CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_015520	Mahella australiensis 50-1 BON, complete sequence	4 crisprs	c2c4_V-U1,WYL,cas14k,RT,cas4,csa3,cas3,DEDDh,cas2,cas1,cas5,cas7b,cas8b1,cas6,Cas9_archaeal,csf3gr5,csf2gr7,csf1gr8	1	7	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_015520_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015520_1

271580-271668

TypeV-U1

Consensus_repeat	Method
GGTTTATATTAACAATGTGGGATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_015520_1

>merge|NC_015520|1|271580-271668|CRISPRCasFinder
GGTTTATATTAACAATGTGGGATGTAAAGAAGGATATAAGGATGTTTACAGGGTCATTGGGCGGCGGTTTATATTAACAACGTGGGATG

>NC_015520|1|1|271580-271668|CRISPRCasFinder
GGTTTATATTAACAATGTGGGATG	TAAAGAAGGATATAAGGATGTTTACAGGGTCATTGGGCGGC
GGTTTATATTAACAACGTGGGATG

Protein	Signature genes	Signature genes Name	Protein_function
NC_015520.1\|WP_148258359.1\|269405_270596_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NC_015520.1\|WP_013779906.1\|278675_279326_+\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
NC_015520.1\|WP_013779889.1\|262416_263976_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NC_015520.1\|WP_013779893.1\|268253_269324_+\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NC_015520.1\|WP_041644231.1\|271766_272498_+\|ZIP-family-metal-transporter	unknown	unknown	gnl\|CDD\|235253
NC_015520.1\|WP_041643755.1\|266169_266382_+\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234576
NC_015520.1\|WP_013779896.1\|270988_271396_+\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013779901.1\|274021_274654_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NC_015520.1\|WP_013779892.1\|267386_268232_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NC_015520.1\|WP_013779895.1\|270619_270976_+\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_041644233.1\|276536_277673_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NC_015520.1\|WP_013779905.1\|277793_278645_+\|class-II-fructose-1,6-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|237235
NC_015520.1\|WP_041643753.1\|261638_262316_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NC_015520.1\|WP_013779903.1\|275982_276495_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|225042
NC_015520.1\|WP_013779900.1\|273552_274032_+\|ribose-5-phosphate-isomerase-B	unknown	unknown	gnl\|CDD\|376799
NC_015520.1\|WP_013779902.1\|274686_275970_+\|citrate-transporter	unknown	unknown	gnl\|CDD\|238536
NC_015520.1\|WP_013779899.1\|272500_273190_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227505
NC_015520.1\|WP_013779907.1\|279342_281148_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NC_015520.1\|WP_013779891.1\|266469_267396_+\|DUF1385-domain-containing-protein	unknown	unknown	gnl\|CDD\|377780
NC_015520.1\|WP_013779793.1\|264678_266016_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256

Protein	Function_ID	Function_description	E-value
NC_015520.1\|WP_013779793.1\|264678_266016_-\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	0.00142885
NC_015520.1\|WP_013779906.1\|278675_279326_+\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	2.06924e-149
NC_015520.1\|WP_013779889.1\|262416_263976_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NC_015520.1\|WP_013779893.1\|268253_269324_+\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NC_015520.1\|WP_041644231.1\|271766_272498_+\|ZIP-family-metal-transporter	gnl\|CDD\|235253	PRK04201, PRK04201, zinc transporter ZupT; Provisional.	3.27847e-27
NC_015520.1\|WP_041643755.1\|266169_266382_+\|50S-ribosomal-protein-L31	gnl\|CDD\|234576	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed.	6.92977e-38
NC_015520.1\|WP_013779901.1\|274021_274654_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	5.69628e-134
NC_015520.1\|WP_013779892.1\|267386_268232_+\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	5.72378e-120
NC_015520.1\|WP_148258359.1\|269405_270596_+\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.28172e-59
NC_015520.1\|WP_041644233.1\|276536_277673_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NC_015520.1\|WP_013779905.1\|277793_278645_+\|class-II-fructose-1,6-bisphosphate-aldolase	gnl\|CDD\|237235	PRK12857, PRK12857, class II fructose-1,6-bisphosphate aldolase.	6.6132e-173
NC_015520.1\|WP_041643753.1\|261638_262316_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.19204e-25
NC_015520.1\|WP_013779903.1\|275982_276495_+\|cytidine-deaminase	gnl\|CDD\|225042	COG2131, ComEB, Deoxycytidylate deaminase [Nucleotide transport and metabolism].	1.69421e-66
NC_015520.1\|WP_013779900.1\|273552_274032_+\|ribose-5-phosphate-isomerase-B	gnl\|CDD\|376799	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase. This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).	9.53612e-84
NC_015520.1\|WP_013779902.1\|274686_275970_+\|citrate-transporter	gnl\|CDD\|238536	cd01116, P_permease, Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.	1.96473e-85
NC_015520.1\|WP_013779899.1\|272500_273190_-\|hypothetical-protein	gnl\|CDD\|227505	COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification].	0.00065422
NC_015520.1\|WP_013779907.1\|279342_281148_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NC_015520.1\|WP_013779891.1\|266469_267396_+\|DUF1385-domain-containing-protein	gnl\|CDD\|377780	pfam07136, DUF1385, Protein of unknown function (DUF1385). This family contains a number of hypothetical bacterial proteins of unknown function approximately 300 residues in length. Some family members are predicted to be metal-dependent.	2.76517e-132

>NC_015520.1|WP_013779896.1|270988_271396_+|hypothetical-protein
MYVLFIVLNNVDKLKKVLAALKDVGVRGATIIDSVGSGSMMKEEFSGMPIIGSLMRSLEGNYGANKTIFSVIEREEQVNDAMAAVSKVLGDMNRPDTGIMFALPVVKFKGGELERHIDRRERRNIIQKQYESEYY
>NC_015520.1|WP_013779895.1|270619_270976_+|hypothetical-protein
MFALFIVLNRTEYLKDVLKAIEDVGLSCTVIDSVSANQYVNFYSPNTFASYDVPVVVGSMSMADDDSGIIYNKTLMVLVDDEEKAQQAMGAVESVVSDMTRPGTGIMFYVPVAKAVGK
>NC_015520.1|WP_148258359.1|269405_270596_+|cation:proton-antiporter
MVESATYLLQLAILLIAGLVGAYISRKVDQPSVLGQIIIGIIIGPSLLNLNIITSDTTLIEEFANIGVVLLMFIAGVETDLNELRDSGKASMIIASTGVLVPMILGFAVAAMEGIDMMTAIFIGVILTATSVSITVQVLREIGKLKTRQGVAILGAAVIDDVLGIILLSVVAGMVRPGATENIWLLLGKMALFFVGAVIIGLILYRLVTRLVLSRIRIGESLLTLALIFTFIFSFFAEYVGVAAITGAYVAGLILSATPYKNRISNGAQILAYNLFTPIFFINIGLGVNVRLLGGVLVFGTLLTLAALIGKIVGCGIGAKISGFNNRESLQVGIGMMSRGEVGLIVASLGESMGIIGPDVYAAIIMMILISTLTTPLLLKMSFKEKPAMAGGNVAN
>NC_015520.1|WP_013779893.1|268253_269324_+|peptide-chain-release-factor-1
MLDKLDSIEERYEQLSVKISDPEVISQQDMWRKLVKEHSDLEPIVTKYREYKEVVRQKDDVLAMIKETGDAELKELAQQELDELKEREDKLEEELKRLLLPKDPNDERNVIMEIRAGAGGEEAALFAANLFRMYSLYAESRGWKIEVMDSNYTDLGGIKEIVFAVEGKGAYSRLKYESGVHRVQRVPVTEAGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVYRSTGHGGQSVNTTDSAVRITHIPTGMVVTCQDEKSQLKNKDKAMRVLKSRLLAIAQAEQDAQLAQTRRSQVGTGDRSERIRTYNFPQGRVTDHRIGLTIYQLEAFLNGDMDEMIDALITADQAERLSQAAV
>NC_015520.1|WP_013779892.1|267386_268232_+|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MDVARALEWGERMLRESGIDTARRDVEILLQELLDVDRSALYLDRSRALLPEQKIMFEQWIKQRCARMPLQYVLHKAWFMDMELYVDERVLIPRPETELLVEVVIKEAKGMSEPLQVLDIGTGSGAIAIALARHMSGCRVWAVDISPDALAVARINVGKYSLQQRVTLLEGNLFEPVKGMAFDIIVSNPPYIVRDDLIELEPEVRSEPEPALNGGDDGLDFYRKLCHAGELLKPHGFLALEIGYDQGQAVSDILKACGFKDIQVLKDFANMDRIVLAHKWK
>NC_015520.1|WP_013779891.1|266469_267396_+|DUF1385-domain-containing-protein
MRKTKIGGQAVIEGVMMKGPRSMAMAIRKSDGTIEVVKKPSVPLSQRHPLLKLPIIRGMASFVDSLITGMTSLTDSAKIYGEGLEEEYKPSRFERFLSEKTGMNVDDIGIAFAVIIAVVLAVAFFVLLPTYVAGLLQQAITSPLALNLIEGVIRIALFLGYMVLVTRMKDIQRVFEYHGAEHKVIHCFEHEEELTVENARKYTTLHPRCGTNFLLLVLVVSIVLFSFLGWGNILWRTVGRLLLLPVVAGLAYELIRWAGSSDALIVRIISWPGLMLQKLTTRQPDDQQLEVAIAAFNGVADGEEDIWM
>NC_015520.1|WP_041643755.1|266169_266382_+|50S-ribosomal-protein-L31
MKENIHPTYYKDAKVICACGNTFTTGSTKKEIHVEMCSQCHPFFTGKQKLVDTGGRVERFRQRYGLKEDQ
>NC_015520.1|WP_013779793.1|264678_266016_-|ISNCY-family-transposase
MTESEMQKLVVINKVIDGTLTASEAAQVLDLSVRQIFRLKKGVKEQGASFVIHKNRGRKPANALSDELVNHILTLRKEKYFDTNFSHFRDLLEDDKGIILSNSSVYRILDNAGIQSPRKHRRPRKIHARRERMPQAGMLVQIDCTSFEWIPSVGNMALHGAIDDATGQVLALYFTENECMNGYFELMRTIIGQYGIPISLYADKHTIFASPNKGKISIEEQLEGKVVNETQFQMAMSTLGISIINARSPQAKGRVERLWNTLQDRLRAELRIYGIDSMEKANEFLPKFLERYNKRFAIEPQDPEPAFRELPPDIDLDNILCVKLSRKVDNGGVFSLHSQYYQVVCDDGKTVAPIVPRAKITVLTSPRIGIRVQYGNNIYAVKKLDEPPKKAQKANKASSSSTAKPYKPSPTHPWKQGWQKAPSYWYEESDREILEALYNSSRAWH
>NC_015520.1|WP_013779889.1|262416_263976_+|hydroxylamine-reductase
MSNMFCFQCEQTSGGNGCRNVGVCGKDAVTAVAQDDLTREMIALARMGLANGRTKRADELIVDGLFATVTNVNFDPQAISCLKDEIKAEREGLGGQPFDGPLFEGDTDIVSLRSTLLFGMRGMAAYAHHARILGKVDDEVTGWFYKGLSELANEHSIDEWLGLLMEFGKVNFRCMELLDEANTGAYGNPSPVRVTYNIEKGPFIVVTGHDLHDLYLLLEQTKDKGINIYTHGEMLPAHAYPELHKYPHLKGHFGTAWQNQQKEFKDLPAPVLFTTNCLMPPKDSYKDRVFTTSVVAYPGAVHIIEDENGNKDFSQLIDKAIELGGYPEDKKMTGINGGDVLTTGFAHDAVLSVADKVIDAVKSGAIKHIFLVGGCDGARPGRNYYTEFVKQTPQDSVVLTLACGKFRFNDIDAGEIGGLPRIMDMGQCNDAYSAVKVALALADAFGVGVNDLPLSLVLSWYEQKAVCILLSLLALGVKNIRLGPTLPAFLSPNVLQVLADNFGIKPITTPEEDLKAILG
>NC_015520.1|WP_041643753.1|261638_262316_-|Crp/Fnr-family-transcriptional-regulator
MMSSLNIKSPLFEGIEDDDLDAMLSCLNAKAASFPRGDNIVCAGDEISNIGVVLFGEVNVSKDDAFGRRQIIANLKAGDTFSEVFVCAGINESPVTVTAATNADILFIDYAFSIKRCTKSCIFHTKLIENMLSLLAQKNIALSAKIDYLSTKSLRSRIAAYLLDESKKQTSDLFYIPFNRNGLADYLGADRSAISRELSRMRDDGLIEYWKNSFKIIDRKALQKV
>NC_015520.1|WP_041644231.1|271766_272498_+|ZIP-family-metal-transporter
MLLYSVIGSAAGIIGTGLGGAITLLLRHPSSRFLSTIMNFSSGLMIAVVTFDLLPEAFSIGGLGQGLIGLLLGVGLIVMLDGFMPKALRMDISDARSGYLKAGILLGIGIAVHNLPEGIAIGSGFTVYKQYGLALSMIIALHDIPEGVAMATPMMMGGIAKKQVLASTVLAGIPTGIGAIAGYYLGELSPTFIAVCLGFAGGAMLYITCSELLPESSKLYRGRIPSMGTIAGIILGIVISSII
>NC_015520.1|WP_013779899.1|272500_273190_-|hypothetical-protein
MFYPPYSPGYPGQNPCYPGPGMSYPPCGDQRGLMMQAMDIFMRNEPLMKQMHEKIHAMMQKPELANDATFQDMMMHFREMGDYGNKTAGYIAALLCQSPGGYTPPSDWYYYPPMPHHDCSRMCIDEMMKNYVQPMDEHHRAVKADIENLKANPRFAQNSDFMEFMALFEQHDALSQQLMNILNQLAAGAMPPMYPPPGTMPPMYPPPGAMPPDNMPPMYPPSDMGYMGY
>NC_015520.1|WP_013779900.1|273552_274032_+|ribose-5-phosphate-isomerase-B
MIIALGSDHAGFPLKEEIKNHLQQKGIEYKDYGCYSIESVDYPDIAETVALAVVQGQCDKGILVCGTGIGVSIAANKVPGIRAALCGDVFSAKASVEHNDANILTMGQRVTGPGLAIEIVDAWLAAAFLGDRHKRRVDKITALDRKYGRCLSEEKIDGQ
>NC_015520.1|WP_013779901.1|274021_274654_+|uracil-phosphoribosyltransferase
MGNNVIVLDHPLIQHKLTLLRDKSTGSKEFRELLDEIAMLMAYEVTRDLPLKEVEIETPVGKARSRVISGKKLAVIAILRAGLGMTDGILRLVPAAKVGHIGLYRDPDTLRPVDYYCKLPGDIQERDVILVDPMLATGGSADEAIKLLEQKGARSIKLMCLIASREGIEYINHQHPDVPIYTAAIDEKLNEHGYIVPGLGDAGDRLFGTK
>NC_015520.1|WP_013779902.1|274686_275970_+|citrate-transporter
MTIFVVTYALIISEKIHRSVIGIIGALVLIVFGILSFEQAIDYINWETIGLLMGMFTLVALLSEAGFFSFMALWTARLFHYKARLIFIAFPVLAALLAAFMDSVTVTLFLTLLTLRLCRLFKTDPVPFVIAEVMAANVGGAATLVGDPPNVIIGTIMGYSFSDFATNTGPIVIVAISVLMFYLYFTHRSLFGNDGEDIVNEDIKSMNPVSAIKSAFLLRLGLIAFAAAVAGLILKEPIKAWFGVEYNSAVAALLPASIALAFLGEHAHRIIDHLDYDILLFFMALFVIVGGLEATGAIEVMARWLVSLAGGSALGMIFLLLFGTGITSAVVDNVPLALAMAYIIKSISQAGGLALPLMVWTLALGVDIGGNMTPIGASANVVAYSLLKSKDTSVSWAYWLKEAVIPTLLVLGVCYGMLLLKLYTGWY
>NC_015520.1|WP_013779903.1|275982_276495_+|cytidine-deaminase
MRPSWDEYFMNMVEIVKTRSTCLRRQVGAIIVKDKRMLASGYNGAPSGVRHCDEVGCLREQMHIPSGQRQELCRAIHAEQNAIAQAAMMGISVKDATIYITTQPCAICAKMIINAGITRIVYKGDYPDALAMDLLREAGIEVARFEDGNLVKVRLEPLPDDENEAHGHDD
>NC_015520.1|WP_041644233.1|276536_277673_+|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MSVFGTRPEAVKMAPLIKEMDRHPNYVENIVCITAQHREMLDQVLRLFDIKPDFDLNIMQDRQTLADITVRALHGLYDLYGRANPDLVLVHGDTTTTFAASLAAFYRHIAVGHVEAGLRTHNKYFPFPEEINRKLTAVVADLHFAPTAAAKKNLIKENIPVDNIFVTGNTVIDALLTTVKDEYKFQTPQLQELDFKNQRILVVTAHRRENIGAPLENICLALKEIVEKYDDVHIVYPVHLNPSVRDTVFSMLGNIKRIMLLDPLDTEELHNLMARCYLVLTDSGGLQEEAPSLGRPVLVLRDVTERPEAVEAGTVKIIGTDVDAVTKETSRLLDDADEYKRMANAINPYGDGHASERIVQAILYKFNICNDRPLEFLQ
>NC_015520.1|WP_013779905.1|277793_278645_+|class-II-fructose-1,6-bisphosphate-aldolase
MLVNTREMLDKAREKGYAIGAFNMSNMEILQAIVQAAEIENAPVIVQASQAALKYAGVDYIEAMGKLAAQKASVPVAIHLDHGTDFNLIMLCIRHGFTSVMIDGSKYQFEENIAITKKVVEIAHAVDVSVEAELGKIGGTEDHITVSEKEALYTEPEEAVRFAKETGVDSLAISIGTAHGPYKGEPKLDFDRLAEIRSMLDIPIVLHGASGVPDESIRKAVERGVCKINIDTEIRQSFTEAVRKILADNPAEYDPRKVLGVAKEAMIETVSGKMRLFGCSGRA
>NC_015520.1|WP_013779906.1|278675_279326_+|fructose-6-phosphate-aldolase
MKLFIDTANVDEIKEANDWGVICGVTTNPSLVAKEGRDFMQVLKEICGIVDGPISAEVISTQHEGMVEEAKKLAAVHPNVIIKIPMLPEGLKAVKILSQQGIKTNVTLIFSAAQALLAARAGATYVSPFVGRLDDVANEGMQVVKDIADIFLLHDIPTQIIAASIRHPMHVIEAAKAGSHIATVPYKVLQQMFSHPLTDIGIERFLKDWEGVKFKF
>NC_015520.1|WP_013779907.1|279342_281148_+|transcription-termination-factor-Rho
MDFDNLEEKGIFELRDIGRQVGVKGVTRYRKQQLLDMIKQKLDEMRQEYKKAQPEQVSIEEDTSKPIAEEAEPEEDIDEVDTTIEPEFEDEVDIEPEIEDEVEQPRYEQPKYEQPRREQPRYEQPRREQPPYDQPRYDQPRYDQPRREQIPYDQPRYDQPRREQSGYDRPNGRIDRNSPQTGERYNRWGGTQTNHYQRQPYGYQQRSTGVPESLKELEYGDAEGVLEVLPDGYGFLRSENYLPGNKDVYISQSQIRRFGLRTGDLVKGKTRQAKEGEKFQALLYVTSVNGEDPETALRRKPFDELTPIFPDERITLEDHDNPQELSTRLIDLIAPIGKGQRGLIVSPPKAGKTILLKKIANSITKNFPDIHVIVLLIDERPEEVTDMKRSIKGEVIYSTFDEMPEHHAKVSEMVLERAKRLVEHKKDVVILLDSITRLSRAYNLTIAPTGRSLSGGLDPGALYKPKKFFGSARNIEEGGSLTIIATALIETGSRMDDVIFEEFKGTGNMEIYLDRKLSEKRIFPAVDINRSGTRREELLLSQKEMECIWAIRKALSSMGTSEVTEYLISRLIKTSSNEEFIDMIKDGLSNLSTEERAILAR

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Crispr_ID: NC_015520_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015520_2

2336692-2342216

TypeI-B

Consensus_repeat	Method
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CRISPRCasFinder
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CRT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	PILER-CR

82 spacers

cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

The CRISPR arrays of NC_015520_2

>merge|NC_015520|2|2336692-2342216|CRISPRCasFinder,CRT,PILER-CR
GTTTCAATTCCTCATAGGTAGGCTAAAAACTGTTATCCGTCATAGTACCTCCCTGTTTTTTTATATTGTTTCAATTCCTCATAGGTAGGCTAAAAACATAAACTTTTTGCGCCTTAAATTACCTTCCATAACTTGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGACGTTTCAATTCCTCATAGGTAGGCTAAAAACAATGGTAATATTTTGGATATTTTATCACCTTTGCCGCGTTTCAATTCCTCATAGGTAGGCTAAAAACCTTTGCCTGCGCAACATCATCATGAAACGCTATTTGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGACGTTTCAATTCCTCATAGGTAGGCTAAAAACAATGGTAATATTTTGGATATTTTATCACCTTTGCCGCGTTTCAATTCCTCATAGGTAGGCTAAAAACCATTAATAGCGTTATCTATAGAATTTTCTATATTATGTTTCAATTCCTCATAGGTAGGCTAAAAACTTGAATCTAGTTTCACGCAAGAAAGGAAACCACGCGTTTCAATTCCTCATAGGTAGGCTAAAAACTCATCATATGGCATTGAAAATGAAAATGTTTCAGCATCATTGTTTCAATTCCTCATAGGTAGGCTAAAAACAAAAATCCATCAAGAATGGGAGTTGGGTTTATCATTTGTTTCAATTCCTCATAGGTAGGCTAAAAACATTCTGCCCTGGTCATCCCTCACGCTGTCATCGGGAAGTTTCAATTCCTCATAGGTAGGCTAAAAACTGGATACATATCTTCATTTTCGGGTGAAGTAGCATCGTTTCAATTCCTCATAGGTAGGCTAAAAACTAGCTAACCATGCTGTTACGCTTTTGTCGTATTCCTGTTTCAATTCCTCATAGGTAGGCTAAAAACGTCACCTTGGAACTTTATTTTATTGTCTCCAATTACAGTTTCAATTCCTCATAGGTAGGCTAAAAACCCCAATTGTATATTTATATTATTTGGTATAGTCAAATGTTTCAATTCCTCATAGGTAGGCTAAAAACCAGTAACTGTTATTGGATTAGTTCCACCATTTTTTAGTTTCAATTCCTCATAGGTAGGCTAAAAACCTGGTGAATTTACAGACCCCACAAAGTTTATTGTGCGTTTCAATTCCTCATAGGTAGGCTAAAAACCAGATTTGTCTGTAAATGAATTACAATGGATACTCAGTTTCAATTCCTCATAGGTAGGCTAAAAACAAATTAGAGTTTACTAATACGTTAGTATTAGTATTCTGTTTCAATTTCCCAATTTCGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAATGGCTGGAAGTATACTGCAAACCAAAATTAGCGCCGTTTCAATTCCTCATAGGTAGGCTAAAAACGGATATATGCAAGGAGAATAGAAAGAGAGGGCAATGAGTTTCAATTCCTCATAGGTAGGCTAAAAACCCATAGCTAATGTGCTACAAGAATGGCGCATGTGGAGGTTTCAATTCCTCATAGGTAGGCTAAAAACAAAATGGTATTCCGGCTATAAGAGCAGTAAAGACGCGGTTTCAATTCCTCATAGGTAGGCTAAAAACAGTATAATGGCGGCTTATCCCATATGGCACTTTCGATGTTTCAATTCCTCATAGGTAGGCTAAAAACCTTTGGTTTCCCAGCTCCAGTTGTAATGCTTATTTTGTTTCAATTCCTCATAGGTAGGCTAAAAACTTATCGCCTGCTCTAAATCTAATCGCAGAAAGCCTATGTTTCAATTCCTCATAGGTAGGCTAAAAACCGACGATTACGTATAACATAGATAATGCGAAGTCGAGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAGGTATTGGAATGGAAGTATTAACATACGAATTATCGTTTCAATTCCTCATAGGTAGGCTAAAAACTAAAATCGCTGCTACTATCCAAGTGATTGGATTGGCGTTTCAATTCCTCATAGGTAGGCTAAAAACATTCAATAAGGTCAAGGATGCTATAATAGCACCATTGTTTCAATTCCTCATAGGTAGGCTAAAAACCCATGTAATATCTTGCGAAGTTAGTTTTGCGCTATTTGTTTCAATTCCTCATAGGTAGGCTAAAAACTTGAATATGTGAAACCAGTTCTAGAAGCCAAAGCCGCGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAGAGCGGCAAACAGGCATATGAAGCGGTAAAAGCCGGTTTCAATTCCTCATAGGTAGGCTAAAAACTTTCGCCAACTTCTTTTATTTTGTTCCATGTATTGATGTTTCAATTCCTCATAGGTAGGCTAAAAACGCGGGCGTGTGTACTACAGGTGTGGCCGCGGAGAATAGTTTCAATTCCTCATAGGTAGGCTAAAAACTGGTATGACTACATATAGATTTCGTAATGATGGCTTGTTTCAATTCCTCATAGGTAGGCTAAAAACAATCCCATATATGGGTCATATATTCTTTGGCATCTCAAGTTTCAATTCCTCATAGGTAGGCTAAAAACTTGCATAGCAAAAGCCGAAGAAAGAGAGGCGTTATAGTTTCAATTCCTCATAGGTAGGCTAAAAACGCCCGTTAAAAGGTAATAACAAAGATGTGTATTGTGGTTTCAATTCCTCATAGGTAGGCTAAAAACCAAGCGCGCTTGGAAGTGTGCCTGCTATTCTTTATGGTTTCAATTCCTCATAGGTAGGCTAAAAACGTCAGCATCTGGATTGTCGTATCCGAAATTTGCCTTAGTTTCAATTCCTCATAGGTAGGCTAAAAACTTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGCGTTTCAATTCCTCATAGGTAGGCTAAAAACTTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGCGTTTCAATTCCTCATAGGTAGGCTAAAAACTTCTATCCGTAACGCTTAATTTTAACCATCGCTCGAAGTTTCAATTCCTCATAGGTAGGCTAAAAACAATTACTATGTTATGATTGCCACAATAAGGAGCACAAGTTTCAATTCCTCATAGGTAGGCTAAAAACAATAAGCCGAGAACTTAACAATCTAATCCAAACCTCGGTTTCAATTCCTCATAGGTAGGCTAAAAACAGAGCAGCCGAATCGATATTTACTAGACATCGGCGAGTTTCAATTCCTCATAGGTAGGCTAAAAACCAGTAGCAGCTATATTAGAAAACTCTACAGAACTCTGTTTCAATTCCTCATAGGTAGGCTAAAAACAAATTTACAGCAGAAAGATAATGAACGTATTGCCTCGGTTTCAATTCCTCATAGGTAGGCTAAAAACTGAGGAAATGGCTGATGTATTCATTCGGTCGGGCGATTGTTTCAATTCCTCATAGGTAGGCTAAAAACTCAATGTATTTTTTATTTCTCTTTCTATTATTATTAGTTTCAATTCCTCATAGGTAGGCTAAAAACGAGCAGATGTCAAAAAAGCAGATTTTGTAGTATTGCGGTTTCAATTCCTCATAGGTAGGCTAAAAACCCATAGGAGATGAGCATGGAAGGTTTGCTGTTAAAAGTTTCAATTCCTCATAGGTAGGCTAAAAACCCACTCTTTCATCACTAATCATTATGATTTGTAAATTGTTTCAATTCCTCATAGGTAGGCTAAAAACCAAATTGGCCAAACGAATGGGTTTAATGGTGGACTATGTTTCAATTCCTCATAGGTAGGCTAAAAACCATGGCCAGTGATACTTGTTCAGCTAAATGATACTCGTTTCAATTCCTCATAGGTAGGCTAAAAACATATTTGTTCCATCATAAGCTATTCCATACATATAATGTTTCAATTCCTCATAGGTAGGCTAAAAACGGGTATGCTGGGATTTCGGGAGCACTTGATTTTCGATGTTTCAATTCCTCATAGGTAGGCTAAAAACTTATCCAACATATTTTGCTGTTTGGTAAGTCTGTCTATGTTTCAATTCCTCATAGGTAGGCTAAAAACTAAAACATCCATTACTATTGAATCATGTATCTGTCCAAGTTTCAATTCCTCATAGGTAGGCTAAAAACGTGGACAAGGTTTCTTTGATACCATTCCAAGCATCTGGTTTCAATTCCTCATAGGTAGGCTAAAAACTCTTGGATTGGGAATATGTGTATCAATCCAATGAATTGTTTCAATTCCTCATAGGTAGGCTAAAAACTGGCTTTGTTGCGTATAGCACGCAGTGCTATGTCCATGTTTCAATTCCTCATAGGTAGGCTAAAAACTTATATCACCTCATTTCAAATAATTCAATATAGTAAAGTTTCAATTCCTCATAGGTAGGCTAAAAACGAACTTGGAACATTGAGTCATAATCTTAATGATGTATTGTTTCAATTCCTCATAGGTAGGCTAAAAACGGAAATGAAAAAGAAATAGGTCAACTTTTATTGGACATGTTTCAATTCCTCATAGGTAGGCTAAAAACCTCCAACTTGGCTGGATTCTTTTATACCCTTCACCAGGTTTCAATTCCTCATAGGTAGGCTAAAAACAAATCCATTCTGGTTTTGGGTTCTTCTTTGAACATTTGTTTCAATTCCTCATAGGTAGGCTAAAAACCCACTGATATTTCAGTATGAGATAAATTTTCATCCAAGTTTCAATTCCTCATAGGTAGGCTAAAAACGAACTACTTGGACTTGAACCACGCCATTCGCATCTGTGTTTCAATTCCTCATAGGTAGGCTAAAAACGGAATACTTTGTTTTAACTTATCATTCATCATAGCCATGTTTCAATTCCTCATAGGTAGGCTAAAAACCCCATATCGTAAAGCCAGCCCAAGCATTATTGTCGGTTTCAATTCCTCATAGGTAGGCTAAAAACTGCATAAGTCTTACCGCTGCCAGTCTGCCCAACAAGGTTTCAATTCCTCATAGGTAGGCTAAAAACTATTAACGGTACTGACGATGTTATACTCCAATTTGAGTTTCAATTCCTCATAGGTAGGCTAAAAACGCAATGGAGTAAAATAAAAATGAACAGTACAGGCGGTTTCAATTCCTCATAGGTAGGCTAAAAACCTAACTCCGTCGTATTCTGCTTTTTCTGTCTTTTTCTGTTTCAATTCCTCATAGGTAGGCTAAAAACCAGAGGCAGAACAAGTAGTTCAGTGGTTAAATGAAAAGTTTCAATTCCTCATAGGTAGGCTAAAAACTTTCCCCGCCGATGTGTCGCTATCATCAAAAGTAGCAGTTTCAATTCCTCATAGGTAGGCTAAAAACCCATCACATCTGTCAATATTGGCTTTATCTTGTTCAAGTTTCAATTCCTCATAGGTAGGCTAAAAACGAAATACTACTGATGCGGAAGCATCTGGAAATGGAACGTTTCAATTCCTCATAGGTAGGCTAAAAACATGCCTGCTTGTCTTTACCGAAGATGAATTTTATTGTTTCAATTCCTCATAGGTAGGCTAAAAAC

>NC_015520|2|2|2336692-2342216|CRISPRCasFinder
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGTTATCCGTCATAGTACCTCCCTGTTTTTTTATATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATAAACTTTTTGCGCCTTAAATTACCTTCCATAACTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATGGTAATATTTTGGATATTTTATCACCTTTGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTTTGCCTGCGCAACATCATCATGAAACGCTATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATGGTAATATTTTGGATATTTTATCACCTTTGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CATTAATAGCGTTATCTATAGAATTTTCTATATTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGAATCTAGTTTCACGCAAGAAAGGAAACCACGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCATCATATGGCATTGAAAATGAAAATGTTTCAGCATCATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAAAATCCATCAAGAATGGGAGTTGGGTTTATCATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATTCTGCCCTGGTCATCCCTCACGCTGTCATCGGGAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGATACATATCTTCATTTTCGGGTGAAGTAGCATC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAGCTAACCATGCTGTTACGCTTTTGTCGTATTCCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTCACCTTGGAACTTTATTTTATTGTCTCCAATTACA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCCAATTGTATATTTATATTATTTGGTATAGTCAAAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGTAACTGTTATTGGATTAGTTCCACCATTTTTTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTGGTGAATTTACAGACCCCACAAAGTTTATTGTGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGATTTGTCTGTAAATGAATTACAATGGATACTCA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATTAGAGTTTACTAATACGTTAGTATTAGTATTCTGTTTCAATTTCCCAATTTC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATGGCTGGAAGTATACTGCAAACCAAAATTAGCGCC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGATATATGCAAGGAGAATAGAAAGAGAGGGCAATGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGCTAATGTGCTACAAGAATGGCGCATGTGGAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAAATGGTATTCCGGCTATAAGAGCAGTAAAGACGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGTATAATGGCGGCTTATCCCATATGGCACTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTTTGGTTTCCCAGCTCCAGTTGTAATGCTTATTTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCGCCTGCTCTAAATCTAATCGCAGAAAGCCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CGACGATTACGTATAACATAGATAATGCGAAGTCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGTATTGGAATGGAAGTATTAACATACGAATTATC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAATCGCTGCTACTATCCAAGTGATTGGATTGGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATTCAATAAGGTCAAGGATGCTATAATAGCACCATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATGTAATATCTTGCGAAGTTAGTTTTGCGCTATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGAATATGTGAAACCAGTTCTAGAAGCCAAAGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGAGCGGCAAACAGGCATATGAAGCGGTAAAAGCCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCGCCAACTTCTTTTATTTTGTTCCATGTATTGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCGGGCGTGTGTACTACAGGTGTGGCCGCGGAGAATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGTATGACTACATATAGATTTCGTAATGATGGCTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATCCCATATATGGGTCATATATTCTTTGGCATCTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGCATAGCAAAAGCCGAAGAAAGAGAGGCGTTATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCCCGTTAAAAGGTAATAACAAAGATGTGTATTGTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAGCGCGCTTGGAAGTGTGCCTGCTATTCTTTATG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTCAGCATCTGGATTGTCGTATCCGAAATTTGCCTTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTCTATCCGTAACGCTTAATTTTAACCATCGCTCGAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATTACTATGTTATGATTGCCACAATAAGGAGCACAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATAAGCCGAGAACTTAACAATCTAATCCAAACCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGAGCAGCCGAATCGATATTTACTAGACATCGGCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGTAGCAGCTATATTAGAAAACTCTACAGAACTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATTTACAGCAGAAAGATAATGAACGTATTGCCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGAAATGGCTGATGTATTCATTCGGTCGGGCGATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCAATGTATTTTTTATTTCTCTTTCTATTATTATTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAGCAGATGTCAAAAAAGCAGATTTTGTAGTATTGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGGAGATGAGCATGGAAGGTTTGCTGTTAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTCTTTCATCACTAATCATTATGATTTGTAAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAATTGGCCAAACGAATGGGTTTAATGGTGGACTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CATGGCCAGTGATACTTGTTCAGCTAAATGATACTC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATATTTGTTCCATCATAAGCTATTCCATACATATAAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGGTATGCTGGGATTTCGGGAGCACTTGATTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCCAACATATTTTGCTGTTTGGTAAGTCTGTCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAACATCCATTACTATTGAATCATGTATCTGTCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTGGACAAGGTTTCTTTGATACCATTCCAAGCATCTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCTTGGATTGGGAATATGTGTATCAATCCAATGAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGCTTTGTTGCGTATAGCACGCAGTGCTATGTCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATATCACCTCATTTCAAATAATTCAATATAGTAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTTGGAACATTGAGTCATAATCTTAATGATGTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAAATGAAAAAGAAATAGGTCAACTTTTATTGGACAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTCCAACTTGGCTGGATTCTTTTATACCCTTCACCAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATCCATTCTGGTTTTGGGTTCTTCTTTGAACATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTGATATTTCAGTATGAGATAAATTTTCATCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTACTTGGACTTGAACCACGCCATTCGCATCTGT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAATACTTTGTTTTAACTTATCATTCATCATAGCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCCATATCGTAAAGCCAGCCCAAGCATTATTGTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGCATAAGTCTTACCGCTGCCAGTCTGCCCAACAAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TATTAACGGTACTGACGATGTTATACTCCAATTTGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCAATGGAGTAAAATAAAAATGAACAGTACAGGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTAACTCCGTCGTATTCTGCTTTTTCTGTCTTTTTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGAGGCAGAACAAGTAGTTCAGTGGTTAAATGAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCCCCGCCGATGTGTCGCTATCATCAAAAGTAGCA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATCACATCTGTCAATATTGGCTTTATCTTGTTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAAATACTACTGATGCGGAAGCATCTGGAAATGGAAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATGCCTGCTTGTCTTTACCGAAGATGAATTTTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC

>NC_015520|2|1|2336692-2342216|CRT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGTTATCCGTCATAGTACCTCCCTGTTTTTTTATATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATAAACTTTTTGCGCCTTAAATTACCTTCCATAACTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATGGTAATATTTTGGATATTTTATCACCTTTGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTTTGCCTGCGCAACATCATCATGAAACGCTATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATACTCCTGTGCCACTATCGCGCCCTTTCTCGAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATGGTAATATTTTGGATATTTTATCACCTTTGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CATTAATAGCGTTATCTATAGAATTTTCTATATTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGAATCTAGTTTCACGCAAGAAAGGAAACCACGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCATCATATGGCATTGAAAATGAAAATGTTTCAGCATCATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAAAATCCATCAAGAATGGGAGTTGGGTTTATCATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATTCTGCCCTGGTCATCCCTCACGCTGTCATCGGGAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGATACATATCTTCATTTTCGGGTGAAGTAGCATC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAGCTAACCATGCTGTTACGCTTTTGTCGTATTCCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTCACCTTGGAACTTTATTTTATTGTCTCCAATTACA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCCAATTGTATATTTATATTATTTGGTATAGTCAAAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGTAACTGTTATTGGATTAGTTCCACCATTTTTTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTGGTGAATTTACAGACCCCACAAAGTTTATTGTGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGATTTGTCTGTAAATGAATTACAATGGATACTCA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATTAGAGTTTACTAATACGTTAGTATTAGTATTCTGTTTCAATTTCCCAATTTC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATGGCTGGAAGTATACTGCAAACCAAAATTAGCGCC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGATATATGCAAGGAGAATAGAAAGAGAGGGCAATGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGCTAATGTGCTACAAGAATGGCGCATGTGGAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAAATGGTATTCCGGCTATAAGAGCAGTAAAGACGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGTATAATGGCGGCTTATCCCATATGGCACTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTTTGGTTTCCCAGCTCCAGTTGTAATGCTTATTTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCGCCTGCTCTAAATCTAATCGCAGAAAGCCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CGACGATTACGTATAACATAGATAATGCGAAGTCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGTATTGGAATGGAAGTATTAACATACGAATTATC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAATCGCTGCTACTATCCAAGTGATTGGATTGGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATTCAATAAGGTCAAGGATGCTATAATAGCACCATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATGTAATATCTTGCGAAGTTAGTTTTGCGCTATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGAATATGTGAAACCAGTTCTAGAAGCCAAAGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGAGCGGCAAACAGGCATATGAAGCGGTAAAAGCCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCGCCAACTTCTTTTATTTTGTTCCATGTATTGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCGGGCGTGTGTACTACAGGTGTGGCCGCGGAGAATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGTATGACTACATATAGATTTCGTAATGATGGCTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATCCCATATATGGGTCATATATTCTTTGGCATCTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGCATAGCAAAAGCCGAAGAAAGAGAGGCGTTATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCCCGTTAAAAGGTAATAACAAAGATGTGTATTGTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAGCGCGCTTGGAAGTGTGCCTGCTATTCTTTATG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTCAGCATCTGGATTGTCGTATCCGAAATTTGCCTTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTCTATCCGTAACGCTTAATTTTAACCATCGCTCGAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATTACTATGTTATGATTGCCACAATAAGGAGCACAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATAAGCCGAGAACTTAACAATCTAATCCAAACCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGAGCAGCCGAATCGATATTTACTAGACATCGGCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGTAGCAGCTATATTAGAAAACTCTACAGAACTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATTTACAGCAGAAAGATAATGAACGTATTGCCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGAAATGGCTGATGTATTCATTCGGTCGGGCGATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCAATGTATTTTTTATTTCTCTTTCTATTATTATTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAGCAGATGTCAAAAAAGCAGATTTTGTAGTATTGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGGAGATGAGCATGGAAGGTTTGCTGTTAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTCTTTCATCACTAATCATTATGATTTGTAAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAATTGGCCAAACGAATGGGTTTAATGGTGGACTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CATGGCCAGTGATACTTGTTCAGCTAAATGATACTC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATATTTGTTCCATCATAAGCTATTCCATACATATAAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGGTATGCTGGGATTTCGGGAGCACTTGATTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCCAACATATTTTGCTGTTTGGTAAGTCTGTCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAACATCCATTACTATTGAATCATGTATCTGTCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTGGACAAGGTTTCTTTGATACCATTCCAAGCATCTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCTTGGATTGGGAATATGTGTATCAATCCAATGAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGCTTTGTTGCGTATAGCACGCAGTGCTATGTCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATATCACCTCATTTCAAATAATTCAATATAGTAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTTGGAACATTGAGTCATAATCTTAATGATGTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAAATGAAAAAGAAATAGGTCAACTTTTATTGGACAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTCCAACTTGGCTGGATTCTTTTATACCCTTCACCAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATCCATTCTGGTTTTGGGTTCTTCTTTGAACATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTGATATTTCAGTATGAGATAAATTTTCATCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTACTTGGACTTGAACCACGCCATTCGCATCTGT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAATACTTTGTTTTAACTTATCATTCATCATAGCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCCATATCGTAAAGCCAGCCCAAGCATTATTGTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGCATAAGTCTTACCGCTGCCAGTCTGCCCAACAAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TATTAACGGTACTGACGATGTTATACTCCAATTTGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCAATGGAGTAAAATAAAAATGAACAGTACAGGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTAACTCCGTCGTATTCTGCTTTTTCTGTCTTTTTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGAGGCAGAACAAGTAGTTCAGTGGTTAAATGAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCCCCGCCGATGTGTCGCTATCATCAAAAGTAGCA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATCACATCTGTCAATATTGGCTTTATCTTGTTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAAATACTACTGATGCGGAAGCATCTGGAAATGGAAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATGCCTGCTTGTCTTTACCGAAGATGAATTTTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC

>NC_015520|2|1|2338045-2342216|PILER-CR
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAATGGCTGGAAGTATACTGCAAACCAAAATTAGCGCC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGATATATGCAAGGAGAATAGAAAGAGAGGGCAATGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGCTAATGTGCTACAAGAATGGCGCATGTGGAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAAATGGTATTCCGGCTATAAGAGCAGTAAAGACGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGTATAATGGCGGCTTATCCCATATGGCACTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTTTGGTTTCCCAGCTCCAGTTGTAATGCTTATTTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCGCCTGCTCTAAATCTAATCGCAGAAAGCCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CGACGATTACGTATAACATAGATAATGCGAAGTCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGTATTGGAATGGAAGTATTAACATACGAATTATC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAATCGCTGCTACTATCCAAGTGATTGGATTGGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATTCAATAAGGTCAAGGATGCTATAATAGCACCATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATGTAATATCTTGCGAAGTTAGTTTTGCGCTATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGAATATGTGAAACCAGTTCTAGAAGCCAAAGCCGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGAGCGGCAAACAGGCATATGAAGCGGTAAAAGCCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCGCCAACTTCTTTTATTTTGTTCCATGTATTGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCGGGCGTGTGTACTACAGGTGTGGCCGCGGAGAATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGTATGACTACATATAGATTTCGTAATGATGGCTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATCCCATATATGGGTCATATATTCTTTGGCATCTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTGCATAGCAAAAGCCGAAGAAAGAGAGGCGTTATA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCCCGTTAAAAGGTAATAACAAAGATGTGTATTGTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAGCGCGCTTGGAAGTGTGCCTGCTATTCTTTATG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTCAGCATCTGGATTGTCGTATCCGAAATTTGCCTTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATGGCAAAGCACGGCTTATCTGTTATGCAAGAGC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTCTATCCGTAACGCTTAATTTTAACCATCGCTCGAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATTACTATGTTATGATTGCCACAATAAGGAGCACAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AATAAGCCGAGAACTTAACAATCTAATCCAAACCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AGAGCAGCCGAATCGATATTTACTAGACATCGGCGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGTAGCAGCTATATTAGAAAACTCTACAGAACTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATTTACAGCAGAAAGATAATGAACGTATTGCCTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGAGGAAATGGCTGATGTATTCATTCGGTCGGGCGATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCAATGTATTTTTTATTTCTCTTTCTATTATTATTA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAGCAGATGTCAAAAAAGCAGATTTTGTAGTATTGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATAGGAGATGAGCATGGAAGGTTTGCTGTTAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTCTTTCATCACTAATCATTATGATTTGTAAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAAATTGGCCAAACGAATGGGTTTAATGGTGGACTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CATGGCCAGTGATACTTGTTCAGCTAAATGATACTC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATATTTGTTCCATCATAAGCTATTCCATACATATAAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGGTATGCTGGGATTTCGGGAGCACTTGATTTTCGAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATCCAACATATTTTGCTGTTTGGTAAGTCTGTCTAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TAAAACATCCATTACTATTGAATCATGTATCTGTCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GTGGACAAGGTTTCTTTGATACCATTCCAAGCATCTG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TCTTGGATTGGGAATATGTGTATCAATCCAATGAATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGGCTTTGTTGCGTATAGCACGCAGTGCTATGTCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTATATCACCTCATTTCAAATAATTCAATATAGTAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTTGGAACATTGAGTCATAATCTTAATGATGTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAAATGAAAAAGAAATAGGTCAACTTTTATTGGACAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTCCAACTTGGCTGGATTCTTTTATACCCTTCACCAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	AAATCCATTCTGGTTTTGGGTTCTTCTTTGAACATTT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCACTGATATTTCAGTATGAGATAAATTTTCATCCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAACTACTTGGACTTGAACCACGCCATTCGCATCTGT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GGAATACTTTGTTTTAACTTATCATTCATCATAGCCAT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCCATATCGTAAAGCCAGCCCAAGCATTATTGTCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TGCATAAGTCTTACCGCTGCCAGTCTGCCCAACAAG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TATTAACGGTACTGACGATGTTATACTCCAATTTGA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GCAATGGAGTAAAATAAAAATGAACAGTACAGGCG
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CTAACTCCGTCGTATTCTGCTTTTTCTGTCTTTTTCT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CAGAGGCAGAACAAGTAGTTCAGTGGTTAAATGAAAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	TTTCCCCGCCGATGTGTCGCTATCATCAAAAGTAGCA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	CCATCACATCTGTCAATATTGGCTTTATCTTGTTCAA
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	GAAATACTACTGATGCGGAAGCATCTGGAAATGGAAC
GTTTCAATTCCTCATAGGTAGGCTAAAAAC	ATGCCTGCTTGTCTTTACCGAAGATGAATTTTATT
GTTTCAATTCCTCATAGGTAGGCTAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015520.1\|WP_013781811.1\|2353850_2354609_-\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NC_015520.1\|WP_013781808.1\|2351413_2352412_-\|DNA-double-strand-break-repair-nuclease-NurA	unknown	unknown	gnl\|CDD\|370456
NC_015520.1\|WP_013781799.1\|2332557_2332821_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NC_015520.1\|WP_013781800.1\|2332824_2333820_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_015520.1\|WP_013781809.1\|2352709_2352988_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131898
NC_015520.1\|WP_013781798.1\|2331714_2332530_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NC_015520.1\|WP_013781795.1\|2330357_2330720_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013781804.1\|2345719_2346637_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NC_015520.1\|WP_041644599.1\|2328988_2330221_-\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	unknown	unknown	gnl\|CDD\|274853
NC_015520.1\|WP_013781797.1\|2331125_2331503_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013781796.1\|2330735_2331107_-\|DUF2089-domain-containing-protein	unknown	unknown	gnl\|CDD\|378280
NC_015520.1\|WP_013781792.1\|2327100_2327829_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226927
NC_015520.1\|WP_013781802.1\|2342439_2344887_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_015520.1\|WP_049783359.1\|2353006_2353882_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223390
NC_015520.1\|WP_013781805.1\|2346629_2348597_-\|TIGR02556-family-CRISPR-associated-protein	cas8b1	pfam09484_cas8b1_CAS-I-B	gnl\|CDD\|378190
NC_015520.1\|WP_013781801.1\|2333834_2334335_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_015520.1\|WP_171805006.1\|2349544_2351398_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NC_015520.1\|WP_013781806.1\|2348589_2349360_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NC_015520.1\|WP_013781793.1\|2327825_2328992_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NC_015520.1\|WP_013781803.1\|2344907_2345675_-\|CRISPR-associated-protein-Cas5	cas5	cd09692_cas5_CAS-I-B	gnl\|CDD\|187823

Protein	Function_ID	Function_description	E-value
NC_015520.1\|WP_013781808.1\|2351413_2352412_-\|DNA-double-strand-break-repair-nuclease-NurA	gnl\|CDD\|370456	pfam09376, NurA, NurA domain. This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.	8.17525e-19
NC_015520.1\|WP_013781799.1\|2332557_2332821_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.07192e-34
NC_015520.1\|WP_013781803.1\|2344907_2345675_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|187823	cd09692, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.16503e-34
NC_015520.1\|WP_013781809.1\|2352709_2352988_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	2.01295e-16
NC_015520.1\|WP_013781798.1\|2331714_2332530_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	7.66707e-74
NC_015520.1\|WP_013781800.1\|2332824_2333820_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.79382e-162
NC_015520.1\|WP_013781804.1\|2345719_2346637_-\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.98962e-69
NC_015520.1\|WP_041644599.1\|2328988_2330221_-\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	gnl\|CDD\|274853	TIGR03918, hydrogenase_maturation_GTPase_HydF, [FeFe] hydrogenase H-cluster maturation GTPase HydF. This model describes the family of the [Fe] hydrogenase maturation protein HypF as characterized in Chlamydomonas reinhardtii and found, in an operon with radical SAM proteins HydE and HydG, in numerous bacteria. It has GTPase activity, can bind an 4Fe-4S cluster, and is essential for hydrogenase activity. [Protein fate, Protein modification and repair].	0
NC_015520.1\|WP_013781811.1\|2353850_2354609_-\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	1.39283e-86
NC_015520.1\|WP_013781796.1\|2330735_2331107_-\|DUF2089-domain-containing-protein	gnl\|CDD\|378280	pfam09862, DUF2089, Protein of unknown function (DUF2089). This domain, found in various hypothetical prokaryotic proteins, has no known function. This domain is a zinc-ribbon.	4.96839e-57
NC_015520.1\|WP_013781792.1\|2327100_2327829_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226927	COG4555, NatA, ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism].	1.11245e-111
NC_015520.1\|WP_013781802.1\|2342439_2344887_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	3.72396e-54
NC_015520.1\|WP_049783359.1\|2353006_2353882_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	7.01362e-130
NC_015520.1\|WP_013781805.1\|2346629_2348597_-\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	2.62471e-142
NC_015520.1\|WP_013781801.1\|2333834_2334335_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.05114e-67
NC_015520.1\|WP_171805006.1\|2349544_2351398_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	4.28109e-34
NC_015520.1\|WP_013781806.1\|2348589_2349360_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	3.7639e-35
NC_015520.1\|WP_013781793.1\|2327825_2328992_+\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	4.38654e-40

>NC_015520.1|WP_013781801.1|2333834_2334335_-|CRISPR-associated-protein-Cas4
MEDVDINGTLIWYYYICPRETWLMARHLTPDEHDENIEWGRFLHEHSYERDKKEIAVGNIKIDLLEKDDGGLVIGEVKKSSKYLQSARMQLLFYLSELKKLGIEAEGQLMFPEEREIIDVRLDQEAQVELDRACAAIADIVSAELPPQPARVHWCTSCAYAEMCWA
>NC_015520.1|WP_013781800.1|2332824_2333820_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKSFYIFSSGEFERKDNTVYFKSEAGSKYIPIEDISEIMIFGEVNFNKRFIEFLSQKEVLLHFFNHYGYYTGSFYPREHLNSGYMILKQAEYYMDVDKRLCLARHFVQGATDNIQHVLKYYINRGRDSLQAISDEIDKLYAITYECTGVEELMAIEGNIRDQYYKGFDTIIDKPAFAFEQRTRRPPQNRMNTLISFGNSIIYTLVLSEIYKTHLDPRIGYLHTTNFRRFTLNLDVAEIFKPILVDRAIFTLLGKNMITANDFQSYADGIVLKEKAQKAFVTELDKRFATTINHRDLHRQVSYRSIIRMELYKLEKHFMGEKEYSPFVSRW
>NC_015520.1|WP_013781799.1|2332557_2332821_-|CRISPR-associated-endonuclease-Cas2
MFVILVYDVNQSRVAKVLKLCRRYLYWVQNSVLEGELTEAGYKKLKYELSKIINKDEDSVIFYTFRSTKYSNREIMGLEKGGQENIL
>NC_015520.1|WP_013781798.1|2331714_2332530_+|Cof-type-HAD-IIB-family-hydrolase
MQYELIVADMDGTLLNDKKEISPKNREYIEKYRKAGGLFTIATGRGRPAVEDIVKEININIPVIVYNGAQLYDFRNKKAIYEAFLDQKAYTMALVLLHKLNITFLAYQGPHMWVERISPVILKHLAKENIKINNVTAASIDTFPTEGINKILTITEQSDFDEFAMLFSQAGLTGVRFVQSEVNYFEILPEGVSKGHALEELAAYLDIPLSQTAAIGDHMNDIEMLRAAGLGVAMANARDEVKRCARFITKSNNDDGVAYFIELLLKDQIPN
>NC_015520.1|WP_013781797.1|2331125_2331503_-|hypothetical-protein
MYIIEILESIERGEITPEKGAALIRRHPRRRMKSCFIKIAVNTDDVHINYIPPLPIIIIKGLVNLVFGIYHVVEFFMPDGTGHWLNGVNARDINAFLSELSRCGHTDIVDINAEGGRTHVLIRAI
>NC_015520.1|WP_013781796.1|2330735_2331107_-|DUF2089-domain-containing-protein
MENTVIGVCPICGQRLEVSALHCPKCDTEVKGHFHLCKFCYLTKEQRYFAEVFIKCRGNIREVEKELGISYPTVKSRLENLVEAMGYKDKVVRPNKDEHMEILRQLDDGEIDAETALNILKNL
>NC_015520.1|WP_013781795.1|2330357_2330720_-|hypothetical-protein
MDSDERLMILKMLQDGKITAEQGAELLSAVDDSDHIQKTNAKNKMLHVRVFDQSENTKVNVNVPLSMLKVALKLGNKFAKDSMPEDIDLEEIAKALEDGSEGKIVDIDSGDGQKVEIYVE
>NC_015520.1|WP_041644599.1|2328988_2330221_-|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF
MNTTPTSSRMHIAIFGRRNAGKSSIINAITNQKAALVSDVAGTTTDPVSKAMELLPIGPVVIIDTAGLDDIGPLGEMRIQRTYDVLNRTDLAVLVIDGEVGLTDFEENILRRIREKNIPVVGAVNKADKAVYTQEQLKEWEKKLKLELVEVSAATGQGIDELKMAIVRHAPYDDEKLTLIGDLISPGDLVVMVVPIDKAAPKGRLILPQQQVIRDVLDHDGMAVVVKEDRLRDALTGLSSKPRLVVTDSQVFQKVAADTPRDIPLTSFSILMARYKGDLIELAKGAKAVADLRPGDSVLIAEGCTHHRQSDDIGTVKIPRWLRQTVGGDLNFQWSSGLTMPEDLSRFKLIVHCGACMLNRREMLYRMEKARQQDVPMVNYGVLIAYVNGILPRALEPFPVARTMFQEDYA
>NC_015520.1|WP_013781793.1|2327825_2328992_+|ABC-transporter-permease
MKRTWIVFAKEMKDAFRDRRTLIFSILLPALIFPILMTFMNNTISNVTEEATENITIAYIGEDSQLKAYLDSLPNVTIMDSQDPEADLDDSKVSVIVEVKDGFDEAIASGAKGDVTLKYDESKAKSSMAASVIRESINAFGTQLARQRLQAKGIDPEFIEPLNIASVNVAKAQGTGAIIMSFLLPMFLLLYPATGAMATAIDQGAGEKERGTLEPLLATQVSRTALAMGKWLSTSAASIIGTIAFMAGFVVAVIYNPTMFGEGFTATPSAVVAITVLGIMMAFIYSAAMLAMSVFARNIKEASTYLSPFVIVAMIPAYATMYTDIKTVPTWQYNVPLLNVILIVKEALLDSINWGHFAITMLWLIALTVLFLAMVVRMFNNESVVFRS
>NC_015520.1|WP_013781792.1|2327100_2327829_+|ATP-binding-cassette-domain-containing-protein
MVKLISLGKRFKEVQAVDDLSFEVKGGEIFGLLGENGAGKTTTLRMLATMLKPTSGTASICDLDIVKQPSEVRKHIGILFGGEAGLYDRLTARENIAYFGKLNGMDDNALKKRIDELSQTLDMEEFIDRRVGKFSKGMKQKVTIARAIVHDPEVMLLDEPTVGLDVTAARTLQDFIAQCRDQGKAVIFSSHIMSEVERLCDRIGIIHKGRLVDIGTIDGLKQQYNNSNLEEVFIQLIGGKSA
>NC_015520.1|WP_013781802.1|2342439_2344887_-|CRISPR-associated-helicase/endonuclease-Cas3
MEFYSHITKDEQGNITRKKLLENHLREVAAQMERSIVGMPIDGAADVAKAAYLMGISHDFGKFTTYFQRYLLHGSKDGSLHFHGFISAVFVGYVMQKFWHSDKPHETYMPLISYFFVLHHHGNLGSLEDDVLTKSLLKGGAYATDKRWSDKINIFKTQLDDIKLHVHDIEQCYRDLGVDISVNEFIANWEDILRKLDLQRYKLMNKESSDVRIRVLMLGLMMYSELIDNDKMDAAQVEISQRKVLPADIIDTYRMKKFKNPAKPLDEMRNSIYQSVMSSIENAPLSQHLFTLTAPTGSGKTLTGLSAALKLRARIEQRLGYSPRIIYSLPFTSIIDQNYDVIKEILSQMDDFNGNEGLYLVKHHHLSELSYTRQGEEEPLDKALMLIESWQAEIVVTTFIQLFYTLVGYRNKFLKKYHNIIGSIIVLDEIQNVGVEYWPLINKVMNIMASEMGCYIILMTATKPLIFEDGSSMELVKAPEQYFKKLDRVSLLPIPITMTVDEMADKFMDIYDGEHSYLVVMNTIKSSIQLYDLIKDRIDIPILYLSTNIIPKHRNQRIKEIKEHTDRHEPIVVISTQVVEAGVDIDMDVVMRDIGPVDSIIQVAGRCKRSSMDDDGKVYVYKLVDKKDEGKGETLLAKRIYGSIHCMLALKMLERGTISEHAFYDMINEYFNELTFSESQQISDDIWEAFEHLRFSKDESDIVTVSSFSLIDNRPNYADVFIEIDDEARDIWEAYSENVLAQNDEAKRREARLRFKGKLDAYIISVPDKLAMGLQPNMAVSKDKTFWRLPLEGLDLFYDIETGFKRSLDMEVWMA
>NC_015520.1|WP_013781803.1|2344907_2345675_-|CRISPR-associated-protein-Cas5
MTENGLLVFDVKGLMAHFRKYYTNSSSLSYAFPPRTAAAGMIAAVLGYERDSYYELFDTVRCGIGISVKTNIRHMTQTVNYVRTKGPRELNGSFGPTQVPLDIILPAVNESMLVYRIYFWHDDQTVMSKLKELIWDGRTDYPLYMGISEFIAFSQPVAYVPGSDIREIEPGEMIDLATVCNVENIANGGLAFESPDGQAMQYIKERMPISFGDNRQLKSFGSFLFEKNRCVIRAKLKVPCYRIDYNGHVENIVFM
>NC_015520.1|WP_013781804.1|2345719_2346637_-|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MNNSELLFIYDAKMCNPNGDPDDENRPRMDYERQRNLVSDVRLKRYIRDYLEDRGYGIFVSKQDDKVVDADARLKNVVGKSKVTIEDLPTILDKLIDVRMFGATMPIKAEEGARGGSSITLTGPVQFTWGYSLNKVNLVDSNGITSHFSSRTENQQGAMGKDYRVYYSLLAFQGIISAKRAARTQLKDDDIALLDEAMLKAIPLQATRSKIGQYPRLYLRVEYTDGQTFLGDFRDMVSLETLDGLRDTTEARLKASVLAHKLSANSSRIARIYWWQDEELTVSDSSDGTISGLFGEDLKDKLEKL
>NC_015520.1|WP_013781805.1|2346629_2348597_-|TIGR02556-family-CRISPR-associated-protein
MLEAIKKLGDVAMSSGQDFLEALALPVGAKRGDKDQYLVIIKIDTQDASVNFQPVKIDDYTAQRYIWVGNADGSASPQWYATTNNLGFIVGQAIPNLIKKLPDNTSLKVALQDVLDNMYYDLGPQSGAKSRYRYVWDLGKMGMAEAIGVTTADIYKELINKGDDIKKMPDRLASAVLDYIKNKTAGAIKRDDIALWTLQIDGKLVVDDRAYREAVEREKIDVIYQDAIDGICSACGKADKVTDNTTKLTFKYYNTDKIGFSSYISGRFDKSFVLCKDCYMALLEGEAYIKNRFNTRLGGLNLYLIPSFIFDVSFTADQLDEWTKYINDSFNSAKTASSIEDFEKRIKDDYMEYEDDKNNYILNLMFYQRNQAELKVLKLIKDVPPSRFTQLRFASEMTGHFGDAIFGPSPMWQIDLNKIYYLIPINVGRNSIEYRKLLDIYDDIFSGKPVSYEFLIDSFVELARIYRLESFVNVNVRIPNDTDMAMVYAMAQANLFMEYLKQLKLLERGVSMDSDKLILREDIKGYIEEMGYDEPKTALFLLGYLIGQVADGQRGSGMDSKPVLDKLNYQGMTKLRVWRLSDEIFEKLRQYKRLAYNEGIFAQHRMLMEKYMSDWPLTDQENVFYILSGYAYNTLAAIKAAKERNNNNEEVVINE
>NC_015520.1|WP_013781806.1|2348589_2349360_-|CRISPR-associated-endoribonuclease-Cas6
MRVCYEFESDKPVKLPIQYNHILQGLIYDHISDAALKHFLHEEGFDINNRRYKMFTFSRLEGAFNMNRDKGVIEFKPPLKLTLSSAMEVFIENLSEAFMKSDRLNLAGQPLSLSSIKVIPPPHIDGRVKVKMLSPVVAYSTAKNMERTITYYYSPMEDNFSRIIEQGLHRKYQLIYNRRLPEPKLTMRPIGRIDDRYMKVIEYKGTVIKGWMGIYWLDGSPELIKVAYDSGIGSKTSMGFGCFDIIQTEKGGERNA
>NC_015520.1|WP_171805006.1|2349544_2351398_-|ATP-binding-protein
MQVVGLTTQQEVWVASKDKPFRINQMLIIEDQFQGPQRGEVVETNSYNRFIPLNINGGGMVDASILESLKQLGYNIGQDTIHLAKVRLVVEAQYPIQTGCAARTPRFDEVSDLMVTVSPQEGLILGVIKSSDEVAEDMPPGLKDIALLYEGGKARPQNGVPFIFDIKAMQQYPHIGVFGGSGSGKSFGMRVMLEELMKLRIPVLVLDPHLEMDFSTRASGLPDGWEVDYSANFRRLNIGQDIGVAFDKLSNADLKNLLGASSPLSESMANAVETLHKRSDSYQTFSDRLDMLDEALEDTEAGLRAKLESADNQYQRQRYEQCIELRRTYRDLPLASVRAISWRLRRLFNDGLFSHDIQPVEEGLKQGKLMVIQGSSQMINVFGTYLLNNLYHKRRDYKDAQARGMGADYFPPFIVVADEAHNFAPKGYDTPAKTVLKEIAQEGRKYGTFLILATQRPTSLDENITAQLNTKLVFRTVRSIDIATIKEETDITLEEARRLPYLPSGDAFVSSAIIGRTVPIRVRMARTASPHNKNPFDELKDIFDKQEQELLRYIEDKLPIYDADMLQKAAEIERDSNGAYTFTVDQLKDLLDRLVQQGRIIGRNSVLGYIYDKPEGK
>NC_015520.1|WP_013781808.1|2351413_2352412_-|DNA-double-strand-break-repair-nuclease-NurA
MLDIEKELKDKLLKFNDTLKKRYKNGSGFNITLLNLLEQHVGRLTKLPSIAPQQVAAIAPKGIVAVDGSINTAGSSYPHYVAVMRSMAQSTFACYEPIYKYEIYSPLFEDKNVDINVEVDGVPAAVQDENRRSAHMACLEVEAAIEAIECMAPSVLMMDGSLAQFRIKCRDTWEKLYNLALERDVLLIGVVEEIKTAIIKQALNDYLPDDMKDMYDRELMFGILSPGQMLAINEDCLGQGKLGLAACFMRMSMDPHPIAMDMPAEQSDHMEDMAALVYALTPQDGRGIPLWLDMVDNQVRITNQMMEALIDEYIDADLRHRLLVAKRQNRDI
>NC_015520.1|WP_013781809.1|2352709_2352988_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MKSTGIVRKVDELGRVVIPIELRRTLNISQRDALEIYVDGEHIILKKYEPACIFCGDAADVQPYKGKNICKNCLAEIADEFGDKKEAADESK
>NC_015520.1|WP_049783359.1|2353006_2353882_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MAWRCQTVVDEQKSAKPGCLYICGTPIGNLEDITLRALKVLQNVDYIAAEDTRQTLKLLNHYDIHKTLISCHEHNEKQRAEEIVNLMSEGFSVALVTDAGMPVTSDPGSVVVEAVHRAGMPVSVIPGPTAVSAALALSGFSGDRYVFEGFLPRNKKERRSRLEALKYERRTVVLYEAPHRLLTTLDDLSVWLGDRPVAVVREITKIHEQVLRGTIGEMIMHFKDIQPRGEFVLVLKGYEGAEVQDADDGMTVEQRISAYMQRGMSKKDAIKQVAADTGLPKNEVYKKALLL
>NC_015520.1|WP_013781811.1|2353850_2354609_-|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MDIELKEGERLDDLQCGGLKIIQNPRLFSFGIDAVLLANFARIKPGDIVADLGTGSGVIPLLLSCKTAASKIYGLEIQHEMADMAQRSVRLNDLESRVDIIEGDIRKAGDIIGMSLVDAVISNPPYRKAGSGHVSPSDARAIATYELECTLDDVIKAASTLLKNKGRFYMIQRPARLVDAICGMRKAGIEPKRLRMVQPFADKKPTMFLIESIKGAQPHMDIMPPLVIYDAKGIYTEEIYRIYGMEVPDSGG

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Crispr_ID: NC_015520_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015520_3

2645347-2645438

Orphan

Consensus_repeat	Method
CTTGGAAGGGGTTAAGTTATTTTCGTAGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_015520_3

>merge|NC_015520|3|2645347-2645438|CRISPRCasFinder
CTTGGAAGGGGTTAAGTTATTTTCGTAGTAAGGAGCAAGCCTTCCAAGAGTCTTTGAGGTCTTGGAAGGGGGTTAAGTTATTTTCGTAGTAA

>NC_015520|3|3|2645347-2645438|CRISPRCasFinder
CTTGGAAGGGGTTAAGTTATTTTCGTAGTAA	GGAGCAAGCCTTCCAAGAGTCTTTGAGGTC
TTGGAAGGGGGTTAAGTTATTTTCGTAGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_015520.1\|WP_013782089.1\|2639157_2640216_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238899
NC_015520.1\|WP_013782100.1\|2654415_2655639_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|289946
NC_015520.1\|WP_013782084.1\|2632217_2633171_-\|transposase	unknown	unknown	gnl\|CDD\|376980
NC_015520.1\|WP_041644142.1\|2636779_2637565_-\|ABC-2-family-transporter-protein	unknown	unknown	gnl\|CDD\|226953
NC_015520.1\|WP_013782098.1\|2652873_2653539_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782085.1\|2635975_2636776_-\|ABC-2-family-transporter-protein	unknown	unknown	gnl\|CDD\|226218
NC_015520.1\|WP_013782091.1\|2641323_2642184_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NC_015520.1\|WP_013782083.1\|2631151_2632168_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213234
NC_015520.1\|WP_013782097.1\|2652134_2652752_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782092.1\|2642839_2643610_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NC_015520.1\|WP_013782093.1\|2645543_2646413_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NC_015520.1\|WP_013782102.1\|2657507_2658254_+\|ion-transporter	unknown	unknown	gnl\|CDD\|366146
NC_015520.1\|WP_013782088.1\|2638210_2639161_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238362
NC_015520.1\|WP_013782099.1\|2653544_2654279_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782103.1\|2658405_2658906_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_171804983.1\|2637647_2637917_+\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782096.1\|2650523_2651915_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379519
NC_015520.1\|WP_013782101.1\|2655638_2656721_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|99707
NC_015520.1\|WP_013782094.1\|2646469_2647546_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NC_015520.1\|WP_013782090.1\|2640226_2641327_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|180714

Protein	Function_ID	Function_description	E-value
NC_015520.1\|WP_013782089.1\|2639157_2640216_-\|hypothetical-protein	gnl\|CDD\|238899	cd01918, HprK_C, HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria. It catalyzes both the ATP-dependent phosphorylation of Ser-46 of HPr and its dephosphorylation by phosphorolysis. The latter reaction uses inorganic phosphate as substrate and produces pyrophosphate. Phosphoenolpyruvate carboxykinase (PEPCK) and the C-terminal catalytic domain of HprK/P are structurally similar with conserved active site residues suggesting these two phosphotransferases have related functions. The HprK/P N-terminal domain is structurally similar to the N-terminal domains of the MurE and MurF amino acid ligases.	0.000392324
NC_015520.1\|WP_013782084.1\|2632217_2633171_-\|transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	4.1411e-15
NC_015520.1\|WP_041644142.1\|2636779_2637565_-\|ABC-2-family-transporter-protein	gnl\|CDD\|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	7.80311e-29
NC_015520.1\|WP_013782085.1\|2635975_2636776_-\|ABC-2-family-transporter-protein	gnl\|CDD\|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	8.35775e-30
NC_015520.1\|WP_013782091.1\|2641323_2642184_-\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	5.21993e-25
NC_015520.1\|WP_013782083.1\|2631151_2632168_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	4.73038e-118
NC_015520.1\|WP_013782100.1\|2654415_2655639_-\|VWA-domain-containing-protein	gnl\|CDD\|289946	pfam13203, DUF2201_N, Putative metallopeptidase domain. This domain, found in various hypothetical bacterial proteins, has no known function. However, it is related to pfam01435.	8.68511e-66
NC_015520.1\|WP_013782092.1\|2642839_2643610_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	8.24295e-83
NC_015520.1\|WP_013782093.1\|2645543_2646413_-\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	9.32164e-33
NC_015520.1\|WP_013782088.1\|2638210_2639161_-\|hypothetical-protein	gnl\|CDD\|238362	cd00688, ISOPREN_C2_like, This group contains class II terpene cyclases, protein prenyltransferases beta subunit, two broadly specific proteinase inhibitors alpha2-macroglobulin (alpha (2)-M) and pregnancy zone protein (PZP) and, the C3 C4 and C5 components of vertebrate complement. Class II terpene cyclases include squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY), these integral membrane proteins catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. The protein prenyltransferases include protein farnesyltransferase (FTase) and geranylgeranyltransferase types I and II (GGTase-I and GGTase-II) which catalyze the carboxyl-terminal lipidation of Ras, Rab, and several other cellular signal transduction proteins, facilitating membrane associations and specific protein-protein interactions. Alpha (2)-M is a major carrier protein in serum and involved in the immobilization and entrapment of proteases. PZP is a pregnancy associated protein. Alpha (2)-M and PZP are known to bind to and, may modulate, the activity of placental protein-14 in T-cell growth and cytokine production thereby protecting the allogeneic fetus from attack by the maternal immune system.	2.54912e-06
NC_015520.1\|WP_013782102.1\|2657507_2658254_+\|ion-transporter	gnl\|CDD\|366146	pfam00520, Ion_trans, Ion transport protein. This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.	1.80941e-12
NC_015520.1\|WP_013782096.1\|2650523_2651915_-\|HNH-endonuclease	gnl\|CDD\|379519	pfam14239, RRXRR, RRXRR protein. This domain is found in bacteria, eukaryotes and viruses, and is approximately 180 amino acids in length. It contains a conserved RRXRR motif. It is often found in association with pfam01844.	3.54853e-75
NC_015520.1\|WP_013782101.1\|2655638_2656721_-\|ATP-binding-protein	gnl\|CDD\|99707	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.	3.90491e-15
NC_015520.1\|WP_013782094.1\|2646469_2647546_-\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	5.87187e-24
NC_015520.1\|WP_013782090.1\|2640226_2641327_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|180714	PRK06827, PRK06827, phosphoribosylpyrophosphate synthetase; Provisional.	1.17921e-169

>NC_015520.1|WP_013782092.1|2642839_2643610_-|ATP-binding-protein
MIDFEKARTHLEELGLSNAASLLDALLEKAQHRNSTYVDFLNDLLEAELVERQRRNMEVRTKLARLPYKKTLEEFDFTFQPSIDEKAIKELATMAFVHREENVIFLGPPGVGKTRLAVGLAMEALSQGISVYFSSLIRLIEDLKKAYEENRLEKRMRIYTRPKLLIIDEVGYLPLDGLGSNLFFQLISARYERGSIILTSNKGFGECGELMGDPVLATAVLDRLLHHAHIINIRGNSYRLKDRLKAGLYASQRDNA
>NC_015520.1|WP_013782091.1|2641323_2642184_-|radical-SAM-protein
MNCCFVPLKKGIRLQWDITNRCNLKCIHCCASKEEVEEPTTVEYIDRVVDILAKNDVMKVTISGGEPTLNKMLYYIVSKLKEAGIKVGIVTNLYYDYTLIEPLIDKLDSITTSIDGPADIHNNIRGQNCYDTILHNILRIIRVKNVKVITTLSKLNYGHIEETVSCLAGIGVKNIMCAYITPRGKGALNKEMLELQIDKNKIENQIQRLSEKYGVNISSSVCSHYFKSLDNQCLAANKIFYLSASGTLHPCHLYTEYGISIFEDQCFDLVRNWYHNSHILGEEVKS
>NC_015520.1|WP_013782090.1|2640226_2641327_-|ribose-phosphate-diphosphokinase
MNGEYSGNLGIISMPGTKKFCSKIDFYLKQWRETDHTFIIDAEYPRFSSGDGKVVLTESVRGKDIYIVSDPYNYSITYKMRGIDTNMSPDDHYQDIKRVISAINGKAWRISVIMTMLYGSRQHARNCRESLDCAVALRELENLGVKNIITFDAHDPRVQNAIPLTSFDNLYPNYQMMKALVRNVGDISIDPSRMIVVAPDAGGIQRCLKLAESLNLNIGMFYKRRDTTHVTEGHNPILFHKFLGDNLFGKDVIIVDDIMDTGESLIDSFTELKRGGAKRVFAFITFGMFTNGYECFEVAYRNHLFDKIFVSNLIYRQEEHIAREWLVDVDLSKYAAYIIESINKEISISKILDPKTKISKLIESLK
>NC_015520.1|WP_013782089.1|2639157_2640216_-|hypothetical-protein
MSRKYYLGVLDSCIEVCSNCSETFMSAIFDSLPHIAGLILQEELRLYQKLFTVNLWLCSKDVIAQRRNILSGQPKQIVVHGGSNQDLYKTAQLYQGKDKDTYLFDEDDCIVEKRNDLHYLDCYFANLKSWIPRYILKSIIMEYFFSQGYVEMHCSAIDYGGKAVLFIGSKGSGKTTALLSLLAYNHSAKIISNDRSLLKYNPEAECIDVISVDSTIRIGTGTYKAIFDSYKDNAFLDCLRQAKKVGNKLNVSFEELSDFVCIEPVKVSAIVACSLDLNCCSEIENNDHAVGLYDYLFEDDNEHPNWLHIFSRRNGLAENEIMNSRIQYFTAKIGFDIREFAVKFYECMGGGI
>NC_015520.1|WP_013782088.1|2638210_2639161_-|hypothetical-protein
MSELLYKKSMEIINDYYPSLLEEYYQNAMKVPQYIFNHIFRIVLQVNDTVHISKMYRKLLEKQLPSGGWGSLQSNSEGLYGITATALQLLFWTIDRLRNDESSVKIIEDSIARGIDYLLRTDGDEYWVEKNSSDRKHGILDLNHYILQCLYYALNYENGSDKKFQKGETAYWYDKLSNFYLRTQEEDGGWHEIGKPRSRVGTTSDALRALLPNKKYVKYIGRGILFIIHNQNPYYGYWDAGNLDKCFDASKALINSVWANDNIFTSLDSIDKGLDYILTYDVDRMNFEEKCDLMTILIDYVDLYKGKKYFMAKKFF
>NC_015520.1|WP_171804983.1|2637647_2637917_+|hypothetical-protein
MLTVIMPNYIVVEIPTALSVTTAIGIVSHDAINRALSAIGDDLTKIIMRYYPSVGFYIRSMILEFTNYGSNTWVLRNAICGIIQSCKGI
>NC_015520.1|WP_041644142.1|2636779_2637565_-|ABC-2-family-transporter-protein
MYIELLKKSFQQQFVYRTNTTIHVFTSFIYLFVTVNIWTALYRGKGIIDGISLKEMVTYVLMVQFVTTIVRLPVSKYVAGRASSGIISIDFIRPVNLKFCAIFDCLGGALFNVIVFVVPIVVLGSMMWGIVLPSQLYQWLLFVPSLFMAIILYSTMEYIMGLTAFWTKTDFHISWIVRSFMTLFSGSYIPLWFYPEPLKVIANFLPFQYFIFKPINIFMGKATFEEALFIILFQIIWFLILLTLECITWYFARKVVTVQGG
>NC_015520.1|WP_013782085.1|2635975_2636776_-|ABC-2-family-transporter-protein
MEYMSLYFDFIKIKLKSITEYPGAFWAHSIAKMMGWGADLIVVYLMVHKFESILSWSAYEVLFLFSMDATSYALAGFFMFNPFAMLSQHIQMGTFDEMLTKPLNPFFYLCFKGFTTGYLGNLISTVTAMIICIIKLNISMSFVNIFYLIIIIIGSALIHSALFMFSNIPAFWIVKTDALSSFRWALDEFIRYPISIYDRWIQIMLTFVFPVAFINFYPSQYFLQKSDFLGFSPFFAHMTVVIGSILFVLGYMFFFVGVRNYKSTGS
>NC_015520.1|WP_013782084.1|2632217_2633171_-|transposase
MDESESKIIRTYDEDIDAVIVMVKDMSLHIDLLNGTIICLNNKIVDLEAFNARQEIQIAELEARLNKNSDNSSKPPSSDGYKKAVYNTRQKSGKLSGGQPGHEGETLEKVQNPDEIIEYKVADTCDYGCSLTDIGAVKRTRQVFDISEPQIKVTEYVTYEKVCPICGKVYKREFPAEVTQPAQYGQNMCALMNYLTYYQLLPLERAAETDRDVTGQKVSEGTLVNAATALYEGLEGPVEEIKQSIIDSEIAHLDETGIRSEGSTKWLHVACTDRAAYYAVHEKSPAVKCQGPIGNIRNMANTLVFRTDESWRNLKKF
>NC_015520.1|WP_013782083.1|2631151_2632168_-|ATP-binding-cassette-domain-containing-protein
MAIIEVKNLYKEFKVYKRNSGFFDTVKSLFHREFEIKRAVEDVSFSVAKGELVGYIGPNGAGKSTTIKILTGILYPTSGEVLVRGIVPQKNRKENAMHIGVVFGQRSQLYWDLPMIDTFDLYKKMYKIDDKIFKQNVDFYTDILDMGEFINRPIRQLSLGQKMRAEFSIALLHNPDILYLDEPTIGLDVLTKKRIREFIRQINKERQTTVILTTHDMDDIEQICDRLILIDKGKILYDGKVEEFKTNFSEESIIEFSYGQKYGSDDKDILEVEGIKLSDGENSKKYASFNKKQYTAAQVIRMLMGIYDIIDFSIKDPKIEDILIKMYTTVGNRGGDNQ
>NC_015520.1|WP_013782093.1|2645543_2646413_-|radical-SAM-protein
MSYDLSCCFRNGDKNKYRILWEITDMCNQRCPFCHAKGTNNITIEDVKKILDNLKILQIKDIILTGGEPFLRKDIFEIMDMIQRGGYCVDLCTNGTLLDKEKISNLKKYVSEISVSLDAHNRELYRVLRGRDDFDKVIQNIRELVFQGIAVHLICTLNSHNYPFVEQIIALAEELRVDSIAVANIIADIANDVDYVKSVLLTDAQCKDIMLLIERLRPVTGIIINTKNIRKVCDNKQCMAGKNILGITSDGYLISCIMRRNSRKIKITGKIDAQMLHDLTADYMESFQK
>NC_015520.1|WP_013782094.1|2646469_2647546_-|radical-SAM-protein
MKWNIGWGVISSCNMKCEFCYSKKTRQEVQQLSFSQWKNFIDQNCDSVNSINYGTGENTLSDDWFRLVDYIGTHYPFIRQALTTNGYLVKRVRENAEFDRIVKNCISEIDVSLDYCIPSKHNAFRGFDSAYELAIKTLSYCETNGIISTIVFMGTNLTLEIQNISGLFDIAKAYHSKLRLNIFRPTDGINDHSKRFIADFSKIIDALKWINENHKIIAIDDPLFASVLCDDYEQIDPSGLQSLRILPDGSITPSTYLLKEKFRKFNILENHVLSKIDSTNVGIEFDTPAECAQCRYVDKCRGGVYDRRYLWYGSFNSRDPYCLYRPENYVPDFKVRISKVDSFQSIHHGYLPTMFFGV
>NC_015520.1|WP_013782096.1|2650523_2651915_-|HNH-endonuclease
MVFVLDKHKKPLMPCSEKRARLLLERSRAVVHKKEPFTIRLKDRTEEESQLQSLRLKLDPGSKATGAAVLADDTKAIWLGEIHHKSNIKKKLKDRRALRSSRRNRKTRYRQARFNNRHPAKCVACGKNAKHGSRYCRPCQKARNYVDNGYREKRLPPSLQARVNQTINCVTKLCKLLPITAISTEHVKFDTQLMQNPDINDVEYQHGELFGYEVKEYLLEKWGRKCAYCGKENVPLEVEHIIPKSRGGTDRISNLTIACHKCNQKKGNMTAEEFGYPEIQKQAKQPLKDAAMMNATRWALYDNLKKFGLPVECGTGAMTKKQRLAHKLPKTHYYDACCVGASTSDEITISTEYVSIWSAIGRGTRQMCRTDKYGFPKGYRKNRKQYFGFQTGDIVKANIPNGKYQGNFTGRVAVRSSGYFDIKDSTGNCLCQGVSWKYMQVLQRNSGWQYDKERRNPLLSQLK
>NC_015520.1|WP_013782097.1|2652134_2652752_-|hypothetical-protein
MRNDFLVMATIIIVITIISGAILIYQLTLPVANCEIQTVEIKVANIKSMELGNEISGKGTAVFGIGYGFIGEHPYYYVYKETGADQYLLDKLDAQKVYLVENNSQPRMVYQYKYFVVKGKSKAININGVKYKPDRLFRYEVNGETYAIVKNNTDNPEYKPLAEKLSLKPEETLYVSSLSPQIKLYVPKDTVKVECQLPTSKEVGL
>NC_015520.1|WP_013782098.1|2652873_2653539_-|hypothetical-protein
MEEVQCRVRCSGHMHTITLTESGALVLHDHPDLITERALVALGGKLPRCLAILEAWKQKDRATLPPALRPAFDKRMKKLWQRASNKYNCDPLDTPIFERTVEKATTLAHITLGKCAYKRQEWPGNTDRIRIGKPDICGMAVTQKKTIITVTIPPVWLARVYRRGLAVVDGWFVLDVLAEDEKRYLVLAGRQGKEFEIYPSQAWVNRSADGNWRLRWVWRQQ
>NC_015520.1|WP_013782099.1|2653544_2654279_-|hypothetical-protein
MEEVRCRVRCSGHMHTVTLTESGALMLHDHPDLITERALVALGGKLPRCLAILEAWKQKDRAPLPPVLHPALNEAQKKTKERVMRNTFTDPLSVSFRTRAEERVKKIAEDLLQKCAYRRSQSRWAGGNHIACARVGEPHICGGSEQVRSENGKWTGTNSYVSATVPISWFTRVYRRGLAVVDGWFVLDVLAEDEKGFTVLAGRQGRGFEVNLWPAVITRSADGDWHLRWVSRGNSIVTVKKEGE
>NC_015520.1|WP_013782100.1|2654415_2655639_-|VWA-domain-containing-protein
MPMPEDLQAARLRLVEERPYLASAALALHPVEKPGLETMAVDQYWRLYYDPVVVEHWTAEEMSGVLYHEICHLIRDHASRMKNLDHTIANIATDAEINDDLIHEGVKLPENPVTPASIRQPDNLLAEEYYAALEAKAEHISLLRAGVCDNPADENKTGMQTPAPCAGRCGSCATGQQESWEDDPPDSSNGINQAEAELIRRDTAVQIIHASKSCGNIPAHLVRWANAKLQPKVDWRREMASVVRNAVAQVSGTVDYSYNRPNRRQGQFRDNKIILPSLCQPIPEVAIVVDTSGSISNDMLTKALAEVSGVLKSCGSRGVTVLATDASVHTCKKVFNVKQVNLVGGGGTNMGSGIEAALKLKPRPQVVIVLTDGYTPWPGIPPQKAKVIVGMMSDQEAPAWAKTIKIA
>NC_015520.1|WP_013782101.1|2655638_2656721_-|ATP-binding-protein
MEEVLAMAIAIQTKVPVILWGAPGTGKTSAIQAMGDQMGLPVEVVIASIREPSDFSGLPVIRDDGVHLEPPAWAKRLAQAGKGILFLDEISTAPPAVQAALLRVVLDKVVGDQPLPAEVAIVAAANPPEQAAGGWELSAPLANRFCHLDWELNPTEWVNGMVSGFKNKPMPELPEDWQDKIPQAKAAIAAFIRHRPHLLLQMPNEDSLVGKAWPSPRSWDMAARLLAAAESVDVGEEAEATLLSGCVGTGPALEFLSWKKALDLPDPEDLLEHHDQFQVPLRGDQAFAVLTAVVVAAVNKLTEKRWIAAWQILAQAAEQGAKDIAAAAAKALVEARKPNLPLPQKEVREFIPLLKKGGLI
>NC_015520.1|WP_013782102.1|2657507_2658254_+|ion-transporter
MDIIIIILAVVSVVMAIADLVGAAVTLKPWFYPLDSIILIFFAIDYFFRLFTAKDKKDFFKRNIFDLIAIIPFGPLFSFFRVFRIFRLTKLVKLFKIVRFIGISGRFKQRIDAFLHTNGLIYVIYINIACLLVGSIAIYITEKGLTVQSFGDAVWWAFVTTTTVGYGDISPKTGIGRIIAAVLMMCGIGLISMLTGTIATYFTAIANQDAKTKKMDELKTIADILTAEQLDELINFANNISARDKIVQ
>NC_015520.1|WP_013782103.1|2658405_2658906_-|hypothetical-protein
MSKVVIPGEKRKKGNGCLTFILSVIVFIVLGMIGNWYLNKTMPPETAKPEPKDYGPEELFPSMPPRTGKVLLKTKAEYEDGVITITGVATNDNDTVIYSPIIVLEIYADDVKIDEQTTWPAGWYAKEVRSGEKAAFEFYSIPPNGFDKVQWRVYCQNYLSEMIEEE

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Crispr_ID: NC_015520_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_015520_4

2671465-2671964

TypeIV-A

Consensus_repeat	Method
CTTTTAACCCCTCACAGAAGGTATCTGCAC	CRISPRCasFinder
CTTTTAACCCCTCANAGAAGGTATCTGNAC	CRT
CTTTTAACCCCTCACAGAAGGTATCTGCACC	PILER-CR

7 spacers

csf3gr5,cas6,csf2gr7,csf1gr8

The CRISPR arrays of NC_015520_4

>merge|NC_015520|4|2671465-2671964|CRISPRCasFinder,CRT,PILER-CR
TTTTTAACCCCTCATAGAAGGTATCTGTACAATCCGAGCGCTGCCTGAAATTTTCATTTATAGTGAACTTTTAACCCCTTATAGAAGGTATTTGCACTCGGCGCATCACACAGCAATTTACTTTCCCATTCATCTTTCAACCCTTCATAGAAGGTATCTGTAACAGCGGAGATATATAGGCACCTAATTCGTCAAATACTTTTAACCCCTCATAGAAAGTATTTGTATCTAGTCGTCCTAAGTAGGAAGCAAATGATGGGTAAAGCTTTTAACCCTTCATAGAAGGTATCTGCACCAACATCGGCCTATAAGTATTCATCTTCATCCATCTCCCTTTTAACCCCTCACAGAAGGTATCTGCACGTGCGAGTGCCCAAGAAGGCGTTGTTGGAGTGGCTACGACTTTTAACCCCTCACAGAAGGTATCTGCACCGGCATAAGGAGGTGTTCTCAATGCAGGTAGCAACAGCTTTTAACCCCTCACAGAAGGTATCTGCACC

>NC_015520|4|4|2671465-2671963|CRISPRCasFinder
TTTTTAACCCCTCATAGAAGGTATCTGTAC	AATCCGAGCGCTGCCTGAAATTTTCATTTATAGTGAA
CTTTTAACCCCTTATAGAAGGTATTTGCAC	TCGGCGCATCACACAGCAATTTACTTTCCCATTCAT
CTTTCAACCCTTCATAGAAGGTATCTGTAA	CAGCGGAGATATATAGGCACCTAATTCGTCAAATA
CTTTTAACCCCTCATAGAAAGTATTTGTAT	CTAGTCGTCCTAAGTAGGAAGCAAATGATGGGTAAAG
CTTTTAACCCTTCATAGAAGGTATCTGCAC	CAACATCGGCCTATAAGTATTCATCTTCATCCATCTCC
CTTTTAACCCCTCACAGAAGGTATCTGCAC	GTGCGAGTGCCCAAGAAGGCGTTGTTGGAGTGGCTACGA
CTTTTAACCCCTCACAGAAGGTATCTGCAC	CGGCATAAGGAGGTGTTCTCAATGCAGGTAGCAACAG
CTTTTAACCCCTCACAGAAGGTATCTGCAC

>NC_015520|4|2|2671465-2671963|CRT
TTTTTAACCCCTCATAGAAGGTATCTGTAC	AATCCGAGCGCTGCCTGAAATTTTCATTTATAGTGAA
CTTTTAACCCCTTATAGAAGGTATTTGCAC	TCGGCGCATCACACAGCAATTTACTTTCCCATTCAT
CTTTCAACCCTTCATAGAAGGTATCTGTAA	CAGCGGAGATATATAGGCACCTAATTCGTCAAATA
CTTTTAACCCCTCATAGAAAGTATTTGTAT	CTAGTCGTCCTAAGTAGGAAGCAAATGATGGGTAAAG
CTTTTAACCCTTCATAGAAGGTATCTGCAC	CAACATCGGCCTATAAGTATTCATCTTCATCCATCTCC
CTTTTAACCCCTCACAGAAGGTATCTGCAC	GTGCGAGTGCCCAAGAAGGCGTTGTTGGAGTGGCTACGA
CTTTTAACCCCTCACAGAAGGTATCTGCAC	CGGCATAAGGAGGTGTTCTCAATGCAGGTAGCAACAG
CTTTTAACCCCTCACAGAAGGTATCTGCAC

>NC_015520|4|2|2671730-2671964|PILER-CR
CTTTTAACCCTTCATAGAAGGTATCTGCACC	AACATCGGCCTATAAGTATTCATCTTCATCCATCTCC
CTTTTAACCCCTCACAGAAGGTATCTGCACG	TGCGAGTGCCCAAGAAGGCGTTGTTGGAGTGGCTACGA
CTTTTAACCCCTCACAGAAGGTATCTGCACC	GGCATAAGGAGGTGTTCTCAATGCAGGTAGCAACAG
CTTTTAACCCCTCACAGAAGGTATCTGCACC

Protein	Signature genes	Signature genes Name	Protein_function
NC_015520.1\|WP_013782105.1\|2661670_2663065_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378383
NC_015520.1\|WP_013782120.1\|2681384_2682953_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371316
NC_015520.1\|WP_013782116.1\|2677522_2678170_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341157
NC_015520.1\|WP_013782110.1\|2669860_2670550_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	unknown
NC_015520.1\|WP_013782113.1\|2673071_2673788_-\|hypothetical-protein	csf1gr8	mkCas0210_csf1gr8_CAS-IV-A	gnl\|CDD\|274434
NC_015520.1\|WP_013782112.1\|2672070_2673075_-\|hypothetical-protein	csf2gr7	mkCas0162_csf2gr7_CAS-IV-A	gnl\|CDD\|376656
NC_015520.1\|WP_013782119.1\|2680494_2681373_-\|DNA-adenine-methylase	unknown	unknown	gnl\|CDD\|223415
NC_015520.1\|WP_013782114.1\|2673816_2674329_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275138
NC_015520.1\|WP_049783410.1\|2686137_2686704_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NC_015520.1\|WP_013782111.1\|2670546_2671323_-\|hypothetical-protein	csf3gr5	cd09707_csf3gr5_CAS-IV-A	gnl\|CDD\|132160
NC_015520.1\|WP_041644146.1\|2666583_2666886_+\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782117.1\|2678166_2678778_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341163
NC_015520.1\|WP_171804984.1\|2667166_2669401_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350691
NC_015520.1\|WP_013782103.1\|2658405_2658906_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782115.1\|2674424_2677526_-\|type-I-restriction-endonuclease-subunit-R	unknown	unknown	gnl\|CDD\|223683
NC_015520.1\|WP_171805008.1\|2660087_2661362_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225212
NC_015520.1\|WP_013782109.1\|2669503_2669824_-\|DUF4359-domain-containing-protein	unknown	unknown	gnl\|CDD\|372990
NC_015520.1\|WP_013782107.1\|2664539_2666399_+\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NC_015520.1\|WP_013782106.1\|2663052_2664291_-\|hypothetical-protein	unknown	unknown	unknown
NC_015520.1\|WP_013782118.1\|2678777_2680343_-\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|211578

Protein	Function_ID	Function_description	E-value
NC_015520.1\|WP_013782105.1\|2661670_2663065_-\|hypothetical-protein	gnl\|CDD\|378383	pfam10087, DUF2325, Uncharacterized protein conserved in bacteria (DUF2325). Members of this family of hypothetical bacterial proteins have no known function.	9.62053e-05
NC_015520.1\|WP_013782120.1\|2681384_2682953_-\|hypothetical-protein	gnl\|CDD\|371316	pfam10961, SelK_SelG, Selenoprotein SelK_SelG. This entry inclues a group of eukaryotic selenoproteins, such as SelK and SelG. SelK seems to play an important role in protecting cells from endoplasmic reticulum stress induced apoptosis. SelG may be involved in regulating the redox state of the cell.	0.00678769
NC_015520.1\|WP_013782116.1\|2677522_2678170_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341157	cd17268, RMtype1_S_Ara36733I_TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.Ara36733I TRD1-CR1 AND S.Ara36733I TRD2-CR2. Actinomyces radicidentis S subunit (S.Ara36733I) recognizes 5'... CGAGNNNNNCTG ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	5.50803e-102
NC_015520.1\|WP_013782113.1\|2673071_2673788_-\|hypothetical-protein	gnl\|CDD\|274434	TIGR03114, cas8u_csf1, CRISPR type AFERR-associated protein Csf1. Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf1 (CRISPR/cas Subtype as in A. ferrooxidans protein 1), as it lies closest to the repeats.	0.00573137
NC_015520.1\|WP_013782112.1\|2672070_2673075_-\|hypothetical-protein	gnl\|CDD\|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	0.00279755
NC_015520.1\|WP_013782119.1\|2680494_2681373_-\|DNA-adenine-methylase	gnl\|CDD\|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	5.80855e-14
NC_015520.1\|WP_013782114.1\|2673816_2674329_-\|hypothetical-protein	gnl\|CDD\|275138	TIGR04342, hypothetical_protein, EXLDI protein. The most conserved region in this protein family is the C-terminal pentapeptide, with motif ExLDI. Members from the Firmicutes average about 120 amino acids in length, while members from the Actinobacteria have an additional 45-residue amino-terminal segment not included in the model. In it is suggested that the member from Streptococcus mutans UA159, and its homologs, participate in bacteriocin production, export, or immunity.	0.00310585
NC_015520.1\|WP_049783410.1\|2686137_2686704_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	8.81632e-39
NC_015520.1\|WP_013782111.1\|2670546_2671323_-\|hypothetical-protein	gnl\|CDD\|132160	TIGR03116, cas5_csf3, CRISPR type IV/AFERR-associated protein Csf3. Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf3 (CRISPR/cas Subtype as in A. ferrooxidans protein 3), as it lies third closest to the repeats.	2.76501e-07
NC_015520.1\|WP_171804984.1\|2667166_2669401_-\|AAA-family-ATPase	gnl\|CDD\|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.30202e-43
NC_015520.1\|WP_013782117.1\|2678166_2678778_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341163	cd17274, RMtype1_S_Eco540ANI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.Eco540ANI TRD1-CR1, S.Eco2747AII TRD1-CR1, S.Eco540AI TRD1-CR1, S.Eco2747II TRD1-CR1, and S.Eco540I TRD1-CR1. Escherichia coli ST540AN S subunit (S.Eco540ANI ), Escherichia coli ST540A S subunit (S.Eco540AI), and Escherichia coli ST540 S subunit (S.Eco540I) recognize 5'... GAANNNNNNRTCG ... 3'. Escherichia coli ST2747A S subunit (S.Eco2747AII) and Escherichia coli ST2747 S subunit (S.Eco2747II) recognize 5'... GAANNNNNNNTAAA ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.19917e-97
NC_015520.1\|WP_013782115.1\|2674424_2677526_-\|type-I-restriction-endonuclease-subunit-R	gnl\|CDD\|223683	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NC_015520.1\|WP_171805008.1\|2660087_2661362_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.5174e-90
NC_015520.1\|WP_013782109.1\|2669503_2669824_-\|DUF4359-domain-containing-protein	gnl\|CDD\|372990	pfam14271, DUF4359, Domain of unknown function (DUF4359). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length. There are two completely conserved residues (P and S) that may be functionally important.	9.80237e-13
NC_015520.1\|WP_013782107.1\|2664539_2666399_+\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	7.08012e-12
NC_015520.1\|WP_013782118.1\|2678777_2680343_-\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|211578	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM). Function: methylation of specific adenine residues; required for both restriction and modification activities. The ECOR124/3 I enzyme recognizes 5'GAA(N7)RTCG. for E.coli see (J. Mol. Biol. 257: 960-969 (1996)). [DNA metabolism, Restriction/modification].	0

>NC_015520.1|WP_013782111.1|2670546_2671323_-|hypothetical-protein
MLYKNYIVTVYLDIPIAIPANKNEIFPIHFDGLLTRIMAEEARSFDYSRLTAEDIELPLEKWGKTKMIYKASSMMIKPPAKVYREPWMGTQTWLDYGRVLFPDSFNKQIRNGQGVYKSSAGYLHLIDTPQVYFYFCGDGQAVKHTLEKLIGRGIGVRANAGYGQVRKITIEPSKDYSLIAEDGYPARNIPVDEIEGDIRWPVQRGTYKPPYWDYEEATICYVSPRWHWWPVKQPAEVLKEILKHNKKPDTISEEGEDQ
>NC_015520.1|WP_013782110.1|2669860_2670550_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTGYPYPRPQAVKIQVKGHVPYPKNALATVYDIFRDIETVNKAHEAKEAPPFAIKDFNMNGFAITSYLALPTDTVTERLKTKGFHTVGQPIYLPQNELPPLYGLKGVTIQFRTPTAFKYNTGYVPEFYGPVFIKSITESYRRIIPGCPEFSTSDILKYIRFTATDLQKGKYRLTEELMVTGFKGKVYLQFKLSTPPELKLLILYFLEAASICGVGMKKAWGMGDIYITI
>NC_015520.1|WP_013782109.1|2669503_2669824_-|DUF4359-domain-containing-protein
MNKLNIFILCIIAVMLIAIFTNPSRQDYINWAQDVAEQEMAQEMDPNSILDSITGLVSRSIINNYLHTSTKLSNYLFFSIYRTDFGDAYIVALGIFGHFIVLNMAN
>NC_015520.1|WP_171804984.1|2667166_2669401_-|AAA-family-ATPase
MSKDRRTGKVYITRGNNAGQEINFTALAGIMPPIRYNTAVRLMGYFSKDNTFIVNKANGIVKEIAATDVAALGISQDIIERAIEAAGVNTVYELYTDEDAKDKIASAIGEDMAYQLFSALSTIIRDSEVLNVYNMFIKSGVGLDITDAINIIDQLKRTAARQRKTVEELILQNPWILHRIPDIGVTDMLHICDCIAKTFNIIPGSKRIEGCLAGICMAEMKNGSTYIDRKLLVSRAAAYLKTDLNTISQALYESKFLTQEKGDSVGAADNKTAVYISPVYFMEKTATEKIALILKTKEAISIDADKLISFANEWGKAANTPMDGKQTNFIKAVAEHKITLLTGKAGSGKSTAVKGLLYALKMTGIQYAVLAPTGIAAQRVAAETGSDYYTVHRYAGIIDGSVFDQQLSGKAEEPAEVIIIDEMSMMTVNTFSALLSVIKPTSKLVLAGDPAQLPPIGPGGVFDALIRAAKDCDIAHIDLESSYRMKDNINYAANILRDTGYLEPNDGIKIIEVQSWQDAADEAVEAVTELVRTGVPYDDILVLARNRGNIRKGTICLNQKLKQAINPSNDRISVGDPVIAIRNDYEDITVSGIPSALKKQFETIKKERGNRPTIFNGTRGMITALGDEVITVRYKTPVGEITAEYNQVELLWYIEPAYAMTVHKAQGGKSRHVIFIEPEAGKCSRNMLYTALSRCSGPGITLIGSGWDSEFKVITPESRFDKKLWETINGFIEECEEPAVQLIE
>NC_015520.1|WP_041644146.1|2666583_2666886_+|hypothetical-protein
MASGVNIRIPHDMADWLRAFAKSHDTTVSAILTDYIAYIRENYDYRRCGNCSMYAAPTAGTRGQCMGNNLLSEPDPERDVCRYWKPKSGILARLEKPRPV
>NC_015520.1|WP_013782107.1|2664539_2666399_+|IS1634-family-transposase
MKLYYDRKSKDPTYFIQMGFRNGKKTSTRNVKRIGKHSELLAISPDPLAYAKQEVRKYNEAYKSNKAELNIKIDFDEKLSATNYVASKSTLLNIGYFVLQKIYQDLKISDFFKDVQMDSKATFSCNDINRFLTFARILDPKSKWGTFDKLDTYFEQPSFEYQHILRFMDILEDNYDSYLEHLYLNSENIMPRNTSVCYFDCTNYYFETEQEDDDFVDEVTGEILRGFRKYGPSKQHQPSPLVQMGLFMDGNGIPISMCINPGSDNEQKSAIPLERKITKMFKGKPFIYCADAGLGSLNIREYNSFGGRTFVVTQSVKKLSETLQQAVFNDFGYHRLSDDSLVTIHHMKEFDRFNKDNLSLYNDVAYKVIDVDSAVDVGLYEERVFKNGNTKKVKSKAILKQRIIVTFSRKMMEYQRSIRNAQIERAKDIIEHKAVEDVKKGPHDVTRFITRISVGKNGEKASDYYKLDHAAIEREERYDGYYAVATNLEDSAKSILEINSRRCKIEDCFRVLKTNFRARPIYHRNQSRIIAHFMICYTALLIYRLLENKLDQYSKHYTTENILTTLQNMNVADMNGMYYMATYTKSEVCTALNSIYGMRLDNKTHAPKDLNKIIKKITK
>NC_015520.1|WP_013782106.1|2663052_2664291_-|hypothetical-protein
MKKLMPIILISLAAVAGTFIGTSLANQPRITVPDAVVKDEKEAQQNNISSSQDAVTLTLQKQDKTDTQQNMTGDAHKQDVAEQAAPQEQNIVLQDNEISQKQDAALQDAGVEQSQDEPHIQRPLFSSIYTPQKDVFEFEEIPIGITRDIDAVIAFIMGHPVDQSAEKVIIDATSTVDVELERQMKNNKELFTIAENSLSPEDYRLYTRNKMRLEALEFGVPWIQPSGGRWNLQLDVVHDDTFADPDIWGEPQVDTTILPGRPQDVYQGVELLLDKRFWVLKDYWKPLDEGETDVGYDTEIVIAGDVSLKKYTDAVIKSLFANYDTDALLQRIDLWRQLDWSKIITGYRALWTVPMRDGERVGDLYFWYKIIPDTIVPQPIEIITITRYDEEWLYGDGKSVEEVLKEQKKWEQ
>NC_015520.1|WP_013782105.1|2661670_2663065_-|hypothetical-protein
MGTMINLLPFLVEAFGTNQNIRADVDRLYSNHKDVFYKYAKESKCYDHPIIKDGDIYKEEYARKALGILEYAQATEDAEVTDALINVMKEGWPKVYAYLNNADKVDFEEYVANYLDIDRMTDDELNSELAVLYFFAHIFNKEVVNNHALGVLESMLVLRERFYFDDSTRFTWNTLSPEIKQKARSLKQRIYDAKYPIKGYMDIDMSENEEIRDVFTVYTYLFDTELLSTTILQNIDYTDRDINEILASYFLIYKNQNVDETIKFLIPGIIIKGLIKAYKEVKEYFFKNNKENMYLEMKNQADKIAQLESQNKFLSIQNDTLKNRLEEAYDKAEAAYKDEIRSLQNQVKNLQEQLAEVKLNERELFALREFVFNLSQEEEIERTEQISEQYNRGIVIGGRERWQKRLQEKYPDFIFISADAKNFDTAVFDNADVVLFNTAYLSHSVYDKAMNEIRKRNLPIKYVR
>NC_015520.1|WP_171805008.1|2660087_2661362_-|MBL-fold-metallo-hydrolase
MPDAAPTDTASIQTQANKQEVNPAQKTEPVSETESEKVQPVSEEKPEDQPGTVTPVPEEKPQAATETMVETSSNSVLKLHFIDVGQADSILVQTPKGKTMLVDAGNNADGNAVLSYLKTQDVKKIDVLVGTHPHEDHIGGMDTVINAFPIGKIYMPRATTTTKTYEDVLNAIASKGLKITAAKGGMSIDIDPTVKTDILAPNSSSYDDLNNYSAVIKLTYGKTSFLLDGDAEDVSEQEMLAKGYNLKADVLKVGHHGSNSSTTPAFLKAVSPKYAVISVGAGNSYGHPAPETLAGLASTGVQIYRTDEAGTIVITSDGNTIKIDKKASPVKPQAPPVSSGTASKSSSGSENKTVVVPVPAPSKEKVTPAPLQPSKNDVTVYITDSGEKYHKDGCRYLKKSKIPIKLSEAKAKGYTPCKVCGPPQ
>NC_015520.1|WP_013782103.1|2658405_2658906_-|hypothetical-protein
MSKVVIPGEKRKKGNGCLTFILSVIVFIVLGMIGNWYLNKTMPPETAKPEPKDYGPEELFPSMPPRTGKVLLKTKAEYEDGVITITGVATNDNDTVIYSPIIVLEIYADDVKIDEQTTWPAGWYAKEVRSGEKAAFEFYSIPPNGFDKVQWRVYCQNYLSEMIEEE
>NC_015520.1|WP_013782112.1|2672070_2673075_-|hypothetical-protein
MIKADIVMTLRSPLAHSTPDVQGEGKRGNITELRKIPFITSYGELIQLPAVSGNSIRCSKRRVQGYKMLQELNDITLPLDAIYFILAGGTTGNTKAKPVGQNVYAELRQTLPFIDLFGGSYKGHFLGGRMGVGFGLPVTKETLPIHSKVMDKLGLNTDPDVYPDLLSLNEAINNNVIMYARHALEGTRGLTDETESSASGQMIYGMQAMPIGTVLISRIVLNEPTASPLTESCYYAFLSTLLDDGFLGAAFAKGCGEFDAMVLVNGTKTEKDEIRERGLPFWESIQSNKEKIEQTLLGLDNILQNEPSDTKKNKQNKKNNGTGDDALTESSTSQ
>NC_015520.1|WP_013782113.1|2673071_2673788_-|hypothetical-protein
MGKPLSATQVIYISRTGDITTEPGTCRICGGPLIGGSRKHSESEWGNWNSENTVRAFYSDQVCGACLYLRSAISARGNLKLNKGFIASISAGFKPFVEKQDIMNALAHLPEPPFVLTIAFTYVRTNYPFVLPVSYSAKHVRAGLIMGRDRKIRIASNTPGKYIKISPAGEEIYTVDFEPTELLDLTETLKKHEDELYIREFRDLCLADPYWALAFWLADLKAGKLYKTMPYLEGSNKS
>NC_015520.1|WP_013782114.1|2673816_2674329_-|hypothetical-protein
MPTKTIYVKEEDMPIFERAAEIAGDSLSSIITDAVRDYVRRKESEDSGMREIILEIGTWPNHGDSNTKKVAFTGVSLGEMTLFKGQTNSRDDRGVDWELYLTKKGKYVVYRRVWSRWQNESSYAEYYILDELPGTDNMIKTKDGEYIEIPAGLVQTAREKEGRMVEILDI
>NC_015520.1|WP_013782115.1|2674424_2677526_-|type-I-restriction-endonuclease-subunit-R
MSMYNIIASTDEATVVSEYTAEQSGRSGKYQTEAELEKEFIQQLVSQGYEYLTIHNEAGLINNLRKQLEMLNGFTFTDSEWENFFSEHIANINEGIVEKTRKIQDDYVQNLKREDGTTKNVYLIDKNNIHNNRLQVINQYEETGGKHKTRYDVTILVNGLPLVHVELKRRGVALREAFNQINRYQRDSFWESSGLFEYVQIFVISNGTHTKYYSNTTRDCHIKEQNRREYPGSKKTSNSFEFTSFWADANNKIIPDLMDFTKTFFVKHTLLNVLTKYCVFTSEDLLLVMRPYQIAAAERILSRIITSTNYKKMGTTQAGGYIWHTTGSGKTLTSFKTAQLASALPGIDKVLFVVDRKDLDYQTMKEYDRFEKGAANGNTSTKVLQRQLEDKDEKGNPHEYKIIVTTIQKLDMFIRKNKQHEIYKKQVVLIFDECHRSQFGEMYRAITKSFKNYHIFGFTGTPIFAVNSNPNGNPVLRTTEQAFGDRLHTYTIVDAINDGNVLPFMIDFINTIKVPGYTEDELPRTIDRENILANPQRISEIVSYVLEHFDQKTKRNSYYTFSAKWDEPDKKAPKQTIEKREIRQVAGFNSIFATASIPMAIKYYKEFKKQISEQNRNLIIATIFSYSANEAEPDGLLPDEDFSMENLDQSYRDFLEEAIQDYNKTFNTNYDTSPDKFQNYYKDISRRMKNREIDMLIVVNMFLTGFDATTLNTLWVDKNLRQHGLMQAFSRTNRILNSVKTYGNIVCFRDLRKETDQAIALFGNKDASSIVLLKTFNEYYNGYDDKGEHKPGYKELIQTLITKYPRGQRIIGETAQKDFIQLYGAILRLINILTCFDEFAGKEILSEKEFQDYQSDYIDLYQEYRKSAEGNKETINDDVVFEIELVKQIEVNIDYILKLVAKYQKTNCTDKTIRTTIDKAINSSIELRNKKDVINSFIDQVDASTEIDEEWYRFLQERKEADIKAIIEEEKLKPEEARRFINNAFRDGILKTTGTAIDRFMPPISRFSDDRTVRKQKIIKKLTDLFEKYSGLI
>NC_015520.1|WP_013782116.1|2677522_2678170_-|restriction-endonuclease-subunit-S
MSKLDKLIAEYCPDGVEYRKLGDVATISRGGNFQKKDCVADGEVPCIHYGQIHTYYNLFVDKTISYISKETAKKQKFAETNDIVMAVTSENIDDVCKCIAWLGKGKIAVGGHTAIIHHLLNPKYLVYFLSSSLFYQQKVKLAHGTKVIEVTPDKLVDIIIPVPPLPVQQEIVRILDNFTELTTELTTDLTAELTARQKQYEYYRDKLLSFKEATA
>NC_015520.1|WP_013782117.1|2678166_2678778_-|restriction-endonuclease-subunit-S
MSKLEQLIEELCPDGVKYVSFAEVIDYEQPTKYIVSSTDYDNNYKIPVLTAGQSFILGYTDETDGLYRASKEKPVIIFDDFTTSLHWVDFEFKVKSSAIKILTPKNTNIAVFRYLYYAMSNTRYQPDFSKHERQWISRYSKFTIPVPPLPVQQEIVRILDNFTELTTELTTELTTELTARQKQYEYYRDKLLSFKKVAAGGQK
>NC_015520.1|WP_013782118.1|2678777_2680343_-|type-I-restriction-modification-system-subunit-M
MEDNRKEQERAELHRTIWNIANNLRGSVDGWDFKQYVLGMLFYRYISENITAYINAGEWAAGRPEFNYAKISDAEAEKIREDLVEAKGFFILPSELFENVRARAKNDENLNETLERVFRNIEASAQGTESEPDFKGLFDDLDVNSNKLGSTVAKRNEKLAQLLDSIAEMKLGDYKDNTIDAFGDAYEYLMGMYASNAGKSGGEYYTPQEVSELLTRLTLVGKTEVNKVYDPACGSGSLLLKFAKILGKDNVRLGFFGQEINITTYNLCRINMFLHDIDYDKFNIALGDTLTDPKHRDNEPFEAIVSNPPYSISWKGDSDPILINDPRFAPAGVLAPKSKADLAFIMHCLAWLAANGTAAIVCFPGVMYRGGAEKKIRQYLIDNNYIDCIIQLPDNLFYGTSIATCIMVLKKSKRDNSTLFIDASKEFVKATNNNKLTQKNIETILNAFKDRKDIEYLAKLVPNSKIAEQDYNLSVSTYVEKEDTREKIDITALNAEIKRIVAREQVLRYEIDKIIAEIEVE
>NC_015520.1|WP_013782119.1|2680494_2681373_-|DNA-adenine-methylase
MPETINPLRYPGAKRSLVNYIDALLDANHLQGCTFFEPYAGSAVVGLELLQRGHIGGLVLCEKDILLYAFWECVFRDTDALCNKIQDTPITIETWQQQNQYREVVSLDQADLLDLAFAGLFFNRTNFSGILKANPIGGINQTSRYGIDCRFNKAKIIEIILRLSAYRDVIEVNCNDALQFMRTQNARFLRQNCFAYFDPPYYEKGSEIYRHYYTNQDHIALAHYVRDVHRLDWIISYDDAPFICGLYSNTGAQYQPFFLDYTCASKVRTQGQELLISNLPLPPFPARIVESC
>NC_015520.1|WP_013782120.1|2681384_2682953_-|hypothetical-protein
MSITISPLDLVLDTQNPRFVILARREQVDIRKYLVTYEDVCQLAAAINEYGSLLPGERIVVLQENEKYVVIEGNRRTCSLQLLLSRNLIPDGFAHRIPHTSAKILENCHRIEVDVLPDRNSALDLMTKRHIQGVKEWKPLAKKQFFAANYNDGDGQSVQNLSRITGIKEGDIKEDIRDYKFFFNVYKKYCAAHPDFDKEIIVLKIDPFWRIFKAKFEYPVGMKVNPKDFLKISYDDTFNTVSALPPALFEQITQLVFEKSIVEERITTRNVLSDIEEIRPLLQAVMDSIDVSPPNDGDTSSGDGAAAGANGTQQPPANGGNGEHPPQGGANGGSAVGQDGNTGDDNGDQSGGPRPGGPPPRSFFETISWRDKLNPTNQQHQGLLYAINELYALSNTSCGRQKAYRTFPIATGMILRTVYEQALRLRLMQVNLWGAYCQLRNGALPTLKTMEDFINLDTNKATVFPDQGMIIIYDRVIAATHRDFLNANIHYPGNINVTADSLEAIAAGGMYALIQGIINLIV
>NC_015520.1|WP_049783410.1|2686137_2686704_+|ATP-binding-protein
MKGAHFRIPAADIHDIYYVDRNLDREQLMELATCQFISNCRNVTFQGFTGSGKSFLACALGKEACKHGIRTCHIRFPDLLLAWEEAKQEQYDVSKLLKKYSACTLLILDEWLIQTLSEEQLHFIFELIERRYDEGSTIFCTQYKNEDWHARLGGGILAYSILDRVVHRTIRVYSGDTNMREFLVTHNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_015520_3	3.1\|2645378\|30\|NC_015520\|CRISPRCasFinder	2645378-2645407	30	NC_015520.1	2642578-2642607	0	1.0

1. spacer 3.1|2645378|30|NC_015520|CRISPRCasFinder matches to position: 2642578-2642607, mismatch: 0, identity: 1.0

ggagcaagccttccaagagtctttgaggtc	CRISPR spacer
ggagcaagccttccaagagtctttgaggtc	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_015520_2	2.62\|2340815\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340815-2340851	37	MK448709	Streptococcus phage Javan231, complete genome	28594-28630	8	0.784
NC_015520_2	2.62\|2340815\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340815-2340851	37	MK448710	Streptococcus phage Javan233, complete genome	28594-28630	8	0.784
NC_015520_2	2.35\|2339013\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2339013-2339049	37	LT615366	Enterococcus phage VPE25 genome assembly, chromosome: VPE25	70842-70878	9	0.757
NC_015520_2	2.35\|2339013\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2339013-2339049	37	LT546030	Enterococcus phage VPE25 genome assembly, chromosome: I	70842-70878	9	0.757
NC_015520_2	2.35\|2339013\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2339013-2339049	37	MT119360	Enterococcus phage nattely, complete genome	70028-70064	9	0.757
NC_015520_2	2.57\|2340479\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340479-2340514	36	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	359455-359490	9	0.75
NC_015520_2	2.40\|2339347\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2339347-2339382	36	NZ_AP014822	Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence	19372-19407	10	0.722
NC_015520_2	2.52\|2340146\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340146-2340181	36	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	72377-72412	10	0.722
NC_015520_2	2.52\|2340146\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340146-2340181	36	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	74614-74649	10	0.722
NC_015520_2	2.52\|2340146\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340146-2340181	36	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	85330-85365	10	0.722
NC_015520_2	2.52\|2340146\|36\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340146-2340181	36	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	117815-117850	10	0.722
NC_015520_2	2.63\|2340882\|37\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2340882-2340918	37	NC_048807	Erwinia phage pEp_SNUABM_01, complete genome	128921-128957	11	0.703
NC_015520_2	2.82\|2342152\|35\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2342152-2342186	35	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	677364-677398	11	0.686
NC_015520_2	2.82\|2342152\|35\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2342152-2342186	35	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	444229-444263	11	0.686
NC_015520_2	2.82\|2342152\|35\|NC_015520\|CRISPRCasFinder,CRT,PILER-CR	2342152-2342186	35	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	444279-444313	11	0.686

1. spacer 2.62|2340815|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to MK448709 (Streptococcus phage Javan231, complete genome) position: , mismatch: 8, identity: 0.784

gtggacaaggtttctttgataccattccaagcatctg	CRISPR spacer
ttcgagaatgtttctttgataccattccaaagattag	Protospacer
 * ** ** *********************. **. *

2. spacer 2.62|2340815|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to MK448710 (Streptococcus phage Javan233, complete genome) position: , mismatch: 8, identity: 0.784

gtggacaaggtttctttgataccattccaagcatctg	CRISPR spacer
ttcgagaatgtttctttgataccattccaaagattag	Protospacer
 * ** ** *********************. **. *

3. spacer 2.35|2339013|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 9, identity: 0.757

tttcgccaacttcttttattttgttccatgtattgat	CRISPR spacer
ttgagctaacttcttttactttgttccatgcgtccgt	Protospacer
**  **.***********.***********..*. .*

4. spacer 2.35|2339013|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 9, identity: 0.757

tttcgccaacttcttttattttgttccatgtattgat	CRISPR spacer
ttgagctaacttcttttactttgttccatgcgtccgt	Protospacer
**  **.***********.***********..*. .*

5. spacer 2.35|2339013|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 9, identity: 0.757

tttcgccaacttcttttattttgttccatgtattgat	CRISPR spacer
ttgaactaacttcttttattttgttccacgcatctgt	Protospacer
**  .*.*********************.*.**. .*

6. spacer 2.57|2340479|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.75

catggccagtgatacttgttcagctaaatgatactc	CRISPR spacer
aatgtttctggattctttttcagctaaatgatactc	Protospacer
 *** ..   *** *** ******************

7. spacer 2.40|2339347|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014822 (Geminocystis sp. NIES-3709 plasmid pGM3709_01, complete sequence) position: , mismatch: 10, identity: 0.722

gcccgttaaaaggtaataacaaagatgtgtattgtg	CRISPR spacer
accagttaaaaggtaataacaaaaatgctttatccc	Protospacer
.** *******************.***. *  * .

8. spacer 2.52|2340146|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 10, identity: 0.722

tcaatgtattttttatttctctttctattattatta	CRISPR spacer
cttgtttattttttctttctctttcttttattgctt	Protospacer
.. .* ******** *********** *****..*

9. spacer 2.52|2340146|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 10, identity: 0.722

tcaatgtattttttatttctctttctattattatta	CRISPR spacer
cttgtttattttttctttctctttcttttattgctt	Protospacer
.. .* ******** *********** *****..*

10. spacer 2.52|2340146|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 10, identity: 0.722

tcaatgtattttttatttctctttctattattatta	CRISPR spacer
cttgtttattttttctttctctttcttttattgctt	Protospacer
.. .* ******** *********** *****..*

11. spacer 2.52|2340146|36|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 10, identity: 0.722

tcaatgtattttttatttctctttctattattatta	CRISPR spacer
cttgtttattttttctttctctttcttttattgctt	Protospacer
.. .* ******** *********** *****..*

12. spacer 2.63|2340882|37|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NC_048807 (Erwinia phage pEp_SNUABM_01, complete genome) position: , mismatch: 11, identity: 0.703

tcttggattgggaatatgtgtatcaatccaatgaatt	CRISPR spacer
ttgccacttgcgaatatgtctatcaatccaatgacgg	Protospacer
*. . . *** ******** **************

13. spacer 2.82|2342152|35|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 11, identity: 0.686

atgcctgcttgtctttaccgaagatgaattttatt	CRISPR spacer
acattatcttgtctttacagaagatgattttttag	Protospacer
*....  *********** ******** ****

14. spacer 2.82|2342152|35|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 11, identity: 0.686

atgcctgcttgtctttaccgaagatgaattttatt	CRISPR spacer
acattatcttgtctttacagaagatgattttttag	Protospacer
*....  *********** ******** ****

15. spacer 2.82|2342152|35|NC_015520|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 11, identity: 0.686

atgcctgcttgtctttaccgaagatgaattttatt	CRISPR spacer
acattatcttgtctttacagaagatgattttttag	Protospacer
*....  *********** ******** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

70309 : 84066

Bacillus_phage(44.44%)

portal,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013779718.1\|70309_72973_-\|tail	phage tail tape measure protein	A0A166XZ24	Gordonia_phage	5.6e-56	47.0
WP_013779719.1\|73175_73547_-	hypothetical protein	NA	NA	NA	NA
WP_013779720.1\|73555_74158_-	hypothetical protein	A0A0A8WJ49	Clostridium_phage	1.7e-08	28.4
WP_171804948.1\|74138_74306_-	hypothetical protein	NA	NA	NA	NA
WP_013779722.1\|74310_74697_-	hypothetical protein	NA	NA	NA	NA
WP_013779723.1\|74693_75026_-	hypothetical protein	G1JWD8	Mycobacterium_phage	2.8e-10	34.3
WP_041643721.1\|75025_75403_-	hypothetical protein	NA	NA	NA	NA
WP_013779725.1\|75389_75761_-	hypothetical protein	NA	NA	NA	NA
WP_013779726.1\|75781_76834_-	hypothetical protein	A0A0N7ACJ3	Bacillus_phage	3.5e-70	43.1
WP_013779727.1\|76849_77188_-	DUF2190 family protein	A0A0A8WJN5	Clostridium_phage	1.3e-18	43.6
WP_013779728.1\|77201_78653_-	hypothetical protein	A0A0N7ACY8	Bacillus_phage	2.0e-63	42.5
WP_171804949.1\|78712_78868_-	hypothetical protein	NA	NA	NA	NA
WP_013779730.1\|78851_79157_-	hypothetical protein	NA	NA	NA	NA
WP_013779731.1\|79125_79350_-	hypothetical protein	NA	NA	NA	NA
WP_013779732.1\|79351_81154_-	hypothetical protein	A0A0N7ACI5	Bacillus_phage	1.6e-43	34.5
WP_013779733.1\|81134_82613_-\|portal	phage portal protein	A0A0N6W8H8	Bacillus_phage	7.3e-90	38.8
WP_013779734.1\|82605_84066_-	hypothetical protein	B6SBS6	Clostridium_virus	5.5e-74	36.3

DBSCAN-SWA_2

589173 : 627648

Bacillus_phage(38.71%)

terminase,tail,integrase,plate,portal

attL 590146:590195|attR 630435:630484

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041644277.1\|589173_590079_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-31	37.4
590146:590195	attL	NA	NA	NA	NA
WP_013780176.1\|590264_591389_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	3.2e-69	39.5
WP_013780177.1\|591440_591866_-	ImmA/IrrE family metallo-endopeptidase	Q0H245	Geobacillus_phage	9.0e-17	38.1
WP_013780178.1\|591882_592248_-	helix-turn-helix transcriptional regulator	I3VYZ1	Thermoanaerobacterium_phage	4.1e-10	40.5
WP_013780179.1\|592479_592704_+	helix-turn-helix transcriptional regulator	I3VYZ1	Thermoanaerobacterium_phage	7.5e-07	44.1
WP_013780180.1\|592718_593399_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013780181.1\|593411_593810_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013780182.1\|593814_593988_+	hypothetical protein	NA	NA	NA	NA
WP_013780183.1\|594057_594303_+	hypothetical protein	NA	NA	NA	NA
WP_013780184.1\|594318_594570_+	hypothetical protein	NA	NA	NA	NA
WP_013780186.1\|594725_594944_+	hypothetical protein	NA	NA	NA	NA
WP_013780187.1\|594957_595512_+	host-nuclease inhibitor Gam family protein	A0A2K9V2U0	Faecalibacterium_phage	9.9e-16	32.5
WP_013780188.1\|595531_596275_+	hypothetical protein	E5DV80	Deep-sea_thermophilic_phage	4.1e-49	59.4
WP_013780190.1\|596478_596781_+	hypothetical protein	NA	NA	NA	NA
WP_013780191.1\|596785_597727_+	DnaD domain protein	A0A193GZ86	Enterobacter_phage	6.0e-05	30.4
WP_013780192.1\|597723_599061_+	AAA family ATPase	A0A1B0VG30	Salmonella_phage	4.5e-46	33.7
WP_013780193.1\|598999_599197_+	hypothetical protein	NA	NA	NA	NA
WP_013780195.1\|599299_599671_+	hypothetical protein	A8AU00	Listeria_phage	5.4e-18	42.0
WP_013780196.1\|599672_599876_+	hypothetical protein	NA	NA	NA	NA
WP_013780197.1\|599865_600015_+	hypothetical protein	NA	NA	NA	NA
WP_013780198.1\|600004_600289_+	hypothetical protein	NA	NA	NA	NA
WP_013780199.1\|600288_600483_+	hypothetical protein	NA	NA	NA	NA
WP_171804955.1\|600479_600656_+	hypothetical protein	NA	NA	NA	NA
WP_013780200.1\|600627_601074_+	DUF1492 domain-containing protein	NA	NA	NA	NA
WP_013780202.1\|601436_601949_+\|terminase	terminase small subunit	A0A2K9V3C4	Faecalibacterium_phage	2.7e-36	62.4
WP_013780203.1\|601941_603327_+	DEAD/DEAH box helicase family protein	B6SBS6	Clostridium_virus	6.8e-122	49.8
WP_013780204.1\|603319_604831_+\|portal	phage portal protein	A0A0N6W8H8	Bacillus_phage	4.7e-161	55.9
WP_013780205.1\|604834_606514_+	hypothetical protein	A0A0N7ACI5	Bacillus_phage	7.0e-81	46.7
WP_013780206.1\|606514_606739_+	hypothetical protein	NA	NA	NA	NA
WP_041643800.1\|606716_608201_+	hypothetical protein	A0A0N7ACY8	Bacillus_phage	1.5e-87	48.5
WP_013780208.1\|608197_608383_+	hypothetical protein	NA	NA	NA	NA
WP_013780209.1\|608397_608781_+	DUF2190 family protein	A0A0A8WJN5	Clostridium_phage	1.3e-19	46.2
WP_013780210.1\|608800_609844_+	hypothetical protein	A0A0N7ACJ3	Bacillus_phage	3.6e-67	40.1
WP_013780212.1\|610021_610366_+	hypothetical protein	A0A0N7ACH0	Bacillus_phage	6.5e-26	54.9
WP_013780213.1\|610368_610749_+	hypothetical protein	NA	NA	NA	NA
WP_171804996.1\|610759_611077_+	hypothetical protein	A0A0A8WFF6	Clostridium_phage	2.6e-13	37.3
WP_013780215.1\|611079_611910_+	hypothetical protein	A0A0N7ACG6	Bacillus_phage	8.3e-51	40.7
WP_013780216.1\|611914_612142_+	hypothetical protein	NA	NA	NA	NA
WP_013780217.1\|612141_613593_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0N7AEC6	Bacillus_phage	7.6e-92	40.5
WP_013780218.1\|613606_614026_+\|tail	phage tail tube protein	A0A2H4J032	uncultured_Caudovirales_phage	1.2e-18	39.1
WP_013780219.1\|614029_614455_+	XkdN-like protein	A0A2H4J883	uncultured_Caudovirales_phage	6.0e-21	42.6
WP_013780220.1\|614472_614631_+	hypothetical protein	NA	NA	NA	NA
WP_013780221.1\|614620_617998_+	tape measure protein	U5PX90	Bacillus_virus	6.7e-22	32.4
WP_013780222.1\|618068_619346_+	DUF4190 domain-containing protein	NA	NA	NA	NA
WP_013780223.1\|619416_620052_+	LysM peptidoglycan-binding domain-containing protein	A0A0N7ACF7	Bacillus_phage	1.1e-47	51.0
WP_013780224.1\|620048_621023_+	hypothetical protein	A0A0N6W8H4	Bacillus_phage	2.0e-56	38.9
WP_013780225.1\|621012_621348_+	hypothetical protein	A0A2H4J746	uncultured_Caudovirales_phage	1.9e-17	43.4
WP_013780226.1\|621349_621799_+	DUF2634 domain-containing protein	A0A0N7ACH4	Bacillus_phage	4.8e-29	45.8
WP_013780227.1\|621798_623367_+\|plate	baseplate J/gp47 family protein	A0A0N7ACK1	Bacillus_phage	2.3e-33	36.1
WP_013780228.1\|623363_623933_+	YmfQ family protein	A0A0A7RTU9	Clostridium_phage	4.7e-21	34.4
WP_013780229.1\|623932_624994_+	hypothetical protein	NA	NA	NA	NA
WP_013780230.1\|624977_626144_+	hypothetical protein	NA	NA	NA	NA
WP_013780231.1\|626156_626489_+	hypothetical protein	NA	NA	NA	NA
WP_013780232.1\|626491_626626_+	XkdX family protein	NA	NA	NA	NA
WP_013780233.1\|626640_626877_+	hypothetical protein	NA	NA	NA	NA
WP_013780234.1\|626883_627648_+	N-acetylmuramoyl-L-alanine amidase	A0A1J1JCJ2	Escherichia_phage	2.4e-12	27.3
630435:630484	attR	NA	NA	NA	NA

DBSCAN-SWA_3

966980 : 978054

Bacillus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013780558.1\|966980_969140_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	U5J9N6	Bacillus_phage	4.1e-17	41.4
WP_013780559.1\|969136_969772_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_013780560.1\|969800_969971_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_013780561.1\|970033_971296_+\|tRNA	histidine--tRNA ligase	A0A2I2L577	Orpheovirus	5.2e-28	24.6
WP_013780562.1\|971307_973095_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	2.0e-17	26.5
WP_013780563.1\|973411_974131_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	A0A291ATS8	Pandoravirus	9.5e-27	36.9
WP_041644346.1\|974236_974518_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_013780565.1\|974527_974995_+	SoxR reducing system RseC family protein	NA	NA	NA	NA
WP_013780566.1\|974987_975317_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	6.3e-18	42.7
WP_013780567.1\|975450_976704_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.4e-97	52.1
WP_013780568.1\|976719_978054_+	AAA family ATPase	G3MBE0	Bacillus_virus	1.2e-115	51.2

DBSCAN-SWA_4

1468617 : 1476065

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013781012.1\|1468617_1469568_+	AAA family ATPase	G3MAX6	Bacillus_virus	1.2e-50	44.4
WP_041643931.1\|1469564_1470158_+	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_013781014.1\|1470290_1470794_+	DUF4829 domain-containing protein	NA	NA	NA	NA
WP_013781015.1\|1470949_1471573_-	transcriptional repressor LexA	A0A1B1P7Q3	Bacillus_phage	1.2e-12	52.9
WP_013781016.1\|1471766_1472051_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_041643934.1\|1472057_1473038_-	tyrosine recombinase XerC	A0A1B1P7C7	Bacillus_phage	1.1e-22	31.9
WP_013781018.1\|1473058_1473487_-	ribonuclease HI	A0A1P8DJF0	Virus_Rctr71	1.5e-32	49.3
WP_049783396.1\|1473492_1474260_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	6.8e-39	42.8
WP_013781020.1\|1474313_1476065_-	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	1.7e-08	31.8

DBSCAN-SWA_5

1716814 : 1729623

Synechococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013781240.1\|1716814_1718359_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG3	Prochlorococcus_phage	5.7e-45	52.1
WP_013781241.1\|1718656_1719280_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.7e-22	40.5
WP_013781242.1\|1719276_1720284_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	5.7e-70	42.9
WP_013781243.1\|1720284_1721760_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.6e-58	35.6
WP_013781244.1\|1721720_1723928_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-161	41.3
WP_013781245.1\|1723917_1724628_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_013781246.1\|1724630_1724879_-	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	7.1e-06	38.0
WP_013781247.1\|1724879_1725590_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FGF0	Synechococcus_phage	1.2e-42	42.6
WP_013781248.1\|1725586_1726084_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-24	44.7
WP_148258480.1\|1726157_1727507_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.8e-32	28.8
WP_083809940.1\|1727888_1728035_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_013781251.1\|1728087_1729623_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	7.5e-21	28.9

DBSCAN-SWA_6

2597728 : 2603133

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013782039.1\|2597728_2598139_-	single-stranded DNA-binding protein	E5DV85	Deep-sea_thermophilic_phage	1.4e-22	54.3
WP_013782040.1\|2598267_2598789_-	hypothetical protein	NA	NA	NA	NA
WP_013782041.1\|2599123_2599792_-	helix-turn-helix domain-containing protein	Q786F1	Bacillus_phage	2.6e-10	42.4
WP_041644662.1\|2600045_2600264_+	helix-turn-helix domain-containing protein	I3VYY8	Thermoanaerobacterium_phage	1.9e-07	48.5
WP_013782043.1\|2600278_2601268_+	hypothetical protein	A0A2P1JTY8	Anoxybacillus_phage	1.3e-31	52.7
WP_013782044.1\|2601257_2601935_+	ATP-binding protein	A0A1B1P7U2	Bacillus_phage	3.2e-24	36.5
WP_013782045.1\|2601939_2602281_+	hypothetical protein	NA	NA	NA	NA
WP_013782046.1\|2602308_2603133_+	DUF5131 family protein	G8EY42	Synechococcus_phage	5.6e-31	33.2

DBSCAN-SWA_7

2921400 : 3004391

Erysipelothrix_phage(73.81%)

terminase,tail,protease,capsid,holin,head,portal,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041644168.1\|2921400_2922174_+\|transposase	transposase	NA	NA	NA	NA
WP_013782309.1\|2922675_2923776_-	DUF362 domain-containing protein	NA	NA	NA	NA
WP_013782310.1\|2923875_2924574_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_013782311.1\|2924710_2925460_-	PIG-L family deacetylase	NA	NA	NA	NA
WP_013782312.1\|2925546_2926767_-	MFS transporter	NA	NA	NA	NA
WP_083809928.1\|2927003_2927303_+	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	9.7e-18	74.2
WP_041644169.1\|2927422_2927680_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_013782314.1\|2928147_2928567_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_013782315.1\|2928924_2929485_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_041644172.1\|2929796_2930102_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_013782316.1\|2930203_2931085_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_013782317.1\|2931100_2932000_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_013782318.1\|2932113_2933850_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_049783373.1\|2933968_2935138_-	hypothetical protein	NA	NA	NA	NA
WP_013782320.1\|2935121_2936522_-	trimethylamine methyltransferase family protein	NA	NA	NA	NA
WP_013782321.1\|2936546_2937557_-	SIS domain-containing protein	M1HHR4	Paramecium_bursaria_Chlorella_virus	3.0e-18	28.6
WP_013782322.1\|2937577_2938855_-	alpha-galactosidase	NA	NA	NA	NA
WP_013782323.1\|2938857_2939994_-	hypothetical protein	NA	NA	NA	NA
WP_013782324.1\|2940009_2941200_-	ROK family transcriptional regulator	NA	NA	NA	NA
WP_041644175.1\|2941459_2941969_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_013782325.1\|2941986_2942370_-	cytidine deaminase	NA	NA	NA	NA
WP_013782326.1\|2942426_2942915_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_041644743.1\|2942914_2944177_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_013782328.1\|2944178_2945750_-	citramalate synthase	NA	NA	NA	NA
WP_013782329.1\|2945770_2947285_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	6.1e-07	29.0
WP_013782330.1\|2947303_2948305_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_013782331.1\|2948372_2948864_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_013779793.1\|2949297_2950635_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_148258505.1\|2951144_2953211_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	5.3e-14	25.1
WP_013782333.1\|2953764_2954181_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_013782334.1\|2954338_2955319_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.3e-05	27.3
WP_041644745.1\|2955388_2956561_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_013782336.1\|2956586_2957012_+	cupin domain-containing protein	NA	NA	NA	NA
WP_013782337.1\|2957016_2957337_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_013782338.1\|2957343_2957901_+	flavin reductase family protein	NA	NA	NA	NA
WP_013782339.1\|2958098_2958413_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013782340.1\|2958505_2959519_+	permease	NA	NA	NA	NA
WP_013782341.1\|2959534_2960299_+	DUF2703 domain-containing protein	NA	NA	NA	NA
WP_013782342.1\|2960335_2960683_+	TM0996/MTH895 family glutaredoxin-like protein	NA	NA	NA	NA
WP_003868548.1\|2960838_2961324_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_004103231.1\|2961481_2961946_-	signal peptidase II	NA	NA	NA	NA
WP_013782343.1\|2962032_2964393_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	5.2e-114	35.4
WP_005584884.1\|2964406_2964781_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	7.4e-15	40.2
WP_013782344.1\|2965397_2966966_-	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	5.8e-170	57.7
WP_083809929.1\|2966928_2967420_-	recombinase	A0A2K5B2B3	Erysipelothrix_phage	1.2e-20	40.9
WP_013782346.1\|2967383_2968952_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	2.4e-152	52.9
WP_013782347.1\|2969013_2969232_-	hypothetical protein	NA	NA	NA	NA
WP_013782348.1\|2969285_2970290_-	N-acetylmuramoyl-L-alanine amidase	H7BV89	unidentified_phage	1.0e-10	66.0
WP_004400092.1\|2970286_2970706_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	4.6e-50	69.1
WP_013782349.1\|2970792_2973261_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	68.6
WP_003868535.1\|2973257_2973833_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	3.6e-53	53.4
WP_013782350.1\|2974047_2976570_-\|tail	phage tail protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	63.5
WP_013782351.1\|2976574_2977348_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	7.2e-73	51.2
WP_013782352.1\|2977361_2979548_-	hypothetical protein	A0A2K5B297	Erysipelothrix_phage	1.1e-12	41.2
WP_003516030.1\|2979763_2980147_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	8.9e-40	68.8
WP_013782353.1\|2980146_2980746_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	6.8e-79	74.2
WP_013782354.1\|2980751_2981096_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	5.7e-30	55.0
WP_003516027.1\|2981092_2981524_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	4.2e-46	62.9
WP_013782355.1\|2981538_2981874_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	1.0e-28	57.8
WP_013782356.1\|2981876_2982185_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	2.3e-38	75.5
WP_013297316.1\|2982206_2983409_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	4.9e-177	78.2
WP_013782357.1\|2983422_2984148_-\|protease	Clp protease ClpP	A0A2K5B288	Erysipelothrix_phage	1.1e-75	64.1
WP_013782358.1\|2984086_2985409_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	1.4e-188	75.2
WP_013782359.1\|2985405_2987058_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	1.7e-249	77.2
WP_004400074.1\|2987112_2987307_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_013782360.1\|2987310_2987778_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_013782361.1\|2987839_2988739_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	3.9e-54	41.1
WP_013782362.1\|2988880_2989111_-	DUF4314 domain-containing protein	NA	NA	NA	NA
WP_013782363.1\|2989107_2989443_-	hypothetical protein	NA	NA	NA	NA
WP_013782364.1\|2989435_2990128_-	virulence factor	A0A2K5B280	Erysipelothrix_phage	6.3e-28	35.2
WP_013782365.1\|2990244_2991498_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	3.0e-100	46.5
WP_013782366.1\|2991503_2992802_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	6.2e-77	40.3
WP_013782368.1\|2992958_2993510_-\|terminase	P27 family phage terminase small subunit	A0A2K5B277	Erysipelothrix_phage	7.7e-69	67.0
WP_013782369.1\|2993610_2993988_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	1.6e-41	66.4
WP_013782370.1\|2994116_2994566_-	hypothetical protein	NA	NA	NA	NA
WP_013782371.1\|2994562_2995918_-	DEAD/DEAH box helicase	A0A2K5B273	Erysipelothrix_phage	2.8e-165	70.8
WP_013782372.1\|2995898_2996180_-	VRR-NUC domain-containing protein	D0R0B7	Streptococcus_phage	1.5e-23	57.0
WP_013782373.1\|2996410_2998798_-	virulence-associated E family protein	A0A1W6JQ82	Corynebacterium_phage	6.7e-210	46.7
WP_013782374.1\|2998794_2999220_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	6.6e-36	47.9
WP_013782375.1\|2999221_2999500_-	hypothetical protein	NA	NA	NA	NA
WP_013782376.1\|2999501_3000302_-	phage antirepressor KilAC domain-containing protein	A0A0B5A507	Paenibacillus_phage	5.5e-60	46.1
WP_013782377.1\|3000389_3002363_-	hypothetical protein	A0A2K5B2B0	Erysipelothrix_phage	5.4e-258	66.5
WP_013782378.1\|3002359_3002938_-	DUF2815 family protein	A0A2K5B2A9	Erysipelothrix_phage	2.2e-66	71.1
WP_013782379.1\|3002934_3004071_-	DUF2800 domain-containing protein	A0A2K5B2A8	Erysipelothrix_phage	1.4e-146	69.8
WP_013782380.1\|3004067_3004391_-	hypothetical protein	A0A2K5B2A7	Erysipelothrix_phage	2.5e-19	54.7

DBSCAN-SWA_8

3059140 : 3092273

Erysipelothrix_phage(17.39%)

terminase,tail,protease,integrase,capsid,head,portal

attL 3041257:3041301|attR 3060355:3060399

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3041257:3041301	attL	NA	NA	NA	NA
WP_013782420.1\|3059140_3060274_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	2.1e-60	41.6
WP_013782421.1\|3060494_3060776_-	LexA family transcriptional regulator	NA	NA	NA	NA
3060355:3060399	attR	NA	NA	NA	NA
WP_013782422.1\|3060905_3062012_+	DUF5009 domain-containing protein	NA	NA	NA	NA
WP_013782423.1\|3062063_3062834_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_013782424.1\|3062871_3063570_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_013782425.1\|3063562_3063730_-	hypothetical protein	NA	NA	NA	NA
WP_013782426.1\|3063746_3064013_-	hypothetical protein	A0A0A7AR38	Bacillus_phage	8.4e-05	37.3
WP_013782427.1\|3064073_3064778_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	7.6e-45	51.5
WP_013782428.1\|3064787_3065033_-	hypothetical protein	NA	NA	NA	NA
WP_148258508.1\|3065049_3067479_-	hypothetical protein	A0A2K5B2A1	Erysipelothrix_phage	2.7e-158	38.1
WP_013782430.1\|3067472_3068066_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	5.1e-10	25.3
WP_013782431.1\|3068058_3068250_-	hypothetical protein	W8ECV6	Geobacillus_phage	1.2e-08	58.7
WP_013782432.1\|3068254_3069631_-\|tail	phage tail protein	W8EEW0	Geobacillus_phage	1.6e-83	38.7
WP_013782433.1\|3069630_3070575_-	hypothetical protein	NA	NA	NA	NA
WP_013782434.1\|3070574_3071396_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	8.9e-13	26.1
WP_013782435.1\|3071392_3073561_-\|tail	phage tail tape measure protein	A0A068F1L4	Mycobacterium_phage	9.5e-54	35.8
WP_171804991.1\|3073553_3073817_-	hypothetical protein	NA	NA	NA	NA
WP_013782437.1\|3073906_3074221_-	hypothetical protein	NA	NA	NA	NA
WP_013782438.1\|3074236_3074644_-	hypothetical protein	NA	NA	NA	NA
WP_013782439.1\|3074659_3075031_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_013782440.1\|3075042_3075420_-	HK97 gp10 family phage protein	A0A1W6JP15	Morganella_phage	2.8e-06	30.1
WP_013782441.1\|3075419_3075740_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	1.0e-17	45.3
WP_013782442.1\|3075739_3076321_-\|head,tail	phage head-tail connector protein	A0A2H4J8C5	uncultured_Caudovirales_phage	6.3e-05	51.4
WP_013782443.1\|3076323_3076509_-	hypothetical protein	NA	NA	NA	NA
WP_013782444.1\|3076556_3077759_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	1.3e-116	57.7
WP_013782445.1\|3077763_3078729_-\|head,protease	HK97 family phage prohead protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	2.5e-30	44.0
WP_013782446.1\|3078803_3078995_-	hypothetical protein	NA	NA	NA	NA
WP_171804992.1\|3078963_3081327_-\|portal	phage portal protein	A0A142K630	Streptomyces_phage	1.8e-122	39.6
WP_013782448.1\|3082980_3083457_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	5.9e-33	49.1
WP_013782449.1\|3083548_3083899_-	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	4.6e-19	44.4
WP_041644187.1\|3083957_3084383_-	hypothetical protein	NA	NA	NA	NA
WP_013782451.1\|3084693_3085107_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_013782452.1\|3085107_3085296_-	hypothetical protein	NA	NA	NA	NA
WP_013782453.1\|3085292_3085640_-	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	4.0e-07	29.4
WP_013782454.1\|3085664_3085910_-	hypothetical protein	NA	NA	NA	NA
WP_013782455.1\|3085881_3086112_-	hypothetical protein	NA	NA	NA	NA
WP_148258509.1\|3086111_3086462_-	hypothetical protein	NA	NA	NA	NA
WP_013782457.1\|3086476_3087163_-	ATP-binding protein	A0A1B1P7U2	Bacillus_phage	8.8e-22	33.2
WP_013782458.1\|3087181_3088078_-	replication protein	A0A1W6JNY0	Morganella_phage	2.1e-07	33.3
WP_013782459.1\|3088159_3089023_-	hypothetical protein	E5DV80	Deep-sea_thermophilic_phage	2.1e-20	35.1
WP_013782460.1\|3089096_3089306_-	hypothetical protein	NA	NA	NA	NA
WP_013782461.1\|3089302_3089524_-	hypothetical protein	NA	NA	NA	NA
WP_013782462.1\|3089527_3089911_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013782463.1\|3089926_3090163_-	hypothetical protein	NA	NA	NA	NA
WP_013782464.1\|3090176_3090434_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013782465.1\|3090599_3090983_+	helix-turn-helix transcriptional regulator	A0A0A8WFG2	Clostridium_phage	2.6e-15	45.5
WP_013782466.1\|3091026_3091386_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_013782467.1\|3091382_3092273_+	ribonuclease H-like domain-containing protein	A0A0A7RWA3	Clostridium_phage	2.4e-32	39.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_015520

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection