CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007530	Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20 chromosome, complete genome	2 crisprs	DinG,cas3,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT	1	23	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007530_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007530_1

2646623-2648115

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

24 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP007530_1

>merge|NZ_CP007530|1|2646623-2648115|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACATTTTTTAGAGGTGTACACACCGTCGGCCTTTTGCGGTTTATCCCCGCTGGCGCGGGGAACACTTGGTTTTTTAATACTTTCTGGTTGCACTGTTCGGTTTATCCCCGCTGGCGCGGGGAACACTTCCTGAATTCTTCAGATCAACTAAATAATTCCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCATTGCCAGTTCGCCGTTGCAGTGCTCGTCGGTTTATCCCCGCTGGCGCGGGGAACACTGTATAAAGCCGTTCTCAACGTCCTGTGGAACCGGTTTATCCCCGCTGGCGCGGGGAACACTAGCGCAAATTTTGCGAATTATGCACTGTTTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGTATATCCGGCCCCTGATTGCTGGTGGATAACGGTTTATCCCCGCTGGCGCGGGGAACACACAATTACATAACAGGTGTGACAGACGGCGGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGTCGTGACCAGCGGGCGCCGCTGTGAGGCCCGGTTTATCCCCGCTGGCGCGGGGAACACATCGCCACATGCGACGCCTCTTTTTTCTGTACCGGTTTATCCCCGCTGGCGCGGGGAACACTTCTGTTTCACCGTCACGGCCTCGGCCGGGAGCGGTTTATCCCCGCTGGCGCGGGGAACACAATTCATATAGAGCCAATGTATAATTGGCGTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTTTTCAGTAATTGATTTCGCTATTGTGTCAACGGTTTATCCCCGCTGGCGCGGGGAACACGAAAGAATTGGAATTTGCCATTACGCAGAGTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGTCCGCTTTTGGGGTGAACAATCGTGACCGGCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGGTGTCCGACACATAACGGAGAGATAAACCGGTTTATCCCCGCTGGCGCGGGGAACACCTGGCCATAATTGACTGATATCGAGCTTTGGTCGGTTTATCCCCGCTGGCGCGGGGAACACTTTAAAGAGCTGGCTGCTGATGTGGATCGGATCGGTTTATCCCCGCTGGCGCGGGGAACACTACGCCGTCCTGCTCCGCAAGAAAAACAACTCCGGTTTATCCCCGCTGGCGCGGGGAACACGCGCTTAAACCGGTTTTTATTAATGTTGTTTTCGGTTTATCCCCGCTGGCGCGGGGAACACTTTGGTGTCCGACACATAACGGAGAGATAAACCGGTTTATCCCCGCTGGCGCGGGGAACACATTTCCCCCAACATCCATTGGGCGCTACCTACCGGTTTATCCCCGCTGGCGCGGGGAACACCCCGGATAACCTTTCCCTCCCTGACGAGCTCGCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTCGCCAGGCTTTCCGCTCACACCGCGACCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|1|1|2646623-2648115|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTTAGAGGTGTACACACCGTCGGCCTTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCCTGAATTCTTCAGATCAACTAAATAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCATTGCCAGTTCGCCGTTGCAGTGCTCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATAAAGCCGTTCTCAACGTCCTGTGGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGCGCAAATTTTGCGAATTATGCACTGTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATATCCGGCCCCTGATTGCTGGTGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACAATTACATAACAGGTGTGACAGACGGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTCGTGACCAGCGGGCGCCGCTGTGAGGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGCCACATGCGACGCCTCTTTTTTCTGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGTTTCACCGTCACGGCCTCGGCCGGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTCATATAGAGCCAATGTATAATTGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTTTTCAGTAATTGATTTCGCTATTGTGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAAGAATTGGAATTTGCCATTACGCAGAGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTCCGCTTTTGGGGTGAACAATCGTGACCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGCCATAATTGACTGATATCGAGCTTTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTAAAGAGCTGGCTGCTGATGTGGATCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCGTCCTGCTCCGCAAGAAAAACAACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTTAAACCGGTTTTTATTAATGTTGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTCCCCCAACATCCATTGGGCGCTACCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGATAACCTTTCCCTCCCTGACGAGCTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTCGCCAGGCTTTCCGCTCACACCGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|1|1|2646623-2648115|CRT
GTGTTTATCCCCGCTGACGCGGGGAACAT	TTTTTAGAGGTGTACACACCGTCGGCCTTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCCTGAATTCTTCAGATCAACTAAATAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCATTGCCAGTTCGCCGTTGCAGTGCTCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATAAAGCCGTTCTCAACGTCCTGTGGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGCGCAAATTTTGCGAATTATGCACTGTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATATCCGGCCCCTGATTGCTGGTGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACAATTACATAACAGGTGTGACAGACGGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTCGTGACCAGCGGGCGCCGCTGTGAGGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGCCACATGCGACGCCTCTTTTTTCTGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGTTTCACCGTCACGGCCTCGGCCGGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTCATATAGAGCCAATGTATAATTGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTTTTCAGTAATTGATTTCGCTATTGTGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAAGAATTGGAATTTGCCATTACGCAGAGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTCCGCTTTTGGGGTGAACAATCGTGACCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGCCATAATTGACTGATATCGAGCTTTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTAAAGAGCTGGCTGCTGATGTGGATCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCGTCCTGCTCCGCAAGAAAAACAACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTTAAACCGGTTTTTATTAATGTTGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTCCCCCAACATCCATTGGGCGCTACCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGATAACCTTTCCCTCCCTGACGAGCTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTCGCCAGGCTTTCCGCTCACACCGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|1|1|2646684-2648115|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGTTTTTTAATACTTTCTGGTTGCACTGTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCCTGAATTCTTCAGATCAACTAAATAATTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCATTGCCAGTTCGCCGTTGCAGTGCTCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATAAAGCCGTTCTCAACGTCCTGTGGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TAGCGCAAATTTTGCGAATTATGCACTGTTTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTATATCCGGCCCCTGATTGCTGGTGGATAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ACAATTACATAACAGGTGTGACAGACGGCGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGGTCGTGACCAGCGGGCGCCGCTGTGAGGCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCGCCACATGCGACGCCTCTTTTTTCTGTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCTGTTTCACCGTCACGGCCTCGGCCGGGAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AATTCATATAGAGCCAATGTATAATTGGCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTTTTCAGTAATTGATTTCGCTATTGTGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GAAAGAATTGGAATTTGCCATTACGCAGAGTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTCCGCTTTTGGGGTGAACAATCGTGACCGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGGCCATAATTGACTGATATCGAGCTTTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTAAAGAGCTGGCTGCTGATGTGGATCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TACGCCGTCCTGCTCCGCAAGAAAAACAACTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCGCTTAAACCGGTTTTTATTAATGTTGTTTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTGGTGTCCGACACATAACGGAGAGATAAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTTCCCCCAACATCCATTGGGCGCTACCTAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCCGGATAACCTTTCCCTCCCTGACGAGCTCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTCGCCAGGCTTTCCGCTCACACCGCGAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007530.1\|WP_000206423.1\|2650810_2651869_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP007530.1\|WP_001145535.1\|2657106_2658060_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007530.1\|WP_001518648.1\|2648211_2648505_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP007530.1\|WP_001290667.1\|2658957_2660670_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP007530.1\|WP_001543221.1\|2641987_2642311_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP007530.1\|WP_000281480.1\|2649421_2650072_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP007530.1\|WP_001173661.1\|2642361_2642967_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP007530.1\|WP_000085108.1\|2650053_2650800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP007530.1\|WP_000134246.1\|2639231_2640281_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP007530.1\|WP_000741649.1\|2640756_2641467_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP007530.1\|WP_000517480.1\|2641485_2641797_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP007530.1\|WP_000368577.1\|2652427_2653987_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007530.1\|WP_000080401.1\|2658147_2658882_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007530.1\|WP_000029524.1\|2651882_2652431_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP007530.1\|WP_001092259.1\|2642953_2644393_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP007530.1\|WP_001219244.1\|2640277_2640757_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP007530.1\|WP_000490483.1\|2645561_2646608_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP007530.1\|WP_000144832.1\|2648504_2649425_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP007530.1\|WP_001221538.1\|2638489_2639251_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP007530.1\|WP_000372384.1\|2644402_2645311_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
NZ_CP007530.1\|WP_000206423.1\|2650810_2651869_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.89551e-135
NZ_CP007530.1\|WP_001145535.1\|2657106_2658060_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007530.1\|WP_001518648.1\|2648211_2648505_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP007530.1\|WP_001290667.1\|2658957_2660670_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP007530.1\|WP_001543221.1\|2641987_2642311_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.09505e-47
NZ_CP007530.1\|WP_000281480.1\|2649421_2650072_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.41953e-75
NZ_CP007530.1\|WP_001173661.1\|2642361_2642967_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.53293e-145
NZ_CP007530.1\|WP_000085108.1\|2650053_2650800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.18709e-48
NZ_CP007530.1\|WP_000134246.1\|2639231_2640281_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP007530.1\|WP_000741649.1\|2640756_2641467_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP007530.1\|WP_000517480.1\|2641485_2641797_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP007530.1\|WP_000368577.1\|2652427_2653987_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	2.04216e-172
NZ_CP007530.1\|WP_000080401.1\|2658147_2658882_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.84911e-136
NZ_CP007530.1\|WP_000029524.1\|2651882_2652431_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.97309e-33
NZ_CP007530.1\|WP_001092259.1\|2642953_2644393_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP007530.1\|WP_001219244.1\|2640277_2640757_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP007530.1\|WP_000490483.1\|2645561_2646608_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP007530.1\|WP_000144832.1\|2648504_2649425_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.21084e-157
NZ_CP007530.1\|WP_001221538.1\|2638489_2639251_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP007530.1\|WP_000372384.1\|2644402_2645311_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>NZ_CP007530.1|WP_000490483.1|2645561_2646608_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALVIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP007530.1|WP_000372384.1|2644402_2645311_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP007530.1|WP_001092259.1|2642953_2644393_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEAYAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP007530.1|WP_001173661.1|2642361_2642967_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCCDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP007530.1|WP_001543221.1|2641987_2642311_-|DUF3561-family-protein
MRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGMPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP007530.1|WP_000517480.1|2641485_2641797_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP007530.1|WP_000741649.1|2640756_2641467_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP007530.1|WP_001219244.1|2640277_2640757_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP007530.1|WP_000134246.1|2639231_2640281_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP007530.1|WP_001221538.1|2638489_2639251_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP007530.1|WP_001518648.1|2648211_2648505_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP007530.1|WP_000144832.1|2648504_2649425_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP007530.1|WP_000281480.1|2649421_2650072_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALEWLVRQGEQNGFTLREASVDAYRQQQIRREKSRQMIQFSSVDYTGVLVINDPALFLQRLAQGYGKSRAFGCGMMMIKPGEDA
>NZ_CP007530.1|WP_000085108.1|2650053_2650800_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGRAPDALREAYRQYQDKFNALRLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLSKEDACISQE
>NZ_CP007530.1|WP_000206423.1|2650810_2651869_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP007530.1|WP_000029524.1|2651882_2652431_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP007530.1|WP_000368577.1|2652427_2653987_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNGDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP007530.1|WP_001145535.1|2657106_2658060_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007530.1|WP_000080401.1|2658147_2658882_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETSAQLETLTAEERVVWALKNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP007530.1|WP_001290667.1|2658957_2660670_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTTYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

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Crispr_ID: NZ_CP007530_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007530_2

2664250-2665316

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

17 spacers

cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NZ_CP007530_2

>merge|NZ_CP007530|2|2664250-2665316|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACCAAAAATCGTTGCGCCAGTGGAAATGGTATGGCGGTTTATCCCCGCTGGCGCGGGGAACACATTAAAATGCCTGTCCGCCTGGCTCATTTGCGCGGTTTATCCCCGCTGGCGCGGGGAACACAGCGACGACGCCGTCATCACCGGTGACTGTGACGGTTTATCCCCGCTGGCGCGGGGAACACATATTCAGGCATTTAAAACTGCGCAATTATTTCGGTTTATCCCCGCTGGCGCGGGGAACACATATCTTCAATAAGGTTGAGTTGATACTCACTCGGTTTATCCCCGCTGGCGCGGGGAACACGTTACCAGAACCAAGCACGCTGTTACCTGTCCCGGTTTATCCCCGCTGGCGCGGGGAACACAACGCGTGCGTTGCCACCCCCTCACGGATCATCGGTTTATCCCCGCTGGCGCGGGGAACACTTCATTTTTACCGGGTGGATTTCATAAATCGTCGGTTTATCCCCGCTGGCGCGGGGAACACGGCAGCGCAGGCCGCTTTATTTAGCAATTCAGCCGGTTTATCCCCGCTGGCGCGGGGAACACGACACTCCCAGATATTCACGCTGGGGGATCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCGGTAGTTCGCCGACAGATTGCGGACAGTGGTCGGTTTATCCCCGCTGGCGCGGGGAACACAAATAACCTCTGACATTGTGGGGAAAGGTGAACGGTTTATCCCCGCTGGCGCGGGGAACACGCTATGGAGGCATGGAACGCCTGCCGCACCGCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGGGGATATCCCCCAGTTGAGCTACTCGGATCGGTTTATCCCCGCTGGCGCGGGGAACACGATATCAGCCGAGAAACGCTCAATTGCGGACACGGTTTATCCCCGCTGGCGCGGGGAACACATTACCAACGTCAGATGACGCGAAACCTGAACCGGTTTATCCCCGCTGGCGCGGGGAACACTCGTCAATCCACGCGAATATGATCGCCTGACCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|2|2|2664250-2665316|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	CAAAAATCGTTGCGCCAGTGGAAATGGTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTAAAATGCCTGTCCGCCTGGCTCATTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGACGACGCCGTCATCACCGGTGACTGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCAGGCATTTAAAACTGCGCAATTATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATCTTCAATAAGGTTGAGTTGATACTCACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACCAGAACCAAGCACGCTGTTACCTGTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGCGTGCGTTGCCACCCCCTCACGGATCAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTACCGGGTGGATTTCATAAATCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGCAGGCCGCTTTATTTAGCAATTCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACTCCCAGATATTCACGCTGGGGGATCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGTAGTTCGCCGACAGATTGCGGACAGTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATAACCTCTGACATTGTGGGGAAAGGTGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATGGAGGCATGGAACGCCTGCCGCACCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGGATATCCCCCAGTTGAGCTACTCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATCAGCCGAGAAACGCTCAATTGCGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACCAACGTCAGATGACGCGAAACCTGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTCAATCCACGCGAATATGATCGCCTGACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|2|2|2664250-2665316|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	CAAAAATCGTTGCGCCAGTGGAAATGGTATGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTAAAATGCCTGTCCGCCTGGCTCATTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGCGACGACGCCGTCATCACCGGTGACTGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATTCAGGCATTTAAAACTGCGCAATTATTT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATATCTTCAATAAGGTTGAGTTGATACTCACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTACCAGAACCAAGCACGCTGTTACCTGTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AACGCGTGCGTTGCCACCCCCTCACGGATCAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTACCGGGTGGATTTCATAAATCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGCAGGCCGCTTTATTTAGCAATTCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACTCCCAGATATTCACGCTGGGGGATCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGTAGTTCGCCGACAGATTGCGGACAGTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATAACCTCTGACATTGTGGGGAAAGGTGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATGGAGGCATGGAACGCCTGCCGCACCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGGATATCCCCCAGTTGAGCTACTCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATCAGCCGAGAAACGCTCAATTGCGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACCAACGTCAGATGACGCGAAACCTGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTCAATCCACGCGAATATGATCGCCTGACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP007530|2|2|2664311-2664585|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	TAAAATGCCTGTCCGCCTGGCTCATTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACACAG	CGACGACGCCGTCATCACCGGTGACTGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	ATTCAGGCATTTAAAACTGCGCAATTATTT
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	ATCTTCAATAAGGTTGAGTTGATACTCACT
CGGTTTATCCCCGCTGGCGCGGGGAACACGTTACCAGAACCAAGCACGCTGTTACCTGTCCCGGTTTATCCCCGCTGGCGCGGGGAACACAACGCGTGCGTTGCCACCCCCTCACGGATCATCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTACCGGGTGGATTTCATAAATCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGCAGGCCGCTTTATTTAGCAATTCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACTCCCAGATATTCACGCTGGGGGATCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGTAGTTCGCCGACAGATTGCGGACAGTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATAACCTCTGACATTGTGGGGAAAGGTGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATGGAGGCATGGAACGCCTGCCGCACCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGGATATCCCCCAGTTGAGCTACTCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATCAGCCGAGAAACGCTCAATTGCGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACCAACGTCAGATGACGCGAAACCTGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTCAATCCACGCGAATATGATCGCCTGACC


>NZ_CP007530|2|3|2664677-2665316|PILER-CR
	TAAAATGCCTGTCCGCCTGGCTCATTTGCG
CGGTTTATCCCCGCTGGCGCGGGGAACACAG	CGACGACGCCGTCATCACCGGTGACTGTGA
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	ATTCAGGCATTTAAAACTGCGCAATTATTT
CGGTTTATCCCCGCTGGCGCGGGGAACACAT	ATCTTCAATAAGGTTGAGTTGATACTCACT
CGGTTTATCCCCGCTGGCGCGGGGAACACGTTACCAGAACCAAGCACGCTGTTACCTGTCCCGGTTTATCCCCGCTGGCGCGGGGAACACAACGCGTGCGTTGCCACCCCCTCACGGATCATCGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCATTTTTACCGGGTGGATTTCATAAATCGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCAGCGCAGGCCGCTTTATTTAGCAATTCAGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GACACTCCCAGATATTCACGCTGGGGGATCTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGGTAGTTCGCCGACAGATTGCGGACAGTGGT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AAATAACCTCTGACATTGTGGGGAAAGGTGAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCTATGGAGGCATGGAACGCCTGCCGCACCGC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGGGGATATCCCCCAGTTGAGCTACTCGGAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GATATCAGCCGAGAAACGCTCAATTGCGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACCAACGTCAGATGACGCGAAACCTGAAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGTCAATCCACGCGAATATGATCGCCTGACC
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007530.1\|WP_001145535.1\|2657106_2658060_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP007530.1\|WP_000206423.1\|2650810_2651869_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP007530.1\|WP_001208018.1\|2663354_2664152_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP007530.1\|WP_000226841.1\|2671924_2674159_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP007530.1\|WP_000107113.1\|2679583_2680924_-\|glucarate-dehydratase	unknown	unknown	gnl\|CDD\|211799
NZ_CP007530.1\|WP_000108312.1\|2662904_2663267_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP007530.1\|WP_000085108.1\|2650053_2650800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP007530.1\|WP_000368577.1\|2652427_2653987_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP007530.1\|WP_000706486.1\|2678363_2679506_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP007530.1\|WP_000210918.1\|2660669_2662469_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP007530.1\|WP_000046857.1\|2674210_2675506_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP007530.1\|WP_000210863.1\|2667800_2669438_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP007530.1\|WP_000029524.1\|2651882_2652431_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP007530.1\|WP_000186399.1\|2675563_2678320_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP007530.1\|WP_001290667.1\|2658957_2660670_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP007530.1\|WP_001199958.1\|2665612_2666284_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP007530.1\|WP_072105920.1\|2671483_2671840_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP007530.1\|WP_000036734.1\|2666419_2667718_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP007530.1\|WP_000080401.1\|2658147_2658882_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP007530.1\|WP_000210897.1\|2669665_2670466_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569

Protein	Function_ID	Function_description	E-value
NZ_CP007530.1\|WP_001145535.1\|2657106_2658060_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP007530.1\|WP_000206423.1\|2650810_2651869_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.89551e-135
NZ_CP007530.1\|WP_001208018.1\|2663354_2664152_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	4.02249e-102
NZ_CP007530.1\|WP_000226841.1\|2671924_2674159_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP007530.1\|WP_000107113.1\|2679583_2680924_-\|glucarate-dehydratase	gnl\|CDD\|211799	TIGR03247, glucar-dehydr, glucarate dehydratase. Glucarate dehydratase converts D-glucarate (and L-idarate, a stereoisomer) to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0716). The E. coli enzyme has been well-characterized.	0
NZ_CP007530.1\|WP_000108312.1\|2662904_2663267_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.66978e-58
NZ_CP007530.1\|WP_000085108.1\|2650053_2650800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.18709e-48
NZ_CP007530.1\|WP_000368577.1\|2652427_2653987_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	2.04216e-172
NZ_CP007530.1\|WP_000706486.1\|2678363_2679506_-\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP007530.1\|WP_000210918.1\|2660669_2662469_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP007530.1\|WP_000046857.1\|2674210_2675506_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP007530.1\|WP_000210863.1\|2667800_2669438_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP007530.1\|WP_000029524.1\|2651882_2652431_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.97309e-33
NZ_CP007530.1\|WP_000186399.1\|2675563_2678320_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP007530.1\|WP_001290667.1\|2658957_2660670_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP007530.1\|WP_001199958.1\|2665612_2666284_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.75351e-154
NZ_CP007530.1\|WP_072105920.1\|2671483_2671840_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.40983e-20
NZ_CP007530.1\|WP_000036734.1\|2666419_2667718_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP007530.1\|WP_000080401.1\|2658147_2658882_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.84911e-136
NZ_CP007530.1\|WP_000210897.1\|2669665_2670466_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.58847e-158

>NZ_CP007530.1|WP_001208018.1|2663354_2664152_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGVGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSAKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPLTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP007530.1|WP_000108312.1|2662904_2663267_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE
>NZ_CP007530.1|WP_000210918.1|2660669_2662469_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKRLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQAGKDFDNKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLAVNQKITGRDSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKEIVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQQYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP007530.1|WP_001290667.1|2658957_2660670_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTTYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITESDILASLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP007530.1|WP_000080401.1|2658147_2658882_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETSAQLETLTAEERVVWALKNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDIHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP007530.1|WP_001145535.1|2657106_2658060_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKLDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP007530.1|WP_000368577.1|2652427_2653987_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNGDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRGALKEAWFANAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP007530.1|WP_000029524.1|2651882_2652431_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKAAWHVTALAITAVLAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP007530.1|WP_000206423.1|2650810_2651869_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILVESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEAVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP007530.1|WP_000085108.1|2650053_2650800_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGRAPDALREAYRQYQDKFNALRLPLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLSKEDACISQE
>NZ_CP007530.1|WP_001199958.1|2665612_2666284_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVCCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP007530.1|WP_000036734.1|2666419_2667718_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP007530.1|WP_000210863.1|2667800_2669438_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP007530.1|WP_000210897.1|2669665_2670466_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNYQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP007530.1|WP_072105920.1|2671483_2671840_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAGSRLLALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP007530.1|WP_000226841.1|2671924_2674159_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP007530.1|WP_000046857.1|2674210_2675506_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPRLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP007530.1|WP_000186399.1|2675563_2678320_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP007530.1|WP_000706486.1|2678363_2679506_-|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIVQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP007530.1|WP_000107113.1|2679583_2680924_-|glucarate-dehydratase
MSTQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTAVRNQFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGNRKATPLPYQSQPDEQCDWYRLRHEEAMTPETVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAESIVALAKRFPQARVTLDPNGAWSLNEAISIGKYLKGSLAYAEDPCGAEQGFSGREVMAEFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGLTWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGMVQVPTKPGLGVELDMDQVMKAHELYQKHGLGARDDAMGMQYLIPGWTFDNKRPCMVR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP007530_1	1.24\|2648055\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2648055-2648086	32	NZ_CP007530.1	368624-368655	1	0.969

1. spacer 1.24|2648055|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to position: 368624-368655, mismatch: 1, identity: 0.969

ctgttcgccaggctttccgctcacaccgcgac	CRISPR spacer
ctgttcgccagcctttccgctcacaccgcgac	Protospacer
*********** ********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007530_1	1.14\|2647445\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647445-2647476	32	NZ_LN890526	Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence	41461-41492	0	1.0
NZ_CP007530_2	2.7\|2664645\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664645-2664676	32	NZ_CP048637	Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence	18568-18599	5	0.844
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	NC_028696	Salmonella phage SEN22, complete genome	23090-23121	5	0.844
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	MN693691	Marine virus AFVG_250M1053, complete genome	22278-22307	6	0.8
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	73912-73941	6	0.8
NZ_CP007530_2	2.21\|2664525\|30\|NZ_CP007530\|PILER-CR	2664525-2664554	30	NZ_CP043769	Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid unnamed2, complete sequence	1966-1995	6	0.8
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	173164-173195	7	0.781
NZ_CP007530_1	1.17\|2647628\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647628-2647659	32	KJ803031	Dinoroseobacter phage vBDshPR2C, complete genome	12107-12138	7	0.781
NZ_CP007530_1	1.18\|2647689\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647689-2647720	32	MK416008	Klebsiella phage ST405-OXA48phi1.3, complete genome	8038-8069	7	0.781
NZ_CP007530_1	1.20\|2647811\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647811-2647842	32	MK448714	Streptococcus phage Javan241, complete genome	7328-7359	7	0.781
NZ_CP007530_2	2.5\|2664523\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664523-2664554	32	NZ_CP043769	Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid unnamed2, complete sequence	1964-1995	7	0.781
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32766-32797	7	0.781
NZ_CP007530_2	2.17\|2665256\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665256-2665287	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	46194-46225	7	0.781
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	15179-15208	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	MK972713	Salmonella phage SW5, complete genome	11646-11675	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	MK972714	Salmonella phage SW3, complete genome	11868-11897	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NC_049460	Salmonella phage SI7, complete genome	2088-2117	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1384434-1384463	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	215886-215915	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	372347-372376	7	0.767
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	155190-155219	7	0.767
NZ_CP007530_2	2.20\|2664464\|30\|NZ_CP007530\|PILER-CR	2664464-2664493	30	MH622937	Myoviridae sp. isolate ctcg_2, complete genome	4729-4758	7	0.767
NZ_CP007530_2	2.20\|2664464\|30\|NZ_CP007530\|PILER-CR	2664464-2664493	30	MT254578	Bacillus phage Izhevsk, complete genome	123536-123565	7	0.767
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_KX426227	Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.1, complete sequence	232381-232412	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	CP033569	Acinetobacter pittii strain 2014N21-145 plasmid p2014N21-145-1, complete sequence	60436-60467	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP033130	Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence	160354-160385	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	CP033531	Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-1, complete sequence	215228-215259	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP042557	Acinetobacter baumannii strain E47 plasmid pE47_001, complete sequence	291417-291448	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP010351	Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence	55844-55875	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP029396	Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence	203946-203977	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP048828	Acinetobacter baumannii strain ABF9692 plasmid pABF9692, complete sequence	69295-69326	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP032285	Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence	31684-31715	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP042365	Acinetobacter pittii strain C54 plasmid pC54_001, complete sequence	218063-218094	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_MK134375	Acinetobacter baumannii strain 34AB plasmid p34AB, complete sequence	186944-186975	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP038010	Acinetobacter haemolyticus strain TJR01 plasmid pAHTJR1, complete sequence	26068-26099	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP043053	Acinetobacter pittii strain AP43 plasmid pAP43-OXA58-NDM1, complete sequence	231073-231104	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_MH220285	Acinetobacter ursingii strain RIVM0002 plasmid pRIVM0002_IMP-4_171109_B03, complete sequence	142294-142325	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_MH220287	Acinetobacter ursingii strain RIVM0061 plasmid pRIVM0061_IMP-4_171109_B01, complete sequence	149531-149562	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_CP043309	Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence	101601-101632	8	0.75
NZ_CP007530_1	1.3\|2646774\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2646774-2646805	32	NZ_MH220286	Acinetobacter ursingii strain RIVM0051 plasmid pRIVM0051_IMP-4, complete sequence	114096-114127	8	0.75
NZ_CP007530_1	1.9\|2647140\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647140-2647171	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	535727-535758	8	0.75
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	KM659097	Paracoccus yeei plasmid pLM20P5, complete sequence	11561-11592	8	0.75
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	MH834622	Arthrobacter phage Noely, complete genome	3314-3345	8	0.75
NZ_CP007530_1	1.22\|2647933\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647933-2647964	32	MH572490	Microviridae sp. isolate SD_HC_1, complete genome	89-120	8	0.75
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	372347-372378	8	0.75
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	73912-73943	8	0.75
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_CP013739	Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence	155188-155219	8	0.75
NZ_CP007530_2	2.4\|2664462\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664462-2664493	32	MT254578	Bacillus phage Izhevsk, complete genome	123536-123567	8	0.75
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	140243-140274	8	0.75
NZ_CP007530_2	2.16\|2665195\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665195-2665226	32	AP013464	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S31-C32	33805-33836	8	0.75
NZ_CP007530_2	2.16\|2665195\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665195-2665226	32	AP013465	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S32-C58	16862-16893	8	0.75
NZ_CP007530_2	2.18\|2664342\|30\|NZ_CP007530\|PILER-CR	2664342-2664371	30	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	14060-14089	8	0.733
NZ_CP007530_2	2.19\|2664403\|30\|NZ_CP007530\|PILER-CR	2664403-2664432	30	MK937598	Microbacterium phage Celaena, complete genome	28658-28687	8	0.733
NZ_CP007530_2	2.20\|2664464\|30\|NZ_CP007530\|PILER-CR	2664464-2664493	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	131245-131274	8	0.733
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	AP013386	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51	33360-33391	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	GU943014	Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence	17166-17197	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	AP014420	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, * SEQUENCING IN PROGRESS *, 5 ordered pieces	1557-1588	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	GU943017	Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence	8838-8869	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	AP014417	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, * SEQUENCING IN PROGRESS *, 5 ordered pieces	32062-32093	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	GU943022	Uncultured phage MedDCM-OCT-S04-C890 genomic sequence	8801-8832	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	GU943013	Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence	10849-10880	9	0.719
NZ_CP007530_1	1.8\|2647079\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647079-2647110	32	AP014416	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, * SEQUENCING IN PROGRESS *, 4 ordered pieces	9243-9274	9	0.719
NZ_CP007530_1	1.10\|2647201\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647201-2647232	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	670891-670922	9	0.719
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	MF919512	Mycobacterium phage Klein, complete genome	101112-101143	9	0.719
NZ_CP007530_1	1.18\|2647689\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647689-2647720	32	MG893203	Vibrio phage VP06, complete genome	26226-26257	9	0.719
NZ_CP007530_1	1.20\|2647811\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647811-2647842	32	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	502920-502951	9	0.719
NZ_CP007530_1	1.24\|2648055\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2648055-2648086	32	NC_019789	Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence	256652-256683	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1384432-1384463	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	215884-215915	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	15179-15210	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	MK972713	Salmonella phage SW5, complete genome	11646-11677	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	MK972714	Salmonella phage SW3, complete genome	11868-11899	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	NC_049460	Salmonella phage SI7, complete genome	2088-2119	9	0.719
NZ_CP007530_2	2.3\|2664401\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664401-2664432	32	MK937598	Microbacterium phage Celaena, complete genome	28656-28687	9	0.719
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	NZ_CP010421	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence	253119-253150	9	0.719
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	NZ_MG825385	Escherichia coli strain 1107 plasmid p1107-111K, complete sequence	83426-83457	9	0.719
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	111697-111728	10	0.688
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	MN908686	Microbacterium phage Zepp, complete genome	30030-30061	10	0.688
NZ_CP007530_1	1.11\|2647262\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647262-2647293	32	MT889377	Microbacterium phage Zayuliv, complete genome	30596-30627	10	0.688
NZ_CP007530_1	1.20\|2647811\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2647811-2647842	32	NC_018493	Bacillus cereus FRI-35 plasmid p02, complete sequence	11521-11552	10	0.688
NZ_CP007530_2	2.2\|2664340\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664340-2664371	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	14058-14089	10	0.688
NZ_CP007530_2	2.4\|2664462\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664462-2664493	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	131245-131276	10	0.688
NZ_CP007530_2	2.7\|2664645\|32\|NZ_CP007530\|CRISPRCasFinder,CRT	2664645-2664676	32	MT024867	Arthrobacter phage BlueFeather, complete genome	10238-10269	10	0.688
NZ_CP007530_2	2.13\|2665012\|32\|NZ_CP007530\|CRISPRCasFinder,CRT,PILER-CR	2665012-2665043	32	NZ_CP010421	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence	242206-242237	10	0.688

1. spacer 1.14|2647445|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

gaaagaattggaatttgccattacgcagagtg	CRISPR spacer
gaaagaattggaatttgccattacgcagagtg	Protospacer
********************************

2. spacer 2.7|2664645|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP048637 (Rhizobium oryzihabitans strain M15 plasmid p5, complete sequence) position: , mismatch: 5, identity: 0.844

aacgcgtgcgttgccaccccctcacggatcat	CRISPR spacer
caggctggcgttgcctccccctcacggatcat	Protospacer
 * **  ******** ****************

3. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NC_028696 (Salmonella phage SEN22, complete genome) position: , mismatch: 5, identity: 0.844

gctatggaggcatggaacgcctgccgcaccgc	CRISPR spacer
tttgtggagggttggaacgcctgccgcaccgc	Protospacer
 .*.******  ********************

4. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to MN693691 (Marine virus AFVG_250M1053, complete genome) position: , mismatch: 6, identity: 0.8

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
aggctacgccgtcatcaccgatgactgggg	Protospacer
 *.* ***************.****** *.

5. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 6, identity: 0.8

cgacgacgccgtcatcaccggtgactgtga-	CRISPR spacer
cgacgacgccgtcatcgcaggtgg-agtgcc	Protospacer
****************.* ****.  ***

6. spacer 2.21|2664525|30|NZ_CP007530|PILER-CR matches to NZ_CP043769 (Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

atcttcaataaggttgagttgatactcact	CRISPR spacer
ttcttcaataagtttgtgttgataattatt	Protospacer
 *********** *** ******* *.*.*

7. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
ttcgcattcaccgtcacggcctgggcggggtc	Protospacer
***   **************** *** ***

8. spacer 1.17|2647628|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to KJ803031 (Dinoroseobacter phage vBDshPR2C, complete genome) position: , mismatch: 7, identity: 0.781

--ctggccataattgactgatatcgagctttggt	CRISPR spacer
gttcagcc--aattgcccgatatcgagctttggt	Protospacer
  ...***  ***** *.****************

9. spacer 1.18|2647689|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MK416008 (Klebsiella phage ST405-OXA48phi1.3, complete genome) position: , mismatch: 7, identity: 0.781

tttaaagagctggctgctgatgtggatcggat--	CRISPR spacer
cgcaaagagctggctgctgatccgga--ggatga	Protospacer
. .****************** .***  ****

10. spacer 1.20|2647811|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MK448714 (Streptococcus phage Javan241, complete genome) position: , mismatch: 7, identity: 0.781

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
gaacgtgaagcggattttattaatgttgttat	Protospacer
* .* *.** *** **************** *

11. spacer 2.5|2664523|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP043769 (Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

atatcttcaataaggttgagttgatactcact	CRISPR spacer
agttcttcaataagtttgtgttgataattatt	Protospacer
*  *********** *** ******* *.*.*

12. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 7, identity: 0.781

gctatgga-ggcatggaacgcctgccgcaccgc	CRISPR spacer
-ttttgtatcgcctggaacgcctgccgcgccgc	Protospacer
 .* ** *  ** ***************.****

13. spacer 2.17|2665256|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 7, identity: 0.781

tcgtc--aatccacgcgaatatgatcgcctgacc	CRISPR spacer
--gtcgaaatcgacgcgaatgtgatcgccttgcg	Protospacer
  ***  **** ********.********* .*

14. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgacgccgccgtcatcaccggcgagcgaac	Protospacer
***** ***************.** .* .

15. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgaagacgccgtcattaccggtgataacca	Protospacer
*** ***********.********. .. *

16. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgaagacgccgtcattaccggtgataacca	Protospacer
*** ***********.********. .. *

17. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgaagacgccgtcattaccggtgataacca	Protospacer
*** ***********.********. .. *

18. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgacgagaccgtcatcaccggtgagaacgc	Protospacer
****** .****************  ..*

19. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cgacgaggcggtcatcaccggtgagggccg	Protospacer
****** ** **************  *. .

20. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cggcgtcgccgtcatcaccggtgcgggcgc	Protospacer
**.** *****************   *.*

21. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 7, identity: 0.767

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
caacgacgccgtgatcaacggtgacacggc	Protospacer
*.********** **** *******   *

22. spacer 2.20|2664464|30|NZ_CP007530|PILER-CR matches to MH622937 (Myoviridae sp. isolate ctcg_2, complete genome) position: , mismatch: 7, identity: 0.767

attcaggcatttaaaactgcgcaattattt	CRISPR spacer
gtccggcgatttaaatctgcgcaattattg	Protospacer
.*.*.*  ******* *************

23. spacer 2.20|2664464|30|NZ_CP007530|PILER-CR matches to MT254578 (Bacillus phage Izhevsk, complete genome) position: , mismatch: 7, identity: 0.767

attcaggcatttaaaactgcgcaattattt	CRISPR spacer
ttagaagcacttaaaactgctcaattatta	Protospacer
 *  *.***.********** ********

24. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX426227 (Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

25. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to CP033569 (Acinetobacter pittii strain 2014N21-145 plasmid p2014N21-145-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

26. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033130 (Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

27. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to CP033531 (Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

28. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042557 (Acinetobacter baumannii strain E47 plasmid pE47_001, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

29. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010351 (Acinetobacter johnsonii XBB1 plasmid pXBB1-9, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

30. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029396 (Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

31. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048828 (Acinetobacter baumannii strain ABF9692 plasmid pABF9692, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

32. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032285 (Acinetobacter sp. WCHA55 plasmid pOXA58_010055, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

33. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042365 (Acinetobacter pittii strain C54 plasmid pC54_001, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

34. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK134375 (Acinetobacter baumannii strain 34AB plasmid p34AB, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

35. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038010 (Acinetobacter haemolyticus strain TJR01 plasmid pAHTJR1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

36. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043053 (Acinetobacter pittii strain AP43 plasmid pAP43-OXA58-NDM1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

37. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH220285 (Acinetobacter ursingii strain RIVM0002 plasmid pRIVM0002_IMP-4_171109_B03, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

38. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH220287 (Acinetobacter ursingii strain RIVM0061 plasmid pRIVM0061_IMP-4_171109_B01, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

39. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043309 (Acinetobacter johnsonii strain Acsw19 plasmid pAcsw19-2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

40. spacer 1.3|2646774|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH220286 (Acinetobacter ursingii strain RIVM0051 plasmid pRIVM0051_IMP-4, complete sequence) position: , mismatch: 8, identity: 0.75

ttcctgaattcttcagatcaactaaataattc	CRISPR spacer
ttcgtgaattcttcagatgaactcattcgtat	Protospacer
*** ************** **** * * .* .

41. spacer 1.9|2647140|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

tggtcgtgaccagcgggcgccg-ctgtgaggcc	CRISPR spacer
tggtcgaggccagcgggcgccgcctgctcaac-	Protospacer
****** *.************* ***.  ..*

42. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to KM659097 (Paracoccus yeei plasmid pLM20P5, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
gtccgcagcaccgtcccgccctcggccgggac	Protospacer
 **.*.  ******* ** ************

43. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MH834622 (Arthrobacter phage Noely, complete genome) position: , mismatch: 8, identity: 0.75

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
ttgggcgtcaccgtcacggccccgtccggggc	Protospacer
**  *. **************.** *****.

44. spacer 1.22|2647933|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MH572490 (Microviridae sp. isolate SD_HC_1, complete genome) position: , mismatch: 8, identity: 0.75

atttcccccaacatccattgggcgctacctac	CRISPR spacer
gattgccccaacattcattgggcgcatcatgc	Protospacer
. ** *********.**********  * *.*

45. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 8, identity: 0.75

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ggcggcgtcgccgtcatcaccggtgcgggcgc	Protospacer
.***.** *****************   *.*

46. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 8, identity: 0.75

agcgacgacgccgtcatcaccggtgactgtga-	CRISPR spacer
gacgacgacgccgtcatcgcaggtgg-agtgcc	Protospacer
..****************.* ****.  ***

47. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP013739 (Streptomyces globisporus C-1027 plasmid SGLP1, complete sequence) position: , mismatch: 8, identity: 0.75

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
aacaacgacgccgtgatcaacggtgacacggc	Protospacer
*.*.********** **** *******   *

48. spacer 2.4|2664462|32|NZ_CP007530|CRISPRCasFinder,CRT matches to MT254578 (Bacillus phage Izhevsk, complete genome) position: , mismatch: 8, identity: 0.75

atattcaggcatttaaaactgcgcaattattt	CRISPR spacer
acttagaagcacttaaaactgctcaattatta	Protospacer
*. *  *.***.********** ********

49. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gctatggaggcatggaacgcctgccgcaccgc	CRISPR spacer
gtcctggatgcctggaacgcctgccgcgactc	Protospacer
*.. **** ** ***************. * *

50. spacer 2.16|2665195|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP013464 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S31-C32) position: , mismatch: 8, identity: 0.75

attaccaacgtcagatgacgcgaaacctgaac	CRISPR spacer
atcgagcgcgtcagatgacgcaaaaccagaac	Protospacer
**..   .*************.***** ****

51. spacer 2.16|2665195|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP013465 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C51-MedDCM-OCT-S32-C58) position: , mismatch: 8, identity: 0.75

attaccaacgtcagatgacgcgaaacctgaac	CRISPR spacer
atcgagcgcgtcagatgacgcaaaaccagaac	Protospacer
**..   .*************.***** ****

52. spacer 2.18|2664342|30|NZ_CP007530|PILER-CR matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 8, identity: 0.733

taaaatgcctgtccgcctggctcatttgcg	CRISPR spacer
gcaccgacctgtccgcctggctctttggcg	Protospacer
  *   .**************** ** ***

53. spacer 2.19|2664403|30|NZ_CP007530|PILER-CR matches to MK937598 (Microbacterium phage Celaena, complete genome) position: , mismatch: 8, identity: 0.733

cgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
gcgcacggccgtcatcgccggtgacggtga	Protospacer
  .*.  *********.******** ****

54. spacer 2.20|2664464|30|NZ_CP007530|PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

attcaggcatttaaaactgcgcaattattt	CRISPR spacer
gcttgcacatttaatactgcgcacttattt	Protospacer
..*.. .******* ******** ******

55. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

56. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to GU943014 (Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

57. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

58. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to GU943017 (Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

59. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

60. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to GU943022 (Uncultured phage MedDCM-OCT-S04-C890 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

61. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to GU943013 (Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

62. spacer 1.8|2647079|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to AP014416 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*

63. spacer 1.10|2647201|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccacatgcgacgcctcttttttctgtac	CRISPR spacer
atcgccacatgccacgcatctttgcgccgaca	Protospacer
************ **** ***** . *.*

64. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MF919512 (Mycobacterium phage Klein, complete genome) position: , mismatch: 9, identity: 0.719

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
atatcacccaccgtcacgtcatcggccgggat	Protospacer
 * *  ..********** * **********

65. spacer 1.18|2647689|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MG893203 (Vibrio phage VP06, complete genome) position: , mismatch: 9, identity: 0.719

tttaaagagctggctgctgatgtggatcggat	CRISPR spacer
tttaaagagctggctgcgggtgtagctgcttc	Protospacer
***************** *.***.* *    .

66. spacer 1.20|2647811|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
ccttttaaacctgtttttaataatgtttcata	Protospacer
 * .******* ******* ******* . *

67. spacer 1.24|2648055|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NC_019789 (Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence) position: , mismatch: 9, identity: 0.719

ctgttcgccaggctttccgctcacaccgcgac	CRISPR spacer
caaagcgccaggcttgccgctcacgccgccgt	Protospacer
* .  ********** ********.**** ..

68. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ctcgacgagaccgtcatcaccggtgagaacgc	Protospacer
  ****** .****************  ..*

69. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
cacgacgaggcggtcatcaccggtgagggccg	Protospacer
 .****** ** **************  *. .

70. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ctcgacgccgccgtcatcaccggcgagcgaac	Protospacer
  ***** ***************.** .* .

71. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to MK972713 (Salmonella phage SW5, complete genome) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ttcgaagacgccgtcattaccggtgataacca	Protospacer
  *** ***********.********. .. *

72. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to MK972714 (Salmonella phage SW3, complete genome) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ttcgaagacgccgtcattaccggtgataacca	Protospacer
  *** ***********.********. .. *

73. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NC_049460 (Salmonella phage SI7, complete genome) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
ttcgaagacgccgtcattaccggtgataacca	Protospacer
  *** ***********.********. .. *

74. spacer 2.3|2664401|32|NZ_CP007530|CRISPRCasFinder,CRT matches to MK937598 (Microbacterium phage Celaena, complete genome) position: , mismatch: 9, identity: 0.719

agcgacgacgccgtcatcaccggtgactgtga	CRISPR spacer
gggcgcacggccgtcatcgccggtgacggtga	Protospacer
.*  .*.  *********.******** ****

75. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 9, identity: 0.719

gctatggaggcatggaacgcctgccgcaccgc	CRISPR spacer
cagctggaggcctggaacgcctgccgccagac	Protospacer
    ******* ***************   .*

76. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG825385 (Escherichia coli strain 1107 plasmid p1107-111K, complete sequence) position: , mismatch: 9, identity: 0.719

gctatggaggcatggaacgcctgccgcaccgc	CRISPR spacer
aactggagagcatggaacgcctgccgcgccgc	Protospacer
. .  *...******************.****

77. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgccgatctccgccacggcctcggccgggct	Protospacer
*. .   ** ***.****************

78. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MN908686 (Microbacterium phage Zepp, complete genome) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgatcaccaccggcacgtcctcggccgggat	Protospacer
*.   . .***** **** ************

79. spacer 1.11|2647262|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to MT889377 (Microbacterium phage Zayuliv, complete genome) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgatcaccaccggcacgtcctcggccgggat	Protospacer
*.   . .***** **** ************

80. spacer 1.20|2647811|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NC_018493 (Bacillus cereus FRI-35 plasmid p02, complete sequence) position: , mismatch: 10, identity: 0.688

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
taataagaactggtttttattaatgttgttac	Protospacer
  ..  .***.******************* .

81. spacer 2.2|2664340|32|NZ_CP007530|CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 10, identity: 0.688

attaaaatgcctgtccgcctggctcatttgcg	CRISPR spacer
gcgcaccgacctgtccgcctggctctttggcg	Protospacer
..  *   .**************** ** ***

82. spacer 2.4|2664462|32|NZ_CP007530|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 10, identity: 0.688

atattcaggcatttaaaactgcgcaattattt	CRISPR spacer
tggcttgcacatttaatactgcgcacttattt	Protospacer
  ..*.. .******* ******** ******

83. spacer 2.7|2664645|32|NZ_CP007530|CRISPRCasFinder,CRT matches to MT024867 (Arthrobacter phage BlueFeather, complete genome) position: , mismatch: 10, identity: 0.688

aacgcgtgcgttgccaccccctcacggatcat	CRISPR spacer
ggtccgtgagtttccaccccctcacgggccgg	Protospacer
... **** *** **************..*.

84. spacer 2.13|2665012|32|NZ_CP007530|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 10, identity: 0.688

gctatggaggcatggaacgcctgccgcaccgc	CRISPR spacer
caactggaggcctggaacgtctgccgccagtc	Protospacer
    ******* *******.*******    *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

896165 : 900585

Escherichia_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000275698.1\|896165_896579_+	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	5.5e-19	37.7
WP_000733298.1\|896595_897324_+	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.2e-61	52.5
WP_000158844.1\|897516_898059_+	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	8.1e-71	66.5
WP_001277616.1\|898206_898584_-	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
WP_001529135.1\|898656_899466_-	cytolethal distending toxin S-CDT	A5LH53	Enterobacteria_phage	2.1e-62	50.0
WP_001036547.1\|899963_900128_+	hypothetical protein	NA	NA	NA	NA
WP_000497452.1\|900345_900585_-	virulence protein MsgA	K7P6H1	Enterobacteria_phage	2.5e-32	87.3

DBSCAN-SWA_2

1698779 : 1706046

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157316.1\|1698779_1700210_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.8e-105	57.4
WP_000377052.1\|1700283_1700979_-	phosphohydrolase	S4W232	Pandoravirus	1.6e-07	28.0
WP_000107430.1\|1701070_1701370_-	membrane protein	NA	NA	NA	NA
WP_001080686.1\|1702019_1703231_+	porin OmpC	Q1MVN1	Enterobacteria_phage	2.6e-109	56.2
WP_024133707.1\|1703489_1703678_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|1703688_1703901_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_000457654.1\|1704355_1705624_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.9e-227	92.2
WP_000394197.1\|1705626_1706046_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5

DBSCAN-SWA_3

1863221 : 1872395

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195336.1\|1863221_1865255_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703136.1\|1865495_1865954_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	7.6e-54	73.2
WP_001221797.1\|1866125_1866656_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|1866712_1867180_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|1867226_1867946_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272849.1\|1867942_1869628_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.4e-277	90.9
WP_001240418.1\|1869853_1870585_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|1870644_1870752_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|1870732_1871464_-	ABC transporter permease	NA	NA	NA	NA
WP_000569166.1\|1871447_1872395_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8

DBSCAN-SWA_4

2071974 : 2150637

105

Salmonella_phage(62.67%)

holin,terminase,integrase,protease,tail,lysis,tRNA

attL 2096375:2096390|attR 2130650:2130665

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000016631.1\|2071974_2072787_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_001289142.1\|2072786_2073800_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000699176.1\|2073867_2075004_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	3.8e-22	29.1
WP_000553395.1\|2075107_2076109_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_000127720.1\|2076105_2077284_-	MFS transporter	NA	NA	NA	NA
WP_001051266.1\|2077463_2077838_-	hypothetical protein	NA	NA	NA	NA
WP_000433432.1\|2078010_2078193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000846417.1\|2078404_2078923_+	YbjP/YqhG family protein	NA	NA	NA	NA
WP_001142914.1\|2078989_2079646_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000817159.1\|2079743_2080958_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_000816076.1\|2081117_2083118_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_000559749.1\|2083169_2083445_-	YfcL family protein	NA	NA	NA	NA
WP_001066345.1\|2083477_2084026_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_000368599.1\|2084025_2084835_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_000750428.1\|2084834_2085659_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_000918457.1\|2085662_2086748_-	chorismate synthase	A0A291AU41	Pandoravirus	9.1e-90	47.8
WP_001542449.1\|2086783_2087716_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000730794.1\|2087881_2088433_+	endonuclease SmrB	NA	NA	NA	NA
WP_001195800.1\|2088532_2089018_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_000214151.1\|2089226_2091374_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_001248130.1\|2091373_2092684_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_000030904.1\|2092861_2093146_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_001518618.1\|2093516_2094824_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_000776787.1\|2094884_2095640_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_000377765.1\|2095928_2096870_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.1e-147	88.2
2096375:2096390	attL	NA	NA	NA	NA
WP_000958643.1\|2097183_2098353_+\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	2.7e-228	99.2
WP_001272647.1\|2098424_2099723_-	hypothetical protein	I6R0Q9	Salmonella_phage	4.5e-245	99.5
WP_001113927.1\|2099733_2100693_-	hypothetical protein	H6WRW5	Salmonella_phage	1.4e-182	99.4
WP_000094331.1\|2100701_2103881_-\|tail	phage tail protein	A0A1V0E5M1	Salmonella_phage	0.0e+00	96.0
WP_000904513.1\|2103890_2104418_-\|tail	tail assembly protein	I6RSM0	Salmonella_phage	6.4e-65	93.8
WP_001156982.1\|2104360_2105080_-	C40 family peptidase	I6S1R8	Salmonella_phage	7.3e-136	92.1
WP_001204737.1\|2105079_2105784_-\|tail	phage minor tail protein L	A0A1V0E5N2	Salmonella_phage	1.6e-135	98.7
WP_000593667.1\|2105826_2106114_-	hypothetical protein	NA	NA	NA	NA
WP_001115296.1\|2106110_2106458_-\|tail	phage tail protein	A0A1V0E5N3	Salmonella_phage	2.2e-61	97.4
WP_001240563.1\|2106514_2106736_-	hypothetical protein	NA	NA	NA	NA
WP_000829987.1\|2106763_2109958_-	tape measure protein	Q5G8W8	Enterobacteria_phage	1.1e-255	58.1
WP_000755142.1\|2110026_2110671_-	hypothetical protein	NA	NA	NA	NA
WP_000534978.1\|2110776_2111751_-	phage antirepressor Ant	I6S627	Salmonella_phage	3.8e-188	99.7
WP_000543813.1\|2111743_2111914_-	Arc family DNA-binding protein	I6R9A8	Salmonella_phage	5.7e-23	100.0
WP_000033148.1\|2112029_2112407_+	Arc family DNA-binding protein	I6RSL2	Salmonella_phage	1.3e-64	100.0
WP_000065273.1\|2112448_2113177_-	KilA-N domain-containing protein	I6S1R0	Salmonella_phage	3.4e-141	98.8
WP_000644473.1\|2113398_2114052_-	hypothetical protein	I6R0Q2	Salmonella_phage	3.3e-119	98.2
WP_000742045.1\|2114097_2114835_-	immunoglobulin domain-containing protein	Q5G8X3	Enterobacteria_phage	2.3e-129	98.0
WP_000198520.1\|2114850_2115237_-	hypothetical protein	Q5G8X4	Enterobacteria_phage	3.8e-67	97.7
WP_001144356.1\|2115233_2115629_-	hypothetical protein	I6RSK8	Salmonella_phage	5.5e-69	99.2
WP_000117091.1\|2115636_2115999_-	hypothetical protein	I6S1Q5	Salmonella_phage	1.2e-67	99.2
WP_000633372.1\|2116170_2116572_-	hypothetical protein	I6S619	Salmonella_phage	7.8e-71	97.7
WP_001151798.1\|2116623_2116803_-	hypothetical protein	I6R9A3	Salmonella_phage	6.8e-27	100.0
WP_000273927.1\|2116812_2117889_-	hypothetical protein	I6RSK5	Salmonella_phage	9.0e-207	99.7
WP_000092740.1\|2117906_2118356_-	hypothetical protein	I6S1Q2	Salmonella_phage	9.6e-78	100.0
WP_001122569.1\|2118368_2119634_-	hypothetical protein	Q5G8Y2	Enterobacteria_phage	2.0e-229	97.1
WP_000256772.1\|2119636_2120563_-	hypothetical protein	Q5G8Y3	Enterobacteria_phage	2.2e-169	97.7
WP_000130169.1\|2120522_2121872_-	DUF1073 domain-containing protein	A0A1V0E5Q5	Salmonella_phage	9.1e-257	98.9
WP_000623181.1\|2122112_2122379_-	hypothetical protein	Q5G8Y6	Enterobacteria_phage	8.3e-45	100.0
WP_000445798.1\|2122440_2123760_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	4.6e-261	99.1
WP_000147264.1\|2123743_2124175_-\|terminase	terminase small subunit	A0A1V0E5Q4	Salmonella_phage	7.6e-72	100.0
WP_001028471.1\|2124639_2125161_-	KilA-N domain-containing protein	K7P7K9	Enterobacteria_phage	5.5e-93	98.8
WP_000971509.1\|2125379_2125841_-\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	4.5e-54	79.3
WP_001167369.1\|2125837_2126275_-	lysozyme	Q5G8R3	Enterobacteria_phage	2.6e-72	96.6
WP_000738703.1\|2126258_2126585_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
WP_000997682.1\|2126909_2127089_+	hypothetical protein	NA	NA	NA	NA
WP_001544602.1\|2127282_2127621_-	HNH endonuclease	A0A1W6DXT8	Salmonella_phage	1.1e-22	50.0
WP_001235465.1\|2128045_2128669_-	antitermination protein	C6ZR62	Salmonella_phage	1.5e-113	99.0
WP_000149882.1\|2128738_2128942_-	phage NinH family protein	I6RSQ6	Salmonella_phage	7.2e-33	100.0
WP_000861014.1\|2128938_2129334_-	RusA family crossover junction endodeoxyribonuclease	A0A220NQY4	Salmonella_phage	2.2e-70	96.9
WP_000002241.1\|2129330_2129621_-	DUF1364 domain-containing protein	A0A220NQY2	Salmonella_phage	1.7e-51	100.0
WP_001283993.1\|2129621_2129840_-	hypothetical protein	S4TUE0	Salmonella_phage	5.6e-23	68.1
WP_000950997.1\|2129832_2130009_-	protein ninF	I6S668	Salmonella_phage	3.1e-24	93.0
WP_000924597.1\|2130001_2130403_-	hypothetical protein	G9L690	Escherichia_phage	2.7e-63	85.0
WP_000113761.1\|2130405_2130582_-	NinE family protein	I6RSQ2	Salmonella_phage	2.3e-27	98.3
WP_000679702.1\|2130548_2130722_-	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
2130650:2130665	attR	NA	NA	NA	NA
WP_000815504.1\|2130718_2131165_-	recombination protein NinB	A0A1R3Y605	Salmonella_virus	2.3e-79	98.6
WP_001277266.1\|2131121_2131310_-	hypothetical protein	A0A1R3Y6Z7	Salmonella_virus	3.7e-23	90.3
WP_000344564.1\|2131312_2131579_-	hypothetical protein	Q716C8	Shigella_phage	3.1e-23	61.2
WP_000975822.1\|2131590_2131746_-	hypothetical protein	A0A2H4FWM4	Salmonella_phage	2.4e-20	100.0
WP_000248684.1\|2131757_2131964_-	hypothetical protein	I6RSI5	Salmonella_phage	5.3e-31	98.5
WP_001248379.1\|2132036_2133413_-	AAA family ATPase	Q76H51	Enterobacteria_phage	4.1e-252	98.9
WP_000067072.1\|2133409_2134243_-	replication protein	A0A1R3Y5R9	Salmonella_virus	2.3e-149	98.2
WP_001125981.1\|2134235_2134382_-	DUF2740 family protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_001103492.1\|2134416_2134698_-	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
WP_000067726.1\|2134808_2135024_-	helix-turn-helix transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
WP_000856894.1\|2135142_2135805_+	LexA family transcriptional regulator	A0A0M4QWY1	Salmonella_phage	1.7e-126	99.5
WP_000216174.1\|2136155_2136488_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	4.6e-53	96.4
WP_000695605.1\|2136495_2136741_+	hypothetical protein	U5PUY0	Salmonella_phage	2.5e-19	62.3
WP_001083248.1\|2136824_2137439_+	pentapeptide repeat-containing protein	A0A220NQW1	Salmonella_phage	3.2e-47	70.6
WP_000776962.1\|2137610_2137925_+	superinfection exclusion protein	E7C9Q4	Salmonella_phage	1.9e-56	100.0
WP_000141641.1\|2138009_2138168_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q76H38	Enterobacteria_phage	2.4e-23	100.0
WP_000156731.1\|2138148_2138337_+	DUF5444 family protein	I6S647	Salmonella_phage	3.7e-31	100.0
WP_000902089.1\|2138326_2138470_+	hypothetical protein	A0A1R3Y5R4	Salmonella_virus	1.6e-18	95.7
WP_001046983.1\|2138466_2139174_+	recombinase	I6R0N0	Salmonella_phage	5.2e-118	87.6
WP_001253476.1\|2139173_2139458_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_001111301.1\|2139504_2139798_+	DUF2856 family protein	E7C9P8	Salmonella_phage	2.1e-49	97.9
WP_001214770.1\|2139808_2139979_+	DUF2737 family protein	I6S642	Salmonella_phage	6.1e-25	100.0
WP_000665848.1\|2139975_2140557_+	hypothetical protein	A0A0N6WGF1	Salmonella_phage	2.8e-69	72.0
WP_000071069.1\|2140666_2141182_+	DUF262 domain-containing protein	Q8HAA5	Salmonella_phage	1.1e-96	98.8
WP_000065096.1\|2141178_2141847_+	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	3.1e-40	73.0
WP_000156434.1\|2142138_2143059_+	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	1.9e-80	82.9
WP_000002112.1\|2143051_2143336_+	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	7.0e-50	98.9
WP_000152199.1\|2143378_2144179_+	hypothetical protein	K7P7Q8	Enterobacteria_phage	4.1e-156	97.4
WP_001281207.1\|2144235_2144586_+	hypothetical protein	I6R980	Salmonella_phage	5.4e-60	99.1
WP_001208732.1\|2144682_2144886_+	hypothetical protein	C6ZR24	Salmonella_phage	2.7e-32	97.0
WP_000870313.1\|2146288_2147305_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_000276133.1\|2147315_2148122_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_000197765.1\|2149034_2149355_-	hypothetical protein	NA	NA	NA	NA
WP_000716005.1\|2149698_2150637_-\|protease	omptin family outer membrane protease PgtE	NA	NA	NA	NA

DBSCAN-SWA_5

2378570 : 2477634

Salmonella_phage(75.0%)

capsid,portal,terminase,integrase,tail,plate,lysis,tRNA,head

attL 2426435:2426451|attR 2486257:2486273

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000083343.1\|2378570_2379308_-\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000219174.1\|2379437_2380772_+	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_000365861.1\|2380789_2381689_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000188414.1\|2381791_2382379_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_000627811.1\|2382440_2382824_-	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000179978.1\|2383142_2383832_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000997366.1\|2383947_2384985_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001098732.1\|2385188_2385608_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
WP_000183647.1\|2385680_2386361_+\|tRNA	tRNA-uridine aminocarboxypropyltransferase	NA	NA	NA	NA
WP_000082660.1\|2386414_2389075_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_000949286.1\|2389189_2390545_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_001264480.1\|2390588_2390912_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_000807814.1\|2390908_2392210_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.4e-43	30.1
WP_000985653.1\|2392313_2392769_-	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
WP_001235092.1\|2398765_2401339_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
WP_000992639.1\|2401468_2402200_-	polyphenol oxidase	NA	NA	NA	NA
WP_000079130.1\|2402196_2403177_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_000197662.1\|2403308_2404046_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_000178449.1\|2404317_2404656_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_010989056.1\|2404759_2404807_+	pheA operon leader peptide PheL	NA	NA	NA	NA
WP_000200080.1\|2404906_2406067_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_000210991.1\|2406027_2406936_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_000225191.1\|2406993_2408115_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_001168062.1\|2408124_2409195_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
WP_001212379.1\|2409634_2410153_+	YfiR family protein	NA	NA	NA	NA
WP_001030990.1\|2410145_2411366_+	diguanylate cyclase DgcN	A0A2K8I9Y5	Pseudomonas_phage	1.7e-07	37.0
WP_000065257.1\|2411522_2411870_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000469807.1\|2411910_2412678_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_000043266.1\|2412722_2413271_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_000256453.1\|2413289_2413538_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_000460052.1\|2413790_2415152_-	signal recognition particle protein	NA	NA	NA	NA
WP_001537507.1\|2415317_2416109_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_127172650.1\|2416128_2417415_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_001287933.1\|2417535_2418141_+	hypothetical protein	NA	NA	NA	NA
WP_001518875.1\|2418175_2418766_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_001059155.1\|2418888_2419767_+	NAD(+) kinase	NA	NA	NA	NA
WP_000880965.1\|2419852_2421514_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001203445.1\|2421662_2422001_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_001112990.1\|2422162_2422453_-	RnfH family protein	NA	NA	NA	NA
WP_000242604.1\|2422442_2422919_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_001518569.1\|2423068_2423551_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
WP_001128839.1\|2424165_2435640_+	biofilm-associated protein BapA	NA	NA	NA	NA
2426435:2426451	attL	NA	NA	NA	NA
WP_000533852.1\|2435704_2437114_+	TolC family outer membrane protein	NA	NA	NA	NA
WP_000196155.1\|2437110_2439291_+	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	9.9e-19	34.0
WP_072101562.1\|2439298_2440462_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_000980499.1\|2441013_2441232_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	1.0e-37	98.6
WP_001102265.1\|2441300_2442401_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	3.5e-190	97.5
WP_000980409.1\|2442397_2442883_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	99.2
WP_001282761.1\|2442879_2445687_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	98.6
WP_000763317.1\|2445679_2445799_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.8e-15	97.4
WP_001280967.1\|2445813_2446116_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
WP_001207650.1\|2446170_2446686_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.3e-91	98.8
WP_000046109.1\|2446695_2447868_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	5.7e-223	99.7
WP_001165555.1\|2447970_2448528_-	serine-type DNA invertase Fin	A0A1S6L009	Salmonella_phage	7.2e-99	97.8
WP_001543331.1\|2448557_2449112_+	hypothetical protein	A0A1S6KZZ0	Salmonella_phage	1.7e-87	93.3
WP_000232919.1\|2449047_2449881_+	hypothetical protein	A0A1S6KZZ8	Salmonella_phage	1.3e-157	97.8
WP_000972187.1\|2449883_2450423_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	2.1e-95	97.8
WP_077905334.1\|2450426_2451044_-\|tail	tail fiber assembly protein	A0A1S6KZY8	Salmonella_phage	1.2e-110	97.9
WP_001086806.1\|2452331_2452937_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	8.3e-117	98.5
WP_000268330.1\|2452929_2453838_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.6e-159	99.7
WP_000177407.1\|2453824_2454184_-	GPW/gp25 family protein	E5G6N7	Salmonella_phage	1.8e-58	96.6
WP_000993748.1\|2454180_2454759_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.9e-108	99.0
WP_000829159.1\|2454827_2455274_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.4e-65	89.7
WP_001039959.1\|2455266_2455698_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.7e-71	93.7
WP_024133728.1\|2455793_2456222_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	5.6e-67	97.9
WP_000731037.1\|2456218_2456596_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.7e-59	96.8
WP_001069918.1\|2456600_2457110_-	lysozyme	A0A1S6KZY9	Salmonella_phage	1.1e-93	98.2
WP_000171565.1\|2457090_2457306_-	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_000868173.1\|2457309_2457513_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000673523.1\|2457512_2457977_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	6.4e-77	89.6
WP_000059177.1\|2458072_2458723_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	1.7e-112	97.2
WP_000730756.1\|2458726_2459794_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	4.8e-192	98.3
WP_000216225.1\|2459810_2460644_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	5.0e-120	84.1
WP_001098415.1\|2460786_2462553_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	98.0
WP_001289197.1\|2462552_2463590_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	9.7e-182	90.4
WP_000896204.1\|2463631_2465398_-	AIPR family protein	D0UIM0	Aggregatibacter_phage	1.5e-78	34.3
WP_000700647.1\|2465772_2466450_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|2466563_2466797_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154431.1\|2466807_2466996_-	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
WP_000073901.1\|2467149_2469525_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	92.3
WP_000164042.1\|2469521_2470352_-	hypothetical protein	A0A0M4RCP6	Salmonella_phage	9.3e-127	76.4
WP_000104123.1\|2470348_2471203_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	3.0e-120	76.4
WP_000785512.1\|2471199_2471427_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	9.6e-34	90.7
WP_001244241.1\|2471426_2471660_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	1.1e-32	97.4
WP_000963479.1\|2471727_2472069_-	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	4.6e-56	99.1
WP_000956168.1\|2472032_2472233_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	3.2e-33	100.0
WP_000460859.1\|2472240_2472750_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.6e-89	99.4
WP_000983960.1\|2473145_2473778_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.2e-110	95.2
WP_000155492.1\|2473779_2474799_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	5.6e-190	95.0
WP_001244284.1\|2474803_2476027_+	hypothetical protein	E5G6K9	Salmonella_phage	3.2e-75	38.9
WP_000113811.1\|2476392_2477634_+\|integrase	integrase	A0A1B5FPC6	Escherichia_phage	8.5e-100	47.1
2486257:2486273	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007530

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection