGAAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAGGAAGTAAAGAAAGAGTATAGGAGGAGGGCAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TATAGTGCACAGCATTTTGAGGCGTTTGCGTATTATG
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCTGCCACTCAGGAGTTCTCACAATCGCCTCCTCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGGTTCTGTCTGTGTCTGTTCTTTTTTCTGTTCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCCAGTATCGTGGCATTTCAAAAAAACGATTTAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	AAATACTAGCTCCACTACCGGCTGAAGTTTGACATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTACTTCTAAATTAAACCAGACAGGAAACTGAACTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCAGGTAATCTCTTTTTCAAAAAGAAATGTAACCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCGAGGAGATAAGTGAAAACGAACTAGCTCTTCTCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATGATTGCTTTAACAGAAAACGGGGATTTTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTCATAGCCTTCTTAAAATCAACCAAATTCTTGCCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTTTATATCATTTCTATTCCGTGCACTACTAACGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTTCCCCGAGTTATAGCAACTTTTAGAGACAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATATATAGCAAAACATTCTAAAAACTCTTCTAAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TACAATTTCCTTCTCTTATAAGGGAGAGAGTTCCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CAAGACTTTTTGCCTCTTTTTACTCCGCTTTCAGTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAACCAGACCTCAAAAAATCTTGTAAACATAGATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTATACAACTTCCATCCTTTATCTCTTACCTCCACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTAGAAGAGTGGATAAGGAGTGATGGGTGTATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTATTTTCATTTGTCAATTTTTTGACTGTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTACATCTACTTCTATCACCTTACCCTCAGCTAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTTTTTCAGAGTAAGCACACCAGTGAGAATTAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTTAGAGTTTGCTTTAGCTAGCTAATAGTTAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGTGATCACAATATTAGAAGAAGAGTCATAATAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC

>NC_015682|3|2|1221572-1225128|CRISPRCasFinder
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACAAACAGGTCCTGCATAATAACTACTTTCAACCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGATAGAAAACAAAACAAAAAAGAGGTAAATGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCAAAAAGGGTGAAGGTGATACCGAAAAGTAAAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAAAACTTGAACCTTTAAAAGAACTTTCACAGGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATGTTTTTGGGGGACTGTGTTGTTATTTATGGATGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCACCTGCAAAAACAACACTTCCTACATCTCTAAAATC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTTCATTTTCAAGAACATATATAATAGGCATACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTGAAGATTTTTATAATAATACACCATTCTAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CGTTGTTTTATCTGCAGGTGAGGAATTGAAGCTTGATAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTATTTAATGACCCAGCATTTTTTATTCTATACCTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTATTCCTTGCTCAAATTCAACCGTCTTACTTTCAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GATTTTGATATGGATTATTTTTGGACTTTTGTTGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTATATCATCAACTATCCTTCCTACATCTCCTACC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTCCCTCATCTCCTGAAATACACCAAGCCCCAACCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCCTTAGATCTTCAACAAAATTCATTAATTGACTGGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTGTATTTGCTTATAAAATTTTTCAAATGAGGATATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCGTGAAATTTCTCACATTCTCACATCACCCATCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATAGATACAGAAACTATACGTTAATCATGAGAGAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGACGTAGCCGCTATCATTCTTGCAGTATCTTCCGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGCAGATTTTTGTAGTAATATATCATTCGAAGCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTCTTCTCAACTTTCTGTTTCTATTGTTGATGCT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCCTTTCTTTTTTTTCTTTTTTCTGTTCATGTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCACTCACACCTTCAAATCCTACGCCAAATAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCAAACGGCACAAATACCTCGTCCAAAATAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGGGCGTGGGATGTTATAAATGCTCTTTCGTATCTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTAGTGCAATTTTTTCTTGTTATATCTTCTTAACTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAAGGGGTTAAGAGTTATGATGAAGAGAAGAAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAGGAAGTAAAGAAAGAGTATAGGAGGAGGGCAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TATAGTGCACAGCATTTTGAGGCGTTTGCGTATTATG
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCTGCCACTCAGGAGTTCTCACAATCGCCTCCTCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGGTTCTGTCTGTGTCTGTTCTTTTTTCTGTTCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCCAGTATCGTGGCATTTCAAAAAAACGATTTAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	AAATACTAGCTCCACTACCGGCTGAAGTTTGACATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTACTTCTAAATTAAACCAGACAGGAAACTGAACTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCAGGTAATCTCTTTTTCAAAAAGAAATGTAACCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCGAGGAGATAAGTGAAAACGAACTAGCTCTTCTCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATGATTGCTTTAACAGAAAACGGGGATTTTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTCATAGCCTTCTTAAAATCAACCAAATTCTTGCCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTTTATATCATTTCTATTCCGTGCACTACTAACGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTTCCCCGAGTTATAGCAACTTTTAGAGACAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATATATAGCAAAACATTCTAAAAACTCTTCTAAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TACAATTTCCTTCTCTTATAAGGGAGAGAGTTCCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CAAGACTTTTTGCCTCTTTTTACTCCGCTTTCAGTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAACCAGACCTCAAAAAATCTTGTAAACATAGATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTATACAACTTCCATCCTTTATCTCTTACCTCCACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTAGAAGAGTGGATAAGGAGTGATGGGTGTATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTATTTTCATTTGTCAATTTTTTGACTGTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTACATCTACTTCTATCACCTTACCCTCAGCTAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTTTTTCAGAGTAAGCACACCAGTGAGAATTAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTTAGAGTTTGCTTTAGCTAGCTAATAGTTAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGTGATCACAATATTAGAAGAAGAGTCATAATAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGTTAAAACTTTTTAGGTTCAGCTATTCAAGAAG
GTTTCAATCTACCAAAGAGGAAATTTAAA

>NC_015682|3|3|1221572-1225128|CRT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACAAACAGGTCCTGCATAATAACTACTTTCAACCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGATAGAAAACAAAACAAAAAAGAGGTAAATGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCAAAAAGGGTGAAGGTGATACCGAAAAGTAAAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAAAACTTGAACCTTTAAAAGAACTTTCACAGGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATGTTTTTGGGGGACTGTGTTGTTATTTATGGATGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCACCTGCAAAAACAACACTTCCTACATCTCTAAAATC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTTCATTTTCAAGAACATATATAATAGGCATACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTGAAGATTTTTATAATAATACACCATTCTAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CGTTGTTTTATCTGCAGGTGAGGAATTGAAGCTTGATAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTATTTAATGACCCAGCATTTTTTATTCTATACCTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTATTCCTTGCTCAAATTCAACCGTCTTACTTTCAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GATTTTGATATGGATTATTTTTGGACTTTTGTTGG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTATATCATCAACTATCCTTCCTACATCTCCTACC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTCCCTCATCTCCTGAAATACACCAAGCCCCAACCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GCCTTAGATCTTCAACAAAATTCATTAATTGACTGGA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTGTATTTGCTTATAAAATTTTTCAAATGAGGATATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCGTGAAATTTCTCACATTCTCACATCACCCATCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATAGATACAGAAACTATACGTTAATCATGAGAGAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGACGTAGCCGCTATCATTCTTGCAGTATCTTCCGAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTGCAGATTTTTGTAGTAATATATCATTCGAAGCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTCTTCTCAACTTTCTGTTTCTATTGTTGATGCT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCCTTTCTTTTTTTTCTTTTTTCTGTTCATGTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTCACTCACACCTTCAAATCCTACGCCAAATAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGCTGGCAGTTCTAATGTATATGTGAATGGGAGGC
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCAAACGGCACAAATACCTCGTCCAAAATAAGCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGGGCGTGGGATGTTATAAATGCTCTTTCGTATCTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTAGTGCAATTTTTTCTTGTTATATCTTCTTAACTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAAGGGGTTAAGAGTTATGATGAAGAGAAGAAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GAGGAAGTAAAGAAAGAGTATAGGAGGAGGGCAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TATAGTGCACAGCATTTTGAGGCGTTTGCGTATTATG
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCTGCCACTCAGGAGTTCTCACAATCGCCTCCTCCA
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGGTTCTGTCTGTGTCTGTTCTTTTTTCTGTTCAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTCCAGTATCGTGGCATTTCAAAAAAACGATTTAAAG
GTTTCAATCCACCAAAGAGGAATTTAAAC	AAATACTAGCTCCACTACCGGCTGAAGTTTGACATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTACTTCTAAATTAAACCAGACAGGAAACTGAACTG
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCAGGTAATCTCTTTTTCAAAAAGAAATGTAACCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CCGAGGAGATAAGTGAAAACGAACTAGCTCTTCTCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	AATGATTGCTTTAACAGAAAACGGGGATTTTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTCATAGCCTTCTTAAAATCAACCAAATTCTTGCCCC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTTTATATCATTTCTATTCCGTGCACTACTAACGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATTTCCCCGAGTTATAGCAACTTTTAGAGACAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATATATAGCAAAACATTCTAAAAACTCTTCTAAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	TACAATTTCCTTCTCTTATAAGGGAGAGAGTTCCAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	CAAGACTTTTTGCCTCTTTTTACTCCGCTTTCAGTTC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTAACCAGACCTCAAAAAATCTTGTAAACATAGATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	CTTATACAACTTCCATCCTTTATCTCTTACCTCCACT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTCTTAGAAGAGTGGATAAGGAGTGATGGGTGTATT
GTTTCAATCCACCAAAGAGGAATTTAAAC	TCTATTTTCATTTGTCAATTTTTTGACTGTGTTTTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	ATCTACATCTACTTCTATCACCTTACCCTCAGCTAC
GTTTCAATCCACCAAAGAGGAATTTAAAC	TTTTTTTCAGAGTAAGCACACCAGTGAGAATTAAAA
GTTTCAATCCACCAAAGAGGAATTTAAAC	ACTTTAGAGTTTGCTTTAGCTAGCTAATAGTTAATTT
GTTTCAATCCACCAAAGAGGAATTTAAAC	AGTGATCACAATATTAGAAGAAGAGTCATAATAAGT
GTTTCAATCCACCAAAGAGGAATTTAAAC	GTGTTAAAACTTTTTAGGTTCAGCTATTCAAGAAG
GTTTCAATCTACCAAAGAGGAAATTTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_015682.1\|WP_013910008.1\|1219674_1220184_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_015682.1\|WP_013910012.1\|1227185_1227596_-\|HEPN-domain-containing-protein	unknown	unknown	gnl\|CDD\|368314
NC_015682.1\|WP_041430363.1\|1226344_1226836_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_015682.1\|WP_013910007.1\|1217153_1219682_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_015682.1\|WP_041430358.1\|1213802_1214873_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_013910003.1\|1211488_1212484_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|236324
NC_015682.1\|WP_013910015.1\|1229189_1230563_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NC_015682.1\|WP_041430359.1\|1214875_1215244_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_013910014.1\|1227961_1229107_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NC_015682.1\|WP_041430362.1\|1226093_1226363_-\|transposase	unknown	unknown	gnl\|CDD\|307151
NC_015682.1\|WP_013910011.1\|1225362_1225713_+\|hypothetical-protein	unknown	unknown	unknown
NC_015682.1\|WP_013910013.1\|1227592_1227910_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NC_015682.1\|WP_041430695.1\|1220183_1221155_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_015682.1\|WP_013910018.1\|1232846_1233701_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238576
NC_015682.1\|WP_013910004.1\|1212450_1212912_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_015682.1\|WP_013910005.1\|1213068_1213800_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NC_015682.1\|WP_013910016.1\|1230626_1231700_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NC_015682.1\|WP_013910010.1\|1221156_1221438_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_015682.1\|WP_013910006.1\|1216318_1217152_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NC_015682.1\|WP_013910017.1\|1231725_1232850_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740

Protein	Function_ID	Function_description	E-value
NC_015682.1\|WP_013910008.1\|1219674_1220184_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	2.11665e-56
NC_015682.1\|WP_041430695.1\|1220183_1221155_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	4.36215e-158
NC_015682.1\|WP_041430363.1\|1226344_1226836_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.91781e-34
NC_015682.1\|WP_013910007.1\|1217153_1219682_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.81571e-58
NC_015682.1\|WP_013910003.1\|1211488_1212484_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|236324	PRK08652, PRK08652, acetylornithine deacetylase; Provisional.	1.90331e-103
NC_015682.1\|WP_013910015.1\|1229189_1230563_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	9.72247e-22
NC_015682.1\|WP_013910014.1\|1227961_1229107_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	3.58728e-83
NC_015682.1\|WP_041430362.1\|1226093_1226363_-\|transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	1.74773e-12
NC_015682.1\|WP_013910018.1\|1232846_1233701_-\|sugar-kinase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	1.16915e-18
NC_015682.1\|WP_013910013.1\|1227592_1227910_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.44827e-10
NC_015682.1\|WP_013910012.1\|1227185_1227596_-\|HEPN-domain-containing-protein	gnl\|CDD\|368314	pfam05168, HEPN, HEPN domain.	9.72668e-26
NC_015682.1\|WP_013910004.1\|1212450_1212912_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.7349e-21
NC_015682.1\|WP_013910005.1\|1213068_1213800_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	6.89946e-33
NC_015682.1\|WP_013910016.1\|1230626_1231700_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.53725e-63
NC_015682.1\|WP_013910010.1\|1221156_1221438_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.00788e-23
NC_015682.1\|WP_013910006.1\|1216318_1217152_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	6.42451e-28
NC_015682.1\|WP_013910017.1\|1231725_1232850_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.20835e-148

>NC_015682.1|WP_013910010.1|1221156_1221438_+|CRISPR-associated-endonuclease-Cas2
MKIILIYDISLIEKEDQKRLIKVMKIARKYLHHIQKSVFEGDLTYGKLKRLENEILNVVDKKRDSVIIYTFPDGVNFERHILTDVEDLTANIL
>NC_015682.1|WP_041430695.1|1220183_1221155_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MGRNYYIFKEGRIKRSQNTIFIETKDGKRPLPIHDIDQIFVFGEMDLNTSFLNFIGKNKIVIHFFNYYGYYTGSFIPREGNISGILTVKQVEHYLDHNRRIYLAKKFVESAFHNIKRNFEKRERFDEEIEKMKELAKDISNCTTINELMSLEAHIKKINYKCIEKDTNWEFERRSIRPPHNPLNAMISFGNSLVYAHILKEIYETPLNPTISYLHEPFERRYSLALDIAEIFKPILCDRLVLKLINLNIIKEEHFERSLNFVYLKEEGRKIFVKHFDDLLEERILHRKLKRKIRYKSLIKLELYKLVKHFLGEKHYNPLKVWW
>NC_015682.1|WP_013910008.1|1219674_1220184_+|CRISPR-associated-protein-Cas4
MIDEELTIKGIEVSYYIVCKRKLWLFSHGIDFERFSDDVEVGKIISESFFKKEKLKEVEIGSAKIDFIKVKDEIIVNEIKKSKKLEEAHIWQTKFYIYTLEKLGIHAKRGIIHYPKLLKKVEVELFEDDKIKLKEAFLKIEEIKHLEKPPAVQEKPYCRNCAYYEFCFS
>NC_015682.1|WP_013910007.1|1217153_1219682_+|CRISPR-associated-helicase/endonuclease-Cas3
MIEIWAKRPKDGSIITLREHTKDLLDNLGKLYEKLPERLGNISKNDLFRLLKYACFFHDLGKVSPIFQKTLGNVDYYNEYNKQLSTEIRHNILSLFFINKEKVKEICKSDEALYSTLLSAVAFHHWREDEKEYLLGLNEDLKTTCEKLLKDSNGIKLEVILKEHFDGFSIEGFDAKDLIAFDKDLAEHIKKAGNLISAGIIPPYTLYFLPERLRLERALEIDLNLWIFLSGFLMRIDHFSSFCEKEAEIFEIEKEYPKLDLEAKFNEKFKESFWQKEVMKAIDDFKNKNVVLIAPTGLGKTEFAFLWAEGEKFFYTLPLRVATNQIFERACSYFNITIHTDDDPFINGNVGLLHSDADLYIVDKWETSRYTNWDGETPKIIEISKHFSLPVNISTGDQIFPSALKYPGYEKIYATLGYSKLIIDEVQAYDPRACAIIVKMIEDIVSLGGKFLLMTATLPNFVRSELENKGIEFTEINLYEGEIKECEEKRGTCKIEDITRHKLELIEKDIEEDIDEIIELACKGKRVLIVLNTVKKAISVHGKIENSKYDGFLGLLHSEMTLNERKRREKELEKEFSNPKPEDEKEPKILVATQVVEASLDIDADYLFTEIAPIDSLIQRMGRVMRRVDLMNGRIKGSNKEFSYEDFYEKEEANVIVYYQKDKNKIVESSKGKVYESELIQKAYKVLKDKKEIKEKEKQNLVVEFYENVEDEKNSKYLKKFYETVRILNSGYVSENKNDAHELFREIYTISIVEEDKIEEIIRKINEAPKITWLWFKKEIIAEYVINVNIWKYKDYPPKPLWNEEVEKKFEDETTRERLKRYFSGIYVVPKASPVNKGNIID
>NC_015682.1|WP_013910006.1|1216318_1217152_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLKIYQPTAHYRILFTFARRHTYPIPPYSTVIGFICNVLGIRDQWDENFEKLKEGLSLAIYGNYEYLNREYVWFRTLDKDSHIGRFGWQENRFIDQLPEHPGGQIPTRVDVLENVKLVIYIRHEDENFIEILKNAFENPSNRIYPIHLGRAEDLVVFEEIKTLNIKEEKKPLYGSLKEYNFTWLVDPGRGEKYLDFKFYPENYSEFFNKIQGSYHLITSFYRIVEGFRVFEQIPVKLFEGGSFPLSFGKPFRFIFDEEENLPLFFTKMIYPEE
>NC_015682.1|WP_041430359.1|1214875_1215244_+|hypothetical-protein
MERKIDFLIEIDSLIKKLQQKGQSISYSNNLKNLAKAINDLGFRLLEQTRLGNKDNVYYMLLRCFHANKQEFPTELVEAFKPENEKYFKTLIFSFLAPILGREDKEAQKSQETEAETEGGEA
>NC_015682.1|WP_041430358.1|1213802_1214873_+|hypothetical-protein
MEDKIILYPSNWLYNAGVVGFLKVLQYNGINFEIDGKLIIDRFAIKESYKGIFRYHEDVLNERFSIWGKNKRYPNYIQSSQKEFFENYYVKALQRIERNKHKTCSWCEGYFIPQILIDDIKSKFKRNFSSFLEQREKFQGIHFAGLGAAITEVPNSFWNLNFSTPICHLCSYLIIFHHLAFIKTPEGEIFINAPDFYLIWDLNNFAEKILAKSKEYEVRKILGSSLLQWAIKRRTLLGAWTMMNIEVIVKKGSIIDYFDLPPNITKILLDYDIANLIEEINEEKIFDLILAGKFSELEKANYFVLKTILKLKKNDEISKNDPITKYFTKYNDLQYLRRVSQILPKLYGKILEKIGR
>NC_015682.1|WP_013910005.1|1213068_1213800_+|CRISPR-associated-endoribonuclease-Cas6
MKIKIIFESKEKLSLDKDYRCHFISFLKKVFEKANLERIYQRKEYRPYTFSVWLGETFKIDEKLHTDTKISFLFSSGDPVVITNFYNGVLKLKNERFKIIGENFEIKDINLLPYKKIKTNKAIFKTIGVCVLNNPQVQKKDFKSWYITPYDDLDKFNEILYQRTNDRFKYLTGRKDAHPIRLNLLENYPIKEVMVKHYNGYVRGFKGVFELSGSPEILQFVYDYGFGIRTGQGFGLLELVKEL
>NC_015682.1|WP_013910004.1|1212450_1212912_-|GNAT-family-N-acetyltransferase
MRIRQVKPNDINDFIETYIKAYEELENYKYRTRKEIKNYFKWLYNRDKEGFIVAEENGKSVGFAGGDTNWINFEGEKVLEIHEIFVLPEFRKRGIGSQLLKHLLSYGIKKDRKLAELWVGKTNYKAINFYKKFGFKEAGEWGKWLRMTKSLTS
>NC_015682.1|WP_013910003.1|1211488_1212484_-|M20/M25/M40-family-metallo-hydrolase
MVENDKIINLLKTLVEIESPSKKEDQIKEFVKNYLKNLGYEVFESENYIATKTTSDLIVATHLDTLPLDYKFFYDGIYAYGTGVCDAKASITAMLVAAENKLNYTLAFFCDEEEDGLGSKEFVKTWENGKFAIVMEPTNLEIASKHWGSFELIIKVEGKEAHGAFPEKGINAIEKTFELYKKLKKLNLKLNPLRINGGSEKYIIPDICEIKFEIFLKPKEKISDYLEKIKFVENFGKYEIDHVYEGYISGEVVKYLEEAIKLAKLPISYTEMKSWTDALNLKERFDVVVWGPGNLEFCHTKEEKVKIEEIKKAIEVLASLNFLFSSKNKPR
>NC_015682.1|WP_013910011.1|1225362_1225713_+|hypothetical-protein
MDLSRFSDEELIEEWAFSLASQEAIETFFDDYSAEATLPYRTEIHKRGLDNHPKVIEADKKLIQYALKEKPYPPVITDDYEPPLEYWWWHIDKIGERTYPAELLPEHLRELYLQGF
>NC_015682.1|WP_041430362.1|1226093_1226363_-|transposase
MGYLGLKGNDLPEIENAIKMVYPSSEWQLCVLHTVRNSLNKVRVKDRSLFAEDLKRIYRAETEEKAKEGILRLKERWGKVSPKAVYLYN
>NC_015682.1|WP_041430363.1|1226344_1226836_-|IS256-family-transposase
MEEILNFFQQEVNNLIKNLLEKLMLEERRIYLEEIEDYANGFYTRDLLTKYGKVQNLKVPRVRNGGFRPAILPERRRAELDLTSAVITLYVFTSKISRLIKVTEDEVRSWKERALSEEYLAIFLDGTYLPIRRNEVAKEPVYLALGIKLDGRREILGFWVIWV
>NC_015682.1|WP_013910012.1|1227185_1227596_-|HEPN-domain-containing-protein
MINEEAKKWLIKAINDYKSAQKLLSQPEEEIITDTACFHCQQAVEKMLKAFLINHDIEFGRTHSIEYLIKLCSKIDKDFERLYEITEGLTEYAVDVRYPEEFYIPSIEEAKEAFDAATKVKEFVLKKLKINEKDLK
>NC_015682.1|WP_013910013.1|1227592_1227910_-|nucleotidyltransferase-domain-containing-protein
MERKIIKEVIERVLKSAGVEIDKLILFGSRARGDYKKYSDWDLLIVTKKGLSRKERQKLAHLIRKELAEYFIDGDIIIKSEEEIQKRKDVIGSIIKSAVKEGVIL
>NC_015682.1|WP_013910014.1|1227961_1229107_-|chromate-efflux-transporter
MKSIKIRTLFFSFLKLGLTAFGGPAMVAYVRELVVEKRKWLDNKTFQEGIALAQAIPGATVMQVVAYVGFKTKGIIGGLVSFIAFGLPAFLLMLFLSYIYAKTHNLPEAISIFAGLQVIVVAIVANAFLSFAKPIIKSVGEIVIAIFSFLLFLFKISPFLIIIACFLISQIIFKGTSDHKVQNSKNFNFVGILILILILFTGLIFLYFWDKILFKLSLIMMKIDLFAFGGGYASVPLMLHEIVDRLHWLDSKTFMNGIALGQITPGPIVITATFVGYLLKGLLGATLATISVFTPSFIIMAFASEISEKIRNSQIFLRAKKGLLASFSGLLLFATFKFATSVEWDFLKLTIALTSFLALYKKINILHVVLVGALISAIIFK
>NC_015682.1|WP_013910015.1|1229189_1230563_-|glycosyltransferase-family-39-protein
MNFKIWIFLVLSLLILATLIFSFFEPPSSYQELRRAILVKENIENFKFFQTYNGEPYFTKPPLYTWLASIFVKPFSSDPEGIIFPLRVFSILCYTLLFLSLIEFHQKDWQGAFFSIIVLLTNFRFFSFINRIDLEPLFVLFSFLMFWFSYLYLFKSPKRLYQYLFYLFLTAGIFIRGPLNLFYLPGLLIYSLFTKNKRGLKLILNPLGWSIFIVICLSWYGYGYFAFGKGVFQEFFNIDIKARLVSEAKDPWYFYFNHFLLNFWFCFLILFYLFWKEKIYLKERVLNLFSKLREDKELLFLLTISLAPIILLSFTGKKYDKYLLWIYPFFAILISKILIKNFPTSPLLGRLFLIPFLANLIIFGVIAYKNSTTFSDKLQNIKKEIISDHLVFWQKENPIIVFYAPTPIKVLTKEEELLIFLNQGYKIISEERLNKGRLNKSFLDPYKKVTWYVYSSW
>NC_015682.1|WP_013910016.1|1230626_1231700_+|Gfo/Idh/MocA-family-oxidoreductase
MSTAKLKIAIIGCGKAAERHKKIYQALKDEVEVVCVSDLEEEKAQKFAEALSAKSYTDYKEMLTKEDVEVVDLCLPSGLHAEVGEIILKDFKRHLLVEKPLALTLKEAKNLVILAQKYQLKLVTVFQNRANPPVIKLKEALSQNLLGNPILFSAKFYWSRDQKYYNSASWRGTWALDGGALAQQGCHFVDMLYYLGGPVESVFAKMGTYLANIEAEDLLVGILKFKNGALGTIEATTCSRPKDLKAELVVLGEKGSAILGGFAMNKLDYLAIEGIENINEFISGFEKNPDHPLGYSHYTYLRSAIKYFKTSEKDPWLVVGEEAIPSLEIIIGLYESAETGKEIKFPFKPKACRLGKR
>NC_015682.1|WP_013910017.1|1231725_1232850_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MKKIPLLDLKRSWEEIKEEVYKGWEEVFSTMKVLNGKYLQEFEKNWAEYLGVKYAFGCSCGTSALLMALIACGIEKGDEVLLQTNAFIADLEAIHWVGATPVLVEVDPNTFGPHLEDLYQKVTPKTKALLLVHMYGHPAEMDEIIKFCEKYGIILIEDASHAHGATYKGKKVGSFGKVGCFSCGPVKNLNCIGDGGVVVTDDDEVAFKIKFLRVHGQVEKNHFHFFGFNSRLDELQAVILNVRLKTLDQKNEKRRKIAKKYYEGLSDIKNLTLPPLDPDYKQSVYHRYVIRTPYRDELVTFLKERGIGTGYYYPIPLHLQKSYLTFYKNSISFPVAEKLAKESVAIPMYPELTDEEIEYIITCIRDFYKFKILI
>NC_015682.1|WP_013910018.1|1232846_1233701_-|sugar-kinase
MLGIVGIVPDEKIPLIYGTPVLEEKFLNIEKWKIPVERGTTALIASAIKTLEVLNKPNPFVFLVGDIGKGKGSKELYKFLAENIHKYNFKVLTFHYILPEVDGCLKVILAIEKLLRKPFLIADAGFMYAVKMASYANFFDLFTPDIGELAFLADEKAPHPFYTRGFLLAEEKDVETLIIRAYEHKNAPPYLLVKGEKDRIVFNQKVLATVEKPFVPELEAIGGTGDTLTGIVSALIYAGYSPEEACILSAKANRLAGALAYPTPATQISEIINFIPEAIKILIP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MH299806	Listeria phage LP-KV022, complete genome	27752-27782	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	JB137888	Sequence 7 from Patent WO2012159774	25875-25905	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	KJ094025	Listeria phage LP-032 contig 2, partial genome	14727-14757	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN114083	Listeria phage LP-013, complete genome	22798-22828	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	NC_021785	Listeria phage LP-110, complete genome	50598-50628	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN128593	Listeria phage LP-031, complete genome	22761-22791	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	NC_021787	Listeria phage LP-037, complete genome	45175-45205	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN904502	Listeria phage LP-018, complete genome	22261-22291	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	KJ094020	Listeria phage LP-026, complete genome	5265-5295	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	KJ094021	Listeria phage LP-114, complete genome	11689-11719	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN114082	Listeria phage LP-010, complete genome	22799-22829	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN693839	Marine virus AFVG_250M206, complete genome	1976-2006	6	0.806
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	JX442241	Listeria phage P70, complete genome	28326-28356	7	0.774
NC_015682_1	1.4\|318057\|31\|NC_015682\|CRT	318057-318087	31	MN693120	Marine virus AFVG_25M98, complete genome	34809-34839	7	0.774
NC_015682_3	3.23\|1223041\|36\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1223041-1223076	36	JQ680361	Unidentified phage clone 2019_scaffold132 genomic sequence	10637-10672	8	0.778
NC_015682_3	3.23\|1223041\|36\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1223041-1223076	36	NZ_CP045289	Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence	678-713	9	0.75
NC_015682_3	3.23\|1223041\|36\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1223041-1223076	36	MN871447	UNVERIFIED: Serratia phage KpLz_1_41, complete genome	292292-292327	9	0.75
NC_015682_2	2.11\|1116136\|37\|NC_015682\|CRISPRCasFinder	1116136-1116172	37	NZ_CP051210	Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence	731-767	10	0.73
NC_015682_2	2.11\|1116136\|37\|NC_015682\|CRISPRCasFinder	1116136-1116172	37	NZ_CP051210	Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence	63272-63308	10	0.73
NC_015682_2	2.17\|1116584\|37\|NC_015682\|CRISPRCasFinder	1116584-1116620	37	NZ_CP051210	Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence	731-767	10	0.73
NC_015682_2	2.17\|1116584\|37\|NC_015682\|CRISPRCasFinder	1116584-1116620	37	NZ_CP051210	Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence	63272-63308	10	0.73
NC_015682_3	3.2\|1221666\|35\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1221666-1221700	35	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	84359-84393	10	0.714
NC_015682_3	3.13\|1222387\|35\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1222387-1222421	35	NZ_CP053834	Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence	15052-15086	11	0.686
NC_015682_3	3.23\|1223041\|36\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1223041-1223076	36	KU836751	Bacillus phage Leo2, complete genome	784-819	11	0.694
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MN864145	Escherichia phage F2, complete genome	51705-51742	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MN850579	Escherichia phage mogra, complete genome	164063-164100	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KM389397	UNVERIFIED: Escherichia phage CEV1 clone contig00012 genomic sequence	1269-1306	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KT184309	Enterobacteria phage ATK47, complete genome	163430-163467	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MT446423	UNVERIFIED: Escherichia virus TH58, complete genome	103828-103865	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	LR027391	Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar009P5 genome assembly, chromosome: 1	13114-13151	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK047718	Escherichia phage p000y, complete genome	82725-82762	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KT184310	Enterobacteria phage ATK48, complete genome	91934-91971	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK639187	Shigella phage SSE1, complete genome	102305-102342	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_018855	Enterobacteria phage HX01, complete genome	95488-95525	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_041990	Escherichia phage ST0, complete genome	51859-51896	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KR422352	Escherichia phage APCEc01, complete genome	6389-6426	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MT446390	UNVERIFIED: Escherichia virus TH12, complete genome	160235-160272	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MN850622	Escherichia phage mobillu, complete genome	117255-117292	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KX130865	Shigella phage SHSML-52-1, complete genome	25494-25531	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MN850590	Escherichia phage moha, complete genome	101470-101507	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_041863	Escherichia coli O157 typing phage 3, complete genome	140786-140823	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_024124	Escherichia phage vB_EcoM_JS09, complete genome	160575-160612	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK047717	Escherichia phage p000v, complete genome	139377-139414	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MH359124	Escherichia phage SF, complete genome	111357-111394	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK373778	Escherichia phage vB_EcoM_WFbE185, complete genome	10669-10706	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	LR027383	Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar007P3 genome assembly, chromosome: 1	133775-133812	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KU255730	Escherichia phage phiE142, complete genome	24509-24546	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KM407600	Shigella phage Shf125875, complete genome	10697-10734	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	LR027386	Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar008P4 genome assembly, chromosome: 1	116556-116593	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK962754	Shigella phage JK36, complete genome	10688-10725	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	LR027390	Escherichia virus vB_Eco_mar005P1 genome assembly, chromosome: 1	110889-110926	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	LR027387	Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar006P2 genome assembly, chromosome: 1	44138-44175	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KP869111	Escherichia coli O157 typing phage 13, partial genome	9147-9184	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK373775	Escherichia phage vB_EcoM_WFK, complete genome	10693-10730	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK373784	Escherichia phage vB_EcoM_MM02, complete genome	10671-10708	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MH992122	UNVERIFIED: Escherichia phage OLB35, complete genome	10713-10750	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_024794	Escherichia phage vB_EcoM_PhAPEC2, complete genome	10664-10701	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK962757	Shigella phage JK45, complete genome	10608-10645	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MN850651	Escherichia phage moskry, complete genome	19947-19984	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KP869104	Escherichia coli O157 typing phage 6, complete genome	27910-27947	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK962756	Shigella phage JK42, complete genome	10110-10147	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK524178	Escherichia phage PHB12, complete genome	72051-72088	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MG589383	Shigella phage phi25-307, complete genome	158642-158679	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK327933	Escherichia phage vB_EcoM_G2285, complete genome	10769-10806	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MH243438	Escherichia phage vB_EcoM_NBG1, complete genome	10734-10771	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MT782071	Escherichia phage JN02, complete genome	10681-10718	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	KY703222	Escherichia phage phiC120, complete genome	100089-100126	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK327943	Escherichia phage vB_EcoM_G53, complete genome	10720-10757	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK373782	Escherichia phage vB_EcoM_KAW3E185, complete genome	10668-10705	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK373774	Escherichia phage vB_EcoM_WFL6982, complete genome	10693-10730	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	MK327934	Escherichia phage vB_EcoM_G2469, complete genome	10671-10708	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	AY303349	Enterobacteria phage RB69, complete genome	10661-10698	11	0.711
NC_015682_3	3.40\|1224149\|38\|NC_015682\|PILER-CR,CRISPRCasFinder,CRT	1224149-1224186	38	NC_041920	UNVERIFIED: Escherichia phage HP3, complete genome	19837-19874	11	0.711

1. spacer 1.4|318057|31|NC_015682|CRT matches to MH299806 (Listeria phage LP-KV022, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

2. spacer 1.4|318057|31|NC_015682|CRT matches to JB137888 (Sequence 7 from Patent WO2012159774) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

3. spacer 1.4|318057|31|NC_015682|CRT matches to KJ094025 (Listeria phage LP-032 contig 2, partial genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

4. spacer 1.4|318057|31|NC_015682|CRT matches to MN114083 (Listeria phage LP-013, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

5. spacer 1.4|318057|31|NC_015682|CRT matches to NC_021785 (Listeria phage LP-110, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

6. spacer 1.4|318057|31|NC_015682|CRT matches to MN128593 (Listeria phage LP-031, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

7. spacer 1.4|318057|31|NC_015682|CRT matches to NC_021787 (Listeria phage LP-037, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

8. spacer 1.4|318057|31|NC_015682|CRT matches to MN904502 (Listeria phage LP-018, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

9. spacer 1.4|318057|31|NC_015682|CRT matches to KJ094020 (Listeria phage LP-026, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

10. spacer 1.4|318057|31|NC_015682|CRT matches to KJ094021 (Listeria phage LP-114, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

11. spacer 1.4|318057|31|NC_015682|CRT matches to MN114082 (Listeria phage LP-010, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
tattgataatagttttgaagcttggcagttt	Protospacer
************ ********** ***.

12. spacer 1.4|318057|31|NC_015682|CRT matches to MN693839 (Marine virus AFVG_250M206, complete genome) position: , mismatch: 6, identity: 0.806

tattgataatagatttgaagcttt---gcaaagg	CRISPR spacer
tatcgttaatagatttgaagcttttacgcat---	Protospacer
***.* ******************   ***

13. spacer 1.4|318057|31|NC_015682|CRT matches to JX442241 (Listeria phage P70, complete genome) position: , mismatch: 7, identity: 0.774

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
aattgataatagttttgaagcttggcagttt	Protospacer
 *********** ********** ***.

14. spacer 1.4|318057|31|NC_015682|CRT matches to MN693120 (Marine virus AFVG_25M98, complete genome) position: , mismatch: 7, identity: 0.774

tattgataatagatttgaagctttgcaaagg	CRISPR spacer
taatgataatagatttgaagttttatcagga	Protospacer
** *****************.***.. *.*.

15. spacer 3.23|1223041|36|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to JQ680361 (Unidentified phage clone 2019_scaffold132 genomic sequence) position: , mismatch: 8, identity: 0.778

atctcctttcttttttttcttttttctgttcatgtg	CRISPR spacer
gtctcctttctttttgctcttttttctcatgctctg	Protospacer
.************** .**********  *  * **

16. spacer 3.23|1223041|36|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045289 (Curtobacterium flaccumfaciens pv. flaccumfaciens strain P990 plasmid pCff2, complete sequence) position: , mismatch: 9, identity: 0.75

atctcctttcttttttttcttttttctgttcatgtg	CRISPR spacer
ttttcctttcctttttttcttttttctttttttcct	Protospacer
 *.*******.**************** **. * .

17. spacer 3.23|1223041|36|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN871447 (UNVERIFIED: Serratia phage KpLz_1_41, complete genome) position: , mismatch: 9, identity: 0.75

atctcctttcttttttttcttttttctgttcatgtg	CRISPR spacer
ttatcttttcttttttttcttttttcagtgaccgta	Protospacer
 * **.******************** **   .**.

18. spacer 2.11|1116136|37|NC_015682|CRISPRCasFinder matches to NZ_CP051210 (Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence) position: , mismatch: 10, identity: 0.73

aaatgatttaattaaatgttgatagttcaaccaaaag	CRISPR spacer
taatcgaacaattaaatgtttatatttcaaccaaaca	Protospacer
 *** .  .*********** *** ********** .

19. spacer 2.11|1116136|37|NC_015682|CRISPRCasFinder matches to NZ_CP051210 (Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence) position: , mismatch: 10, identity: 0.73

aaatgatttaattaaatgttgatagttcaaccaaaag	CRISPR spacer
taatcgaacaattaaatgtttatatttcaaccaaaca	Protospacer
 *** .  .*********** *** ********** .

20. spacer 2.17|1116584|37|NC_015682|CRISPRCasFinder matches to NZ_CP051210 (Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence) position: , mismatch: 10, identity: 0.73

aaatgatttaattaaatgttgatagttcaaccaaaag	CRISPR spacer
taatcgaacaattaaatgtttatatttcaaccaaaca	Protospacer
 *** .  .*********** *** ********** .

21. spacer 2.17|1116584|37|NC_015682|CRISPRCasFinder matches to NZ_CP051210 (Acinetobacter sp. NEB149 plasmid pMsp65, complete sequence) position: , mismatch: 10, identity: 0.73

aaatgatttaattaaatgttgatagttcaaccaaaag	CRISPR spacer
taatcgaacaattaaatgtttatatttcaaccaaaca	Protospacer
 *** .  .*********** *** ********** .

22. spacer 3.2|1221666|35|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 10, identity: 0.714

tttgatagaaaacaaaacaaaaaagaggtaaatgg	CRISPR spacer
cttgatagaatacaaaagaaaaaagattattagga	Protospacer
.********* ****** ********     * *.

23. spacer 3.13|1222387|35|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053834 (Arcobacter cloacae strain LMG 26153 plasmid pACLO, complete sequence) position: , mismatch: 11, identity: 0.686

gattttgatatggattatttttggacttttgttgg	CRISPR spacer
ttcatcaatttgggttatttttggacttttgtatc	Protospacer
  . *..** ***.******************

24. spacer 3.23|1223041|36|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KU836751 (Bacillus phage Leo2, complete genome) position: , mismatch: 11, identity: 0.694

atctcctttcttttttttcttttttctgttcatgtg	CRISPR spacer
cctgcctttcttttttttcgtttttcttttcggaga	Protospacer
 .. *************** ******* ***. . .

25. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN864145 (Escherichia phage F2, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

26. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN850579 (Escherichia phage mogra, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

27. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KM389397 (UNVERIFIED: Escherichia phage CEV1 clone contig00012 genomic sequence) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

28. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KT184309 (Enterobacteria phage ATK47, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

29. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MT446423 (UNVERIFIED: Escherichia virus TH58, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

30. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to LR027391 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar009P5 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

31. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK047718 (Escherichia phage p000y, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

32. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KT184310 (Enterobacteria phage ATK48, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

33. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK639187 (Shigella phage SSE1, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

34. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_018855 (Enterobacteria phage HX01, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

35. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_041990 (Escherichia phage ST0, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

36. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KR422352 (Escherichia phage APCEc01, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

37. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MT446390 (UNVERIFIED: Escherichia virus TH12, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

38. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN850622 (Escherichia phage mobillu, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

39. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KX130865 (Shigella phage SHSML-52-1, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

40. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN850590 (Escherichia phage moha, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

41. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_041863 (Escherichia coli O157 typing phage 3, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

42. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_024124 (Escherichia phage vB_EcoM_JS09, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

43. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK047717 (Escherichia phage p000v, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

44. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MH359124 (Escherichia phage SF, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

45. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK373778 (Escherichia phage vB_EcoM_WFbE185, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

46. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to LR027383 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar007P3 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

47. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KU255730 (Escherichia phage phiE142, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

48. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KM407600 (Shigella phage Shf125875, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

49. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to LR027386 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar008P4 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

50. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK962754 (Shigella phage JK36, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

51. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to LR027390 (Escherichia virus vB_Eco_mar005P1 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

52. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to LR027387 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar006P2 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

53. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KP869111 (Escherichia coli O157 typing phage 13, partial genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

54. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK373775 (Escherichia phage vB_EcoM_WFK, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

55. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK373784 (Escherichia phage vB_EcoM_MM02, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

56. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MH992122 (UNVERIFIED: Escherichia phage OLB35, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

57. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_024794 (Escherichia phage vB_EcoM_PhAPEC2, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

58. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK962757 (Shigella phage JK45, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

59. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MN850651 (Escherichia phage moskry, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

60. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KP869104 (Escherichia coli O157 typing phage 6, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

61. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK962756 (Shigella phage JK42, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

62. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK524178 (Escherichia phage PHB12, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

63. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MG589383 (Shigella phage phi25-307, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

64. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK327933 (Escherichia phage vB_EcoM_G2285, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

65. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MH243438 (Escherichia phage vB_EcoM_NBG1, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

66. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MT782071 (Escherichia phage JN02, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

67. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to KY703222 (Escherichia phage phiC120, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

68. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK327943 (Escherichia phage vB_EcoM_G53, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

69. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK373782 (Escherichia phage vB_EcoM_KAW3E185, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

70. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK373774 (Escherichia phage vB_EcoM_WFL6982, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

71. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to MK327934 (Escherichia phage vB_EcoM_G2469, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

72. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to AY303349 (Enterobacteria phage RB69, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

73. spacer 3.40|1224149|38|NC_015682|PILER-CR,CRISPRCasFinder,CRT matches to NC_041920 (UNVERIFIED: Escherichia phage HP3, complete genome) position: , mismatch: 11, identity: 0.711

cttcatagccttcttaaaatcaaccaaattcttgcccc	CRISPR spacer
attcatagcattcttaaaatcaacccaactacatacga	Protospacer
 ******** *************** **.* .   *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_015682

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection