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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_014721 Caldicellulosiruptor kristjanssonii I77R1B, complete sequence 13 crisprs cas14j,cas14k,csa3,cas4,Cas14b_CAS-V-F,cas3,DEDDh,cas6,cas2,cas1,cas5,cas7,cas7b,cas8b1,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,cmr3gr5,cmr5gr11,cmr4gr7,cmr6gr7,cmr1gr7,csx20,csm6,csx10gr5,WYL 0 22 6 0
NC_014719 Caldicellulosiruptor kristjanssonii I77R1B plasmid pCALKR01, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_014721
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_1 207297-207461 TypeV NA
2 spacers
cas14k

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_2 2496982-2506688 Unclear I-A
147 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_3 2652729-2654679 TypeI-B NA
29 spacers
cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_4 2666352-2668217 TypeIII NA
27 spacers
cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,cas6,csm5gr7,csm4gr5,csm3gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_5 2669623-2673685 TypeIII NA
61 spacers
cas8b1,cas7b,cas5,cas3,cas4,cas1,cas2,cas6,csm5gr7,csm4gr5,csm3gr7,csm2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_6 2689674-2691480 TypeIII NA
27 spacers
cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx1,cmr3gr5,cmr5gr11,cmr4gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_7 2695882-2697289 TypeIII NA
21 spacers
csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cmr3gr5,cmr5gr11,cmr4gr7,cmr6gr7,cmr1gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_8 2708850-2712824 TypeIII I-A
60 spacers
cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,csx20

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_9 2720576-2722684 TypeIII NA
31 spacers
csx20,cas4,cas1,cas2,cas8b1,cas7,cas5,cas3,csx1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_10 2731763-2732193 TypeI NA
6 spacers
cas3,cas5,cas7,cas8b1,cas2,cas1,cas4,csx20,csx1,Cas14b_CAS-V-F,csm6,csm2gr11,csm3gr7

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_11 2740675-2740907 TypeI NA
3 spacers
Cas14b_CAS-V-F,csx1,cas3,cas5,cas7,cas8b1,csm6,csm2gr11,csm3gr7,csx10gr5,cas10

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_12 2742876-2742973 TypeI NA
1 spacers
Cas14b_CAS-V-F,csx1,cas3,cas5,cas7,csm6,csm2gr11,csm3gr7,csx10gr5,cas10,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_014721_13 2753369-2753468 TypeIII NA
1 spacers
cas6,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,WYL

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 MK448795 Streptococcus phage Javan527, complete genome 4637-4662 3 0.885
NC_014721_8 8.37|2711251|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2711251-2711286 36 MF360958 Salicola phage SCTP-2, complete genome 246064-246099 6 0.833
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 NZ_CP020859 Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence 116181-116206 6 0.769
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 NZ_AP014865 Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence 105729-105754 6 0.769
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 NZ_CP050184 Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence 178972-178997 6 0.769
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 LT960552 Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite 301828-301853 6 0.769
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 LR596615 Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I 304084-304109 6 0.769
NC_014721_9 9.1|2720606|26|NC_014721|CRT 2720606-2720631 26 NC_042116 Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite 304084-304109 6 0.769
NC_014721_9 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder 2720931-2720967 37 KY794642 Staphylococcus phage vB_Sau_Clo6, complete genome 53571-53607 6 0.838
NC_014721_9 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder 2720931-2720967 37 NC_023573 Staphylococcus phage phiSA012 DNA, complete genome 89272-89308 6 0.838
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 MT074146 Bacteroides phage SJC03, complete genome 93559-93594 7 0.806
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 MT074139 Bacteroides phage DAC19, complete genome 104517-104552 7 0.806
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 JN800508 Clostridium phage phi24R, complete genome 17005-17040 7 0.806
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 MT074140 Bacteroides phage DAC20, complete genome 104516-104551 7 0.806
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 MH999279 Clostridium phage CPD2, complete genome 15483-15518 7 0.806
NC_014721_8 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2710794-2710830 37 MT684590 Streptomyces phage LilMartin, complete genome 50061-50097 7 0.811
NC_014721_8 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2710794-2710830 37 MT897905 Streptomyces phage MulchMansion, complete genome 50061-50097 7 0.811
NC_014721_9 9.21|2721948|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder 2721948-2721984 37 JX094431 Bacillus cereus bacteriophage vB_BceM_Bc431v3, complete genome 101344-101380 7 0.811
NC_014721_5 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670119-2670152 34 NZ_CP009332 Bacillus thuringiensis strain HD1011 plasmid 3, complete sequence 13625-13658 8 0.765
NC_014721_5 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670119-2670152 34 NZ_CP053977 Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed1, complete sequence 16794-16827 8 0.765
NC_014721_5 5.21|2670979|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670979-2671015 37 NC_015695 Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence 28693-28729 8 0.784
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250021 Prevotella phage Lak-B2, complete genome 483215-483249 8 0.771
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250023 Prevotella phage Lak-B4, complete genome 482446-482480 8 0.771
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250027 Prevotella phage Lak-B8, complete genome 482977-483011 8 0.771
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250026 Prevotella phage Lak-B7, complete genome 482014-482048 8 0.771
NC_014721_2 2.33|2499118|38|NC_014721|CRISPRCasFinder 2499118-2499155 38 NC_012036 Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence 1950-1987 9 0.763
NC_014721_2 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR 2505240-2505277 38 KX827371 Staphylococcus phage SpT99F3, complete genome 40048-40085 9 0.763
NC_014721_2 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR 2505240-2505277 38 NC_007051 Staphylococcus phage 2638A, complete genome 22391-22428 9 0.763
NC_014721_2 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR 2505240-2505277 38 MK450538 Staphylococcus phage vB_SpsS_QT1, complete genome 23956-23993 9 0.763
NC_014721_2 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR 2505240-2505277 38 MK075004 Staphylococcus phage phiSP119-1, complete genome 48825-48862 9 0.763
NC_014721_2 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR 2505240-2505277 38 AY954954 Bacteriophage 2638A, complete genome 22391-22428 9 0.763
NC_014721_5 5.7|2670054|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670054-2670088 35 MT345684 Alteromonas phage vB_AcoS-R7M, complete genome 17913-17947 9 0.743
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 74254-74289 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 66101-66136 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 81223-81258 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 84391-84426 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 93715-93750 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP013198 Spiroplasma citri strain R8-A2 plasmid pSCI26, complete sequence 20855-20890 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP013199 Spiroplasma citri strain R8-A2 plasmid pSCI15, complete sequence 1815-1850 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 NZ_CP047445 Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8 27224-27259 9 0.75
NC_014721_5 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2673225-2673260 36 X51344 Spiroplasma phage 1-R8A2B complete genome 7116-7151 9 0.75
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250024 Prevotella phage Lak-B5, complete genome 475822-475856 9 0.743
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250028 Prevotella phage Lak-B9, complete genome 480253-480287 9 0.743
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250025 Prevotella phage Lak-B6, complete genome 478915-478949 9 0.743
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250022 Prevotella phage Lak-B3, complete genome 479005-479039 9 0.743
NC_014721_6 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2689704-2689738 35 MK250020 Prevotella phage Lak-B1, complete genome 480236-480270 9 0.743
NC_014721_9 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder 2720931-2720967 37 MK798156 Enterococcus hirae strain fas4 plasmid pfas4-2, complete sequence 796-832 9 0.757
NC_014721_2 2.134|2505770|37|NC_014721|CRISPRCasFinder,PILER-CR 2505770-2505806 37 NZ_CP024793 Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence 31208-31244 10 0.73
NC_014721_2 2.180|2499118|39|NC_014721|CRT 2499118-2499156 39 NC_012036 Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence 1950-1988 10 0.744
NC_014721_3 3.5|2653024|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653024-2653060 37 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 197444-197480 10 0.73
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 NZ_CP024398 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp27, complete sequence 17969-18004 10 0.722
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 NZ_CP024214 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-7 8652-8687 10 0.722
NC_014721_3 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653881-2653916 36 NZ_CP024360 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-6 17967-18002 10 0.722
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NZ_CP016275 Yersinia pestis strain Cadman plasmid pMT1, complete sequence 46903-46939 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NZ_CP009490 Yersinia pestis strain PBM19 plasmid pMT1, complete sequence 23891-23927 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NZ_CP009784 Yersinia pestis strain El Dorado plasmid pMT, complete sequence 44600-44636 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NZ_CP009722 Yersinia pestis strain Shasta plasmid pMT, complete sequence 10272-10308 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NC_003134 Yersinia pestis CO92 plasmid pMT1, complete sequence 35157-35193 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NC_017158 Yersinia pestis D182038 plasmid pMT1, complete sequence 35157-35193 10 0.73
NC_014721_5 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2669653-2669689 37 NZ_CP009841 Yersinia pestis A1122 plasmid pMT, complete sequence 72724-72760 10 0.73
NC_014721_5 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670119-2670152 34 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 304317-304350 10 0.706
NC_014721_5 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670516-2670552 37 NZ_CP046163 Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence 1271903-1271939 10 0.73
NC_014721_5 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670516-2670552 37 NZ_CP046066 Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence 1455295-1455331 10 0.73
NC_014721_5 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2670516-2670552 37 NZ_CP045356 Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence 304609-304645 10 0.73
NC_014721_8 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR 2710794-2710830 37 NZ_CP017242 Rhizobium etli 8C-3 plasmid pRsp8C3a, complete sequence 87455-87491 10 0.73
NC_014721_2 2.19|2498196|36|NC_014721|CRISPRCasFinder 2498196-2498231 36 NC_024210 Escherichia phage e4/1c, complete genome 27612-27647 11 0.694
NC_014721_3 3.15|2653684|38|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653684-2653721 38 LR215718 Staphylococcus phage Stab20 genome assembly, chromosome: I 5886-5923 11 0.711
NC_014721_3 3.15|2653684|38|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2653684-2653721 38 LR215718 Staphylococcus phage Stab20 genome assembly, chromosome: I 148410-148447 11 0.711
NC_014721_6 6.19|2690885|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT 2690885-2690921 37 NC_012036 Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence 837-873 11 0.703
NC_014721_2 2.166|2498196|37|NC_014721|CRT 2498196-2498232 37 NC_024210 Escherichia phage e4/1c, complete genome 27612-27648 12 0.676

1. spacer 9.1|2720606|26|NC_014721|CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 3, identity: 0.885

ctataatgcatttgatatcaattatt	CRISPR spacer
cgataatgcattttatatcaataatt	Protospacer
* *********** ******** ***

2. spacer 8.37|2711251|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 6, identity: 0.833

attaatatga----gtattcaaatcttctaatgttttact	CRISPR spacer
----atatgaggatgtattcaaatcttcaaatgctttact	Protospacer
    ******    ************** ****.******

3. spacer 9.1|2720606|26|NC_014721|CRT matches to NZ_CP020859 (Lactobacillus salivarius strain ZLS006 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
gtataatgcatttgatatcattagaa	Protospacer
 ******************* * .  

4. spacer 9.1|2720606|26|NC_014721|CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
atataatacatttgatatcaatggaa	Protospacer
 ******.************** .  

5. spacer 9.1|2720606|26|NC_014721|CRT matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
atataatacatttgatatcaatggaa	Protospacer
 ******.************** .  

6. spacer 9.1|2720606|26|NC_014721|CRT matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
gtataatgcatttgatatcacccaaa	Protospacer
 ******************* ..*  

7. spacer 9.1|2720606|26|NC_014721|CRT matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
gtataatgcatttgatatcacccaaa	Protospacer
 ******************* ..*  

8. spacer 9.1|2720606|26|NC_014721|CRT matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 6, identity: 0.769

ctataatgcatttgatatcaattatt	CRISPR spacer
gtataatgcatttgatatcacccaaa	Protospacer
 ******************* ..*  

9. spacer 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder matches to KY794642 (Staphylococcus phage vB_Sau_Clo6, complete genome) position: , mismatch: 6, identity: 0.838

--ttttttataacctcctttttgttttacaattataatt	CRISPR spacer
cagttttgata--ctcctttttcttttacaattttaatt	Protospacer
   **** ***  ********* ********** *****

10. spacer 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder matches to NC_023573 (Staphylococcus phage phiSA012 DNA, complete genome) position: , mismatch: 6, identity: 0.838

--ttttttataacctcctttttgttttacaattataatt	CRISPR spacer
cagttttgata--ctcctttttcttttacaattttaatt	Protospacer
   **** ***  ********* ********** *****

11. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 7, identity: 0.806

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aaaatttagatgaaataaaaaaatatttaaaaaatt	Protospacer
* ************ * ************* .* * 

12. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 7, identity: 0.806

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aaaatttagatgaaataaaaaaatatttaaaaaatt	Protospacer
* ************ * ************* .* * 

13. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to JN800508 (Clostridium phage phi24R, complete genome) position: , mismatch: 7, identity: 0.806

ataatttagatgaatttaaaaaatattt-aatgacta	CRISPR spacer
caaaattagatgaatataaaaaatatttaaataagt-	Protospacer
  ** ********** ************ ***.* * 

14. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 7, identity: 0.806

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aaaatttagatgaaataaaaaaatatttaaaaaatt	Protospacer
* ************ * ************* .* * 

15. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MH999279 (Clostridium phage CPD2, complete genome) position: , mismatch: 7, identity: 0.806

ataatttagatgaatttaaaaaatattt-aatgacta	CRISPR spacer
caaaattagatgaatataaaaaatatttaaataagt-	Protospacer
  ** ********** ************ ***.* * 

16. spacer 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to MT684590 (Streptomyces phage LilMartin, complete genome) position: , mismatch: 7, identity: 0.811

---taagcttctggttctcctcttcaagcttcttgatata	CRISPR spacer
tgatgagctt---gttctcatcttcaagcttcttgatacg	Protospacer
   *.*****   ****** ******************..

17. spacer 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to MT897905 (Streptomyces phage MulchMansion, complete genome) position: , mismatch: 7, identity: 0.811

---taagcttctggttctcctcttcaagcttcttgatata	CRISPR spacer
tgatgagctt---gttctcatcttcaagcttcttgatacg	Protospacer
   *.*****   ****** ******************..

18. spacer 9.21|2721948|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder matches to JX094431 (Bacillus cereus bacteriophage vB_BceM_Bc431v3, complete genome) position: , mismatch: 7, identity: 0.811

tcttgtagtttagctaattcttcttcatt--tgtgctgg	CRISPR spacer
tcttgaagttcagctaattcttcttctgtagcgtgct--	Protospacer
***** ****.***************  *  .*****  

19. spacer 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009332 (Bacillus thuringiensis strain HD1011 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.765

taattaaaactagcaatttaataatcccccgcaa	CRISPR spacer
taatgaaaactagcaattaaataaaatcgcccta	Protospacer
**** ************* *****  .* * * *

20. spacer 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053977 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

taattaaaactagcaatttaataatcccccgcaa	CRISPR spacer
taatgaaaactagcaattaaataaaatcgcccta	Protospacer
**** ************* *****  .* * * *

21. spacer 5.21|2670979|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NC_015695 (Runella slithyformis DSM 19594 plasmid pRUNSL05, complete sequence) position: , mismatch: 8, identity: 0.784

gaccctctaattgtttttgttttgactgataaaattt	CRISPR spacer
aattctgacattgtttttgttttgacagaaaaaattt	Protospacer
.*..**   ***************** ** *******

22. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 8, identity: 0.771

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
atctcttcattgttattttattaacaatacaaaga	Protospacer
 *.*. ************* ********.**  **

23. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 8, identity: 0.771

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
atctcttcattgttattttattaacaatacaaaga	Protospacer
 *.*. ************* ********.**  **

24. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 8, identity: 0.771

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
atctcttcattgttattttattaacaatacaaaga	Protospacer
 *.*. ************* ********.**  **

25. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 8, identity: 0.771

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
atctcttcattgttattttattaacaatacaaaga	Protospacer
 *.*. ************* ********.**  **

26. spacer 2.33|2499118|38|NC_014721|CRISPRCasFinder matches to NC_012036 (Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence) position: , mismatch: 9, identity: 0.763

tatcgatgactttccaagttagaaagtcacctttgcaa	CRISPR spacer
ttaaaatgactttccaagttaggaagtcaccttttagg	Protospacer
*   .*****************.***********  ..

27. spacer 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR matches to KX827371 (Staphylococcus phage SpT99F3, complete genome) position: , mismatch: 9, identity: 0.763

gtgatataatataattagaaagttgaaaataaaaaacg	CRISPR spacer
gtgatataatatatatagaaagttgaagggaggaaaaa	Protospacer
*************  ************.. *..*** .

28. spacer 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR matches to NC_007051 (Staphylococcus phage 2638A, complete genome) position: , mismatch: 9, identity: 0.763

gtgatataatataattagaaagttgaaaataaaaaacg	CRISPR spacer
gtgatataatatatatagaaagttgaagggaggaaaaa	Protospacer
*************  ************.. *..*** .

29. spacer 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR matches to MK450538 (Staphylococcus phage vB_SpsS_QT1, complete genome) position: , mismatch: 9, identity: 0.763

gtgatataatataattagaaagttgaaaataaaaaacg	CRISPR spacer
gtgatataatatatatagaaagttgaagggaggaaaaa	Protospacer
*************  ************.. *..*** .

30. spacer 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR matches to MK075004 (Staphylococcus phage phiSP119-1, complete genome) position: , mismatch: 9, identity: 0.763

gtgatataatataattagaaagttgaaaataaaaaacg	CRISPR spacer
gtgatataatatatatagaaagttgaagggaggaaaaa	Protospacer
*************  ************.. *..*** .

31. spacer 2.126|2505240|38|NC_014721|CRISPRCasFinder,PILER-CR matches to AY954954 (Bacteriophage 2638A, complete genome) position: , mismatch: 9, identity: 0.763

gtgatataatataattagaaagttgaaaataaaaaacg	CRISPR spacer
gtgatataatatatatagaaagttgaagggaggaaaaa	Protospacer
*************  ************.. *..*** .

32. spacer 5.7|2670054|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MT345684 (Alteromonas phage vB_AcoS-R7M, complete genome) position: , mismatch: 9, identity: 0.743

tacttcttaatgcgttgcttttattccagcggaaa	CRISPR spacer
tgtggcatagtgcgttgcttgtattccagcgggga	Protospacer
*..  * **.********** ***********..*

33. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

34. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

35. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

36. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

37. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

38. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013198 (Spiroplasma citri strain R8-A2 plasmid pSCI26, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

39. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013199 (Spiroplasma citri strain R8-A2 plasmid pSCI15, complete sequence) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

40. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047445 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-8) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

41. spacer 5.55|2673225|36|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to X51344 (Spiroplasma phage 1-R8A2B complete genome) position: , mismatch: 9, identity: 0.75

ctgagataaaatcatttaatttaagtcttacattag	CRISPR spacer
atcatataaactcatttaatttaagtctttcaaatc	Protospacer
 * * ***** ****************** **    

42. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 9, identity: 0.743

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
aactcttcattgttattttattaacaatacaaaga	Protospacer
  .*. ************* ********.**  **

43. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 9, identity: 0.743

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
aactcttcattgttattttattaacaatacaaaga	Protospacer
  .*. ************* ********.**  **

44. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 9, identity: 0.743

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
aactcttcattgttattttattaacaatacaaaga	Protospacer
  .*. ************* ********.**  **

45. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 9, identity: 0.743

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
aactcttcattgttattttattaacaatacaaaga	Protospacer
  .*. ************* ********.**  **

46. spacer 6.1|2689704|35|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 9, identity: 0.743

tttttatcattgttatttttttaacaatgcattga	CRISPR spacer
aactcttcattgttattttattaacaatacaaaga	Protospacer
  .*. ************* ********.**  **

47. spacer 9.6|2720931|37|NC_014721|CRT,PILER-CR,CRISPRCasFinder matches to MK798156 (Enterococcus hirae strain fas4 plasmid pfas4-2, complete sequence) position: , mismatch: 9, identity: 0.757

ttttttataacctcctttttgttttacaattataatt	CRISPR spacer
gcctttataaactcctttttgttttgcaattgctata	Protospacer
 ..******* **************.*****.. ** 

48. spacer 2.134|2505770|37|NC_014721|CRISPRCasFinder,PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.73

gtacagacaaaaataaaaaatgagcacgcttttttta	CRISPR spacer
ggtgaaacaaaaataacaaatgagcaagctttatcct	Protospacer
*   *.********** ********* ***** *.. 

49. spacer 2.180|2499118|39|NC_014721|CRT matches to NC_012036 (Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence) position: , mismatch: 10, identity: 0.744

tatcgatgactttccaagttagaaagtcacctttgcaag	CRISPR spacer
ttaaaatgactttccaagttaggaagtcaccttttagga	Protospacer
*   .*****************.***********  ...

50. spacer 3.5|2653024|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.73

gcataataagaaggtttaaaaaaattgaatatactat------	CRISPR spacer
gcataataagaagcttaaaaaaaat------ttttatttaaaa	Protospacer
************* ** ********      * .***      

51. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024398 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp27, complete sequence) position: , mismatch: 10, identity: 0.722

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aatttttatatgaatttaaaaaagatttaaaaaaat	Protospacer
*   **** ************** ****** .*   

52. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024214 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-7) position: , mismatch: 10, identity: 0.722

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aatttttatatgaatttaaaaaagatttaaaaaaat	Protospacer
*   **** ************** ****** .*   

53. spacer 3.18|2653881|36|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024360 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-6) position: , mismatch: 10, identity: 0.722

ataatttagatgaatttaaaaaatatttaatgacta	CRISPR spacer
aatttttatatgaatttaaaaaagatttaaaaaaat	Protospacer
*   **** ************** ****** .*   

54. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016275 (Yersinia pestis strain Cadman plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

55. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009490 (Yersinia pestis strain PBM19 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

56. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009784 (Yersinia pestis strain El Dorado plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

57. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009722 (Yersinia pestis strain Shasta plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

58. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NC_003134 (Yersinia pestis CO92 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

59. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NC_017158 (Yersinia pestis D182038 plasmid pMT1, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

60. spacer 5.1|2669653|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009841 (Yersinia pestis A1122 plasmid pMT, complete sequence) position: , mismatch: 10, identity: 0.73

acaattaaaaaattttcttcaatacaaacatcatcag-----	CRISPR spacer
ggaataaaaaaattttcttcaataaaa-----atcaaagtct	Protospacer
. *** ****************** **     ****.     

61. spacer 5.8|2670119|34|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 10, identity: 0.706

taattaaaactagcaatttaataatcccccgcaa	CRISPR spacer
taattaaaactagaaatttgataattttttttga	Protospacer
************* *****.*****..... ..*

62. spacer 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 10, identity: 0.73

attgtaaaagatattcgatattgccta-----aatcattcat	CRISPR spacer
attgtaaaacatcttcgatattgcctagtgcgagttg-----	Protospacer
********* ** **************     *.*..     

63. spacer 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 10, identity: 0.73

attgtaaaagatattcgatattgccta-----aatcattcat	CRISPR spacer
attgtaaaacatcttcgatattgcctagtgcgagttg-----	Protospacer
********* ** **************     *.*..     

64. spacer 5.14|2670516|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 10, identity: 0.73

attgtaaaagatattcgatattgccta-----aatcattcat	CRISPR spacer
attgtaaaacatcttcgatattgcctagtgcgagttg-----	Protospacer
********* ** **************     *.*..     

65. spacer 8.30|2710794|37|NC_014721|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017242 (Rhizobium etli 8C-3 plasmid pRsp8C3a, complete sequence) position: , mismatch: 10, identity: 0.73

taagcttctggttctcctcttcaagcttcttgatata	CRISPR spacer
gaagcttctcgttctcctcttcgagctgaacaagatc	Protospacer
 ******** ************.****   ..* ** 

66. spacer 2.19|2498196|36|NC_014721|CRISPRCasFinder matches to NC_024210 (Escherichia phage e4/1c, complete genome) position: , mismatch: 11, identity: 0.694

tcaacaaattaacaccacagcagcaacaacagattg	CRISPR spacer
gcggggaattagcaccacagcaacaacaacagcaac	Protospacer
 *.. .*****.**********.*********    

67. spacer 3.15|2653684|38|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to LR215718 (Staphylococcus phage Stab20 genome assembly, chromosome: I) position: , mismatch: 11, identity: 0.711

tttatgtatgtcaatagttttttaaactttctctacaa	CRISPR spacer
caagtgactgtcaatagttttttaaactttttttattt	Protospacer
.  .**  **********************.*.**.  

68. spacer 3.15|2653684|38|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to LR215718 (Staphylococcus phage Stab20 genome assembly, chromosome: I) position: , mismatch: 11, identity: 0.711

tttatgtatgtcaatagttttttaaactttctctacaa	CRISPR spacer
caagtgactgtcaatagttttttaaactttttttattt	Protospacer
.  .**  **********************.*.**.  

69. spacer 6.19|2690885|37|NC_014721|PILER-CR,CRISPRCasFinder,CRT matches to NC_012036 (Caldicellulosiruptor bescii DSM 6725 plasmid pATHE01, complete sequence) position: , mismatch: 11, identity: 0.703

cacaaaattatagtttggcgcaatcacggtctcctaa	CRISPR spacer
cacaaaattatatttttgcgcaatcaaaaaatgtttg	Protospacer
************ *** ********* ..  * .* .

70. spacer 2.166|2498196|37|NC_014721|CRT matches to NC_024210 (Escherichia phage e4/1c, complete genome) position: , mismatch: 12, identity: 0.676

tcaacaaattaacaccacagcagcaacaacagattgg	CRISPR spacer
gcggggaattagcaccacagcaacaacaacagcaacc	Protospacer
 *.. .*****.**********.*********     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 33870 : 108146 54 Bacillus_phage(20.0%) transposase,tRNA,integrase attL 40151:40210|attR 113267:113669
DBSCAN-SWA_2 572503 : 636432 51 Staphylococcus_prophage(25.0%) transposase,coat,tRNA NA
DBSCAN-SWA_3 731323 : 792050 60 Clostridium_phage(11.11%) integrase,coat,transposase attL 716410:716469|attR 776549:778453
DBSCAN-SWA_4 1486016 : 1498258 11 Synechococcus_phage(22.22%) NA NA
DBSCAN-SWA_5 2101154 : 2109402 9 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_6 2158216 : 2165456 9 Clostridium_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage