CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_016628	Vibrio furnissii NCTC 11218 chromosome 2, complete sequence	0 crisprs	csa3,PD-DExK,DEDDh,cas3	0	0	3	0
NC_016602	Vibrio furnissii NCTC 11218 chromosome 1, complete sequence	0 crisprs	DEDDh,csa3,cas3,WYL,DinG,csx1,RT	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

380415 : 413210

Vibrio_phage(22.22%)

capsid,head,terminase,portal,plate,integrase,tail

attL 380312:380332|attR 415203:415223

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
380312:380332	attL	NA	NA	NA	NA
WP_014257419.1\|380415_381420_-\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	8.2e-85	49.7
WP_014257420.1\|381747_382836_+	ParA family protein	NA	NA	NA	NA
WP_193386124.1\|382825_382966_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_041943166.1\|382986_383490_+	hypothetical protein	NA	NA	NA	NA
WP_014257421.1\|383526_384813_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_193386118.1\|384827_384920_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_041943168.1\|385020_385428_+	hypothetical protein	NA	NA	NA	NA
WP_193386119.1\|385488_386214_-	peptidase	M4MB93	Vibrio_phage	3.4e-24	29.6
WP_004726785.1\|386364_386823_+	hypothetical protein	NA	NA	NA	NA
WP_014257423.1\|386880_387420_+	phage regulatory CII family protein	A0A2I7RNI1	Vibrio_phage	3.4e-53	57.0
WP_004726788.1\|387429_387762_+	hypothetical protein	NA	NA	NA	NA
WP_020433788.1\|387834_388146_+	hypothetical protein	NA	NA	NA	NA
WP_014257424.1\|388127_388355_+	hypothetical protein	U3PIK2	Vibrio_phage	2.5e-26	72.0
WP_041943172.1\|388490_388871_-	hypothetical protein	NA	NA	NA	NA
WP_014257425.1\|388913_391544_+	replication endonuclease	A0A166YHE2	Vibrio_phage	2.3e-296	59.0
WP_014257426.1\|391553_391790_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_014257427.1\|391947_392571_+	hypothetical protein	NA	NA	NA	NA
WP_014257428.1\|392892_394083_+	DNA circularization N-terminal domain-containing protein	NA	NA	NA	NA
WP_004726803.1\|394079_395018_+	hypothetical protein	NA	NA	NA	NA
WP_004726805.1\|395010_395586_+\|plate	phage baseplate assembly protein V	B5TK73	Pseudomonas_phage	1.3e-10	30.5
WP_014257429.1\|395582_395969_+	phage GP46 family protein	NA	NA	NA	NA
WP_014257430.1\|395965_397012_+\|plate	baseplate J/gp47 family protein	Q8SBG4	Shigella_phage	5.6e-12	24.2
WP_014257431.1\|396993_397473_+	hypothetical protein	NA	NA	NA	NA
WP_014257432.1\|397469_398552_+\|tail	phage tail protein	A0A193H2T9	Shigella_phage	4.0e-13	36.7
WP_041943175.1\|398551_399478_+	hypothetical protein	NA	NA	NA	NA
WP_014257434.1\|399594_400011_+	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	4.2e-27	50.0
WP_004726817.1\|400021_400252_+	hypothetical protein	NA	NA	NA	NA
WP_004726819.1\|400242_400494_+	hypothetical protein	A0A1D9C9R8	Salinivibrio_phage	1.2e-08	45.2
WP_014257436.1\|401203_402115_-	hypothetical protein	NA	NA	NA	NA
WP_014257437.1\|402537_403155_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.7e-22	58.7
WP_193386120.1\|403305_403464_+	hypothetical protein	NA	NA	NA	NA
WP_041943177.1\|403453_404047_+	Fic family protein	S4TP71	Salmonella_phage	7.4e-09	29.5
WP_014257439.1\|404068_405025_-\|portal	phage portal protein	A0A0M3LS06	Mannheimia_phage	7.3e-59	42.4
WP_014257440.1\|405035_406760_-\|terminase	terminase	E5E3X0	Burkholderia_phage	5.5e-113	41.4
WP_014257441.1\|406930_407758_+\|capsid	GPO family capsid scaffolding protein	A0A2H4J928	uncultured_Caudovirales_phage	9.3e-18	33.8
WP_014257442.1\|407800_408838_+\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	1.1e-63	41.4
WP_014257443.1\|408946_409396_+\|head	head completion/stabilization protein	NA	NA	NA	NA
WP_014257444.1\|409395_409860_+\|tail	phage tail protein	NA	NA	NA	NA
WP_014257445.1\|409856_410396_+	phage virion morphogenesis protein	NA	NA	NA	NA
WP_014257446.1\|410396_410579_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_014257447.1\|410575_411709_+\|tail	phage tail sheath subtilisin-like domain-containing protein	C9DGP7	Escherichia_phage	9.0e-48	38.7
WP_004726844.1\|411712_412078_+\|tail	phage tail tube protein	NA	NA	NA	NA
WP_014257448.1\|412088_412796_+	hypothetical protein	NA	NA	NA	NA
WP_014257449.1\|412779_413067_+\|tail	phage tail assembly protein	E5FFG7	Burkholderia_phage	4.8e-06	39.3
WP_014257450.1\|413102_413210_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
415203:415223	attR	NA	NA	NA	NA

DBSCAN-SWA_2

938368 : 946018

Clostridium_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041943260.1\|938368_938986_+	3'-5' exonuclease	A0A0A7RWA3	Clostridium_phage	2.5e-20	36.1
WP_014257811.1\|939177_939822_-	CatB-related O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	2.5e-18	37.8
WP_014257812.1\|940066_940657_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_014257813.1\|940796_941768_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	5.3e-65	45.5
WP_004727460.1\|941784_942111_-	thiol reductase thioredoxin	A0A023NHA9	Dinoroseobacter_phage	9.0e-09	33.0
WP_081454240.1\|942211_942535_-	thioredoxin fold domain-containing protein	A0A2K9L3H4	Tupanvirus	6.4e-07	29.5
WP_004727458.1\|942546_942975_-	OsmC family protein	NA	NA	NA	NA
WP_041943262.1\|943015_944200_-	MFS transporter	NA	NA	NA	NA
WP_004727456.1\|944623_946018_-	dihydrolipoyl dehydrogenase	G3MA85	Bacillus_virus	1.8e-05	25.1

DBSCAN-SWA_3

974841 : 982050

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014257837.1\|974841_976155_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-17	44.4
WP_014257838.1\|976397_977198_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.0e-53	47.0
WP_014257839.1\|977464_978370_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	1.5e-109	73.2
WP_014257840.1\|978372_979629_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	8.5e-132	60.2
WP_014257841.1\|979625_980258_+	aldolase	A0A077SK32	Escherichia_phage	4.0e-69	62.1
WP_014257842.1\|980257_981034_+	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_014257843.1\|981078_982050_+	SDR family oxidoreductase	A0A0G3FXV3	Raccoon_poxvirus	1.6e-05	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_016602

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

347293 : 406203

Natrialba_phage(14.29%)

holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004728720.1\|347293_348655_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_014204174.1\|348723_349053_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_014204175.1\|349046_349457_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_014204176.1\|349514_350228_-	hypothetical protein	NA	NA	NA	NA
WP_014204177.1\|350238_350880_-	phosphate propanoyltransferase	NA	NA	NA	NA
WP_014204178.1\|350876_351464_-	BMC domain-containing protein	NA	NA	NA	NA
WP_014204179.1\|351473_352448_-\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA
WP_014204180.1\|352541_355958_-\|holin	choline trimethylamine-lyase	NA	NA	NA	NA
WP_014204181.1\|356042_357191_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_014204182.1\|357206_357464_-	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_148227969.1\|357489_359124_-	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_014204184.1\|359183_359462_-	BMC domain-containing protein	NA	NA	NA	NA
WP_014204185.1\|359473_359758_-	BMC domain-containing protein	NA	NA	NA	NA
WP_014204186.1\|359778_360057_-	BMC domain-containing protein	NA	NA	NA	NA
WP_014204187.1\|360739_361246_-	hypothetical protein	NA	NA	NA	NA
WP_014204188.1\|361248_362046_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014204189.1\|362715_363150_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_004728718.1\|363638_365534_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_014204190.1\|365533_366169_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_014204191.1\|366184_366958_+	ParA family protein	Q8JL10	Natrialba_phage	1.1e-17	31.9
WP_014204192.1\|366981_367863_+	ParB/RepB/Spo0J family partition protein	A0A2K9V477	Faecalibacterium_phage	9.6e-13	32.2
WP_041942458.1\|368050_368440_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004728713.1\|368448_369261_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_002540812.1\|369320_369575_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_041942459.1\|369653_370124_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004728711.1\|370139_370673_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_038152645.1\|370686_372228_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004728709.1\|372271_373138_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004728708.1\|373172_374576_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004728707.1\|374594_375017_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_041942460.1\|375170_376532_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	1.7e-29	34.3
WP_041942657.1\|376566_377301_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_041942461.1\|377397_378171_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004728703.1\|378262_379465_-	Bcr/CflA family multidrug efflux MFS transporter	NA	NA	NA	NA
WP_014204198.1\|379618_380524_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004728701.1\|380578_381742_-	acetyl-CoA C-acyltransferase FadA	NA	NA	NA	NA
WP_014204199.1\|381767_383939_-	fatty acid oxidation complex subunit alpha FadB	NA	NA	NA	NA
WP_004728699.1\|384156_384780_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	1.2e-22	40.9
WP_004728698.1\|384813_386271_+	potassium transporter	NA	NA	NA	NA
WP_014204200.1\|386281_386806_+	menaquinone-dependent protoporphyrinogen IX dehydrogenase	NA	NA	NA	NA
WP_014204201.1\|393139_394522_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004724280.1\|394660_395044_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	1.4e-08	38.6
WP_014204202.1\|395304_397254_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_014204203.1\|397257_398460_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_014204204.1\|398446_399256_+	HesA/MoeB/ThiF family protein	NA	NA	NA	NA
WP_014204205.1\|399252_399459_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_004724285.1\|399464_400235_+	thiazole synthase	NA	NA	NA	NA
WP_014204206.1\|400231_401344_+	2-iminoacetate synthase ThiH	NA	NA	NA	NA
WP_014204207.1\|401466_402651_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-27	34.2
WP_014204208.1\|402647_403490_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_041942658.1\|403541_404459_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_014204210.1\|404481_406203_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	8.8e-63	32.7

DBSCAN-SWA_2

1103167 : 1109711

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172475410.1\|1103167_1104301_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.5e-66	42.6
WP_014204549.1\|1104312_1105563_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.2e-94	46.9
WP_014204550.1\|1105665_1106115_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_014204551.1\|1106128_1107238_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.5e-42	34.0
WP_014204552.1\|1107240_1107897_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.1e-33	38.0
WP_004724911.1\|1107938_1109048_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	7.0e-61	39.8
WP_004724909.1\|1109240_1109711_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.9e-31	47.3

DBSCAN-SWA_3

2579554 : 2632096

Vibrio_phage(76.32%)

tail,terminase,portal,head,tRNA,integrase,plate,capsid

attL 2617392:2617405|attR 2636923:2636936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014205445.1\|2579554_2580256_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_014205446.1\|2580264_2582193_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	7.8e-92	32.8
WP_004726590.1\|2582424_2582625_-	hypothetical protein	NA	NA	NA	NA
WP_004726591.1\|2582917_2583751_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	3.7e-14	41.6
WP_014205447.1\|2583826_2585830_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_014205448.1\|2586043_2587894_+	signal peptide peptidase SppA	V5Q7L6	Xylella_phage	6.9e-13	29.1
WP_004726595.1\|2588027_2589041_+	asparaginase	NA	NA	NA	NA
WP_004726596.1\|2589116_2589401_-	YeaC family protein	NA	NA	NA	NA
WP_038151480.1\|2589512_2590334_+	DUF2989 domain-containing protein	NA	NA	NA	NA
WP_004726598.1\|2590365_2590782_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_014205449.1\|2591120_2592116_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_014205450.1\|2592380_2593265_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA
WP_014205451.1\|2593347_2594178_+	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_041942587.1\|2594254_2595190_+	ChaN family lipoprotein	NA	NA	NA	NA
WP_004726603.1\|2595323_2595677_+	hypothetical protein	NA	NA	NA	NA
WP_014205453.1\|2596007_2596916_-	SEC-C domain-containing protein	A0A2H4JE36	uncultured_Caudovirales_phage	6.8e-30	33.1
WP_148227984.1\|2597696_2598617_+	hypothetical protein	NA	NA	NA	NA
WP_014205455.1\|2598709_2598907_-	hypothetical protein	A0A2I7RNJ8	Vibrio_phage	6.4e-18	76.6
WP_041942589.1\|2598908_2599604_-	hypothetical protein	A0A2I7RNK2	Vibrio_phage	9.3e-112	83.5
WP_014205457.1\|2599594_2600284_-	hypothetical protein	A0A2I7RNK1	Vibrio_phage	7.7e-119	86.9
WP_014205458.1\|2600304_2600841_-	hypothetical protein	A0A2I7RNK5	Vibrio_phage	3.6e-79	85.9
WP_041942590.1\|2600844_2601114_-	hypothetical protein	NA	NA	NA	NA
WP_041942703.1\|2603506_2604076_-	hemolysins-related protein	A0A2I7RNJ4	Vibrio_phage	1.0e-92	83.1
WP_014205462.1\|2604095_2605283_-\|plate	baseplate J/gp47 family protein	A0A2I7RNJ7	Vibrio_phage	2.0e-191	82.8
WP_014205463.1\|2605275_2605608_-	DUF2590 family protein	A0A2I7RNH9	Vibrio_phage	7.4e-43	81.3
WP_014205464.1\|2605607_2607494_-\|tail	phage tail tape measure protein	A0A1D9C9V3	Salinivibrio_phage	9.2e-231	60.7
WP_014205465.1\|2607504_2607648_-	hypothetical protein	A5X9I8	Aeromonas_virus	5.3e-06	51.1
WP_014205466.1\|2607689_2607953_-\|tail	putative phage tail assembly chaperone	A0A2I7RNJ9	Vibrio_phage	3.2e-17	54.0
WP_014205467.1\|2607949_2608228_-	hypothetical protein	NA	NA	NA	NA
WP_014205468.1\|2608228_2608813_-	hypothetical protein	A0A1D9CA16	Salinivibrio_phage	3.4e-59	60.8
WP_041942591.1\|2608818_2609241_-	hypothetical protein	A0A2I7RB50	Vibrio_phage	4.7e-42	62.6
WP_041942592.1\|2609248_2609455_-	TraR/DksA C4-type zinc finger protein	A0A2I7RNJ6	Vibrio_phage	8.7e-18	64.7
WP_014205470.1\|2609467_2609923_-	DUF2597 family protein	A0A2I7RNI0	Vibrio_phage	2.7e-75	90.1
WP_014205471.1\|2609926_2611048_-	DUF2586 domain-containing protein	A0A2I7RNI8	Vibrio_phage	1.1e-173	81.4
WP_014205472.1\|2611070_2611739_-	hypothetical protein	A0A1D9C9S1	Salinivibrio_phage	2.0e-39	41.4
WP_014205473.1\|2611728_2612214_-\|tail	phage tail protein	A0A2I7RNH2	Vibrio_phage	1.6e-62	72.6
WP_014205474.1\|2612210_2612630_-\|head	head completion/stabilization protein	A0A2I7RNH7	Vibrio_phage	7.2e-51	73.4
WP_014205475.1\|2612746_2613457_-\|terminase	terminase endonuclease subunit	U3PCG2	Vibrio_phage	4.7e-103	76.1
WP_014205476.1\|2613467_2614478_-\|capsid	phage major capsid protein, P2 family	R9TPZ5	Vibrio_phage	3.5e-104	60.4
WP_014205477.1\|2614477_2615380_-\|capsid	GPO family capsid scaffolding protein	R9TRS3	Vibrio_phage	3.4e-106	66.8
WP_014205478.1\|2615551_2617375_+\|terminase	terminase ATPase subunit family protein	U3PIL1	Vibrio_phage	3.9e-295	85.4
WP_014205479.1\|2617371_2618403_+\|portal	phage portal protein	U3PFK6	Vibrio_phage	7.7e-171	84.5
2617392:2617405	attL	NA	NA	NA	NA
WP_014205480.1\|2618407_2619193_-	hypothetical protein	NA	NA	NA	NA
WP_075989875.1\|2619345_2619597_+	ogr/Delta-like zinc finger family protein	R9TNQ2	Vibrio_phage	2.8e-34	84.3
WP_014205482.1\|2619591_2619810_-	hypothetical protein	Q8HA64	Vibrio_phage	7.5e-28	90.3
WP_014205484.1\|2620483_2621278_+	hypothetical protein	NA	NA	NA	NA
WP_041942594.1\|2621267_2621690_+	hypothetical protein	NA	NA	NA	NA
WP_014205485.1\|2621700_2624604_-	replication endonuclease	R9TNQ0	Vibrio_phage	4.7e-250	51.9
WP_014205486.1\|2624677_2624914_-	hypothetical protein	R9TPY7	Vibrio_phage	1.6e-31	82.1
WP_014205487.1\|2624895_2625363_-	DUF3850 domain-containing protein	A0A0A8WI22	Clostridium_phage	2.2e-08	35.1
WP_014205488.1\|2625359_2625656_-	hypothetical protein	NA	NA	NA	NA
WP_041942595.1\|2625738_2626023_-	hypothetical protein	R9TPY3	Vibrio_phage	4.4e-20	57.4
WP_014205490.1\|2626034_2626574_-	phage regulatory CII family protein	R9TRR3	Vibrio_phage	9.8e-53	58.1
WP_041942596.1\|2626684_2626885_-	hypothetical protein	A0A2I7RNG9	Vibrio_phage	3.1e-12	51.5
WP_049781801.1\|2627041_2627695_+	helix-turn-helix domain-containing protein	R9TR74	Vibrio_phage	6.5e-75	65.3
WP_049781803.1\|2627717_2628140_+	hypothetical protein	R9TPX9	Vibrio_phage	4.5e-37	56.1
WP_014205494.1\|2628168_2628357_+	hypothetical protein	NA	NA	NA	NA
WP_014205495.1\|2628410_2629526_+	hypothetical protein	NA	NA	NA	NA
WP_041942597.1\|2629522_2629939_+	hypothetical protein	NA	NA	NA	NA
WP_049781805.1\|2629942_2630641_+	hypothetical protein	NA	NA	NA	NA
WP_014205497.1\|2631037_2632096_+\|integrase	tyrosine-type recombinase/integrase	A0A2I7RNH5	Vibrio_phage	2.8e-176	86.5
2636923:2636936	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2890181 : 2897225

Megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004729403.1\|2890181_2890613_-	nucleoside-diphosphate kinase	K7YW26	Megavirus	4.4e-19	38.3
WP_004729404.1\|2890679_2891972_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.7e-34	34.1
WP_004729407.1\|2892148_2892343_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_004729409.1\|2892398_2892737_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_014205650.1\|2892750_2894604_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	4.2e-111	40.5
WP_014205651.1\|2894625_2895141_-	co-chaperone HscB	NA	NA	NA	NA
WP_004729414.1\|2895207_2895531_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	5.5e-27	54.2
WP_004729416.1\|2895590_2895974_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	9.1e-53	76.6
WP_004729418.1\|2896010_2897225_-	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	6.3e-31	30.2

DBSCAN-SWA_5

3106307 : 3117454

uncultured_Mediterranean_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014205774.1\|3106307_3108890_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.3e-78	38.7
WP_014205775.1\|3109077_3109548_-	recombination regulator RecX	NA	NA	NA	NA
WP_004723845.1\|3109642_3110695_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	6.3e-112	60.7
WP_014205776.1\|3110867_3111356_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	3.4e-28	48.7
WP_014205777.1\|3111440_3114002_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.5e-34	23.6
WP_004723838.1\|3114070_3115060_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.3e-34	34.5
WP_014205778.1\|3115132_3116068_-	murein hydrolase activator NlpD	I3PV79	Clostridium_phage	3.0e-12	31.7
WP_014205779.1\|3116067_3116694_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.7e-35	51.5
WP_004723832.1\|3116686_3117454_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-67	52.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_016628

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_016602

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection