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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_009488 Orientia tsutsugamushi str. Boryong, complete genome 2 crisprs RT,DEDDh 0 0 15 0

Results visualization

1. NC_009488
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009488_1 1418224-1418374 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_009488_2 1698843-1698993 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 17309 : 98869 46 Thermus_phage(18.18%) transposase,integrase attL 14471:14524|attR 96929:96982
DBSCAN-SWA_2 480258 : 547953 45 Bacteriophage(25.0%) transposase,tRNA,integrase attL 487867:487919|attR 517170:517222
DBSCAN-SWA_3 554781 : 647989 56 Wolbachia_phage(20.0%) transposase,tRNA,integrase attL 597145:597204|attR 646595:646742
DBSCAN-SWA_4 753329 : 842865 53 Moraxella_phage(22.22%) transposase,tRNA,integrase attL 796950:797009|attR 853259:854408
DBSCAN-SWA_5 851114 : 921136 55 uncultured_virus(20.0%) protease,transposase,tRNA,integrase attL 902322:902355|attR 931516:931549
DBSCAN-SWA_6 944259 : 1035902 52 uncultured_Mediterranean_phage(36.36%) transposase,tRNA,integrase attL 951050:951109|attR 1041339:1041411
DBSCAN-SWA_7 1052148 : 1143203 60 Bodo_saltans_virus(11.11%) transposase,tRNA,integrase attL 1104931:1104963|attR 1157667:1157699
DBSCAN-SWA_8 1161255 : 1226335 43 Moraxella_phage(30.0%) transposase,tRNA,integrase attL 1152115:1152174|attR 1241586:1245209
DBSCAN-SWA_9 1266514 : 1330891 47 Bacteriophage(16.67%) protease,transposase,tRNA,integrase attL 1286145:1286204|attR 1313772:1313888
DBSCAN-SWA_10 1347303 : 1443185 52 Anomala_cuprea_entomopoxvirus(20.0%) transposase,integrase attL 1369765:1369824|attR 1398507:1398610
DBSCAN-SWA_11 1625788 : 1687490 45 Moraxella_phage(25.0%) transposase,integrase,portal attL 1617682:1617705|attR 1689134:1689157
DBSCAN-SWA_12 1729525 : 1771157 30 Bodo_saltans_virus(20.0%) transposase,integrase,protease,terminase,tRNA attL 1751659:1751680|attR 1766241:1766262
DBSCAN-SWA_13 1826682 : 1903480 44 Tupanvirus(18.18%) transposase,tRNA,integrase attL 1816477:1816518|attR 1832225:1832266
DBSCAN-SWA_14 1918702 : 1998075 44 Moraxella_phage(40.0%) transposase,integrase attL 1952236:1952279|attR 1976834:1976877
DBSCAN-SWA_15 2014551 : 2116959 56 Pseudomonas_phage(20.0%) protease,transposase,tRNA,integrase attL 2009538:2009555|attR 2071343:2071360
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage