CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_014364	Sediminispirochaeta smaragdinae DSM 11293, complete sequence	2 crisprs	WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,csa3,DEDDh,csf3gr5,csf2gr7,csf1gr8	10	9	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_014364_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014364_1

1128272-1133461

TypeI

I-C

Consensus_repeat	Method
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	PILER-CR
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CRT

77 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL

The CRISPR arrays of NC_014364_1

>merge|NC_014364|1|1128272-1133461|PILER-CR,CRISPRCasFinder,CRT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCGGGCGGAGCTTAGCCTCGCCTCGGAGGTTCATAAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTGTTTAAGCTTGTCCTCTTTCTCCGTCTTCTGGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACCAACAGGGAATTGCCGAGGCATGTATGGTACATTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTAAGTATCCCTTTCATGTTTTATCTGGTTTAAGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGAAGAAAAGAAAATGCATGTACTACGACTTATACCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTTATAATGTACCGAGACGTTTTGTCTAACTCCCTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAGTTACTTGTCATATCTCACCTCCAATATAGTTTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGGAACAAGGAACAGGTAAAAGTAAAACACTCCTTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATAATAAAGAACATGCAAGAAAAAGTAACGATAATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATAAATCATAGCCGGACCGTAATCACAACTAACCAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACCGTTTTGATGGCGAGCTGTGGGAGTCCATAGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGAGAAAAATATCAATAAAGCTTCCACCTAATGCACGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCCGCTTTTTAATACCGGGAATTCTTTGACGTCCCAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATAGCAGACCTTATATTTCCCTGAGTAACAGATTCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATCTGTTCATCTAAAAGCCGCTTTACAGACTTCGCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAACAAGGTTATTCCGGAAAGTAAGTATGAGGAATGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGAAAATGCGTTTATTGACCAAGGACCCTCACCTGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGCAAGGCTCGTAGCGGCAAATGTAGACGGGCTGAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATCGGAGGATCCCGTACCCCTGTTATTATTTCCGAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTAGGCAGGCCCATAAGCTGCCAAACATCAAGATTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACCTATTGGTGCTACGCTGGTTAAGTCTGATTTTCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAAGGTGGATCCTATTACAATTGGTGCTTTAACGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCCGCTCGAAACCGCGAGAATGGCACCAGGGTAATAGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTTCCCTGATCTCTCTAAGCCGGTCAATAACCGACTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGGAAACCTTGTACTGAGCTACCCAGTCAGGATATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACTTCTGCCTGGTGTTTTCTCAGCGTCAAAACGAAGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATCCATGAGCGAACAAAACAAGAAAAATTATACGCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCAGCTGCAATCCCAGGGAATTGGTAAACGCTATTGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGCCCCGTTATTATCAACGCCTACTTAATATACCTAGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAGAAAAAAAATCACGATTATAACGAACATAACTATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTTGGAACAGTCTAGCTCCGTGTTCGAGGCTAGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCGGCTAAAGCACCAATTGTAATAGGATCCACCTGTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGCGTCGTTCCTGGCGCAAGGATTATTTTACGAGTGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGATGATCCCCGAAGAGATTCAGCGTGGTCAGAGCGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGATAAGGAGGACTCCGGTGAGTAGACCAAAACTTTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTTTTGTATATAGTCAGCAACATATCTGGCTGAATCAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTTACCATCACTTATGACGATGCTCATTTGCCTGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATTATGCTATTACATAGCTCACAGGCTGTACTATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAATGTCCCGTAACGGGTAGCCCATACCCGTTAATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATTAAATAAATTAAAAAAGGAGCAAGCCTATTCAAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATCTATGCTTTCTAACATTTCTATGAGGGAAGTGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAAGGAGCTTGTTAATCCTACTATAGTGCTAACGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTTTTCAAAAACATCCCTGGCAGCCTCTATTGCTGCTGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAGAAACATTCATGCCTGAATATTAAATCTGTAAAGAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACGGAGGTTTTAGCTTCCTAGAAAAGAATAAATCAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGGCTGATGATCGATGTGTACAGGTTCCATTCGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTGACTGTGACAAGCGACACATCAAAATCCACAATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTGCATCAAGGCAGCTATGCCAGCCTGGCAAAAAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTGATGATCGCAGACAGGGCCATCGAAACATCCATTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGATGACAACCACCCCATTGGCACACTTCTACTGCTTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTCATTCCGGAAGAGGGATTACTTGATCGCTGTCAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGAACCCCGCATGTTAACTGCATTGATCCGGGCCACGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGATAATTCAATGCGATTGTTTTTCCAAACATCTCCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGATCAGCGCCTTGACTGCTTTCATTTCAGACCGGCGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATAATAATATGATGGAATATGTATAAAGGTGTTGTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGGGGGTATCAGTTCCGACTTCCTGATTGGTGATTTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGATTGAATTAGGCGATAGGCTCTACCTTTCAGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGCTATACATACAGGCGTGGAGCAATGGGACAGGCTAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAATTATACTCTATAATTTATAGTATATTGAATAAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACCTCATTAGCCCTTTACTCCATCATTCCAATATCCTAAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAACGAATAGTAACCCCATAAGTCTCTCCATAGTGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGAGCGAATGGTGATCGACGGGAAGATCGCCCACGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTATGCCGATTTCCATTTACTTTGCCCCCTGCATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAATGAGTAGAATGGTATCTATGTCAGCAATAACAACGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGGCTGATGATCGATGTGTACAGGTTCCATTCGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTGACTGTGACAAGCGACACATCAAAATCCACAATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACTGAGACCTTTGAGGGGTACGCAAGAATCTCGAACGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATAGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTATGCCGATTTCCATTTACTTTGCCCCCTGCATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACAATGAGTAGAATGGTATCTATGTCAGCAATAACAACGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACATGGCTGATGATCGATGTGTACAGGTTCCATTCGGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACGTGACTGTGACAAGCGACACATCAAAATCCACAATGTCGCTCCCTTCGCGGGAGCGTGGATTGAAACTCCCGTAGGTTTCTTGCAACGAGGTGGGACGAAGCGTCGCTCCCTTCGCAGGAGCGTGGATTGAAACAGCTTATTAAGCAGTGACTTTATTCTGGAGTCAGGTCGCATCCCTCGCGGGTGCGTGGGGTGCGAC

>NC_014364|1|1|1128272-1133395|PILER-CR
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGGCGGAGCTTAGCCTCGCCTCGGAGGTTCATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGTTTAAGCTTGTCCTCTTTCTCCGTCTTCTGGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCAACAGGGAATTGCCGAGGCATGTATGGTACATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAAGTATCCCTTTCATGTTTTATCTGGTTTAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAGAAAAGAAAATGCATGTACTACGACTTATACC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTATAATGTACCGAGACGTTTTGTCTAACTCCCT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTACTTGTCATATCTCACCTCCAATATAGTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGAACAAGGAACAGGTAAAAGTAAAACACTCCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAAAGAACATGCAAGAAAAAGTAACGATAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAAATCATAGCCGGACCGTAATCACAACTAACCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCGTTTTGATGGCGAGCTGTGGGAGTCCATAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGAAAAATATCAATAAAGCTTCCACCTAATGCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTTTTTAATACCGGGAATTCTTTGACGTCCCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAGCAGACCTTATATTTCCCTGAGTAACAGATTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTGTTCATCTAAAAGCCGCTTTACAGACTTCGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AACAAGGTTATTCCGGAAAGTAAGTATGAGGAATGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAAATGCGTTTATTGACCAAGGACCCTCACCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGCAAGGCTCGTAGCGGCAAATGTAGACGGGCTGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCGGAGGATCCCGTACCCCTGTTATTATTTCCGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAGGCAGGCCCATAAGCTGCCAAACATCAAGATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCTATTGGTGCTACGCTGGTTAAGTCTGATTTTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGTGGATCCTATTACAATTGGTGCTTTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTCGAAACCGCGAGAATGGCACCAGGGTAATAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTCCCTGATCTCTCTAAGCCGGTCAATAACCGACT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGAAACCTTGTACTGAGCTACCCAGTCAGGATAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTTCTGCCTGGTGTTTTCTCAGCGTCAAAACGAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCCATGAGCGAACAAAACAAGAAAAATTATACGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CAGCTGCAATCCCAGGGAATTGGTAAACGCTATTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCCCCGTTATTATCAACGCCTACTTAATATACCTAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAAAAAAATCACGATTATAACGAACATAACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTGGAACAGTCTAGCTCCGTGTTCGAGGCTAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGCTAAAGCACCAATTGTAATAGGATCCACCTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCGTCGTTCCTGGCGCAAGGATTATTTTACGAGTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGATCCCCGAAGAGATTCAGCGTGGTCAGAGCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAAGGAGGACTCCGGTGAGTAGACCAAAACTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTGTATATAGTCAGCAACATATCTGGCTGAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTACCATCACTTATGACGATGCTCATTTGCCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTATGCTATTACATAGCTCACAGGCTGTACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAATGTCCCGTAACGGGTAGCCCATACCCGTTAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTAAATAAATTAAAAAAGGAGCAAGCCTATTCAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTATGCTTTCTAACATTTCTATGAGGGAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGAGCTTGTTAATCCTACTATAGTGCTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTCAAAAACATCCCTGGCAGCCTCTATTGCTGCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAACATTCATGCCTGAATATTAAATCTGTAAAGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGGAGGTTTTAGCTTCCTAGAAAAGAATAAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGCATCAAGGCAGCTATGCCAGCCTGGCAAAAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGATGATCGCAGACAGGGCCATCGAAACATCCATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGACAACCACCCCATTGGCACACTTCTACTGCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCATTCCGGAAGAGGGATTACTTGATCGCTGTCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAACCCCGCATGTTAACTGCATTGATCCGGGCCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAATTCAATGCGATTGTTTTTCCAAACATCTCC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATCAGCGCCTTGACTGCTTTCATTTCAGACCGGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAATATGATGGAATATGTATAAAGGTGTTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGGGGTATCAGTTCCGACTTCCTGATTGGTGATTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGATTGAATTAGGCGATAGGCTCTACCTTTCAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCTATACATACAGGCGTGGAGCAATGGGACAGGCTA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATTATACTCTATAATTTATAGTATATTGAATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CTCATTAGCCCTTTACTCCATCATTCCAATATCCTAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAACGAATAGTAACCCCATAAGTCTCTCCATAGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGCGAATGGTGATCGACGGGAAGATCGCCCACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTGAGACCTTTGAGGGGTACGCAAGAATCTCGAAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCCCGTAGGTTTCTTGCAACGAGGTGGGACGAAGC
GTCGCTCCCTTCGCAGGAGCGTGGATTGAAAC

>NC_014364|1|1|1128272-1133461|CRISPRCasFinder
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGGCGGAGCTTAGCCTCGCCTCGGAGGTTCATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGTTTAAGCTTGTCCTCTTTCTCCGTCTTCTGGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCAACAGGGAATTGCCGAGGCATGTATGGTACATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAAGTATCCCTTTCATGTTTTATCTGGTTTAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAGAAAAGAAAATGCATGTACTACGACTTATACC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTATAATGTACCGAGACGTTTTGTCTAACTCCCT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTACTTGTCATATCTCACCTCCAATATAGTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGAACAAGGAACAGGTAAAAGTAAAACACTCCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAAAGAACATGCAAGAAAAAGTAACGATAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAAATCATAGCCGGACCGTAATCACAACTAACCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCGTTTTGATGGCGAGCTGTGGGAGTCCATAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGAAAAATATCAATAAAGCTTCCACCTAATGCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTTTTTAATACCGGGAATTCTTTGACGTCCCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAGCAGACCTTATATTTCCCTGAGTAACAGATTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTGTTCATCTAAAAGCCGCTTTACAGACTTCGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AACAAGGTTATTCCGGAAAGTAAGTATGAGGAATGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAAATGCGTTTATTGACCAAGGACCCTCACCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGCAAGGCTCGTAGCGGCAAATGTAGACGGGCTGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCGGAGGATCCCGTACCCCTGTTATTATTTCCGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAGGCAGGCCCATAAGCTGCCAAACATCAAGATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCTATTGGTGCTACGCTGGTTAAGTCTGATTTTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGTGGATCCTATTACAATTGGTGCTTTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTCGAAACCGCGAGAATGGCACCAGGGTAATAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTCCCTGATCTCTCTAAGCCGGTCAATAACCGACT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGAAACCTTGTACTGAGCTACCCAGTCAGGATAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTTCTGCCTGGTGTTTTCTCAGCGTCAAAACGAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCCATGAGCGAACAAAACAAGAAAAATTATACGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CAGCTGCAATCCCAGGGAATTGGTAAACGCTATTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCCCCGTTATTATCAACGCCTACTTAATATACCTAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAAAAAAATCACGATTATAACGAACATAACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTGGAACAGTCTAGCTCCGTGTTCGAGGCTAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGCTAAAGCACCAATTGTAATAGGATCCACCTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCGTCGTTCCTGGCGCAAGGATTATTTTACGAGTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGATCCCCGAAGAGATTCAGCGTGGTCAGAGCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAAGGAGGACTCCGGTGAGTAGACCAAAACTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTGTATATAGTCAGCAACATATCTGGCTGAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTACCATCACTTATGACGATGCTCATTTGCCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTATGCTATTACATAGCTCACAGGCTGTACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAATGTCCCGTAACGGGTAGCCCATACCCGTTAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTAAATAAATTAAAAAAGGAGCAAGCCTATTCAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTATGCTTTCTAACATTTCTATGAGGGAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGAGCTTGTTAATCCTACTATAGTGCTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTCAAAAACATCCCTGGCAGCCTCTATTGCTGCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAACATTCATGCCTGAATATTAAATCTGTAAAGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGGAGGTTTTAGCTTCCTAGAAAAGAATAAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGCATCAAGGCAGCTATGCCAGCCTGGCAAAAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGATGATCGCAGACAGGGCCATCGAAACATCCATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGACAACCACCCCATTGGCACACTTCTACTGCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCATTCCGGAAGAGGGATTACTTGATCGCTGTCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAACCCCGCATGTTAACTGCATTGATCCGGGCCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAATTCAATGCGATTGTTTTTCCAAACATCTCC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATCAGCGCCTTGACTGCTTTCATTTCAGACCGGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAATATGATGGAATATGTATAAAGGTGTTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGGGGTATCAGTTCCGACTTCCTGATTGGTGATTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGATTGAATTAGGCGATAGGCTCTACCTTTCAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCTATACATACAGGCGTGGAGCAATGGGACAGGCTA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATTATACTCTATAATTTATAGTATATTGAATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CTCATTAGCCCTTTACTCCATCATTCCAATATCCTAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAACGAATAGTAACCCCATAAGTCTCTCCATAGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGCGAATGGTGATCGACGGGAAGATCGCCCACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTGAGACCTTTGAGGGGTACGCAAGAATCTCGAAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCCCGTAGGTTTCTTGCAACGAGGTGGGACGAAGC
GTCGCTCCCTTCGCAGGAGCGTGGATTGAAAC	AGCTTATTAAGCAGTGACTTTATTCTGGAGTCAG
GTCGCATCCCTCGCGGGTGCGTGGGGTGCGAC

>NC_014364|1|1|1128272-1133461|CRT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGGCGGAGCTTAGCCTCGCCTCGGAGGTTCATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGTTTAAGCTTGTCCTCTTTCTCCGTCTTCTGGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCAACAGGGAATTGCCGAGGCATGTATGGTACATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAAGTATCCCTTTCATGTTTTATCTGGTTTAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAGAAAAGAAAATGCATGTACTACGACTTATACC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTATAATGTACCGAGACGTTTTGTCTAACTCCCT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTACTTGTCATATCTCACCTCCAATATAGTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGAACAAGGAACAGGTAAAAGTAAAACACTCCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAAAGAACATGCAAGAAAAAGTAACGATAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAAATCATAGCCGGACCGTAATCACAACTAACCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCGTTTTGATGGCGAGCTGTGGGAGTCCATAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGAAAAATATCAATAAAGCTTCCACCTAATGCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTTTTTAATACCGGGAATTCTTTGACGTCCCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAGCAGACCTTATATTTCCCTGAGTAACAGATTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTGTTCATCTAAAAGCCGCTTTACAGACTTCGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AACAAGGTTATTCCGGAAAGTAAGTATGAGGAATGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAAAATGCGTTTATTGACCAAGGACCCTCACCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGCAAGGCTCGTAGCGGCAAATGTAGACGGGCTGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCGGAGGATCCCGTACCCCTGTTATTATTTCCGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTAGGCAGGCCCATAAGCTGCCAAACATCAAGATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACCTATTGGTGCTACGCTGGTTAAGTCTGATTTTC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGTGGATCCTATTACAATTGGTGCTTTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CCGCTCGAAACCGCGAGAATGGCACCAGGGTAATAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTCCCTGATCTCTCTAAGCCGGTCAATAACCGACT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGAAACCTTGTACTGAGCTACCCAGTCAGGATAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTTCTGCCTGGTGTTTTCTCAGCGTCAAAACGAAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCCATGAGCGAACAAAACAAGAAAAATTATACGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CAGCTGCAATCCCAGGGAATTGGTAAACGCTATTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCCCCGTTATTATCAACGCCTACTTAATATACCTAG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAAAAAAATCACGATTATAACGAACATAACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTGGAACAGTCTAGCTCCGTGTTCGAGGCTAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CGGCTAAAGCACCAATTGTAATAGGATCCACCTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCGTCGTTCCTGGCGCAAGGATTATTTTACGAGTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGATCCCCGAAGAGATTCAGCGTGGTCAGAGCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAAGGAGGACTCCGGTGAGTAGACCAAAACTTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTGTATATAGTCAGCAACATATCTGGCTGAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTTACCATCACTTATGACGATGCTCATTTGCCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTATGCTATTACATAGCTCACAGGCTGTACTAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAATGTCCCGTAACGGGTAGCCCATACCCGTTAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATTAAATAAATTAAAAAAGGAGCAAGCCTATTCAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATCTATGCTTTCTAACATTTCTATGAGGGAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAAGGAGCTTGTTAATCCTACTATAGTGCTAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TTTTCAAAAACATCCCTGGCAGCCTCTATTGCTGCTG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AGAAACATTCATGCCTGAATATTAAATCTGTAAAGA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGGAGGTTTTAGCTTCCTAGAAAAGAATAAATCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGCATCAAGGCAGCTATGCCAGCCTGGCAAAAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TGATGATCGCAGACAGGGCCATCGAAACATCCATT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATGACAACCACCCCATTGGCACACTTCTACTGCTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCATTCCGGAAGAGGGATTACTTGATCGCTGTCA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAACCCCGCATGTTAACTGCATTGATCCGGGCCAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATAATTCAATGCGATTGTTTTTCCAAACATCTCC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GATCAGCGCCTTGACTGCTTTCATTTCAGACCGGC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATAATAATATGATGGAATATGTATAAAGGTGTTGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GGGGGTATCAGTTCCGACTTCCTGATTGGTGATTT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGATTGAATTAGGCGATAGGCTCTACCTTTCAGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GCTATACATACAGGCGTGGAGCAATGGGACAGGCTA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATTATACTCTATAATTTATAGTATATTGAATAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	CTCATTAGCCCTTTACTCCATCATTCCAATATCCTAA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAACGAATAGTAACCCCATAAGTCTCTCCATAGT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GAGCGAATGGTGATCGACGGGAAGATCGCCCACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACTGAGACCTTTGAGGGGTACGCAAGAATCTCGAAC
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ACGAAAGGTGTCAGAATAACGCCTGCCGTCTGATA
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AAGTTTGCCTGTGCAAACGGGGATTACATCAAGTGG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTATGCCGATTTCCATTTACTTTGCCCCCTGCAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	AATGAGTAGAATGGTATCTATGTCAGCAATAACAACG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	ATGGCTGATGATCGATGTGTACAGGTTCCATTCG
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	GTGACTGTGACAAGCGACACATCAAAATCCACAAT
GTCGCTCCCTTCGCGGGAGCGTGGATTGAAAC	TCCCGTAGGTTTCTTGCAACGAGGTGGGACGAAGC
GTCGCTCCCTTCGCAGGAGCGTGGATTGAAAC	AGCTTATTAAGCAGTGACTTTATTCTGGAGTCAG
GTCGCATCCCTCGCGGGTGCGTGGGGTGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014364.1\|WP_013253672.1\|1127823_1128117_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_014364.1\|WP_013253668.1\|1123462_1125235_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NC_014364.1\|WP_013253679.1\|1139230_1139926_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_013253677.1\|1138285_1138795_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_013253666.1\|1120568_1122794_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NC_014364.1\|WP_171814757.1\|1133765_1133903_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_041866238.1\|1135997_1136543_+\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NC_014364.1\|WP_013253680.1\|1141010_1141499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350227
NC_014364.1\|WP_013253670.1\|1126142_1126787_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NC_014364.1\|WP_013253663.1\|1117621_1119118_+\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271366
NC_014364.1\|WP_013253671.1\|1126786_1127812_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NC_014364.1\|WP_013253676.1\|1137429_1138152_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NC_014364.1\|WP_013253667.1\|1122803_1123466_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NC_014364.1\|WP_013253673.1\|1134536_1135823_+\|esterase-like-activity-of-phytase-family-protein	unknown	unknown	gnl\|CDD\|379191
NC_014364.1\|WP_013253664.1\|1119127_1119229_+\|MetS-family-NSS-transporter-small-subunit	unknown	unknown	unknown
NC_014364.1\|WP_013253681.1\|1141491_1142622_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NC_014364.1\|WP_013253665.1\|1119414_1120425_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NC_014364.1\|WP_013253675.1\|1136539_1137112_+\|chromate-transporter	unknown	unknown	gnl\|CDD\|376780
NC_014364.1\|WP_013253669.1\|1125234_1126101_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NC_014364.1\|WP_013253678.1\|1138807_1139224_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014364.1\|WP_013253672.1\|1127823_1128117_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.19001e-28
NC_014364.1\|WP_013253668.1\|1123462_1125235_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NC_014364.1\|WP_013253666.1\|1120568_1122794_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	8.33387e-56
NC_014364.1\|WP_041866238.1\|1135997_1136543_+\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	2.60788e-43
NC_014364.1\|WP_013253680.1\|1141010_1141499_-\|hypothetical-protein	gnl\|CDD\|350227	cd09879, PIN_VapC_AF0591-like, VapC-like PIN domain of Archaeoglobus fulgidus AF0591 protein and other similar archaeal homologs. PIN (PilT N terminus) domain of Archaeoglobus fulgidus AF0591 protein and other similar uncharacterized archaeal homologs are included in this family. This subgroup belongs to the VapC (virulence-associated protein C)-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. PIN domains within this subgroup contain four of these highly conserved putative metal-binding, active site residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons. Matelska et al. recently classified PIN-like domains and included distant subgroups, this subgroup includes some sequences belonging to one of these, PIN_14.	0.000152729
NC_014364.1\|WP_013253670.1\|1126142_1126787_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.16559e-28
NC_014364.1\|WP_013253663.1\|1117621_1119118_+\|sodium-dependent-transporter	gnl\|CDD\|271366	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter.	0
NC_014364.1\|WP_013253671.1\|1126786_1127812_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NC_014364.1\|WP_013253676.1\|1137429_1138152_-\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.00251134
NC_014364.1\|WP_013253667.1\|1122803_1123466_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.92671e-99
NC_014364.1\|WP_013253673.1\|1134536_1135823_+\|esterase-like-activity-of-phytase-family-protein	gnl\|CDD\|379191	pfam13449, Phytase-like, Esterase-like activity of phytase. This is a repeated domain that carries several highly conserved Glu and Asp residues indicating the likelihood that the domain incorporates the enzymic activity of the PLC-like phospho-diesterase part of the proteins.	7.12552e-55
NC_014364.1\|WP_013253675.1\|1136539_1137112_+\|chromate-transporter	gnl\|CDD\|376780	pfam02417, Chromate_transp, Chromate transporter. Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.	1.86994e-35
NC_014364.1\|WP_013253681.1\|1141491_1142622_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	1.61789e-19
NC_014364.1\|WP_013253665.1\|1119414_1120425_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	7.50194e-20
NC_014364.1\|WP_013253669.1\|1125234_1126101_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.29573e-147

>NC_014364.1|WP_013253672.1|1127823_1128117_+|CRISPR-associated-endonuclease-Cas2
MRVVVSYDVRTDTSEGRRRLRRIAKLCESNGVRVQYSVFECQVDSAEWVKMKDKIVKIINEDEDSVRVYFLGSNWQRKISHIGLKKHFDVVDDTLIL
>NC_014364.1|WP_013253671.1|1126786_1127812_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKRHSNTLYLMTQGTYCHKENDGIVIKVDGERKAKFPVHNIESIVCFGNILCSPFLLGFCAENNISISYLTENGRFLGRFQGNVSGNVLLRRNQYRWADDPEKTGYVARTIIQGKIINSIAVLNRFLRDSKEVNESVKSAVNELKHILGAVEKSNDLEVIRGIEGIAAKCYFNVFNNLIKQQKDDFVFNGRNKRPPRDEVNALLSFIYVVMMHDIRSALETVGLDPAVGYLHRDRSGRYSLALDLMEEFRSFFADRLILSLINRNQIKKSHFRLTEAKSVLLNDEGKKILLTAYQDRKKEEILHPFINEKCTYGRLFFIQALIFARWVRGDIDGYPPFIWK
>NC_014364.1|WP_013253670.1|1126142_1126787_+|CRISPR-associated-protein-Cas4
MYTEDDFIQLSAIQHYRFCKRQFYLAYVEEIWIENFLTASGRIMHQHVDDVHREKRKGLSQEFGLALCSYELGVSGKADVIEFYHDQDGELVEIIPVEYKRGIEKEDNCDAMQLCAQAICLEEMTGLSIEHGFLFYGKERRRTEITFSQELREETKTAFLDIHSLYNEFSEPPKAIFNQNCKACSFFEYCKPKTVGKRKSAKSYFQKIIREVKP
>NC_014364.1|WP_013253669.1|1125234_1126101_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MEAIKNRYEFVLLFDVENGNPNGDPDAGNLPRIDAETSKGIVTDVCLKRKIRNYIEIKHGHEAGYHIYVKEKGVLNAQHELAYKALGLKPEPKKLPKDEAKARELTEWMCTNFFDIRTFGAVMTTEINCGQVKGPVQLNLAKSIDPVMPSELSITRMAVTKEADKEKERTIGKKTLIPYGLYRVEGYISAHFAERTGFNETDLNELWDAFKNMFDHDRSASRGKMSPQKLIVFKHDSALGNAPAHKLFDLVDIKRIGNTDQPPRSFQDYEVVMNDNPFNGVTIQTLLD
>NC_014364.1|WP_013253668.1|1123462_1125235_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQELSKYYKRLLEDPQIDICEPGFSPENISFRIVISKDGDFINLEDLREPDEKNNLRPTIMNVPKFDGKRARGIKPYFLWDKSHYTVGIKSENSIEEETLEHKNAFILLIDEIMGDSLSDYSSIVAIRKFSSNKDNIAKLKAHTHWNDFLNNFAVFEVEGSGFQTVFDDPQILEIWRKHYAKSATGKEMQQGLCLVSGEKGSLTTTHPTIKRGIGGKNDVPLVSCNIDSGESYNKTKGENAPVSSISASYFTGALNYLVDHNTNNILLGDTRGGDRLLFWAEENKESESFFGSVFDNQKRDESKLKELEATFKIIRKGQYPDELDDDSHFFVLGLAPNSARVSVRFWHVDTVKSMVTKIGRHVEDLQIIKMFPERETNIPSIWQLLIETAVLRDSKNILPTLAGPLMRSVLSGNRYPNNILALLIGRIRHDQDDKKKGKWKISSYRASFIKAILNRNYNKELSVALDKEKTSVPYCLGRLFAVLEKIQEDSADGEINTTIKDRYFSSASATPKVVFPTILKLSQNHQKKLRTKSPGNMINKEKLLGEIMGNISEFPATLKLEDQGEFAIGYYHQRQNFFTKKENKGDN
>NC_014364.1|WP_013253667.1|1122803_1123466_+|type-I-C-CRISPR-associated-protein-Cas5
MNYGIKLLVRGDYALFTRPELKVERVSYDVMTPSAARAIVEAIYWKPAIRWIIDSILVLNPVKFDNLRRNEVKSKIAEQSISAAMKTNSAICLYADDSDIRQQRAATLLRDVAYIIEAHFEYVPGMGDENDGKHLEIFNRRLENGQCFAQPYLGTREFSCSFEPVKEKYTSQLEGERDLGIMLFDLDFSDKKNPQPLFFRAKMSDGLMLVPHPDSEEVLR
>NC_014364.1|WP_013253666.1|1120568_1122794_+|CRISPR-associated-helicase/endonuclease-Cas3
MGKELLAHVKQNDDKEWQIHTLEDHLKGVAVLSAKFTSCFGLEKLAFIQGLTHDAGKASDDFQQKIAGKSGYDSDAHVSTAVDHSTAGAQYVIEKYGEGAIPLAYSIMGHHGGLPNGYDENDSCLEKRLEKEVSEYKTNLPDENLPDTILPSDYLPKKSLKPPKVHFLIRMLYSALTDADFLDTERFMSPEKESLRNDGSVNFIQLKELLDNDLSAYTDRSGINGTRADILDWCRKAANLPQGIYSLTVPTGGGKTKSSVSFAIEHCIRHELKRIIYVIPYTSIISQNAGVFRGIFGVDNVLEHHSNLEPEHENARNRLLCENWDAPIVVTTNIQFFESFYSSRSSSCRKLHNVADSVIIFDEAQMLPSEFLKPCLEIISELVDNYGCTAVLCTATQPTLNKERFLKDSALKNVTEIIPEPETLYQSLKRVEIEYLNEPLSNEDISTRVLPLRQVLIIVNTRRDARKIFEFMLQNHQDDGSIFHLSTFMCPKHREQTLKIIRERLSQNMPCKVVSTQLIEAGVDIDFSVVYRAIAGLDSIAQAAGRCNREGKLEYGKVFVFKGENPPPPGHLRQSAESGEKTLQSFQKDPLCLDAIASYFDDFFWKRAGAHGMDKKNIASRLNVHPNEIDKIPFKDVAKDFSIINQPTKAIIIPFEQEGELLVERLQNKYYFPNRDDYKKAQRLSVQVMDKVLDLLVGLGAVVDARGDGQFYILSNTDIYSKHTGLSTDDPQFIESEKLVF
>NC_014364.1|WP_013253665.1|1119414_1120425_+|WYL-domain-containing-protein
MSRSLRFPQIEQLLLDHPEGLHRADIARRLGVHKSTIGRDITLLTSQLPLIEEADGRIRLDRHGYLHTIHLTMHELEALHLSARLFSKVMRFPFPHASAALRKLADAQGRVSPALAARIRDTAEELDEFISASSGDYAAYRKVIEELGIAISEMRPVKISHFSREKQSTRQFHLFPVTLEPHPEGKAVHLIGWDLDAEEPFFRTIKTERIDSVILEASDPDLFACIPTERMMEGLRNAWSIWSTDAPPIPVRLCFSSVVADRVAETQWHSSQNLDYLPDGRLIWSALIAEPKEMYPWIRGWGPDVEILEPEDLRLRHRSDLERGVALYAEKGTTDV
>NC_014364.1|WP_013253664.1|1119127_1119229_+|MetS-family-NSS-transporter-small-subunit
MSIGAIIFMIFGLLLTWGGAAVCISIALRKRDL
>NC_014364.1|WP_013253663.1|1117621_1119118_+|sodium-dependent-transporter
MKRETWGSRAGFILAAVGSAIGLGNIWRFPYMAFENGGGAFLIPYFFALVTAGIPILILEFSLGHKMKGSAPFTFAKLNRKWEWLGWWQVFISFVIAVYYVVIVGWAISYVGYSFTLAWGDKTVAFFTGDFLGLTDSPFHLGGFRWGIVAATLFAWLVSFVVLYAGVKSGIEKANKIFMPLLIVILLIVMVRGVTLPGAADGLERLFRPDFSKMLSGRVWIAAYGQIFFSLSIAFAIMLTYASYLPEKSDIVNNAFMTGLLNCGFSILSGITVFSIIGFMTQQAGGQLPEKLSGVFLAFATIPQAINQLPTMSVLVGVLFFLSLTFAGLSSFISINEVLVSSFADKLNLPRKKVVVGYTLIAGLVSLVFTTGAGLYILDIVDHWVNNFGVVLSGLTELIFIGWICKLITLREHFEPVSDFKVGMWWELTVKFVTPFVLAVTAVQGFIQEFTSPYGGYQLGPLIAYGWAVVLLIVILGVVFGKTKWADPGAFATSKAQS
>NC_014364.1|WP_171814757.1|1133765_1133903_+|hypothetical-protein
MAILAIDYSLSTLSSTTISLKSHYEVREEDDLDSVTITRGRVRRG
>NC_014364.1|WP_013253673.1|1134536_1135823_+|esterase-like-activity-of-phytase-family-protein
MKKACSLGLVAVLLLSLAACTSVDVSKVPAAGSRLPYTVLTTLPNGTEVRNGGYGSAMTGHPAKAGRFYAITDRGPNSSYTGSAGKGKKFPVPDYTPRIGEFKLNADGSVSMIREILLKDPQGTLISGRPNPEGLGATGEVAYDNDGNALAADPYGLDSEGLVALSDGTFWISDEYGPHIVHYSADGVELERISPMGIDTSGRKLPRVFARRRANRGMEGLAITPDEKTLVGIMQSTLYNPSKKAATNTTLARIVTFDLDTGETHQYLYHQEKNNNSDSELAALTATTFLVDERDGAFSGEGDAQKTLYKIDLSGATDVSGDIDAAGGMTVDGRTLEEMSWDDIYAAGIKPVKKELVADVVAMLPNHYPHDKLEGLWVIDATTVGILNDDDFAVTPQGDDVVQKILPGTANEIDGDVLYILHLAKPLF
>NC_014364.1|WP_041866238.1|1135997_1136543_+|chromate-transporter
MNTYLDLFFTFARIGGLTFGGGYAMLPILQREVVEKRRWVTDEELMDYYAVGQCTPGIIAINTATFIGNRRKGASGGIVATLGMIFPSLIIITLIAAFISNFADLAVVKNAFAGIRVCVFVLILQAIWKLQKRALIDRATGIIFALVFLLSVFTGLSPILFVLLSGLAGIIIQGKKAGGKG
>NC_014364.1|WP_013253675.1|1136539_1137112_+|chromate-transporter
MILLQLFFEYFKVGLFAVGGGLATLPFLYAMSDSTGWFTHTQLADMLAVSESTPGPIGVNMATYVGFTTAGIPGTIAATLGLVTPSVIIIIVVAHFLKAFSGNPLVQGAFYGLRPASVGLIAAAGWVVLKISLLDIPLFRESGELLRLFRWKGLVLALVIFAILKLWKIHPVFVIALSAVVGAVFRFAGA
>NC_014364.1|WP_013253676.1|1137429_1138152_-|VCBS-repeat-containing-protein
MIKTIINWPAQIRDGDKNDVLYGTLSVTERQKKGDSMKLPLPTKSGTAHSAPFFLAAAALLFAIGCSNPTNSSEADHTGQTSLSFIDAQANLKGLSRNPSCSIADVDNDGDIDILIAGYDGSDETTILYLNDGNGGFTDSHAGLLGVSFAMSAFLDVEGGSDLDLCLAGRTADDETITELYFNDGDGTFEKSSQQLKGLWAAAIIPGDPDDDGDGDEDLILCGADTNVSGKTILYLNGRF
>NC_014364.1|WP_013253677.1|1138285_1138795_+|hypothetical-protein
MRDYPVGSAVFLAVLSIFALFAGFFLVLTGGGDVRLPTLVLWALLGVVSESLSVHNSRGNIYISTTEAVVFGAYITGGTVTGLVTICASLLLWVEIRDGKMRNLFTTPFRLTLFNSTHFIVGLSIVDLVYRFLVSFSGGNHGCDLSPFWTPFVSVFLHADYRRSYYSCG
>NC_014364.1|WP_013253678.1|1138807_1139224_+|hypothetical-protein
MVPIAFLLLLSLYVAFPAFYGTLLYLFPAPMLALSFVVVYRFSRRQDVARLASGIALLLILLFSYTIILLALKLYLIQHSVIPLSPHEIVFNIYEGLNYLPALLFLLYLRSSSENRLCVIPSGVWFKNEEISSSFTSM
>NC_014364.1|WP_013253679.1|1139230_1139926_+|hypothetical-protein
MLSLLVKRILPFGISLAVLLLLSFSTVPLVGELGALFLALKNSIFMAILFLLVPSTHFDFQRFRKRSANIMFWLIWFYMAVLTAFDPSLLSTQELFLNSTFGELFSMLIDRFFLFFVLVFSVGFYSLGNKILEIEGDSICFNGRELSGTLSGHNRAILSAFIGNPGRVLRCSDILKLLSPGQLDECTIECKPSLCKEYQRIYKRIRTIRRYLETTGIGTYHHKSRMAAASA
>NC_014364.1|WP_013253680.1|1141010_1141499_-|hypothetical-protein
MNNHKLSLSIIDANILIDYVLADEDIIRELSNYWKEVLVPDCVINEVDGLTLDRAAELGLVIVETPFSELKEDPVLSYQDLSCFYYTKKHFAVCLTNDKALRRACKSNGLDTIWGLEMLLLLVSNSQIKKARAKGIAEKIHKNNPEITGNILKDFLINLQNI
>NC_014364.1|WP_013253681.1|1141491_1142622_-|ImmA/IrrE-family-metallo-endopeptidase
MAIEDIGANIRRIMKIKGYSIAKLSARMGVGTATISNILNGRSEPKSSTLLKFCNALEVGLPDILADAPKLQSLRFRTNSNLSAREKAERDQMLYETAQWLKNYNTLEDLLNVKPEYGFKDLGEADPIRLANIVREKLGLTDSQPIVDLPAEIEKAGIKLYLHSFGFKKTFGLSVADIDMGPAIVVNSEKDISIERRIFTIAHELGHLLMHRGSYNGEETVEDKGSAQEKEADLFAGEFLLPTSALKREWSEAIGLDLVDRVLKIKKIYRVSYQVVLMRLSQLNPQFESPQIYIRFNTEFQEKYHHNLKNHYEPEAIEEPEPLSDFDLIEDHYAALVLKAYSAGGISMSKAGEMLGKSTMQMRKFLSAWKEIELNE

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Crispr_ID: NC_014364_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_014364_2

1713837-1713997

Orphan

Consensus_repeat	Method
GCTGTACCGCTTGCGGCTGTGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_014364_2

>merge|NC_014364|2|1713837-1713997|CRISPRCasFinder
GCTGTACCGCTTGCGGCTGTGACGGCATCTGAGGCTGCGTGGGCCACGGTGGCGGCTGCATCTGTTGCTGCACCGCTTGCGGCTGTGACCGCCTCGGTGGCAGTCTGAGCAGCCTGCGTTCCTGCCTCTGCAGCGGAAGCGGCACTGGTTGCGTCTGTAAC

>NC_014364|2|2|1713837-1713997|CRISPRCasFinder
GCTGTACCGCTTGCGGCTGTGAC	GGCATCTGAGGCTGCGTGGGCCACGGTGGCGGCTGCATCTGTT
GCTGCACCGCTTGCGGCTGTGAC	CGCCTCGGTGGCAGTCTGAGCAGCCTGCGTTCCTGCCTCTGCAGCGGAA
GCGGCACTGGTTGCGTCTGTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_014364.1\|WP_013254193.1\|1717416_1718016_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_013254199.1\|1723447_1725124_+\|citramalate-synthase	unknown	unknown	gnl\|CDD\|237068
NC_014364.1\|WP_083771464.1\|1710449_1712360_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NC_014364.1\|WP_013254184.1\|1707174_1708860_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NC_014364.1\|WP_013254183.1\|1705162_1707151_+\|Hpt-domain-containing-protein	unknown	unknown	gnl\|CDD\|223716
NC_014364.1\|WP_013254182.1\|1704526_1705159_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|99751
NC_014364.1\|WP_013254185.1\|1708862_1709795_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238572
NC_014364.1\|WP_148224155.1\|1716882_1717395_+\|Gx-transporter-family-protein	unknown	unknown	gnl\|CDD\|227110
NC_014364.1\|WP_013254197.1\|1720634_1721645_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NC_014364.1\|WP_148224047.1\|1715676_1716618_+\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|224394
NC_014364.1\|WP_041866016.1\|1718370_1720053_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NC_014364.1\|WP_171814761.1\|1710119_1710383_-\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NC_014364.1\|WP_013254180.1\|1702319_1702874_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_013254186.1\|1709757_1710123_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380350
NC_014364.1\|WP_013254196.1\|1720073_1720583_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NC_014364.1\|WP_013254198.1\|1721711_1723451_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
NC_014364.1\|WP_013254181.1\|1702857_1704534_+\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|234715
NC_014364.1\|WP_013254191.1\|1716614_1716893_+\|hypothetical-protein	unknown	unknown	unknown
NC_014364.1\|WP_013254188.1\|1712356_1713325_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NC_014364.1\|WP_013254194.1\|1718076_1718241_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_014364.1\|WP_013254199.1\|1723447_1725124_+\|citramalate-synthase	gnl\|CDD\|237068	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional.	0
NC_014364.1\|WP_013254197.1\|1720634_1721645_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NC_014364.1\|WP_083771464.1\|1710449_1712360_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.19353e-37
NC_014364.1\|WP_013254184.1\|1707174_1708860_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NC_014364.1\|WP_013254183.1\|1705162_1707151_+\|Hpt-domain-containing-protein	gnl\|CDD\|223716	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms].	1.46283e-71
NC_014364.1\|WP_013254182.1\|1704526_1705159_+\|DnaJ-domain-containing-protein	gnl\|CDD\|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	3.18264e-19
NC_014364.1\|WP_148224155.1\|1716882_1717395_+\|Gx-transporter-family-protein	gnl\|CDD\|227110	COG4769, COG4769, Predicted membrane protein [Function unknown].	7.52028e-32
NC_014364.1\|WP_013254181.1\|1702857_1704534_+\|Hsp70-family-protein	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NC_014364.1\|WP_148224047.1\|1715676_1716618_+\|FAD:protein-FMN-transferase	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	2.04952e-107
NC_014364.1\|WP_041866016.1\|1718370_1720053_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NC_014364.1\|WP_171814761.1\|1710119_1710383_-\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	5.60517e-24
NC_014364.1\|WP_013254186.1\|1709757_1710123_-\|cupin-domain-containing-protein	gnl\|CDD\|380350	cd02221, cupin_TM1287-like, Thermotoga maritima TM1287 decarboxylase, cupin domain. This family includes bacterial proteins homologous to TM1287 decarboxylase, a Thermotoga maritima manganese-containing cupin thought to catalyze the conversion of oxalate to formate and carbon dioxide, due to its similarity to oxalate decarboxylase (OXDC) from Bacillus subtilis. TM1287 shows a cupin fold with a conserved "jelly roll-like" beta-barrel fold and forms a homodimer.	1.47369e-37
NC_014364.1\|WP_013254196.1\|1720073_1720583_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	6.5699e-74
NC_014364.1\|WP_013254198.1\|1721711_1723451_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NC_014364.1\|WP_013254185.1\|1708862_1709795_+\|carbohydrate-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	2.33645e-61
NC_014364.1\|WP_013254188.1\|1712356_1713325_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	6.8248e-82

>NC_014364.1|WP_013254188.1|1712356_1713325_-|polyprenyl-synthetase-family-protein
MKQSVLGIPSLDSDLLRVREVILTHIRNSSPTIREGLEELILAQGKMLRPSFLLLTARCGKFSKKKAYDIAAAIEMLHIATLIHDDVIDDADTRRGVPAVHTKIGIRKAILMGDYLFSRCFSIAAQYATIENGRSLSTAVGFICQSEIDQSTKEYDFAISRRTYLRRIAGKTAALFLLSFHAGASQSKMNKTQVMWARRAGYAIGMAFQIIDDILDYTGSKEVLGKPAGSDLRQGVCTLPLIIARETKQSEEISALIQRLPNDPGVVDALLSIVEGSGALATAREEAQCYTDRAIEALDHLPANQAREQLLALTRTVLARSY
>NC_014364.1|WP_083771464.1|1710449_1712360_+|HAMP-domain-containing-protein
MFRILVFLSPKHTREDSQSVEATRIPDTIYYKEKVRYYYFMKVRSKLLLLNVVFLVGFLCAGFVLTLSIRTLMSEYHIGLEGTSLIGELHELSNLTKEILLAEDLHDTLPEVIAQVRRVDDRIETYLTESVKTAPRETKDVLEIYDVTKRQLESVLAKVEEIEKRYPDYLPGLVEAYSYYQVFTIDRAAKEVLQLSTYLSETLTVRLKALVDEVSRQNARLASSAIRFSIIVSAIILFILTFFSLLTIRGLDRRIGEFRRQLLRFETGDISSDVVLTGRDEFSAIAEAMNQFIILLRELLYDVRKIIFAHHESQKETIGIIETSDRVREEAIAGVKTAEDEAEQLHTMVSAGESELKELRKGFSDLSMKLSSQNTSISESSAAVEEMNASIASATRIARERQEASGRLAVSTQKGHTMLEATGKMVSDTVSDMEKIKDIVTIINDISEKTNLLSMNAAIQASHAGEAGKGFAVLAGEIRRLADSTGENARMIQEAIETAAKRSVEMNQGAVNTLQLFREILAESDRAQSSMSEIVGAMEEILSGSGEITRAILSIRDTSVEMDERSAEMDNASLKVSKTIGRVGGHASTMENATTDLGKAVLSMGERVTQLGEAGRNTAAVIASLAEKIGRFRLED
>NC_014364.1|WP_171814761.1|1710119_1710383_-|HPr-family-phosphocarrier-protein
MIQNKAGIHVRPSGVIMNEVSPYEGKVILKKEDVEVELTSIMALLSLGLVQGDKITIHIEGPDENKKAEKLVELFQHNFDYPGRESG
>NC_014364.1|WP_013254186.1|1709757_1710123_-|cupin-domain-containing-protein
MIIRQTSMRNEVKEHMRDGEGNIALRHLLSPEQVPGGRLFSELTLVPGSSIGEHTHTGETEYYYILEGTGEVDEGTGPIAIAAGDLVVTGNGESHSIRNNGNTPLRLIALILFDRENLSSQ
>NC_014364.1|WP_013254185.1|1708862_1709795_+|carbohydrate-kinase
MEKRDTIHALAFGEILWDIIDNEPHIGGAPFNLAAHMAALGGEVSIASAVGKDRLGSAALEEVKHLGIDNSFINIHPQLATGTVPVSLDAQGKPEYEIVENVAWDAITLSDAALEAISKRNWDLFVFGTLAQRSKENRQVLRELVDHSNAGERFFDVNLRLSYYSAKILHDSLMLTTILKLNDEEVPIVSDALFSRTMREEEFCKAIFDTFPVRMICITKGKDGSTLFDGKMRYDEPIVDIPVVDTVGAGDSFSAAFLTAYLKGLTKAKALRFASRLSSFVAGSSGAVPAYTGWILDDITAMKDSPDRRE
>NC_014364.1|WP_013254184.1|1707174_1708860_+|energy-dependent-translational-throttle-protein-EttA
MADDDRKIIYSMVGVSKRHGTKTILDSISLSYFYGAKIGVLGLNGAGKSSLLKILAGADKDFDGRTILAPGFSIGYLEQEPRLRKGASVREIVEEGVQELVALLAEYDAINESFAEPMDDTQMEKVLARLGEVQEALDHLDAWNLDSRLELAMDALRCPPPDQIVDSLSGGERRRIALCRLLLQKPDILLLDEPTNHLDAETVAWLEHHLQTYSGTVIAVTHDRYFLDNVAGWILELDRGKGIPWKGNYSSWLEQKNRRLATEEKQETSRRKTLERELEWIKMAPKGRHAKGKARVNAYESLLSQESTQQDRDLQIYIPPGPRLGSLVVEARTVSKAYGENILVEDMSFSVPPGAIVGIIGPNGAGKTTLFRMMTGSEVPDSGRLRIGESVRLAYVEQTRASLDPEKSVWEQISGGEDEILLGKRSVNSRAYVAQFNFLGADQQKKLQTLSGGERNRVQLAMILKSGANLLLLDEPTNDLDVNTMRALEEGLLGFGGSVMVVSHDRWFLDRIASHILAFEGESKVFWFEGNYSEYAADRRRRLGDDALIPHRIKFRKLTRD
>NC_014364.1|WP_013254183.1|1705162_1707151_+|Hpt-domain-containing-protein
MQSGDRLYTTFLDDGKAFSQNIHHLLLKLSSRPNSVEFLRQLLRNAHSLKSEAAYIGIDEVTSIAHQMETTINLALTGKELLSSRKVDDLIFSNDRIGEILDFLLSGGDSKETISVEGTKDSETSPAHALSDGGLLSGLKERDGTSIPSIVGTALPDFSPFETNLLKEARRRGEGLYRLFLNISRDAAMPFAKAYLLLSNLEQVSNVIRTIPLFRPDQDISANGDDFRSLTIFLTSKGAVKQLYQAVHIDQVDSISLTPVSYAAVLESEGEEDEGVHGDVSATIRVEPRLLNLLAGYIDELKLSLHQLERRIDRRKEEPEAVASNLAELGNLIEGLESVGKTLSKVRLSELFAGYPGYVAEMAQRLGKKVRLVLSGGELDVDRRIAELLGETILHLLRNGVDHGIEFPGERLKAGKDEEGTIRLDVHRGAGGLSLSVSDDGRGIDKEKLSARLGEDLTLEGDAEGTDGGRANKLAALLARPGITTKDEATDLSGRGFGLDIVYRKIGRIEGAYLEAESEDGKGTRFTITIPGGASFITLKMVRCEQLVLAVPERSILSVEEASDGTFGGDAEGRLEWNGIPVFSPDGRLFRTDRLPPQELVLIMQHLDRKGAFLVDELLFTREVPEEQFTLFVEESPFLYRSSIGGRKSGFLYLSPSVVAIN
>NC_014364.1|WP_013254182.1|1704526_1705159_+|DnaJ-domain-containing-protein
MDDSRLYQILGLRRGASQEEIKSAYRRLVKQLHPDLSHTPATSEQFKRVVRAYKVLSVRQVDGSCIQFPGGGRKRPSTRAHAKKEINTDALGRMVTEAKVPELRAFAVKQLGNSGKRSSYQFIRKALFDPAPLVVRSAVDAVGKLGVRQCAGELSAVFSRSDQEIRLAVLDAVGRIGGGGFSTIINLAMQDGNRAVRNRAVTLFVAGKGA
>NC_014364.1|WP_013254181.1|1702857_1704534_+|Hsp70-family-protein
MVIGIDLGTTNSAAAFLEQEQPTIIPNDRGNRITPSIVAVTGSGELLVGEAAKNQAMINPGGTATAVKRSMGSTSPLKLGNREMLPEVVSAEILRKLKSDAEAYLGEEIKEAVITVPAYFTEPQRRKTKEAGHLAGLRISRIINEPTAAALAYASSCGKSRNIMVYDLGGGTFDVTILSSSDGHFRVLSSCGDNKLGGIDFDQLLFQEVVRDFSRRAPSVDFEGDPTLRQQLMEQVERAKIELSSRESASISLPFIGGGTSPLHLAFEISRNRFNELIRPFIEKTVSLCRQAMDDAKVRPDTLILSGGSSRIPLVRSLLGELTGLRPENRINPEEVVALGAAVHAGMIQDGRKSLFHDVTPLPLGVEIEGGNVVTILEKNSPLPAVGKQHFTTICDGQRSVEIHVLQGNSKRVEANTSLGRFLLGGIRNGCKGEPLIEVSFRVDEDGILHALARDVDTGSLQHVTISREPNPPTVSGNFETGVRDKVLHLVDRVKQERRRAGSGIDSSFEKEISEILVAATEACAGNGGKDLNSCRIALETVLGEIEAILRDQELKYG
>NC_014364.1|WP_013254180.1|1702319_1702874_+|hypothetical-protein
MLVTAVALSVAINIILMAFAYIRLSKEIGRRRKSDSLLREIREEAEEIVREINQVTDRNVGLIEDSIRRLTEKLSDADKRITLLGKAAENKEKERITYSHLRHPLPEVQNPLPDFDQMRGDQKEIPAKQKQETLPPLRERVLEMSRNGFSSQVIAQKTGATVGEVELMINLSGGREEVEHGNRY
>NC_014364.1|WP_148224047.1|1715676_1716618_+|FAD:protein-FMN-transferase
MGTTCTITVFRKADAHHIQEAFDAVHRVESLMSVNLDDSEISVLNDHAGRDPLQFSDDTFFLLSKAKEYAQLSGGAFDPTVGPLVSLWGIGSDEARLPERSEILDALALIDYHNLVLNSEHRTAELLKKGMAVDLGAIAKGYAADAAAQVLKDDEVPYAIINFGGNVFAMGQRYGDGPWKIGIQDPDAERGNYIAIARVEDSAVVTSGKYERFFIQDGVRYHHILSTVDGYPIENGIASVTVVARDSTLADAFSTMLFALGPEKGLRLARETPFLQAVFVMEDKSVLTSSDPDGWLTIEDSRYHFVQDSEVTE
>NC_014364.1|WP_013254191.1|1716614_1716893_+|hypothetical-protein
MSKFDDVRLISGVWYRLDLSMGKSFTACCIMEESDEGVITFFEFPDESRKAAADILPHLVDLVPIEPPAEISYRIEDFLDDEDEVDGESDEW
>NC_014364.1|WP_148224155.1|1716882_1717395_+|Gx-transporter-family-protein
MSGDRHKPVAVLGGLALFLSVLEFMIPKPVPFMRLGIANIPILIALALFDDREVWLLAFLKIAGQGIVNGTLFSYIILFSATGTLVSVAVMVLLRRFARKGISLVGMSVAGAFVGNLSQIVLANRFIFGNAALLIAPPFLIIGLISGAIMGFFGDRFIAGSLWARNFTEA
>NC_014364.1|WP_013254193.1|1717416_1718016_+|hypothetical-protein
MAGVLLIPAFVFQQSLLFRIIQVVLLIVYSLLLGRRFRFLPNIALLLGVTVANLLTPVGEVLFRIGTFPVTSVALVQGLMRALLFIGLVYLSRSSISASLALPGKGGALVARTLYYFEKIINFDPPAKEKGFWYALTHLGKRLDQILLFCFQEADESPADTLAGKRGEAVVPLIGIRIYIVVLILLFWTLFVISQVIKA
>NC_014364.1|WP_013254194.1|1718076_1718241_+|hypothetical-protein
MFTIIARSINLIVPVMSIIIIVNILLSSLPISIIILSIIGKFRRSSMAAGNRAC
>NC_014364.1|WP_041866016.1|1718370_1720053_+|biosynthetic-type-acetolactate-synthase-large-subunit
MILKGARILVESLLLEGVDTIFAYTGGKVISIFDQLQEFEDRVRLILPRHEQGGAHAADGYARSTGRPGVVIVTSGPGATNTVTGIATAYMDSVPMVVITGQVNLDQIGSDAFQEADVVGITMPITKANFLVRDASEIAYTVKKAFHLATTGRPGPVVIDIPGDVQAQDVPFAYPDTIELRGYKPNMNGHPKQIKSVIGMLKQSRKPLIIAGGGVNLSGATEMVNRLADEKGIPVVCTLMGHGVMPKRSELLLGPIGMHGTLYGNYAVQNADLILALGVRFSDRIVGDGAGFAPKAKLVHVDIDPAEIGKSIKADLPIVGTIQSVLGDLNKADIPVDSEQWIRELVEYRSAHPLVAEDPKNPGGLAPQRLIQLAGEIFPKETIVVTDVGQNQMWAALFFGFSRGRSFLTSGGLGTMGFGLPAAIGAAVGNPDKPVLMISGDGGFQMNLQELATIRRYRLPVKMLVIDNGYLGMVRQWQELLFEKRYAGTVMDDNPDFAALAEVFGIHGRTLWDAKDAQDVLRELAECEGPMLLHAHVSPSANVLPMVPAGKPLEQVVEKI
>NC_014364.1|WP_013254196.1|1720073_1720583_+|acetolactate-synthase-small-subunit
MREEEYTDHTISVLVNNHPGVLSKLTSLITRRGFNIESIAAGPTKDPDMFRLTIIVKGDDQSVEQIQKQLYKIVDTVKVSPIDPRNKVEREIGLIKLRATNGSRNEVLQMVNVFKGQVIDSGPGGFVVEIVGSSEKVDSFIGLFPPQQVVEVARTGIVAMNRWEKKQTR
>NC_014364.1|WP_013254197.1|1720634_1721645_+|ketol-acid-reductoisomerase
MAKIFYDKDADLSALKNETVAVLGFGSQGHAHAMSLKDSGVDVIVGLRKGSKSWKKAEAYGIPVYTVAEAAKRGSVVMVLLPDELQAEIYAKEIAPGLEAGNMLMFAHGFAIHFHQIVAPKGVDVSLVAPKGPGHIVRREFEAGRGVPGLVAVHKDETGKAEARALAYAKGIGCTRAGVFETSFREETETDLFGEQAVLCGGVTSLMKAGFDTLVEAGYQPEMAYFECINEMKLIVDLIYEGGMTLMRHSISNTAEYGDYITQGKLVTDETKKAMKGILEDIQSGRFARDWILENRAGRPSFYAMRQNARNSQNEAVGAQLRSMMSWLKSDIEIEE
>NC_014364.1|WP_013254198.1|1721711_1723451_+|dihydroxy-acid-dehydratase
MRSDKMKLGSKRAPHRSLMKALGLTDREIAGPIIGIASSASELIPGHMHLAQVEDAVKAGVRMAGATPLRFSTIGVCDGIAMDHKGMYYSLPSRELIADSIEIVAEGHPFDGMVFISNCDKITPGMLMAMGRLNIPSVLISGGPMLAGNYHGKSLDLISVFEAVGRHAQGNIDDDELAAIESYACPGAGSCSGLFTANSMNSLAEVLGLALPGNGTIPAVDSGRIRLAKEAGMAVVRLVKEDICPRNIATEDSFMNAVAADLALGGSSNTALHLPAIAKAFDVDFSIDNFDLLGRRIPHLCNLSPVGKHHIQDLEAAGGIGAILSRLNELGELKRDARSVTGKTIGEIADASRVWDDEVVRPVGRPYHSEGGLAVLHGSLAPDGAVVKLAGVPEALRVHEGPAVVYEDGEVATEAILAGKVKSGDVVVIRNEGPKGGPGMREMLSPTSAIVGLGLIEKVVLITDGRFSGGSTGAVIGHVSPEAANGGPIGLVQEGDRIRVDFNKRSLDLLVEEDEKKRRAGALAEASAEKPVAAKHNPDGYLARYSIFVGSAAEGAIYRKDFVEAASESVKRLQSGETS
>NC_014364.1|WP_013254199.1|1723447_1725124_+|citramalate-synthase
MSNASREKIMIFDTTLRDGAQTRGVAFSVEDKIRIARGLDQLGVDFIEGGWPGSNPKDVAFFHEMKKAPLSRASLTAFSSTRMKNMAVEEDANIRTLCETGVPAVAIFGKSWDLHVTEALETSLDENLAMVSSTISYLRGRFEKIIFDAEHYFDGFKADRGYALAVIEAAASAGADWIALCDTNGGSLPSEILEAQEAAAARVTVPLGIHAHNDSELAVANSLVAVGAGARMVQGTINGLGERCGNANLCSVIPNLELKGNFRCLPEGQLEKLTHISHLVSEAANRSQPDWLPYVGRNAFAHKGGIHVSAVRKNSRCYEHVSPELVGNDRIVTISELSGKSNVLEKVKKLGIDLSDDPKRTAGILKAVKELEARGYHFEGADASFELLSARELGTLKDYFTLQGFRVLTWAEGDGKSWSEATIKAAVPEEVSLSGGYSDPVEHTSADGSGPVEALDRALRKVLEKFYPVLGTVKLSDYKVRILNEEAGTNATTRVMISSTDGVDHWTTVGVSDNILDASWHALCDSLIYKLKKEDESRRHSGGGSIEEDKEVAYAAQN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NC_014364_1	1.1\|1128304\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128304-1128338	35	NC_014364.1	1265766-1265800	0	1.0
NC_014364_1	1.48\|1131452\|33\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131452-1131484	33	NC_014364.1	2129882-2129914	0	1.0
NC_014364_1	1.63\|1132455\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132455-1132489	35	NC_014364.1	2666560-2666594	0	1.0
NC_014364_1	1.66\|1132656\|37\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132656-1132692	37	NC_014364.1	2703649-2703685	0	1.0
NC_014364_1	1.70\|1132926\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132926-1132960	35	NC_014364.1	2666560-2666594	0	1.0
NC_014364_1	1.73\|1133127\|37\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1133127-1133163	37	NC_014364.1	2703649-2703685	0	1.0
NC_014364_1	1.51\|1131652\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131652-1131685	34	NC_014364.1	2684704-2684737	1	0.971
NC_014364_1	1.57\|1132053\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132053-1132087	35	NC_014364.1	2118905-2118939	1	0.971
NC_014364_1	1.57\|1132053\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132053-1132087	35	NC_014364.1	2732557-2732591	1	0.971
NC_014364_1	1.62\|1132389\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132389-1132422	34	NC_014364.1	2139375-2139408	1	0.971
NC_014364_1	1.43\|1131115\|37\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131115-1131151	37	NC_014364.1	198270-198306	2	0.946
NC_014364_1	1.51\|1131652\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131652-1131685	34	NC_014364.1	2139097-2139130	2	0.941
NC_014364_1	1.62\|1132389\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132389-1132422	34	NC_014364.1	2684426-2684459	2	0.941

1. spacer 1.1|1128304|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 1265766-1265800, mismatch: 0, identity: 1.0

cgggcggagcttagcctcgcctcggaggttcataa	CRISPR spacer
cgggcggagcttagcctcgcctcggaggttcataa	Protospacer
***********************************

2. spacer 1.48|1131452|33|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2129882-2129914, mismatch: 0, identity: 1.0

tgcatcaaggcagctatgccagcctggcaaaaa	CRISPR spacer
tgcatcaaggcagctatgccagcctggcaaaaa	Protospacer
*********************************

3. spacer 1.63|1132455|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2666560-2666594, mismatch: 0, identity: 1.0

acgaaaggtgtcagaataacgcctgccgtctgata	CRISPR spacer
acgaaaggtgtcagaataacgcctgccgtctgata	Protospacer
***********************************

4. spacer 1.66|1132656|37|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2703649-2703685, mismatch: 0, identity: 1.0

aatgagtagaatggtatctatgtcagcaataacaacg	CRISPR spacer
aatgagtagaatggtatctatgtcagcaataacaacg	Protospacer
*************************************

5. spacer 1.70|1132926|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2666560-2666594, mismatch: 0, identity: 1.0

acgaaaggtgtcagaataacgcctgccgtctgata	CRISPR spacer
acgaaaggtgtcagaataacgcctgccgtctgata	Protospacer
***********************************

6. spacer 1.73|1133127|37|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2703649-2703685, mismatch: 0, identity: 1.0

aatgagtagaatggtatctatgtcagcaataacaacg	CRISPR spacer
aatgagtagaatggtatctatgtcagcaataacaacg	Protospacer
*************************************

7. spacer 1.51|1131652|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2684704-2684737, mismatch: 1, identity: 0.971

tcattccggaagagggattacttgatcgctgtca	CRISPR spacer
tcataccggaagagggattacttgatcgctgtca	Protospacer
**** *****************************

8. spacer 1.57|1132053|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2118905-2118939, mismatch: 1, identity: 0.971

atgattgaattaggcgataggctctacctttcagg	CRISPR spacer
atggttgaattaggcgataggctctacctttcagg	Protospacer
***.*******************************

9. spacer 1.57|1132053|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2732557-2732591, mismatch: 1, identity: 0.971

atgattgaattaggcgataggctctacctttcagg	CRISPR spacer
atgattgaattaggcaataggctctacctttcagg	Protospacer
***************.*******************

10. spacer 1.62|1132389|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2139375-2139408, mismatch: 1, identity: 0.971

gagcgaatggtgatcgacgggaagatcgcccacg	CRISPR spacer
gagcggatggtgatcgacgggaagatcgcccacg	Protospacer
*****.****************************

11. spacer 1.43|1131115|37|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 198270-198306, mismatch: 2, identity: 0.946

ttttcaaaaacatccctggcagcctctattgctgctg	CRISPR spacer
ttttcaaaagcatccctggcagcctctatcgctgctg	Protospacer
*********.*******************.*******

12. spacer 1.51|1131652|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2139097-2139130, mismatch: 2, identity: 0.941

tcattccggaagagggattacttgatcgctgtca	CRISPR spacer
tcataccggaagaaggattacttgatcgctgtca	Protospacer
**** ********.********************

13. spacer 1.62|1132389|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to position: 2684426-2684459, mismatch: 2, identity: 0.941

gagcgaatggtgatcgacgggaagatcgcccacg	CRISPR spacer
gagcggatggtgatcgacgggaagatcgctcacg	Protospacer
*****.***********************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	KT264829	Gokushovirus WZ-2015a isolate 81Fra17, complete genome	3022-3055	6	0.824
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	MK496743	Capybara microvirus Cap1_SP_188, complete genome	3037-3070	6	0.824
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	MG945754	UNVERIFIED: Microviridae sp. isolate 3067-1801, complete genome	220-253	7	0.794
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	MH617555	Microviridae sp. isolate ctce125, complete genome	3798-3831	8	0.765
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	MH617175	Microviridae sp. isolate ctec730, complete genome	3164-3197	8	0.765
NC_014364_1	1.37\|1130716\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130716-1130749	34	KT264835	Gokushovirus WZ-2015a isolate 87Rt1, complete genome	3450-3483	8	0.765
NC_014364_1	1.9\|1128839\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128839-1128873	35	MH542234	Staphylococcus phage Terranova, complete genome	4120-4154	9	0.743
NC_014364_1	1.9\|1128839\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128839-1128873	35	NC_041928	Staphylococcus phage phiIBB-SEP1, complete genome	108246-108280	9	0.743
NC_014364_1	1.9\|1128839\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128839-1128873	35	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	110769-110803	9	0.743
NC_014364_1	1.9\|1128839\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128839-1128873	35	MN694065	Marine virus AFVG_250M443, complete genome	35773-35807	9	0.743
NC_014364_1	1.9\|1128839\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1128839-1128873	35	MK327946	Escherichia phage vB_EcoM_G4507, complete genome	35488-35522	9	0.743
NC_014364_1	1.40\|1130915\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130915-1130949	35	NZ_LR215040	Mycoplasma columborale strain NCTC10179 plasmid 2	15034-15068	9	0.743
NC_014364_1	1.40\|1130915\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130915-1130949	35	NC_048677	Lactobacillus phage LpeD, complete genome	111776-111810	9	0.743
NC_014364_1	1.27\|1130045\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1130045-1130079	35	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	85647-85681	10	0.714
NC_014364_1	1.46\|1131319\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131319-1131352	34	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	2109545-2109578	10	0.706
NC_014364_1	1.59\|1132188\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132188-1132221	34	NZ_KT601170	Staphylococcus sciuri strain wo28-3 plasmid pwo28-3, complete sequence	29925-29958	10	0.706
NC_014364_1	1.59\|1132188\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132188-1132221	34	NZ_KX982169	Staphylococcus sciuri strain wo27-9 plasmid pWo27-9, complete sequence	29473-29506	10	0.706
NC_014364_1	1.59\|1132188\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132188-1132221	34	NZ_KX982171	Staphylococcus sciuri strain wo28-1 plasmid pWo28-1, complete sequence	33781-33814	10	0.706
NC_014364_1	1.62\|1132389\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132389-1132422	34	NC_014838	Pantoea sp. At-9b plasmid pPAT9B01, complete sequence	203362-203395	10	0.706
NC_014364_1	1.67\|1132725\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132725-1132758	34	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	2109545-2109578	10	0.706
NC_014364_1	1.74\|1133196\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1133196-1133229	34	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	2109545-2109578	10	0.706
NC_014364_1	1.62\|1132389\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132389-1132422	34	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	1000018-1000051	11	0.676

1. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to KT264829 (Gokushovirus WZ-2015a isolate 81Fra17, complete genome) position: , mismatch: 6, identity: 0.824

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ttaacgttgacttatgacgacgctcatttgcctg	Protospacer
 * **  * ***********.*************

2. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MK496743 (Capybara microvirus Cap1_SP_188, complete genome) position: , mismatch: 6, identity: 0.824

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ctcactttaacttatgacgatgctcacttgcctg	Protospacer
 *.**. * *****************.*******

3. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MG945754 (UNVERIFIED: Microviridae sp. isolate 3067-1801, complete genome) position: , mismatch: 7, identity: 0.794

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ttgactcttacttttgatgatgctcatttgcctg	Protospacer
 * **. *.**** ***.****************

4. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MH617555 (Microviridae sp. isolate ctce125, complete genome) position: , mismatch: 8, identity: 0.765

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ataactcttacttatgacgatagtcatttgccta	Protospacer
.* **. *.************. **********.

5. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MH617175 (Microviridae sp. isolate ctec730, complete genome) position: , mismatch: 8, identity: 0.765

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ttgactcttacttatgatgaagctcatttgcctc	Protospacer
 * **. *.********.** ************

6. spacer 1.37|1130716|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to KT264835 (Gokushovirus WZ-2015a isolate 87Rt1, complete genome) position: , mismatch: 8, identity: 0.765

gttaccatcacttatgacgatgctcatttgcctg	CRISPR spacer
ttgactttgacttatgacgaggttcatttgcctt	Protospacer
 * **. * *********** *.**********

7. spacer 1.9|1128839|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MH542234 (Staphylococcus phage Terranova, complete genome) position: , mismatch: 9, identity: 0.743

ataataaagaacatgcaagaaaaagtaacgataat	CRISPR spacer
atattaaagaacatggaagaaaaagttatgtaggg	Protospacer
*** *********** ********** *.*  ..

8. spacer 1.9|1128839|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_041928 (Staphylococcus phage phiIBB-SEP1, complete genome) position: , mismatch: 9, identity: 0.743

ataataaagaacatgcaagaaaaagtaacgataat	CRISPR spacer
atattaaagaacatggaagaaaaagttatgtaggg	Protospacer
*** *********** ********** *.*  ..

9. spacer 1.9|1128839|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 9, identity: 0.743

ataataaagaacatgcaagaaaaagtaacgataat	CRISPR spacer
atattaaagaacatggaagaaaaagttatgtaggg	Protospacer
*** *********** ********** *.*  ..

10. spacer 1.9|1128839|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MN694065 (Marine virus AFVG_250M443, complete genome) position: , mismatch: 9, identity: 0.743

ataataaagaacatgcaagaaaaagtaacgataat	CRISPR spacer
ataataaagattatgcaagaaaaagagcagaagaa	Protospacer
********** .************* .  ** .*

11. spacer 1.9|1128839|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to MK327946 (Escherichia phage vB_EcoM_G4507, complete genome) position: , mismatch: 9, identity: 0.743

ataataaagaacatgcaagaaaaagtaacgataat	CRISPR spacer
tgaataaataaaatgcaagaaaaagtatcacatat	Protospacer
  ****** ** *************** *.   **

12. spacer 1.40|1130915|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR215040 (Mycoplasma columborale strain NCTC10179 plasmid 2) position: , mismatch: 9, identity: 0.743

attaaataaattaaaaaaggagcaagcctattcaa	CRISPR spacer
atcaaataaattaaaataggagcaatcaaaattgc	Protospacer
**.************* ******** *  * *..

13. spacer 1.40|1130915|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_048677 (Lactobacillus phage LpeD, complete genome) position: , mismatch: 9, identity: 0.743

attaa--ataaattaaaaaaggagcaagcctattcaa	CRISPR spacer
--taagtataaattaaataaggaacaagcctaaatgc	Protospacer
  ***  ********** *****.********  ..

14. spacer 1.27|1130045|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 10, identity: 0.714

atccatgagcgaacaaaacaagaaaaattatacgc	CRISPR spacer
gagcttgagcgaaaaaaacaagaagaattagcaga	Protospacer
.  * ******** **********.*****   *

15. spacer 1.46|1131319|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.706

atggctgatgatcgatgtgtacaggttccattcg	CRISPR spacer
cgttctgatgatcgatgtcgacaggttcaaactg	Protospacer
    **************  ******** * ..*

16. spacer 1.59|1132188|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT601170 (Staphylococcus sciuri strain wo28-3 plasmid pwo28-3, complete sequence) position: , mismatch: 10, identity: 0.706

aattatactctataatttatagtatattgaataa	CRISPR spacer
ttctttttaatataatttgtagtatattgattaa	Protospacer
  .* * .  ********.*********** ***

17. spacer 1.59|1132188|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX982169 (Staphylococcus sciuri strain wo27-9 plasmid pWo27-9, complete sequence) position: , mismatch: 10, identity: 0.706

aattatactctataatttatagtatattgaataa	CRISPR spacer
ttctttttaatataatttgtagtatattgattaa	Protospacer
  .* * .  ********.*********** ***

18. spacer 1.59|1132188|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX982171 (Staphylococcus sciuri strain wo28-1 plasmid pWo28-1, complete sequence) position: , mismatch: 10, identity: 0.706

aattatactctataatttatagtatattgaataa	CRISPR spacer
ttctttttaatataatttgtagtatattgattaa	Protospacer
  .* * .  ********.*********** ***

19. spacer 1.62|1132389|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_014838 (Pantoea sp. At-9b plasmid pPAT9B01, complete sequence) position: , mismatch: 10, identity: 0.706

gagcgaatggtgatcgacgggaagatcgcccacg	CRISPR spacer
ccgccgatagtgatcgacgggaaggtcgccagga	Protospacer
  ** .**.***************.***** . .

20. spacer 1.67|1132725|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.706

atggctgatgatcgatgtgtacaggttccattcg	CRISPR spacer
cgttctgatgatcgatgtcgacaggttcaaactg	Protospacer
    **************  ******** * ..*

21. spacer 1.74|1133196|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 10, identity: 0.706

atggctgatgatcgatgtgtacaggttccattcg	CRISPR spacer
cgttctgatgatcgatgtcgacaggttcaaactg	Protospacer
    **************  ******** * ..*

22. spacer 1.62|1132389|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 11, identity: 0.676

gagcgaatggtgatcgacgggaagatcgcccacg	CRISPR spacer
cagcgaatggagagcgacgggaagaggtcgggtc	Protospacer
 ********* ** ***********   *  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

402145 : 435121

Virus_Rctr41k(50.0%)

integrase,transposase

attL 405159:405178|attR 433339:433358

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041865946.1\|402145_402505_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.2e-30	51.7
WP_049784571.1\|402486_403263_-\|integrase	phage integrase N-terminal SAM-like domain-containing protein	A0A1P8DJJ6	Virus_Rctr41k	3.0e-10	39.3
WP_013253006.1\|403842_404571_+	hypothetical protein	NA	NA	NA	NA
WP_013253007.1\|404567_405002_+	hypothetical protein	NA	NA	NA	NA
405159:405178	attL	NA	NA	NA	NA
WP_013253008.1\|405192_405876_+	NERD domain-containing protein	NA	NA	NA	NA
WP_013253009.1\|405872_406436_+	hypothetical protein	NA	NA	NA	NA
WP_013253010.1\|406635_408267_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_013253011.1\|408461_409388_+	hypothetical protein	NA	NA	NA	NA
WP_013253012.1\|410186_410729_+	TIR domain-containing protein	NA	NA	NA	NA
WP_013253013.1\|410721_411363_+	hypothetical protein	NA	NA	NA	NA
WP_013253014.1\|411619_411874_+	hypothetical protein	NA	NA	NA	NA
WP_013253015.1\|411866_412292_+	PIN domain-containing protein	NA	NA	NA	NA
WP_013253016.1\|412659_413004_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_013253017.1\|412993_413389_+	HEPN domain-containing protein	NA	NA	NA	NA
WP_013253018.1\|414086_414989_+	hypothetical protein	NA	NA	NA	NA
WP_013253019.1\|415133_416135_+	hypothetical protein	NA	NA	NA	NA
WP_148224013.1\|416311_416527_-	hypothetical protein	NA	NA	NA	NA
WP_171814748.1\|416872_417358_+	hypothetical protein	NA	NA	NA	NA
WP_013253020.1\|417621_418287_+	hypothetical protein	NA	NA	NA	NA
WP_013253021.1\|418562_419750_+	ATP-binding protein	NA	NA	NA	NA
WP_013253022.1\|419996_420905_+	hypothetical protein	NA	NA	NA	NA
WP_013253023.1\|421115_421517_+	hypothetical protein	NA	NA	NA	NA
WP_013253024.1\|421533_422013_+	hypothetical protein	NA	NA	NA	NA
WP_013253025.1\|422206_422860_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_013253026.1\|422856_423276_+	hypothetical protein	NA	NA	NA	NA
WP_095522519.1\|423336_423504_+\|transposase	transposase	NA	NA	NA	NA
WP_148224015.1\|423591_424455_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	9.6e-26	32.7
WP_013253027.1\|424834_425089_+	hypothetical protein	NA	NA	NA	NA
WP_013253028.1\|425081_425507_+	PIN domain-containing protein	NA	NA	NA	NA
WP_171814749.1\|425938_426070_+	hypothetical protein	NA	NA	NA	NA
WP_083771438.1\|426249_426738_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_041865951.1\|426956_427907_+	hypothetical protein	NA	NA	NA	NA
WP_083771439.1\|427930_428539_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_171814750.1\|429026_429248_+	hypothetical protein	NA	NA	NA	NA
WP_013253031.1\|429321_430680_-	MATE family efflux transporter	NA	NA	NA	NA
WP_013253032.1\|431105_432038_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013253033.1\|432218_433304_+	Fic family protein	D7RWK9	Brochothrix_phage	7.1e-26	29.4
WP_013253034.1\|433564_434089_+	DUF4468 domain-containing protein	NA	NA	NA	NA
433339:433358	attR	NA	NA	NA	NA
WP_041865953.1\|434917_435121_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1842198 : 1853457

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049784607.1\|1842198_1844673_+	helicase c2	A0A127AW80	Bacillus_phage	1.1e-77	30.9
WP_013254304.1\|1844901_1845165_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	9.4e-17	47.7
WP_013254305.1\|1845328_1845676_+	hypothetical protein	NA	NA	NA	NA
WP_013254306.1\|1845883_1846759_+	RNA polymerase sigma factor RpoD/SigA	A0A248SJA5	Salicola_phage	2.4e-16	25.2
WP_013254307.1\|1846937_1849604_+	pyruvate, phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	1.4e-94	44.4
WP_041866021.1\|1849723_1850413_+	base excision DNA repair protein	NA	NA	NA	NA
WP_013254309.1\|1850512_1852147_+	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.6e-45	25.2
WP_013254310.1\|1852197_1853457_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	2.5e-70	41.7

DBSCAN-SWA_3

2084081 : 2141672

Marinitoga_camini_virus(14.29%)

protease,terminase,transposase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013254518.1\|2084081_2086619_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	3.2e-125	39.5
WP_013254519.1\|2086622_2087255_+	3'-5' exonuclease	A0A0K2SUJ2	Clostridium_phage	9.5e-23	38.2
WP_013254520.1\|2087251_2088181_+	ribonuclease Z	NA	NA	NA	NA
WP_013254521.1\|2088199_2089363_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_148224163.1\|2089452_2090274_+	AmmeMemoRadiSam system protein B	NA	NA	NA	NA
WP_013254523.1\|2090261_2091935_-	DUF115 domain-containing protein	NA	NA	NA	NA
WP_013254524.1\|2091912_2093514_-	DUF115 domain-containing protein	NA	NA	NA	NA
WP_013254525.1\|2093516_2094467_-	hypothetical protein	NA	NA	NA	NA
WP_013254526.1\|2094463_2097532_-	hypothetical protein	NA	NA	NA	NA
WP_148224164.1\|2097728_2098127_+	septum formation initiator family protein	NA	NA	NA	NA
WP_013254528.1\|2098123_2098699_+	L-threonylcarbamoyladenylate synthase	NA	NA	NA	NA
WP_013254529.1\|2098733_2100065_-	DUF1015 domain-containing protein	NA	NA	NA	NA
WP_013254530.1\|2100163_2100790_+	thiamine diphosphokinase	NA	NA	NA	NA
WP_013254531.1\|2100808_2102602_+	hypothetical protein	NA	NA	NA	NA
WP_013254532.1\|2102582_2103077_-	HIT domain-containing protein	NA	NA	NA	NA
WP_013254533.1\|2103087_2103891_-	hypothetical protein	NA	NA	NA	NA
WP_013254534.1\|2103887_2104844_-	HAD family hydrolase	NA	NA	NA	NA
WP_041866032.1\|2104874_2105219_+	hypothetical protein	NA	NA	NA	NA
WP_013254536.1\|2105221_2105971_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_148224165.1\|2106127_2106268_+	ATP-binding protein	NA	NA	NA	NA
WP_013254538.1\|2107253_2108183_+	ketopantoate reductase	NA	NA	NA	NA
WP_083771473.1\|2108360_2109227_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_013254540.1\|2109775_2110222_-	DUF1284 domain-containing protein	NA	NA	NA	NA
WP_013254541.1\|2110306_2110852_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_148224058.1\|2111227_2111488_-	hypothetical protein	NA	NA	NA	NA
WP_013254542.1\|2111684_2112812_+	InlB B-repeat-containing protein	NA	NA	NA	NA
WP_013254543.1\|2112813_2115105_+	InlB B-repeat-containing protein	NA	NA	NA	NA
WP_013254544.1\|2115402_2116614_-	AraC family transcriptional regulator	S5WIW9	Leptospira_phage	3.6e-10	33.6
WP_148224166.1\|2116901_2117300_+	PIN domain-containing protein	NA	NA	NA	NA
WP_148224167.1\|2117424_2118084_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013254547.1\|2118588_2118939_-	hypothetical protein	NA	NA	NA	NA
WP_171814806.1\|2119180_2119798_+	DNA/RNA non-specific endonuclease	A0A2H4N7Z3	Lake_Baikal_phage	9.0e-26	44.5
WP_013254549.1\|2119847_2121035_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	3.0e-54	34.4
WP_148224059.1\|2120987_2121332_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_013254550.1\|2121423_2123298_-	hypothetical protein	A0A139ZPI1	Marinitoga_camini_virus	2.8e-30	24.8
WP_013254551.1\|2123294_2124836_-	hypothetical protein	NA	NA	NA	NA
WP_013254552.1\|2124848_2126519_-	ATP-binding protein	A0A139ZPI2	Marinitoga_camini_virus	1.2e-59	30.5
WP_013254553.1\|2126532_2127723_-	hypothetical protein	NA	NA	NA	NA
WP_013254554.1\|2127925_2128306_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_041866037.1\|2128348_2128567_+	hypothetical protein	NA	NA	NA	NA
WP_013254555.1\|2128619_2128988_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013254556.1\|2129016_2129205_+	hypothetical protein	NA	NA	NA	NA
WP_148224168.1\|2130394_2130664_+	hypothetical protein	NA	NA	NA	NA
WP_013254559.1\|2130660_2131533_+	phage recombination protein Bet	A0A1P8BKG8	Lactococcus_phage	4.7e-12	31.4
WP_013254560.1\|2131551_2132241_+	hypothetical protein	R9VWB9	Serratia_phage	9.4e-24	33.9
WP_013254561.1\|2132237_2132714_+	hypothetical protein	NA	NA	NA	NA
WP_013254562.1\|2132710_2133103_+	hypothetical protein	NA	NA	NA	NA
WP_013254563.1\|2133112_2133715_+	single-stranded DNA-binding protein	A0A0F7L5K1	uncultured_marine_virus	7.4e-17	45.0
WP_013254564.1\|2133727_2134816_+	hypothetical protein	NA	NA	NA	NA
WP_013254565.1\|2134820_2135222_+	hypothetical protein	NA	NA	NA	NA
WP_013254566.1\|2135205_2135424_+	hypothetical protein	NA	NA	NA	NA
WP_013254567.1\|2135420_2135612_+	hypothetical protein	NA	NA	NA	NA
WP_013254568.1\|2135635_2135815_+	hypothetical protein	NA	NA	NA	NA
WP_013254569.1\|2135957_2136674_+	hypothetical protein	NA	NA	NA	NA
WP_013254570.1\|2136981_2137380_+	hypothetical protein	NA	NA	NA	NA
WP_013254571.1\|2137383_2137893_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	1.1e-05	31.5
WP_013254572.1\|2137889_2139611_+\|terminase	terminase large subunit	A0A0U4B0C7	Pseudomonas_phage	5.5e-97	38.6
WP_013254573.1\|2139607_2140849_+\|portal	phage portal protein	Q6DMU2	Streptococcus_phage	4.1e-86	43.8
WP_013254574.1\|2140838_2141672_+\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	6.4e-35	39.9

DBSCAN-SWA_4

2666654 : 2686450

Organic_Lake_phycodnavirus(16.67%)

capsid,portal,protease,terminase,integrase,head

attL 2665776:2665791|attR 2681244:2681259

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2665776:2665791	attL	NA	NA	NA	NA
WP_041866071.1\|2666654_2667515_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_041866072.1\|2667511_2667916_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_013255054.1\|2667948_2668332_-	DNA repair protein RadC	NA	NA	NA	NA
WP_041866073.1\|2668603_2668852_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013255055.1\|2668814_2669231_-	hypothetical protein	NA	NA	NA	NA
WP_013255056.1\|2669289_2669850_-	hypothetical protein	NA	NA	NA	NA
WP_013255057.1\|2670084_2670474_-	hypothetical protein	NA	NA	NA	NA
WP_013255058.1\|2670475_2670724_-	hypothetical protein	NA	NA	NA	NA
WP_013255060.1\|2670818_2671190_-	hypothetical protein	NA	NA	NA	NA
WP_013254586.1\|2671196_2671430_-	hypothetical protein	NA	NA	NA	NA
WP_013255061.1\|2671434_2672046_-	hypothetical protein	F2Y2D1	Organic_Lake_phycodnavirus	2.3e-05	48.4
WP_013255062.1\|2672042_2675357_-	hypothetical protein	NA	NA	NA	NA
WP_013255063.1\|2675359_2677537_-	hypothetical protein	NA	NA	NA	NA
WP_013255064.1\|2677517_2677793_-	hypothetical protein	NA	NA	NA	NA
WP_013255065.1\|2677813_2678215_-	hypothetical protein	NA	NA	NA	NA
WP_013255066.1\|2678217_2678910_-	hypothetical protein	NA	NA	NA	NA
WP_013255067.1\|2678911_2679310_-	hypothetical protein	NA	NA	NA	NA
WP_013255068.1\|2679287_2679713_-	hypothetical protein	NA	NA	NA	NA
WP_013255069.1\|2679709_2680267_-	hypothetical protein	NA	NA	NA	NA
WP_013255070.1\|2680270_2680579_-	hypothetical protein	NA	NA	NA	NA
WP_013255071.1\|2680637_2681888_-\|capsid	phage major capsid protein	A0A0F7L2V9	uncultured_marine_virus	1.0e-60	43.0
2681244:2681259	attR	NA	NA	NA	NA
WP_013255072.1\|2681902_2682610_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	7.9e-26	39.4
WP_013255073.1\|2682606_2684223_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	8.3e-71	39.5
WP_013255074.1\|2684219_2685944_-\|terminase	terminase large subunit	A0A0U4B0C7	Pseudomonas_phage	2.5e-97	38.3
WP_013255075.1\|2685940_2686450_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	2.9e-06	33.1

DBSCAN-SWA_5

3343948 : 3353341

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013255680.1\|3343948_3345814_-	phosphoribosylamine--glycine ligase	M4QRX9	Synechococcus_phage	8.8e-16	40.8
WP_013255681.1\|3345801_3346857_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.0e-61	43.4
WP_013255682.1\|3346856_3348302_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.1e-53	33.2
WP_013255683.1\|3348294_3349008_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	3.1e-46	40.9
WP_013255684.1\|3349004_3349490_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	3.9e-24	40.1
WP_049784782.1\|3349513_3353341_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.1e-31	26.6

Anti-CRISPR protein detection

Acr_ID: NC_014364.1|WP_013254555.1|2128619_2128988_+|helix-turn-helix-domain-containing-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NC_014364.1|WP_013254555.1|2128619_2128988_+|helix-turn-helix-domain-containing-protein

2128619_2128988_+

122 aa aa

2084081-2141672

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NC_014364_1	TypeI	1.48\|1131452\|33\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131452-1131484	33	2129882-2129914	0
NC_014364_1	TypeI	1.51\|1131652\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1131652-1131685	34	2139097-2139130	2
NC_014364_1	TypeI	1.57\|1132053\|35\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132053-1132087	35	2118939-2118905	1
NC_014364_1	TypeI	1.62\|1132389\|34\|NC_014364\|PILER-CR,CRISPRCasFinder,CRT	1132389-1132422	34	2139375-2139408	1

1. spacer 1.48|1131452|33|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_014364 position: 2129882-2129914, mismatch: 0

tgcatcaaggcagctatgccagcctggcaaaaa	CRISPR spacer
tgcatcaaggcagctatgccagcctggcaaaaa	Protospacer
*********************************

2. spacer 1.51|1131652|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_014364 position: 2139097-2139130, mismatch: 2

tcattccggaagagggattacttgatcgctgtca	CRISPR spacer
tcataccggaagaaggattacttgatcgctgtca	Protospacer
**** ********.********************

3. spacer 1.57|1132053|35|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_014364 position: 2118939-2118905, mismatch: 1

atgattgaattaggcgataggctctacctttcagg	CRISPR spacer
atggttgaattaggcgataggctctacctttcagg	Protospacer
***.*******************************

4. spacer 1.62|1132389|34|NC_014364|PILER-CR,CRISPRCasFinder,CRT matches to NC_014364 position: 2139375-2139408, mismatch: 1

gagcgaatggtgatcgacgggaagatcgcccacg	CRISPR spacer
gagcggatggtgatcgacgggaagatcgcccacg	Protospacer
*****.****************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_014364

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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