CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NC_006154	Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence	0 crisprs	NA	0	0
NC_006153	Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence	0 crisprs	NA	0	1
NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	9 crisprs	DEDDh,csa3,DinG,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	16	6

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7054 : 32990

Enterobacteria_phage(50.0%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012414142.1\|7054_7462_-\|transposase	transposase	S5FNT8	Shigella_phage	4.4e-21	42.8
WP_002213244.1\|7488_7806_-\|transposase	transposase	NA	NA	NA	NA
WP_002213246.1\|7977_8436_-	hypothetical protein	NA	NA	NA	NA
WP_042469136.1\|8504_8774_+\|transposase	transposase	NA	NA	NA	NA
WP_106461760.1\|8800_9100_+	hypothetical protein	NA	NA	NA	NA
WP_011191362.1\|9102_10401_-	trimeric autotransporter adhesin YadA	Q9MCI8	Enterobacteria_phage	2.0e-11	54.2
WP_002213256.1\|11385_13701_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	1.0e-279	51.6
WP_002213258.1\|13864_14416_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	5.9e-77	80.3
WP_012414143.1\|14434_14899_+	hypothetical protein	NA	NA	NA	NA
WP_002229829.1\|15037_15367_+	hypothetical protein	NA	NA	NA	NA
WP_086025330.1\|15466_16565_+\|transposase	IS3-like element ISYps8 family transposase	S5WIU1	Leptospira_phage	5.7e-47	39.3
WP_002213267.1\|16713_17139_-	type III secretion system chaperone SycH	NA	NA	NA	NA
WP_011191364.1\|17914_19087_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.8e-221	95.6
WP_002213403.1\|19896_20289_-	type III secretion system chaperone SycE/YerA	NA	NA	NA	NA
WP_002229754.1\|20482_21142_+	type III secretion system effector GTPase activator YopE	NA	NA	NA	NA
WP_002213360.1\|21281_21581_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_012414146.1\|21573_21816_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_002213357.1\|22358_22532_+	hypothetical protein	NA	NA	NA	NA
WP_157868821.1\|22681_22963_-	hypothetical protein	NA	NA	NA	NA
WP_011191369.1\|23122_24088_-	ParB/RepB/Spo0J family plasmid partition protein	Q7Y3Y7	Yersinia_phage	4.0e-89	56.6
WP_002220902.1\|24084_25251_-	plasmid-partitioning protein SopA	Q7Y3Y6	Yersinia_phage	3.5e-196	85.3
WP_071879999.1\|27268_27886_-	conjugal transfer protein TraT	NA	NA	NA	NA
WP_011191373.1\|28490_29039_-	hypothetical protein	NA	NA	NA	NA
WP_011191374.1\|29512_30481_+\|protease	T3SS effector cysteine protease YopT	NA	NA	NA	NA
WP_011191375.1\|30480_30873_+	type III secretion system chaperone SycT	NA	NA	NA	NA
WP_041175527.1\|30916_31228_-	hypothetical protein	NA	NA	NA	NA
WP_011191376.1\|31575_31995_+	hypothetical protein	NA	NA	NA	NA
WP_123772489.1\|32744_32990_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NC_006155

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NC_006155_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_1

17439-17527

Orphan

Consensus_repeat	Method
GCGAAACACAGAAATTACGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_1

>merge|NC_006155|1|17439-17527|CRISPRCasFinder
GCGAAACACAGAAATTACGCGTTTTACTGATAACCCCATGCCAAAGGCGTGGGGTTTTTGCTGTGCGCGAAACACAGAAATTACGCGTT

>NC_006155|1|1|17439-17527|CRISPRCasFinder
GCGAAACACAGAAATTACGCGTT	TTACTGATAACCCCATGCCAAAGGCGTGGGGTTTTTGCTGTGC
GCGAAACACAGAAATTACGCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002212255.1\|2524_3991_-\|ATPase-RavA-stimulator-ViaA	unknown	unknown	gnl\|CDD\|236815
NC_006155.1\|WP_002213170.1\|20494_20764_+\|YihD-family-protein	unknown	unknown	gnl\|CDD\|225626
NC_006155.1\|WP_002217538.1\|19222_19753_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|236750
NC_006155.1\|WP_002213155.1\|28356_29730_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NC_006155.1\|WP_011191444.1\|29783_31196_-\|nitrogen-regulation-protein-NR(I)	unknown	unknown	gnl\|CDD\|182842
NC_006155.1\|WP_002212250.1\|9495_10920_-\|multidrug-transporter-subunit-MdtD	unknown	unknown	gnl\|CDD\|182502
NC_006155.1\|WP_002213160.1\|26188_26839_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NC_006155.1\|WP_002215905.1\|10999_11689_-\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NC_006155.1\|WP_002213168.1\|21868_22492_+\|thiol:disulfide-interchange-protein-DsbA	unknown	unknown	gnl\|CDD\|182863
NC_006155.1\|WP_002212256.1\|1433_2426_+\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|225304
NC_006155.1\|WP_002212257.1\|802_1264_-\|transcriptional-regulator-AsnC	unknown	unknown	gnl\|CDD\|183019
NC_006155.1\|WP_002215906.1\|9328_9499_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182448
NC_006155.1\|WP_011191443.1\|22982_25781_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NC_006155.1\|WP_002213158.1\|27603_28170_+\|Der-GTPase-activating-protein-YihI	unknown	unknown	gnl\|CDD\|235370
NC_006155.1\|WP_002213151.1\|31203_32253_-\|nitrogen-regulation-protein-NR(II)	unknown	unknown	gnl\|CDD\|182947
NC_006155.1\|WP_002213169.1\|20854_21841_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|236974
NC_006155.1\|WP_011191441.1\|8349_9276_+\|ribokinase	unknown	unknown	gnl\|CDD\|236858
NC_006155.1\|WP_011191439.1\|3994_5533_-\|ATPase-RavA	unknown	unknown	gnl\|CDD\|184118
NC_006155.1\|WP_011191440.1\|5806_7675_+\|low-affinity-potassium-transporter-Kup	unknown	unknown	gnl\|CDD\|182693
NC_006155.1\|WP_002212252.1\|7879_8299_+\|D-ribose-pyranase	unknown	unknown	gnl\|CDD\|183318

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002212255.1\|2524_3991_-\|ATPase-RavA-stimulator-ViaA	gnl\|CDD\|236815	PRK10997, yieM, ATPase RavA stimulator ViaA.	0
NC_006155.1\|WP_002213170.1\|20494_20764_+\|YihD-family-protein	gnl\|CDD\|225626	COG3084, COG3084, Uncharacterized protein conserved in bacteria [Function unknown].	3.68849e-55
NC_006155.1\|WP_002217538.1\|19222_19753_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|236750	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional.	1.06099e-119
NC_006155.1\|WP_002213155.1\|28356_29730_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NC_006155.1\|WP_011191444.1\|29783_31196_-\|nitrogen-regulation-protein-NR(I)	gnl\|CDD\|182842	PRK10923, glnG, nitrogen regulation protein NR(I); Provisional.	0
NC_006155.1\|WP_002212250.1\|9495_10920_-\|multidrug-transporter-subunit-MdtD	gnl\|CDD\|182502	PRK10504, PRK10504, putative transporter; Provisional.	2.73997e-137
NC_006155.1\|WP_002213160.1\|26188_26839_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	1.68554e-117
NC_006155.1\|WP_002215905.1\|10999_11689_-\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.18389e-68
NC_006155.1\|WP_002213168.1\|21868_22492_+\|thiol:disulfide-interchange-protein-DsbA	gnl\|CDD\|182863	PRK10954, PRK10954, thiol:disulfide interchange protein DsbA.	4.40243e-154
NC_006155.1\|WP_002212256.1\|1433_2426_+\|aspartate--ammonia-ligase	gnl\|CDD\|225304	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism].	0
NC_006155.1\|WP_002212257.1\|802_1264_-\|transcriptional-regulator-AsnC	gnl\|CDD\|183019	PRK11179, PRK11179, DNA-binding transcriptional regulator AsnC; Provisional.	2.51426e-113
NC_006155.1\|WP_002215906.1\|9328_9499_+\|hypothetical-protein	gnl\|CDD\|182448	PRK10423, PRK10423, transcriptional repressor RbsR; Provisional.	1.25877e-10
NC_006155.1\|WP_011191443.1\|22982_25781_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NC_006155.1\|WP_002213158.1\|27603_28170_+\|Der-GTPase-activating-protein-YihI	gnl\|CDD\|235370	PRK05244, PRK05244, Der GTPase-activating protein YihI.	1.58463e-65
NC_006155.1\|WP_002213151.1\|31203_32253_-\|nitrogen-regulation-protein-NR(II)	gnl\|CDD\|182947	PRK11073, glnL, nitrogen regulation protein NR(II).	0
NC_006155.1\|WP_002213169.1\|20854_21841_+\|serine/threonine-protein-kinase	gnl\|CDD\|236974	PRK11768, PRK11768, serine/threonine protein kinase.	0
NC_006155.1\|WP_011191441.1\|8349_9276_+\|ribokinase	gnl\|CDD\|236858	PRK11142, PRK11142, ribokinase; Provisional.	0
NC_006155.1\|WP_011191439.1\|3994_5533_-\|ATPase-RavA	gnl\|CDD\|184118	PRK13531, PRK13531, regulatory ATPase RavA; Provisional.	0
NC_006155.1\|WP_011191440.1\|5806_7675_+\|low-affinity-potassium-transporter-Kup	gnl\|CDD\|182693	PRK10745, trkD, low affinity potassium transporter Kup.	0
NC_006155.1\|WP_002212252.1\|7879_8299_+\|D-ribose-pyranase	gnl\|CDD\|183318	PRK11797, PRK11797, D-ribose pyranase; Provisional.	9.97421e-87

>NC_006155.1|WP_002215905.1|10999_11689_-|FadR-family-transcriptional-regulator
MQLNTQQQAAQRNLSYLLAEKIGQRILAGEYEAGSILPGEIELGEQFGVSRTAVREAVKMLAAKGMLLPRPRIGTRVMPQTNWNYLDQELLTWWMTKENFDQVMQHFLILRTSLEPQACYLAATHANEKQRELLASLVAEMRALHSNFNREQWIQVDTQFHKLIYEASGNPFLISFANLFSSVYYSYFRAITGDEVIKLQHHQNIVDTILAGDNQGALFACQVLLKTVD
>NC_006155.1|WP_002212250.1|9495_10920_-|multidrug-transporter-subunit-MdtD
MIKSARSMAGLPWIAAMAFFMQALDATILNTALPSIAESLNRSPLTMQSAIISYTLTVAMLIPVSGWLADRFGTRRIFILAVSLFTFGSLLCALSGSLAFLVASRVIQGIGGAMMMPVARLALIRAYPRSELLPVLNFVTIPGLVGPVMGPLLGGLLVTYTTWHWIFILNIPIGLLGIFYARKYMPNFTMPKRTFDFVGFLLFGISLVMISTSLEIMGRPEIADYLPAATLLGGLLMLIFYIFHAKGHPNPLIGLPLFKTRTFSVGIAGNVASRLGTGCVPFLMPLMLQVGFGYSALIAGCMMAPTAIGSIMAKSAVTQVLRSLGYRKVLVGITLIIGVLIASFALQSPGMSAWMMILPLFILGIAMSTQFTAMNTITLADLTDNNASSGNSVLAVTQQLSISFGIAISATVLRFYDGLSLGGNVDHFHYTFITMGIVTLLSSLVFLLLKPRDGDNLIQGRNVKKVAPQVKNNV
>NC_006155.1|WP_002215906.1|9328_9499_+|hypothetical-protein
MARAGLPIIAGYEVVSDFEFGGGLVALKQRLNNPEAEPQVLPLTPELIERGSVSLR
>NC_006155.1|WP_011191441.1|8349_9276_+|ribokinase
METGKLVVLGSINADHILNIEQFPRPGETVIGQQYNVAFGGKGANQAVAAGRSGADIAFIACVGDDDIGERVRQQLTADKIDTQPIEAIKGATTGVALIFVNSDGENVIGINAGANSAVTPEYLRRYQQQVIDADALLMQLESPLDTVIAAAKLAKQHQTQVILNPAPARKLPDELLTLVDMITPNETEAERLTGIHIEQDDDAAKAAQILHDKGIATVIITLGSRGVWLSEQGKGKLVAGFKVNAVDTIAAGDTFNGALLTALLEGQSMDAAVRFAHAAAAIAVTRPGAQPSIPWRAEIDSFLQERV
>NC_006155.1|WP_002212252.1|7879_8299_+|D-ribose-pyranase
MKKGVLLNADISAVISRLGHTDQIVIGDAGLPIPATTTRIDLALTRGVPGFLQVVDVVTQEMQVENAYLAEEIVKNNPQLHEALLVLLTQLEQRQENQIALRYISHEAFKEQTKQSRAVIRSGECSPFANIILGSGVTF
>NC_006155.1|WP_011191440.1|5806_7675_+|low-affinity-potassium-transporter-Kup
MSTEHKQSLSAVTLAAIGVVYGDIGTSPLYTLRECFSGHYGFDVRPDVVFGFLSLIFWMLILVVSVKYLTYVMRADNAGEGGILTLMSLAGRNTSSRATSILVVLGLIGGSFFYGEVVITPAISVMSAIEGLEIAAPALDPYIVPCSIAVLTLLFVIQKHGTGSVGKLFAPVMLVWFLTLALLGLRSIIANPEVLAALNPKWAISFFVEYKSVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPVINWTLYLAVVLVIIGFERSSNLAAAYGIAVTGTMVITSILFCTVAWKNWHWNRFLVAFLLMVLLIIDIPMFSANVLKLFSGGWLPLSLGLVMFIIMTTWKSERFSLLRRMHEHSNSLEAMIASLEKSPPVRVPGTAVYMSRAMNVIPFALLHNLKHNKVLHERVVLLTMRTDDVPYVHNVERVTIEQLSPTFWRVVARYGWRETPNVAEIFHRCGLEGLSCQMMETSFFMSHESLILTKRPWHLFLRGKLFIALSRNALRAPDQFEIPPNRVIELGTQVEI
>NC_006155.1|WP_011191439.1|3994_5533_-|ATPase-RavA
MAQSSQLAERISRLSHALESGLYERQEAIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFRHARAFEYLMTRFSTPEEVFGPLSIQALKEEGRYQRMTGGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGDREDSIPMRLLVTASNELPDADSSLEALYDRMLIRLWLDRVQEKQNFRSLLISRQNENHNPVAENLSITDEEFHQWQPLIDKITLPDHCFELIFQLRQRLSALEHAPYVSDRRWKKALRLLQASAFFSGRDEITPIDLILLKDCLWHDLNSFKLLQQQLEQLLTEQGYQQQSLLMKLQDINSKWLQHQQQQSDHQALTVVKQSGMFSRKAQYALPDNLTDSTLTLLLQKPLNLHDIQVNHLQVDKEALAQWLNKGGALRAKLNGVGYAQSIDAEIDDQLHIIILDVSRQPSTLSLPGATTTSVPPELLLALTKLESTLAEQRRLFSQHQPCLFTPSSWLAKIEASLLQVVEQLQFQQIQFQQRKFQQQKHSGH
>NC_006155.1|WP_002212255.1|2524_3991_-|ATPase-RavA-stimulator-ViaA
MLSLATLDMLLSISEGELIEEMVVGLLAAPQLAIFFEKFPRIKRALMKDIPGWKQNLQQRIREASVPPGLANEFSLYQQSLLEDSPQFYAHLPDIVAQLQDLHSPFATQAKTLVQTADLAKNPPGGDSLQTLFLQRWRVSLILQTITIHHQLLEQEREQLLAELQRRLALSGALEPILTTNDNAAGRLWDMSQGHLQRGDYQLLLQYGDFLQQQPELIRLAEQLGRSRSAKAQPAPDARYEPYTVMVRQPDSVPEEVSGIHQSNDILRLLPTELVMLGMSELEFEFYRRLLERRLLTYRLQGDNWQEKTQQRPVSLKQNDEQPRGPFIVCVDTSGSMGGFNEQCAKAFCLALLRIALADNRRCYIMLFATEIIHYELSADNGIEQAIRFLNQHFRGGTDLAACLANTLNKMEDREWYDADAVIISDFIAQRLPEELVRKIKIQQQAHQHRFHAVAMSAYGKPGIMRIFDHIWRFDTSLKSRLIRRWKR
>NC_006155.1|WP_002212256.1|1433_2426_+|aspartate--ammonia-ligase
MKKQFIQKQQQISFVKSFFSRQLEQQLGLIEVQAPILSRVGDGTQDNLSGSEKAVQVKVKSLPDSTFEVVHSLAKWKRKTLGRFDFGADQGVYTHMKALRPDEDRLSAIHSVYVDQWDWERVMGDGERNLAYLKSTVNKIYAAIKETEAAISAEFGVKPFLPDHIQFIHSESLRARFPDLDAKGRERAIAKELGAVFLIGIGGKLADGQSHDVRAPDYDDWTSPSAEGFSGLNGDIIVWNPILEDAFEISSMGIRVDAEALKRQLALTGDEDRLELEWHQSLLRGEMPQTIGGGIGQSRLVMLLLQKQHIGQVQCGVWGPEISEKVDGLL
>NC_006155.1|WP_002212257.1|802_1264_-|transcriptional-regulator-AsnC
MSEIYQIDNLDRSILKALMENARTPYAELAKNLAVSPGTIHVRVEKMRQAGIITAACVHVNPKQLGYDVCCFIGIILKSAKDYPSALKKLESLEEVVEAYYTTGHYSIFIKVMCKSIDALQQVLINKIQTIDEIQSTETLISLQNPIMRTIVP
>NC_006155.1|WP_002217538.1|19222_19753_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MNYKSPPLLGIAAYSGTGKTTLLKSLIPLLQQRQVRVGLIKHTHHNMEIDTPGKDSYELRKAGALQTLVASDCRWALMTETPEQQPLNLHYLASRLDASTIDLILVEGFKHEPINKIALYRESIGKPFSGLIDKHVIALASDKPIETTVKQLDINQPEQITEFICTWLENISFEVR
>NC_006155.1|WP_002213170.1|20494_20764_+|YihD-family-protein
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAASTEVIPGLKKDYEEDFKTALLRARGIIKD
>NC_006155.1|WP_002213169.1|20854_21841_+|serine/threonine-protein-kinase
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPERWSSEQITEEHQFSLDLAESEIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLLANCDLVPVKQRDKFLAAADLLITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRDQSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLQQTASFTEQVKLLQEPPLQLMPMY
>NC_006155.1|WP_002213168.1|21868_22492_+|thiol:disulfide-interchange-protein-DsbA
MKNVWLALVGIVMAFSVTAAQFTDGKQYLTLDKPVTGEPQVLEFFSFYCPHCYQFEEVYQVPKAVKKALPEGTKMTRYHVEFLGPLGKQLTQAWAVAMALGVEEKITPLMFEGVQKTQTVQTPGDIRNVFIKAGISGEDYDAALNSFVVKSLVAQQQKAAEDLQLRGVPAMFVNGKYMIKNDGMDTSSMDNYVKQYADVVTFLLTQK
>NC_006155.1|WP_011191443.1|22982_25781_+|DNA-polymerase-I
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLLLQYRPSHVAVVFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVKAMGLPLLVVSGVEADDVIGTLAREAEKAGHSVLISTGDKDMAQLVTPNITLINTMNNTILGPQDVCDKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLFSNLDKISTLTFRGAKTMSAKLEQNKDVAYLSYKLATIKTDVELDVTCDELTVSPPDDKQLHQLFSRYEFKRWLADVEAGKWLDSKKDRPTGQTSSQSFVAADTAPTAEVTAVLSQENYQTILDEKALADWIERLKAAEVFAFDTETDGLDTLSCNLIGMSFAVAPGEAAYLPLAHDYLDAPPQLDRDWVLATLKPLLEDDKALKVGQNLKFDKSMLARYGIDLKGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIAGKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPILSRIERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQAILYEKQKLPILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHTSYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPKGYCIMAADYSQIELRIMAHLSQDNGLLAAFAAGQDIHRATAAEVFGSPLEKVTTEQRRSAKAINFGLIYGMSAFGLARQLGIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNANRRKAAEREAINAPMQGTAADIIKRAMIAVDGWLQQEPEPLVRVIMQVHDELVFEVHESVLQSAEQKIRELMEKSMQLAVPLKVDVGVGANWDQAH
>NC_006155.1|WP_002213160.1|26188_26839_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MTIRNYNYHMTHFVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFEVVDGVRLVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRHPLKDLDQQMITWAVAVGTPVLLLLTKADKLASGARKAQLNLVREAIIPFMGDIQVEAFSSLKKIGVDKLREKLDTWFSEIPPEVMAEEFDGEGE
>NC_006155.1|WP_002213158.1|27603_28170_+|Der-GTPase-activating-protein-YihI
MKQPNKAPRANIAAPKGTATPKRRRKTRDELDAEARDRKRQKKHSGNRSGARTNVEGSNKKGHSQTQEKDPRVGSKVPVPLVIESQVKAKSMPKPVEKNVVKPRLTPEEELAKLENDERLDALLDRLDNDEVLNKEDQAYVDLTLDRIDALMEQLGIELGDDEDDVEREEKQEDILQLLKRGNPKDTF
>NC_006155.1|WP_002213155.1|28356_29730_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSEHAIVWDLSLIQKYNYSGPRYTSYPTALEFSEDYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIRQRAALFTGRQVSQMHWGGGTPTYLNKTQISHLMTVLREHFDFLPDAEQSIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEDFIFALIARAKALGFNSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPSLFAAQRKIKDADLPTAEQRLDILQHTIRFLTESGYQFIGMDHFARPDDELAIAQQEGTLHRNFQGYTTQGESDLLGLGVSAISMLGDSYAQNEKDLETYYACVEQRGNALWRGLTMTEDDCLRRDVIKTLICHFQLSYQPIEQRYGIRFADYFAEDFELLAPFEQDGLVERNETGLRVTPRGRLLIRNICMCFDIYLRKQARKQQFSRVI
>NC_006155.1|WP_011191444.1|29783_31196_-|nitrogen-regulation-protein-NR(I)
MQRGIVWIVDDDSSIRWVLERALTGAGLNCVAFDSGNQVLDALATRTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPARSQPVSGPTADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQVRQGRFEQADTGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVHLPPLRERSEDIPRLARYFLHVAAKELGVESKNLHPETEAALTRLPWPGNVRQLENTCRWLTVMAAGQEVLVQDLPSELFETHMPDASGQRAPDSWSTLLAQWADRALRSGHQDLLSEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME
>NC_006155.1|WP_002213151.1|31203_32253_-|nitrogen-regulation-protein-NR(II)
MATGTLPDAGQILNTLINSILLLDDDLAIHYANPAAQQLLAQSSRKLFGTPLPDLLGYFSLNIVLMRESLQAGQGFTDNEVTLVVDGRAHILSLTAQSLAEGFILLELAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLAKALPDPALLEYTQVIIEQADRLRNLVDRLLGPQRPGQHITQSIHQVAERVCQLVSLEKPDNVTLIRDYDPSLPELAHDPDQIEQVLLNITRNALQALGETGGTITLRTRTAFQVTLHGMRYRLAARIDIEDDGPGVPTQLQDTVFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFNSWPGHTEFSVYLPIRQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_2

123188-123300

Orphan

Consensus_repeat	Method
CTTCACTCGGCTGCTCAAATGTGCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_2

>merge|NC_006155|2|123188-123300|CRISPRCasFinder
CTTCACTCGGCTGCTCAAATGTGCTTTGGACGTCAACAACCCATTCAAAATCAAAAACGTATTAAAAGCCTAAGGATGATGGTCTGGCTTCACTCGCTGCTCAAATGTGCTTT

>NC_006155|2|2|123188-123300|CRISPRCasFinder
CTTCACTCGGCTGCTCAAATGTGCTTT	GGACGTCAACAACCCATTCAAAATCAAAAACGTATTAAAAGCCTAAGGATGATGGTCTG
GCTTCACTCGCTGCTCAAATGTGCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002215335.1\|129327_130104_+\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239782
NC_006155.1\|WP_011191467.1\|123719_126356_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|234570
NC_006155.1\|WP_002223919.1\|126729_127893_-\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|235346
NC_006155.1\|WP_011191465.1\|113468_115667_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514
NC_006155.1\|WP_011191466.1\|118175_119336_+\|cystathionine-gamma-synthase	unknown	unknown	gnl\|CDD\|169194
NC_006155.1\|WP_011191469.1\|130270_131644_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179883
NC_006155.1\|WP_011191474.1\|139022_139826_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|223880
NC_006155.1\|WP_002208936.1\|116676_117132_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227027
NC_006155.1\|WP_002208933.1\|122006_122891_+\|methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|181852
NC_006155.1\|WP_002208941.1\|111176_112022_-\|cell-division-protein-FtsN	unknown	unknown	gnl\|CDD\|237191
NC_006155.1\|WP_002208934.1\|119338_121774_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-II	unknown	unknown	gnl\|CDD\|236530
NC_006155.1\|WP_011191473.1\|137629_138958_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NC_006155.1\|WP_011191468.1\|128143_129148_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NC_006155.1\|WP_011191472.1\|135745_137554_+\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NC_006155.1\|WP_002216737.1\|115919_116135_+\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234576
NC_006155.1\|WP_004392248.1\|117480_117798_-\|met-regulon-transcriptional-regulator-MetJ	unknown	unknown	gnl\|CDD\|179982
NC_006155.1\|WP_011191470.1\|132242_134735_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273807
NC_006155.1\|WP_011191471.1\|134962_135580_+\|heme-acquisition-hemophore-HasA	unknown	unknown	gnl\|CDD\|368907
NC_006155.1\|WP_002216730.1\|112087_113116_-\|DNA-binding-transcriptional-regulator-CytR	unknown	unknown	gnl\|CDD\|182923
NC_006155.1\|WP_002208942.1\|110552_111077_-\|ATP-dependent-protease-subunit-HslV	unknown	unknown	gnl\|CDD\|235477

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002215335.1\|129327_130104_+\|acetylglutamate-kinase	gnl\|CDD\|239782	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).	2.52737e-136
NC_006155.1\|WP_011191467.1\|123719_126356_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|234570	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed.	0
NC_006155.1\|WP_002223919.1\|126729_127893_-\|acetylornithine-deacetylase	gnl\|CDD\|235346	PRK05111, PRK05111, acetylornithine deacetylase; Provisional.	0
NC_006155.1\|WP_011191465.1\|113468_115667_-\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NC_006155.1\|WP_011191466.1\|118175_119336_+\|cystathionine-gamma-synthase	gnl\|CDD\|169194	PRK08045, PRK08045, cystathionine gamma-synthase; Provisional.	0
NC_006155.1\|WP_011191469.1\|130270_131644_+\|argininosuccinate-lyase	gnl\|CDD\|179883	PRK04833, PRK04833, argininosuccinate lyase; Provisional.	0
NC_006155.1\|WP_011191474.1\|139022_139826_+\|energy-transducer-TonB	gnl\|CDD\|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	8.41417e-38
NC_006155.1\|WP_002208936.1\|116676_117132_-\|hypothetical-protein	gnl\|CDD\|227027	COG4682, COG4682, Predicted membrane protein [Function unknown].	3.96467e-66
NC_006155.1\|WP_002208933.1\|122006_122891_+\|methylenetetrahydrofolate-reductase	gnl\|CDD\|181852	PRK09432, metF, methylenetetrahydrofolate reductase.	0
NC_006155.1\|WP_002208941.1\|111176_112022_-\|cell-division-protein-FtsN	gnl\|CDD\|237191	PRK12757, PRK12757, cell division protein FtsN; Provisional.	2.3223e-148
NC_006155.1\|WP_002208934.1\|119338_121774_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-II	gnl\|CDD\|236530	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional.	0
NC_006155.1\|WP_011191473.1\|137629_138958_+\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.12924e-105
NC_006155.1\|WP_011191468.1\|128143_129148_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
NC_006155.1\|WP_011191472.1\|135745_137554_+\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NC_006155.1\|WP_002216737.1\|115919_116135_+\|50S-ribosomal-protein-L31	gnl\|CDD\|234576	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed.	4.16591e-39
NC_006155.1\|WP_004392248.1\|117480_117798_-\|met-regulon-transcriptional-regulator-MetJ	gnl\|CDD\|179982	PRK05264, PRK05264, met regulon transcriptional regulator MetJ.	1.36793e-81
NC_006155.1\|WP_011191470.1\|132242_134735_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.25236e-131
NC_006155.1\|WP_011191471.1\|134962_135580_+\|heme-acquisition-hemophore-HasA	gnl\|CDD\|368907	pfam06438, HasA, Heme-binding protein A (HasA). Free iron is limited in vertebrate hosts, thus an alternative to siderophores has been developed by pathogenic bacteria to access host iron bound in protein complexes. HasA is a secreted hemophore that has the ability to obtain iron from hemoglobin. Once bound to HasA, the heme is shuttled to the receptor HasR, which releases the heme into the bacterium.	1.23706e-101
NC_006155.1\|WP_002216730.1\|112087_113116_-\|DNA-binding-transcriptional-regulator-CytR	gnl\|CDD\|182923	PRK11041, PRK11041, DNA-binding transcriptional regulator CytR; Provisional.	0
NC_006155.1\|WP_002208942.1\|110552_111077_-\|ATP-dependent-protease-subunit-HslV	gnl\|CDD\|235477	PRK05456, PRK05456, ATP-dependent protease subunit HslV.	1.88144e-131

>NC_006155.1|WP_002208933.1|122006_122891_+|methylenetetrahydrofolate-reductase
MSFFHANQREALNQSLSELQGQINVSFEFFPPRTSEMEDTLWSSIDRLSTLKPKFVSVTYGANSGERDRTHSIIKGIKERTGLEAAPHLTCIDASPTQLRDIAIDYWNSGIRHIVALRGDLPPNSGKPEMYACDLVGLLKDVGDFDISVAAYPEIHPEAKSAQADLINLKRKIDAGANRAITQFFFDVESYLRFRDRCVATGIDVEIVPGILPVSNFKQLQRFATMTNVRVPNWMTSIFDGLDNDPETRKMVGASVAMDMVKILSREGVKDFHFYTLNRAELSYAICHTLGVRP
>NC_006155.1|WP_002208934.1|119338_121774_+|bifunctional-aspartate-kinase/homoserine-dehydrogenase-II
MNATAVAAAATGRQLHKFGGSSLADVKCYLRVANIMANYSHPGDLMVVSAAGSTTNQLISWLKLSQNDRLSAHQVQQSLRRYQHDLINGLLPPEMAEPLISEFIHDLERLAGLLDNKIDDVIYAEVVGHGEIWSARLMSALLNKLDMDAVWLDARRFLRAERAAQPQIDESRSYPLLQQLMAQHPHQRLVVTGFISRNEAGETVLLGRNGSDYSATQVGALAGAERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHTRTLQPVSGSDIDLQLRCSYQPEQGSTRIERVLASGLGAKIVTSHDDVCLIELQIASHHDFSLAQKEIDLLLKRAQIKPLATGIHPDRNLLQLCYTSEVVNSALRVLEDAALPGKLSLREGLALVALVGAGVSKNPLHSHRFYQQLKDQPVEFVWQAEDGISMVAVLRLGPTEHLIQGLHQSLFRAEKRIGLMLFGKGNIGARWLELFAREQKSLSARSGFEFVLAGVVDSRRSLLSYDGLDASRTLAFYNDEAKEQDEESLFLWMRAHPFDDLVVLDVTASPSLAEQYLDFASYGFHVISANKLAGASSSNNYRQIRDAFAKTGRHWLYNATVGAGLPVNHTVRDLRDSGDSILAISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRVDLSGQDVMRKLVILAREAGYDIEPNQVRVESLVPAGAESGSVDQFFENGEALNQQMIQRLEAAKEMGLVLRYVARFDANGKARVGVEAVRTDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDLNRLSQLL
>NC_006155.1|WP_011191466.1|118175_119336_+|cystathionine-gamma-synthase
MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFIDFNQPRTHDYSRRGNPTRDVVQRALAELEGGAGAVMTSSGMSAIHLVCTTFLQPGDLLVAPHDCYGGSYRLFDSLSKRGAYRVLFVDQGDEAALNRALAEKPKLVLIETPSNPLLRVVDIAAICQAARAAGALTVCDNTFLSPALQQPLSLGADLVVHSCTKYLNGHSDVVAGAVIAKDPELVVELAWWANNIGVTGAAFDSYLLLRGLRTLSPRMAQQQRNADDIVRYLQQQPLVKKLYHPSLPQHPGHEIACRQQSGFGAMLSFELDGDEQVMRRFLSALELFTLAESLGGVESLISHAATMTHAGMAAEARIAAGITDSLLRISVGIEDSEDLIADLDHAFQLAVTR
>NC_006155.1|WP_004392248.1|117480_117798_-|met-regulon-transcriptional-regulator-MetJ
MAEWNGEYVSPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLRHATNSELLCEAFLHAFTGQPLPNDEDLRKERSDEIPEAAKILMRELGVDPDTWEY
>NC_006155.1|WP_002208936.1|116676_117132_-|hypothetical-protein
MNPNYAKPSAAFTAASWSALLGGFVIFLIGLWNADMQLNERGYYFAVLILGLFSAVSLQKTVRDKLEGLAITSIYYGLCWVAFIVAVLLLCIGLWNATLALSEKGFYGVTFFMTLFGAIAVQKNTRDSAMSSDTESASLFKKVRDQLKAED
>NC_006155.1|WP_002216737.1|115919_116135_+|50S-ribosomal-protein-L31
MKQGIHPKYEQVTASCSCGNVIKINSTVGHDLNLDVCGECHPFYTGKQRDVASGGRVDRFNKRFSVPGAKK
>NC_006155.1|WP_011191465.1|113468_115667_-|primosomal-protein-N'
MSVVQVALPVPLARTFDYRLDSAMACPVVGARVSVPFGKRKAIGIVVGLSDTSTFPLEQLKTIDAILDNHSLFPPSLWRILCWATEYYHYPIGEVLFHALPILLRQGRPAQSAPLWQWFVTEQGRATPPESLKRAPKQQQALAALLQKPVYRHQVNEMALTESALQALRSKGLIDLRAQEATTTDWRHSFSVLGERLRLNTEQATAVGAIRSEDNQFAAWLLAGVTGSGKTEVYLSVLENILAQGRQALILVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARSGEAAIVIGTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEGIPIVMGTATPALETLHNVQMGKYRQLTLTKRAGSAKPAAQHLLDLKGLPLKVGLSQPLLKRMKTHLQAGNQVILFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNHRQLRCHHCDSQRPVPQQCPKCGSTHLVSVGVGTEQLENELAPLFPETPITRIDRDTTSRKGSLEQHLADVHQGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHPEHPLLQILLQQGYDAFAKQALEERKSVFLPPYTSHIIVRSEDHDNQQSALFLQQLRNLLEASPLKDEALWIMGPVPALQAKRGGRFRWQLLLQHPSRQLLQRLIKTSQPLISTLPQARKVKWTIDVDPIDS
>NC_006155.1|WP_002216730.1|112087_113116_-|DNA-binding-transcriptional-regulator-CytR
MENKKEFTMTTMKDVAEMAGVSTATVSRALMNPEKVSTVTRQKVEQAVLAVGYSPHALSRNIKRNESRTILVIVPDISDPFFADVIQGIEHAAAQQGYLILIGDCAQQTQQERTFVNLIITKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAYEAVNYLHELGHKRIACIAGPESLPLSHYRLQGYIQALRRNGITVDNDYIIRGDFSYEAGAQSFAALMELPHPPTAIFSHNDVMAVGAIWQAKQLGLRIPQDVSLVGFDDLKLSQFCDPPLTTVAQPRYQIGQQAMLLLLEQLQGHSVQSGSRLLDTELIIRESTAAPKH
>NC_006155.1|WP_002208941.1|111176_112022_-|cell-division-protein-FtsN
MAQRDYVSRGRSGARRKSTSRKKRSAPIVSKTVMALAVALLVVFVGGLYFITHNKPGELPLLPNHDPRTGNGLPPKPEERWRYIKELENRQIGVPMPTEPSAGGEVNAKTELTNEQRQLLEQMQADMRQQPTQLSEVPYNQGMQQVPRSAVTIKPPATSVQPQPVTPPRQTTIPVQPQAPAPVRTPPAAPVTQAVTPPKVEKEKEKTQRWMVQCGSFKAVDQAESIRAQLAFAGIESRITSGGGWNRVVLGPYNSKAAADKALQRLQGAGQSGCIPLSVGG
>NC_006155.1|WP_002208942.1|110552_111077_-|ATP-dependent-protease-subunit-HslV
MTTIVSVRRDGHVVIGGDGQVTLGNTVMKGNAKKVRRLYNNKVIAGFAGGTADAFTLFELFERKLEMHQGHLTKAAVELAKDWRTDRMLRKLEALLAVADETASLIITGNGDVVQPEDDLIAIGSGGPYAQSAARALLENTELGARDIVEKSLSIAGDICIYTNRFQTIEELTY
>NC_006155.1|WP_011191467.1|123719_126356_-|phosphoenolpyruvate-carboxylase
MNEQYSAMRSNVSMLGTLLGDTIKEALGEHILDRVETIRKLSKSSRAGNEASRQELLTTLQNLSNDELLPVARAFSQFLNLTNTAEQYHSISPHGEAASNPEALAQLFTRLKDKKLSDQDMRSAVDDLSIELVLTAHPTEITRRTLIHKLVEVNTCLSQLDHNDLADYERNKIMRRLRQLVAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWEGVPAFLREFNEQLENSLDYRLPVEAVPIRFTSWMGGDRDGNPNVTAEITRHVLLLSRWKATDLFLRDIQVLVSELSMSECTPELRELAGGEEVLEPYRQLMKNVRTQLTNTQAYLEARLKGERVLPPHDLLVSNDQLWEPLYACYQSLKACGMEIIANGQLLDTLRRVRCFGVPLVRIDVRQESTRHTDAIAELTRYLGLGDYESWSESDKQAFLVRELNSKRPLVPLKWEPSAETQEVLETCRVIAEAPQGSIAAYVISMAKVPSDVLAVHLLLKEAGCPFTLPVAPLFETLDDLNNADDVMTQLLGIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPEVTISSLALYAGAILEANLLPPPEPKKEWIEVMDLLSDASCDMYRSYVRENPEFVRYFRAATPELELGKLPLGSRPAKRRPDGGVESLRAIPWIFAWTQNRLMLPAWLGAGAGLQRAIDAGKRDVLATMCRDWPFFSTRIGMLEMVFAKADLWLAEYYDQRLVDKSLWPLGQQLRDQLAADIKVVLAIANDDHLMADLPWIAESIALRNVYTDPLNVLQAELLHRSRQQEHPDACVEQALMVTIAGVAAGMRNTG
>NC_006155.1|WP_002223919.1|126729_127893_-|acetylornithine-deacetylase
MKLPPFIELYRALIATPSISAADSALDQSNEALINLLAGWFADLGFRVEIQPVPDTRHKFNLLASIGENENGEGHGGLLLAGHTDTVPYDEGRWTRDPFTLTEHDHKLYGLGTADMKGFFAFILDAVRDIDASKLTKPLYILATADEETTMAGARYFAANTQLRPDFAIIGEPTSLQPVRAHKGHISNAIRITGQSGHSSDPARGVNAIDLMHESITQLMALRTTLQERYHNPAFTIPYPTMNFGHINGGDAANRICACCELHMDIRPLPGLTLSDLNELMTEALEPVSQRWPGRLSIDELHPPIPGYECPTDHHMVGVIEKLLGERTAVVNYCTEAPFIQQVCPTLVLGPGSINQAHQPDEFIDMAFIEPTRELIGQLVDHFCQQK
>NC_006155.1|WP_011191468.1|128143_129148_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MLNTLIVGASGYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSELHPQLKGILDLPLQPLVDVAQAAKGIDVVFLATAHEVSHDLAPQFLAAGCVVFDLSGAFRVRDAAFYSQYYGFEHQHPDWLDKAVYGLAEWQSEDIKQAQLIAVPGCYPTASQLALKPLVDGQLLNDAQWPVINAVSGVSGAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVAHLGTPVIFTPHLGNFARGILATITCRLKAGVTAQNIADAYHHAYQNKPLVRLYQQGVPALKAVVGLPFCDIGFSVQGEHLIIVATEDNLLKGAAAQAVQCMNIRFGFPETQSLL
>NC_006155.1|WP_002215335.1|129327_130104_+|acetylglutamate-kinase
MMNPLVIKLGGVLLDSEEALERLFTALVTYREKHERPLVIMHGGGCLVDELMKRLALPVVKKNGLRVTPADQIDIITGALAGTANKTLLAWAVKHQINAVGLCLADGNTVTVTLLDAELGHVGKAQPGSAALVQTLLAAGYMPIISSIGITVEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAQKAEQLIAQGIITDGMVVKVNAALDAARSLGRPVDIASWRHSEQLPALFNGVPIGTRISV
>NC_006155.1|WP_011191469.1|130270_131644_+|argininosuccinate-lyase
MALWGGRFSQAADQRFKQFNDSLRFDYRLAEQDIIGSVAWSKALVTVGVLNADEQQQLEQALSVLLEEVQANPHAILASDAEDIHSWVETKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKFQITELQTAVQQLQQALVMTAEANQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLSRDESRLQDTLKRLDVSPLGCGALAGTAYAIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSDASIGMVHLSRFAEDLIFFNSGEAAFVDLSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMTMTLKGLPLAYNKDMQEDKEGLFDALNTWLDCLHMAALVLDGIQVKRPRCKEAAEQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKALEALALSDLQQFSSVIGDDVYPILALQSCLDKRVAKGGVSPQQVASAIAEAKARLF
>NC_006155.1|WP_011191470.1|132242_134735_+|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MDNIIRDKKTIISVNKITTCILFALVTQSYSGQLAANTATIPTNNNDMALDKLNVEGKGNAHDSDWIYDEPRSVSEITREQLDNRPARHAADILEQTPGVYSSVSQQDPGLSINIRGIQDYGRVNMNIDGMRQNFMKSGHGQRNGSMYIDPEILSNVVIERGIFNGIGGAGAIGGIATFNTINASDFLAPEKELGGHIRAMTGDNGTRFIGSGALALGNPNGDILLAVSERNLKDYWPGNKGVLAGLRLYSPTRNVGDDLKNTKTLFTGYKMRSQLAKVGWNFEAGQRLEFSYLQTQIASPNASMLSEVLALSPSGKEITKIGWRNTSFTNVENRNIALDYRLNPEHISWLDATAKIYYVDTNDETDNANSLFKEYFWTQTRLKTRGLQLQNTNTFTPSDAHQIRLKYGLEWFSDKSEGYSTRKLIERTTPPGKRAITSTFAQLNYEYDDWLRLEGGLRYDQFRLKGNTWLHTRSFLQPYTFENPCDRRIHEQSEKPGSRCSSRRPATMRWDVDRREQQLSPTLAMGVKPGLEWLEFFGSYGKSWRPPAMTEVLATGTAHGYSWVLPNPFVAAERARTWEAGFNIQQSNLFIEDDHFAAKVAYFDTRIANYINLELGKAKPKFGGDSFTDVAYVNNLLKTRFRGLEYQLSYDAGTFYTNINYTRMIGVNNVCSPYAWLGGLQSVKYKYVGKVEQIYAVENEVANNYVTCMNANVLFGSSAYLPGDRGSLTLGSRIFDRRLDFGTVIRYNKGYQDRSAQDENGNPLTAYVADWPKYIVYDLYASYKVTNNLILRSSIENITNRAYLVNYGDTLSFAPSRGRTIQGGFEYKF
>NC_006155.1|WP_011191471.1|134962_135580_+|heme-acquisition-hemophore-HasA
MSTTIQYNSNYADYSISSYLREWANNFGDIDQAPAETKDRGSFSGSSTLFSGTQYAIGSSHSNPEGMIAEGDLKYSFMPQHTFHGQIDTLQFGKDLATNAGGPSAGKHLEKIDITFNELDLSGEFDSGKSMTENHQGDMHKSVRGLMKGNPDPMLEVMKAKGINVDTAFKDLSIASQYPDSGYMSDAPMVDTVGVMDSNDMLLAA
>NC_006155.1|WP_011191472.1|135745_137554_+|type-I-secretion-system-permease/ATPase
MESCKTPGASSVPPTILSVLAGNKKILWGIGLFTAVINLLMLAPAIYMLQVYDRVLASANTMTLLMLTVLVLGVFVFIGLLEWVRSAVVIRLGTQIDMQLNQPVFNAAFAANLKGHNTPAAQALNDLTVLRQFATGNALFAFFDAPWFPLYLLVIFLLHPWLGMLAAAGAGILVVLAWLNQWICKKPLHDASIITSHATQQANANLRNADVIEAMGMLKALRERWLMQHANFLYQQNLASDKSSRVTAVAKSSRQALQSMMLGLGALLVIYNEITAGVMIAGSILIGRVLGPIDQLIAVWKQWSHARLAYQRLSQLLAQHPSSPTGMVLPAPQGKLNVTQLMACKPGTHIPVLHSINFELQPGDVLGILGPSGSGKSTLAKLLVASQPAFSGTVRLDSADLSRWDKTQLGEFIGYLPQNIQLFRGTVAENIARFGAIDTAKVVAAAQLADVHDLILHLPQGYDTPLGDDGEGLSGGQRQRIALARAMYGIPRLIVLDEPNASLDKEGEQALLASIIQLKQQGCTIVMITHKPELLSGSDYLLFLKNGQMDLFDRTQAVLQNIQGKDKPAVQPEAKIRNSRSGWSNGVSYGIGPARTTSSPKP
>NC_006155.1|WP_011191473.1|137629_138958_+|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MLPESACYSVANANRQPPLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQSNLFQQQLDSVQLLAKDGYIAKNKLLEMESQLTSLQARVEQGTSDIAEAHKLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALAQHTVGGVVSSGQALMEIVPIGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPRLQGSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELAIRPGMAVDVFIRTGERSLLSYLFKPFTDRLHLALAEE
>NC_006155.1|WP_011191474.1|139022_139826_+|energy-transducer-TonB
MNRLQQSSEKLIFWLVGALLACGIHIYALWWLSTASIPAIPTSYPAAIMMELSAEPEFMQNLPQNSVVGITQNIIEPAVEQRINQPDDIVDLPTLPEQPEGQREITRKEPIKVKRPAENRATSRKPVNKETQESDSKQSSPAAAASAMLSGTSQQVAAAVNSDSSHRQQAQVSWKSRLQGHLMGFKRYPSSARKQQQQGTAMIRFVVDKNGYVSSVQLSNSSGTSALDREALAIIKRAQPLPKPPAELLSQGQITLSLPVDFNLKRK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_3

365854-365952

Orphan

Consensus_repeat	Method
GCGTGGGGTTTTTGCTGTGTGCGAAACACAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_3

>merge|NC_006155|3|365854-365952|CRISPRCasFinder
GCGTGGGGTTTTTGCTGTGTGCGAAACACAGAAATTACGCGTTTTACTGATAACCCCATGCCAAAGGCGTGGGGTTTTTGCTGTGTACGAAACACAGAA

>NC_006155|3|3|365854-365952|CRISPRCasFinder
GCGTGGGGTTTTTGCTGTGTGCGAAACACAGAA	ATTACGCGTTTTACTGATAACCCCATGCCAAAG
GCGTGGGGTTTTTGCTGTGTACGAAACACAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_012303442.1\|356224_356878_+\|DUF1481-domain-containing-protein	unknown	unknown	gnl\|CDD\|369329
NC_006155.1\|WP_011191553.1\|350852_351362_-\|sigma-D-regulator	unknown	unknown	gnl\|CDD\|225702
NC_006155.1\|WP_011191554.1\|351458_352241_+\|NAD(+)-diphosphatase	unknown	unknown	gnl\|CDD\|234699
NC_006155.1\|WP_001297096.1\|367715_368495_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
NC_006155.1\|WP_011191564.1\|375740_377057_+\|glutamate/aspartate:proton-symporter-GltP	unknown	unknown	gnl\|CDD\|183075
NC_006155.1\|WP_002210689.1\|355899_356175_+\|DNA-binding-protein-HU-alpha	unknown	unknown	gnl\|CDD\|138142
NC_006155.1\|WP_072080736.1\|369820_370834_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NC_006155.1\|WP_086025310.1\|366223_367323_+\|IS3-like-element-ISYpe1-family-transposase	unknown	unknown	gnl\|CDD\|372671
NC_006155.1\|WP_002230622.1\|355120_355711_+\|YjaG-family-protein	unknown	unknown	gnl\|CDD\|225610
NC_006155.1\|WP_011191555.1\|353237_354305_+\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|234644
NC_006155.1\|WP_071838981.1\|354334_355075_+\|deoxyribonuclease-V	unknown	unknown	gnl\|CDD\|236937
NC_006155.1\|WP_011191563.1\|372927_374886_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NC_006155.1\|WP_011191558.1\|357063_358350_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NC_006155.1\|WP_011191565.1\|377234_377867_-\|two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|185267
NC_006155.1\|WP_000255944.1\|368494_369517_-\|IS21-like-element-IS100-family-transposase	unknown	unknown	gnl\|CDD\|226950
NC_006155.1\|WP_002210685.1\|352333_353119_+\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002209030.1\|372559_372871_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NC_006155.1\|WP_011191562.1\|370907_372563_-\|cation/acetate-symporter-ActP	unknown	unknown	gnl\|CDD\|236495
NC_006155.1\|WP_011191559.1\|358409_359999_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NC_006155.1\|WP_011191566.1\|377879_380699_-\|two-component-system-sensor-kinase	unknown	unknown	gnl\|CDD\|237951

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_012303442.1\|356224_356878_+\|DUF1481-domain-containing-protein	gnl\|CDD\|369329	pfam07356, DUF1481, Protein of unknown function (DUF1481). This family consists of several hypothetical bacterial proteins of around 230 residues in length. Members of this family are often referred to as YjaH and are found in the Orders Vibrionales and Enterobacteriales. The function of this family is unknown.	5.62648e-99
NC_006155.1\|WP_011191553.1\|350852_351362_-\|sigma-D-regulator	gnl\|CDD\|225702	COG3160, Rsd, Regulator of sigma D [Transcription].	9.79228e-93
NC_006155.1\|WP_011191554.1\|351458_352241_+\|NAD(+)-diphosphatase	gnl\|CDD\|234699	PRK00241, nudC, NAD(+) diphosphatase.	9.7923e-170
NC_006155.1\|WP_001297096.1\|367715_368495_-\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	5.26232e-178
NC_006155.1\|WP_011191564.1\|375740_377057_+\|glutamate/aspartate:proton-symporter-GltP	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	0
NC_006155.1\|WP_002210689.1\|355899_356175_+\|DNA-binding-protein-HU-alpha	gnl\|CDD\|138142	PRK10753, PRK10753, DNA-binding protein HU-alpha.	2.50851e-45
NC_006155.1\|WP_072080736.1\|369820_370834_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.01462e-12
NC_006155.1\|WP_086025310.1\|366223_367323_+\|IS3-like-element-ISYpe1-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	9.29319e-29
NC_006155.1\|WP_002230622.1\|355120_355711_+\|YjaG-family-protein	gnl\|CDD\|225610	COG3068, COG3068, Uncharacterized protein conserved in bacteria [Function unknown].	2.9305e-125
NC_006155.1\|WP_011191555.1\|353237_354305_+\|uroporphyrinogen-decarboxylase	gnl\|CDD\|234644	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated.	0
NC_006155.1\|WP_071838981.1\|354334_355075_+\|deoxyribonuclease-V	gnl\|CDD\|236937	PRK11617, PRK11617, deoxyribonuclease V.	1.00906e-160
NC_006155.1\|WP_011191563.1\|372927_374886_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NC_006155.1\|WP_011191558.1\|357063_358350_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NC_006155.1\|WP_011191565.1\|377234_377867_-\|two-component-system-response-regulator	gnl\|CDD\|185267	PRK15369, PRK15369, two component system response regulator.	4.88575e-140
NC_006155.1\|WP_000255944.1\|368494_369517_-\|IS21-like-element-IS100-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.49492e-79
NC_006155.1\|WP_002209030.1\|372559_372871_-\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	1.68243e-49
NC_006155.1\|WP_011191562.1\|370907_372563_-\|cation/acetate-symporter-ActP	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NC_006155.1\|WP_011191559.1\|358409_359999_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NC_006155.1\|WP_011191566.1\|377879_380699_-\|two-component-system-sensor-kinase	gnl\|CDD\|237951	PRK15347, PRK15347, two component system sensor kinase.	0

>NC_006155.1|WP_011191559.1|358409_359999_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MQQRRPIRRALLSVSDKAGIIEFAQALSQRGIELLSTGGTARLLADAGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDGIMAQHGIQPIDIVVVNLYPFAQTVARPDCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYPAIITELDNNDGSLTYPTRFNLAIKAFEHTAAYDSMIANYFGTLVPPYHGDTEQPSGHFPRTLNLNYIKKQDMRYGENSHQQAAFYIEEDVKEASVATAQQLQGKALSYNNIADTDAALECVKEFSEPACVIVKHANPCGVAIGDSILAAYERAYQTDPTSAFGGIIAFNRELDAATANAIISRQFVEVIIAPTVSSDALALLAAKQNVRVLTCGQWQARSAGLDFKRVNGGLLVQERDLGMVTAADLRVVSKRQPTEQELRDALFCWKVAKFVKSNAIVYARDNMTIGIGAGQMSRVYSAKIAGIKAADEGLEVAGSAMASDAFFPFRDGIDAAAAVGITCVIQPGGSIRDDEVIAAADEHGIAMIFTDMRHFRH
>NC_006155.1|WP_011191558.1|357063_358350_-|phosphoribosylamine--glycine-ligase
MNILIIGNGGREHALGWKAAQSPLADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTLEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRMRSDLVELCLAGTQGKLNEKTSDWDERPSLGVVLAAGGYPADYRQGDVIHGLPQQEVKDGKVFHAGTKLNGNHEVVTNGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIGYRAIARGK
>NC_006155.1|WP_012303442.1|356224_356878_+|DUF1481-domain-containing-protein
MRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
>NC_006155.1|WP_002210689.1|355899_356175_+|DNA-binding-protein-HU-alpha
MNKTQLIDVIADKADLSKVQAKAALESTLAAITESLKEGDPVQLVGFGTFKVNHRNERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVKS
>NC_006155.1|WP_002230622.1|355120_355711_+|YjaG-family-protein
MLRNPIHLRLEKLESWQHLTFMACLCERMYPNYQQFCLETGFGDPAVYRRILDLIWETLVVKDAKVNFDSQLEKLEEAIPSSDDYAIYGVYPAIDACIALSEAIHSRLSGETLEHAIAISEASIRTVAMLEMTLAGKEMTDEELKILPAIEEEWDIQWEIFRLLADCEERDLDLIKGLRSDLREAAVSNIGINLTQ
>NC_006155.1|WP_071838981.1|354334_355075_+|deoxyribonuclease-V
MVKTKSRVETKSMFDTKALQAEQRQRASEISLHDGIDNQFVRFIAGADVGFEQHGEITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPALLAAWAQLQQRPDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLPLHQDVGAVQPLFDNDEQLGWVWRSKIRCNPLFISPGHRVSVGSALAWVQRCMAGYRLPEPTRWADAIASNRPQFQRWLRKNPDFLGKRRDMI
>NC_006155.1|WP_011191555.1|353237_354305_+|uroporphyrinogen-decarboxylase
MNELKNDRYLRALLRQPVDMTPVWMMRQAGRYLPEYKATRAIAGDFMSLCKNAELACEVTMQPLRRYPLDAAILFSDILTIPDAMGLGLYFETGEGPRFQSPITCRADVEKLPIPDPEQELGYVMNAVRTIRRELAGSVPLIGFSGSPWTLATYMVEGGSSKAFTKLKKMMYAEPQTLHLLLDKLADSVILYLNAQIKAGAQSVMIFDTWGGVLTGRDYHEFSLNYMHKIVDGLIRENEGRRVPVTLFTKGGGQWLEAMAATGCDALGLDWTTDIADARRRVGDKVALQGNMDPSVLYAPPARIEQEVSTILASFGQGEGHVFNLGHGIHQDVPPAHAGAFVNAVHALSRPYHQK
>NC_006155.1|WP_002210685.1|352333_353119_+|hypothetical-protein
MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKGNEVERRTTAVGIQKLYEEVLQELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQNIRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLKPEENYNFKMVNDVHENLHSIQTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDSLYLLLRGNSHQSPDDISSSVG
>NC_006155.1|WP_011191554.1|351458_352241_+|NAD(+)-diphosphatase
MELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGATARQIGEWQGQPVWLIRQMMPSGMGSVRQLLDVDRGLFQLAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQPWPFPHSLMMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLPPPGTVARRLIEDTVVLCREHSDLSQ
>NC_006155.1|WP_011191553.1|350852_351362_-|sigma-D-regulator
MLNRLESLTQRVGGSNELIDQWLHARKELLVSYCTVIGIKPQKEKHTPLNAKTLENFCHNLVDYLSSGHFHIYDRIIKEVEGASSPKMALTAKIHPALKNNTQTIMAFHDRYTNIEIDDDSCTEYQQALSDIGEALDARFKLEDQLIQWAAESWQAAQLADADKKSQVN
>NC_006155.1|WP_086025310.1|366223_367323_+|IS3-like-element-ISYpe1-family-transposase
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGVTELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKFLRPLQKRDAVEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPYSSLNNLTPAEFARSHQKGPDL
>NC_006155.1|WP_001297096.1|367715_368495_-|AAA-family-ATPase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
>NC_006155.1|WP_000255944.1|368494_369517_-|IS21-like-element-IS100-family-transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>NC_006155.1|WP_072080736.1|369820_370834_+|dienelactone-hydrolase-family-protein
MNYQSSWLAGKYTDFALWRSDTRKILRQALLTPNSTITFSAEKIEQQDRGSYIAEKIALNITDESRVLGLLLTPKTKGPHPAIVLLHDHGSKFDIGKEKMIRPWGDSAKLASAQAWSDKFFSGKFVGDELAKRGYVVFSIDSIGWGDRGPMSYERQQALASNFFNLGRSLAGTMAYEDMRTVDFMTTLPSVDRKRIGVLGFSMGAYRAWQLAALSDQVAATAAISWFGNYKGLMTPDNNVLRGQSSFYMLHPGIANKLDFPDIASLAAPRPMLLFNGGKDKLFPAQAVEQAYDKVHAIWRSQNAEPRLVTRSWPTLGHVFYQEQQDVVFLWLDRWLK
>NC_006155.1|WP_011191562.1|370907_372563_-|cation/acetate-symporter-ActP
MKIRHWSALSLFVLPALAQAEALTGEVHRQPLNIQAIVMFLLFVGGTLYITYWASKRTRSRQDYYTAGGRITGFQNGLAIAGDYMSAASFLGISALVYASGYDGLIYSIGFLIGWPIILFLIAERLRNLGRYTFADVASYRLQQRPIRTLSACGSLVVVALYLIAQMVGAGKLIQLLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVMLLSGATFMAIMVMKSVNFNFNTLFSEAVKVHPKGLSIMSPGGLVSDPISALSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVGPNQTFKDAAGALLGGNNMAAVHLANAVGGSFFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANERDELRVSKITVIILGIVAIGLGILFEKQNIAFMVGLAFSIAASCNFPIIIISMYWDKLTTRGAMIGGWLGLSTAVILMILGPTIWVTILGHEKPIYPYEYPALFSMIAAFVGTWFFSITDNSETGKQERLLFKSQFVRSQTGLGASKGGAH
>NC_006155.1|WP_002209030.1|372559_372871_-|DUF485-domain-containing-protein
MNDSIYQEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSSVTRGIPVGVGLIVTSFILTGIYVIRANGEFDRLTAEIIREVKQ
>NC_006155.1|WP_011191563.1|372927_374886_-|acetate--CoA-ligase
MSQIHKHPIPAAIAEHALITPEKYQHYYQQSVQNPDEFWGEQGKIIDWIKPYKTVKNTSFDPGHVSIRWFEDGTLNLAANCLDRHLAERGDQTAIIWEGDDPNQSKTVTYKQLHHDVCQFANVLKSLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPDAVAGRIIDSHSKLVITADEGIRAGRAIPLKKNVDEALKNPAITSIKNVVVFQRTGNASYWEDGRDVWWHDLIKEASADCPPEEMNAEDPLFILYTSGSTGKPKGVVHTTGGYLVYAALTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGAITLMFEGVPNYPGVNRLSQVVDKHKVNILYTAPTAIRALMAEGDKAIEGTKRDSLRIMGSVGEPINPEAWEWYYNKIGNSKCPIVDTWWQTETGGFMITPLPGATELKAGSATRPFFGVQPALVDNLGNPQEGVAEGNLVITDSWPGQARTLFGDHDRFEQTYFSTFKGMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGVPHNIKGQAIYAYITLNHGEEPTPELYTEVRNWVRKEIGPLATPDILHWTDSLPKTRSGKIMRRILRKIATGDTSNLGDTSTLADPSVVEKLLEEKQSMQTPS
>NC_006155.1|WP_011191564.1|375740_377057_+|glutamate/aspartate:proton-symporter-GltP
MKSIKISLAWQILIALVLGILVGAVLHNQIESREWLVSNILSPAGDIFIRLIKMIVVPIVISTLIVGIAGVGDAKKLGRIGLKTIIYFEVITTIAIIIGITLANVFQPGVGIDMSALTVVDISQYEKTTEQVQSGSHSLVSTILSLIPANVFASMAKGDMLPIIFFSVLFGLGLSSLPKETKEPLLNVFKAVSESMFKVTHMIMRYAPIGVFGLISVTVANFGFASLIPLAKLVILVYAAILFFALVILGTVARLCKLRIWILIRILKDELILAYSTASSETVLPRIIEKMEAYGAPKAITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGIELSIGQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMARTALNVVGNALAVLVIAKWENQFDDKKAKAYEKALFAAEQTPANQS
>NC_006155.1|WP_011191565.1|377234_377867_-|two-component-system-response-regulator
MNTKLLIVDDHELIIHGIKNMLAAYPRYLIVGQADNGLEVYNLCRQTEPDMVILDLGLPGMDGLDVIIQLLRRWPAMKILTLTARNEEHYASRTFNSGALGYVLKKSPQQILMAAIQTVAIGKRYIDPALDASMVIKLTQGPANTPTVLTPRERQILKLITEGSCNRVIAAQLSISQKTVETHRLNMMKKLDVHKVAELIHWSYRLGLNV
>NC_006155.1|WP_011191566.1|377879_380699_-|two-component-system-sensor-kinase
MGKASSLVTRLTLLLGVTLTVIWLILIATTAFFSYENTRQILINELTHMASMRADLSNHQFEGAERDAASLISRRESLQSTSPLPEISIKHYDSCYIPFNLDSCNINQHKNDLWIIQAYGTAGQTYYLDSFIIKQKEGIVLFPPQKSSSDYLNQRRKDLLLLPKFPTHNNIYWGAPTYTPQGGWHVSVAVCDKVGTLAGFALKLNDLIAYNHPVEQRDINLLLDKNGELLPISQQATSSNQLHEILNQLKNSKLHDGWQQTPDYLVLRTQLKGPGWQQLVIYPRIGFAWEALKPALYQLPFALVILLLLTSVLSLLLRYYLAIPLWNFINIIGATGPQAMEPRLPINRIDELGHIARAYNNLLDTLNEQYDTLEMKVKERTLALAKAKRAAEQANRRKSDHLTTISHEIRTPLNGALGAVELLQNTPLDAGQMRLAETAHQCSLSLLAIINNLLDFSRIESGQMTLSLEKTALLPLLDQAMLTIHSQALSKSLALSTFISADIPLELELDTLRLRQILVNLLGNAVKFTPQGRIQLRVRRQNQTLCFTVEDTGCGIDVQHQQTIFQPFMQTSDHEQGTGLGLAIADNLAKMMGGHLTVFSEPGQGSCFSLCLPFNAITPPMPFHGELFAPQRLHAQLSAWGMTCQPELANQPSRYFVDNALCYLPGRLYANLKQYLQGAETEVLKSLPLQPWQMHILLVDDSETNRDITGMMLQQLGHQVTLADSGTTALAIGRQHRFDLVLMDIRMPVLDGLATTARWRHDPANIDSHCMITALSANASPDEQIKTSQAGMNHYLSKPVTLGQLAEMLDLTAQFQLERGVDLSPQLSEPQPLLDLADSALSLKLYQSLQVLIQQAKDAIENLPVLSHTLHTIKGCAGQAGLIELQDAVIQLEHALDTHETLTQQDIIQLDEIIHVLLQPPTTCESTFIISQGQSLMVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_4

1766036-1766157

Orphan

Consensus_repeat	Method
CTTAATGCCAATATTAATCGACATAATCAATTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_4

>merge|NC_006155|4|1766036-1766157|CRISPRCasFinder
CTTAATGCCAATATTAATCGACATAATCAATTGTAGTGGAGGGGGAGGATTGAGTTTTTTCCAAAAAAACATATTGCAGTATTAAATCTCTTAATGCCAATATTAATCGATATAATCAATTG

>NC_006155|4|4|1766036-1766157|CRISPRCasFinder
CTTAATGCCAATATTAATCGACATAATCAATTG	TAGTGGAGGGGGAGGATTGAGTTTTTTCCAAAAAAACATATTGCAGTATTAAATCT
CTTAATGCCAATATTAATCGATATAATCAATTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002213058.1\|1755299_1755980_-\|DUF2057-family-protein	unknown	unknown	gnl\|CDD\|179619
NC_006155.1\|WP_011192072.1\|1752541_1754596_+\|DNA-helicase-IV	unknown	unknown	gnl\|CDD\|182930
NC_006155.1\|WP_012105362.1\|1768794_1769532_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187594
NC_006155.1\|WP_002213017.1\|1773607_1773856_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|180851
NC_006155.1\|WP_011192074.1\|1767509_1768793_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	unknown	unknown	gnl\|CDD\|238430
NC_006155.1\|WP_002213038.1\|1765036_1765783_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180440
NC_006155.1\|WP_002213056.1\|1756295_1756712_+\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NC_006155.1\|WP_002213024.1\|1772254_1773043_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NC_006155.1\|WP_002213046.1\|1758812_1759142_-\|sulfurtransferase-TusE	unknown	unknown	gnl\|CDD\|225472
NC_006155.1\|WP_002213028.1\|1769547_1770786_+\|hydroxymethylglutaryl-CoA-synthase-family-protein	unknown	unknown	gnl\|CDD\|225959
NC_006155.1\|WP_002213036.1\|1766513_1766732_+\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_011192073.1\|1762465_1764883_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366708
NC_006155.1\|WP_002213054.1\|1756820_1757138_-\|heat-shock-protein-HspQ	unknown	unknown	gnl\|CDD\|184526
NC_006155.1\|WP_002213060.1\|1754656_1755121_-\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|179969
NC_006155.1\|WP_002213052.1\|1757198_1758389_-\|23S-rRNA-(cytosine(1962)-C(5))-methyltransferase-RlmI	unknown	unknown	gnl\|CDD\|185082
NC_006155.1\|WP_002228570.1\|1773129_1773570_+\|lipocalin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|372819
NC_006155.1\|WP_002213034.1\|1766995_1767520_+\|beta-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|223835
NC_006155.1\|WP_002213025.1\|1771499_1772252_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|235936
NC_006155.1\|WP_002213026.1\|1770778_1771498_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
NC_006155.1\|WP_002213049.1\|1758482_1758761_+\|acylphosphatase	unknown	unknown	gnl\|CDD\|184675

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002213058.1\|1755299_1755980_-\|DUF2057-family-protein	gnl\|CDD\|179619	PRK03641, PRK03641, DUF2057 family protein.	4.09411e-122
NC_006155.1\|WP_011192072.1\|1752541_1754596_+\|DNA-helicase-IV	gnl\|CDD\|182930	PRK11054, helD, DNA helicase IV; Provisional.	0
NC_006155.1\|WP_012105362.1\|1768794_1769532_+\|SDR-family-oxidoreductase	gnl\|CDD\|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	3.19775e-68
NC_006155.1\|WP_002213017.1\|1773607_1773856_+\|acyl-carrier-protein	gnl\|CDD\|180851	PRK07117, PRK07117, acyl carrier protein; Validated.	4.77778e-09
NC_006155.1\|WP_011192074.1\|1767509_1768793_+\|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein	gnl\|CDD\|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	2.45409e-137
NC_006155.1\|WP_002213038.1\|1765036_1765783_-\|SDR-family-oxidoreductase	gnl\|CDD\|180440	PRK06172, PRK06172, SDR family oxidoreductase.	1.01866e-70
NC_006155.1\|WP_002213056.1\|1756295_1756712_+\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.53332e-71
NC_006155.1\|WP_002213024.1\|1772254_1773043_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.49415e-40
NC_006155.1\|WP_002213046.1\|1758812_1759142_-\|sulfurtransferase-TusE	gnl\|CDD\|225472	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism].	2.4785e-71
NC_006155.1\|WP_002213028.1\|1769547_1770786_+\|hydroxymethylglutaryl-CoA-synthase-family-protein	gnl\|CDD\|225959	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism].	1.57028e-141
NC_006155.1\|WP_002213025.1\|1771499_1772252_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|235936	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated.	2.57932e-133
NC_006155.1\|WP_011192073.1\|1762465_1764883_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366708	pfam01565, FAD_binding_4, FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.	8.27787e-32
NC_006155.1\|WP_002213054.1\|1756820_1757138_-\|heat-shock-protein-HspQ	gnl\|CDD\|184526	PRK14129, PRK14129, heat shock protein HspQ; Provisional.	3.64231e-72
NC_006155.1\|WP_002213060.1\|1754656_1755121_-\|methylglyoxal-synthase	gnl\|CDD\|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	2.55286e-93
NC_006155.1\|WP_002213052.1\|1757198_1758389_-\|23S-rRNA-(cytosine(1962)-C(5))-methyltransferase-RlmI	gnl\|CDD\|185082	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI.	0
NC_006155.1\|WP_002228570.1\|1773129_1773570_+\|lipocalin-like-domain-containing-protein	gnl\|CDD\|372819	pfam13924, Lipocalin_5, Lipocalin-like domain. This family includes domains distantly related to lipocalins. However, they do contain the important GXW motif in the first strand. The protein in this family include aln5, which is involved in biosynthesis of alnumycin. The family also includes the ZFK protein from Trypanosoma brucei which is a protein kinase. This domain is at the C-terminus of that protein. The domain is also found as the C-terminal domain in StiJ a protein involved in producing stigmatellin. This domain has been assumed to catalyze a final cyclisation reaction.	5.67247e-46
NC_006155.1\|WP_002213034.1\|1766995_1767520_+\|beta-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|223835	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism].	1.09929e-42
NC_006155.1\|WP_002213026.1\|1770778_1771498_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.17502e-35
NC_006155.1\|WP_002213049.1\|1758482_1758761_+\|acylphosphatase	gnl\|CDD\|184675	PRK14426, PRK14426, acylphosphatase; Provisional.	1.02172e-54

>NC_006155.1|WP_002213038.1|1765036_1765783_-|SDR-family-oxidoreductase
MKKTILITGALSGIGNTATKLFSEMGYNVVFSGRRPEEGRVILDDLKRINKDVLYVNADMNSESDIKHLIEMTLERFGSLDVAVNCAGTVGETAEIQAVTQDNFHLVFNTNVLGTLLAMKYQIPVMVERGKGSIINISSIAGLVGLPSTGIYVASKHAIEGLTKTAALEVATTGVRINSISPGPVEGKMFDRFLGHDENNKKAFIEMMPNKRFTTQEEVAHTIVFLAEDNVTAITGQTITIDGGYTAQ
>NC_006155.1|WP_011192073.1|1762465_1764883_-|GNAT-family-N-acetyltransferase
MTTTLDIINSAKDLDPAEYRAFFLQSKAPLFYDLRFLIAAEQSPLLNVSKIFYLLARDEGRLIALVPLYLQEFRSADPLGLLIFSAKLSIESEERGLFSHIIHCTDTTIPTLSHDPSLYARIFDAITAIAQAELARYFCFLNVQDGVLLREAQRNGLNINYMVDKFSIELDAFPDFDSFAQALPKYRRYEMVRQLRIFNRSDAKVRILAPPFDNEIEKLARLYYLTTQRLGTPYYWPESQLAVFCRLCGDLVRLIVVEQNGQIVSGFICFEEDGALHFWSAGMDDESSDFSPYTLGVSAVYRYAFEKGINLIECGRLNSHIKTRLGFKPKRLYSIVSQDLGIPAATQTSLSQLKLASQLDGEVRLASHPAFDEWYLTSVWNGRGPTRRPAGIVRAATEADVIRTIVFAKERGMEVSVRGSGHNYVGCFLRVDTLMLDISGLKGLDIDSRHKRAIVESGVSSGQLCHALAAKGLAFPTGHVKEVGISGFLLGGGLGINCSQWGGMSVFNVQALDIVTADGRLRHVSETQEPDLFWAARGAGPCSFFVVTRFYLSCYSLPRVITNSLYTLPFTYLHDLLARLEDASPPTNLQVMVSVSPPTSGDTPAVLLNILAFTDSPQEAQALCESFETRLELPLTALAINQPSNFETIYEQFSSMVVSKRFYADNILTDNTQELVSILSRYLSDAPSRGALTTIFWRGVTTYPQAAFSAHGKFFVSTYAQWDDAKDDSVNKYWLKRMYDELQEIARSRYINEYDLETRAGETSKCFAAENWERLQRLRLEYDPDGVFVDVQQLEEHGDQPGANN
>NC_006155.1|WP_002213046.1|1758812_1759142_-|sulfurtransferase-TusE
MLEFEGRIIDTDAQGYLKNSTDWSEALAPVLAEQEGITLTEPHWEVVRFVRAFYQEFNTSPAIRMLVKAMAQKYGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI
>NC_006155.1|WP_002213049.1|1758482_1758761_+|acylphosphatase
MSKIYIVAYVYGVVQGVGFRYSTQRQAQQLGVTGYAKNCDDGSVEVVASGNPQAVERLMEWIRQGGPRGARVDRLLTEPYPPTPFETFSIRY
>NC_006155.1|WP_002213052.1|1757198_1758389_-|23S-rRNA-(cytosine(1962)-C(5))-methyltransferase-RlmI
MTVRLILAKGREKSLLRRHPWIFSGAVQRLEGDALSGETIDILDSQGKWLARAAYSPESQILARVWTFQQDEVIDCAFFIRRLQQAQNWRDWLAQRDGLNGYRLIAGESDGLPGITIDRFQNFLVLQLLSAGAEYQRETLVSALQHCYPECSIYDRSDVSVRKKEGLPLTQGLICGEMPPALLPISENGMQLFVDIQQGHKTGFYLDQRDSRLAARNYANGRRVLNCFSYTGAFAVAALMGNCQQVISVDTSQSVLDIAKQNIELNQLDLSKTEFVRDDVFQLLRSYRAQGEKFDLIIMDPPKFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPVDLFQKILADAALDAGHDIQFIEQFRQAADHPVIAAYPEGLYLKGFACRVM
>NC_006155.1|WP_002213054.1|1756820_1757138_-|heat-shock-protein-HspQ
MIASKFGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLRSSPWYHVVIEDDDGQPVHTYLAEAQLTYEDVDAHPEQPSLDELAASIRHQLQAPHLRN
>NC_006155.1|WP_002213056.1|1756295_1756712_+|CoA-binding-protein
MHDKDIADILKKVKTIALVGASDIPSRPSYRVMAYLLQQGYQVTPVNPKLAGELLLGQLVYAELADIPHAIDMVDVFRNSDAAYCIAQDAIAIGAKVLWLQIGVINEQAAILATDAGLQVVMDRCPKIELPRLGLEKG
>NC_006155.1|WP_002213058.1|1755299_1755980_-|DUF2057-family-protein
MKLGLVAGMLAVCFSFSSVAMTLKLTPEIDLLVVDGKNMSGSLLKGADSLELNSGMHQILFKVIKPLPTDPLVLYSSPPLIVVFNAHNTRSVAIKLPVINTLRDGHQFSKNPLYQLIGDNGHPLSVRHDVLRQDHLNNSTTLETVMAAYNVGKYNASVPAFAAIPPSPVSAVPGTTIPVAGVNTPHKTASLQGENVTEQMLQYWFLQANPETQKRFLIWAKKQPIH
>NC_006155.1|WP_002213060.1|1754656_1755121_-|methylglyoxal-synthase
MELTTRTIAARKHIALVSHDHCKKSLLAWVMENRDLLAQHELYATGTTGNLVQKATGIDVHCLLSGPMGGDQEVGALISEKKIDILIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNRSTADFLIGSTLFSSEVTIAIPDYDRYMQQRLDLK
>NC_006155.1|WP_011192072.1|1752541_1754596_+|DNA-helicase-IV
MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKRGIVWGELEFELPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCAEVLHKQVESIKRIEQQDKWFKRSELGQIQVMIREAFSALPMPVERLAAFESCRADYECCLRWLQQGRHSVERCNQQWTARMLEEYQDFFQNVETSPLNASQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEALPEQILLLAFGRQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDSQARRALLIQHWQQQCSEKKAQAKGWREWLTDELEWDVADGDFWQDKRLAARLASRLERWVGLMRMHGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWKTALKDEGAVDFSGLIHQAVNLLEKGRFVSPWKHVLVDEFQDISPQRAMLLAALRKQNKQTCLFAVGDDWQAIYRFSGAELSLTTAFSEHFGEGAECALDTTYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMILPDEQLEALLDKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQQADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAITRAKHQVWLLQDTARPSIFVSQLSELGALVQRKP
>NC_006155.1|WP_002213036.1|1766513_1766732_+|hypothetical-protein
MYLLQQIELCPDQILHAWKISQNPQVSEVFEIEVVSSEEDAEEAVLFWKAYFSSLGETVIDGRHVGDTFSRF
>NC_006155.1|WP_002213034.1|1766995_1767520_+|beta-hydroxyacyl-ACP-dehydratase
MKNTELNFLKTNFLFNQDITNELNTSFGQDIIKKMIPHREPFLMVDNVELINIECRLIKAIRRVDEKDPVFGGHFPNDPIYPGVLQQESMFQTALILMYFLLNETAIPPAEENIIHAVGTRVYDVFHLSAVRPGELMTIRCCITEYDTFLATAIVQITVNDQIVTVGKGEFHVF
>NC_006155.1|WP_011192074.1|1767509_1768793_+|beta-ketoacyl-[acyl-carrier-protein]-synthase-family-protein
MSSDRIVITGVAINTPIGDTLDLVGNNLLSGKSAIGYWRNFDTSNIYSKIGGQIPDYDIEGKLHAFSNRIPDIVLSRAEKVFKQTTKGVQLSVLMAMEAWLDAGLFEHIIDPFDCGIICGGHNLSDKYLLDQQKIFSDEPEFIDAFSGLNSLDTDHSSSVAQVLNTKGFAYLVGGTCATGNIAIQTAINAIKVDKKQVVAVVCPMASFHPMMLHSLTILEAICYSQYQDTPTKASRPYDINRSGFLPSEGGAVLILEQAEHAKNRGAKIYAELLGASVNSDANHLGDPSHEGQVRVIQDVLKKCNISPEQVDYVSAHATSTKLGDIVELKSIKRVFGSHAEKLIINAPKSLLGHTMWASGVVEAAIAIWQMRQGEFHQSHNIETLDPAVELNVCASGNIKKEVNIFLNNSFGMGGINSASLFSRYHG
>NC_006155.1|WP_012105362.1|1768794_1769532_+|SDR-family-oxidoreductase
MNLFISGGASGIGRSVVIAALSKGWNVGFSYHNNKEGAQQLLDIAVAEFPRQLCRAYQLDVIDSGAVEYVGDRLLVDFSNIDAVVCNAGIDLPGNLVSMTDEDWALVLNTNLTGTFYLIRYFLPLFLANKYGRIVTLSSLAKDGSSGQAAYAASKAGLVGLTKTTAKEYGHFGITANVVVPGLINTEIIGDDIKGIKNFFAQYAPVGRLGSPSEVAEVILFLVAKESSYVNGAVFNVTGGIDWVY
>NC_006155.1|WP_002213028.1|1769547_1770786_+|hydroxymethylglutaryl-CoA-synthase-family-protein
MNSIGIEKISIYPSSLALKLSELAQARGGDNKYIQESLMVIKRSLVPQWEDAVTLAVNSAKDMLNDQDRSDIGLFIIATESGLDQEKAISTWAHRYLGLPATCRVFELKSACHAGAAALKMAESWISSGLNRGKKVLLINVDISNNMICHGKMEYSLGAGAIALLISDNPVFAVIETGKSGIHTHEVTDVIRPLPWKEVAFDVEASLFSYMDGLENAFEEYCHQTPEARESTYFNYNLYHVPFPGISKEAHKVLLELQGLFGKEALATSFKQKVMPSLYYAQKIGATYCGSIFLSLFSLMVKAPEIKSGDRIGVYSYGSGSCAEYFSMQVGDQAVEIAQQQGAALDILLTQRKILDVAAYEQLENARSAQMQGKDYRLDGDNLQDWYTHHYSGSGLLILERIDNHLRRYRYA
>NC_006155.1|WP_002213026.1|1770778_1771498_+|enoyl-CoA-hydratase/isomerase-family-protein
MHEYVTVPIKFSPDSLADFENRFISALNDERYKVIVLIGGPTYFSMGMDLTYISTHYDADFVSQFCHILKMVRNSHKPVLAKVEGNVIAGGLALLSVVDFILSSDSASFSLPEVTFGITPTIAMSCLLERIRPHHLKYFVWSSSVISAKQALKWGLIDQINTLENLDQDIQVISNKLSRIPKSAIRESKLLLAEQYSFEESLDLGSHLLVERLNDAQTIEKIRHYLEDIKLFNDEYADD
>NC_006155.1|WP_002213025.1|1771499_1772252_+|enoyl-CoA-hydratase/isomerase-family-protein
MKKIYLRKSDEGIAFMHINDPVNKNAIDDEFCLQLHGIVDTIKQDKTIKVLILVGLPDIFCTGGTEAFLQSLITHYKTNIEHEYANHLKHFLNIPIPVIAAMEGSATGGGLVLGLYADILVAAEESRYGMSFMNMGFTPGMGSTAMSKEAFGYYTGFEMMVTGNYIRGSELKGKCCFNYILPRAMVMEKAIELATSIAEKPRHSLELLKKYMSIDRRKMLEETSTIEAFMHHIAFNQSNIEQQIQDNYTG
>NC_006155.1|WP_002213024.1|1772254_1773043_+|SDR-family-oxidoreductase
MLNNLSEMTVLVTGGTKGIGRATVESFVKAGAKVYGTYFWGDNLDELENHFSQYLNRPVFLQADISDEEITTQLIEKIAQENKKIDILILNAAFAPQFKDTYKFRGLLDSIEHNSWPLITYIDCIKQHFGQYPGYVVAITSEGHRSCHITGYDYVAASKAVLETLTKYIGARENIIINCISPGVVDTEAFELVFGKKAQAFIRKFDPDFIVSPEAVGNVSVALCSGLMDAVRGQVITVDNGRMFTDNFTKWIDMIETNFIEK
>NC_006155.1|WP_002228570.1|1773129_1773570_+|lipocalin-like-domain-containing-protein
MSNPNRNLFLGRWKLESCIGNSGGIHIYPIGREPFGMLIYTEQYMMVFISSVERTQFSTEDIRAIPSEQIVADFPKFETYCGHYIVNHDEKIVTHFIDNSKIPNQIGTQFRRYFSFEHEKLVLKSIDSLLLNDESWLFELVWNKQE
>NC_006155.1|WP_002213017.1|1773607_1773856_+|acyl-carrier-protein
MDRDHIASIVKKHIVNSIDGAKEHEIDLQKSMADYGASSLDIVSVVSGVMRELKIKIPRTELKNIKSINGLIDLFVTSSSES

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_5

1891010-1891277

Orphan

I-F

Consensus_repeat	Method
GTTCACTGCCGCACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	CRT

4 spacers

DEDDh

The CRISPR arrays of NC_006155_5

>merge|NC_006155|5|1891010-1891277|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCGCACAGGCAGCTTAGAAAAAGTAAGGCACAGAAGGTTGTCACAATGACAAGTTCACTGCCGCACAGGCAGCTTAGAAAACAATATTTTTTCCACTAATTATCATATTAGAGTTCACTGCCGCACAGGCAGCTTAGAAACTGGGCCTCGCTGCTAAAATGATCGTGCTCTTGTTCACTGCCGCACAGGCAGCTTAGAAATCAGGCTGGCGGCGAAATCACCACCTTTGCATGTTCACTGCCGCACAGGCAGCCCAATAA

>NC_006155|5|1|1891010-1891217|PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTAAGGCACAGAAGGTTGTCACAATGACAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACAATATTTTTTCCACTAATTATCATATTAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTGGGCCTCGCTGCTAAAATGATCGTGCTCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA

>NC_006155|5|5|1891010-1891277|CRISPRCasFinder
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTAAGGCACAGAAGGTTGTCACAATGACAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACAATATTTTTTCCACTAATTATCATATTAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTGGGCCTCGCTGCTAAAATGATCGTGCTCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	TCAGGCTGGCGGCGAAATCACCACCTTTGCAT
GTTCACTGCCGCACAGGCAGCCCAATAA

>NC_006155|5|1|1891010-1891277|CRT
GTTCACTGCCGCACAGGCAGCTTAGAAA	AAGTAAGGCACAGAAGGTTGTCACAATGACAA
GTTCACTGCCGCACAGGCAGCTTAGAAA	ACAATATTTTTTCCACTAATTATCATATTAGA
GTTCACTGCCGCACAGGCAGCTTAGAAA	CTGGGCCTCGCTGCTAAAATGATCGTGCTCTT
GTTCACTGCCGCACAGGCAGCTTAGAAA	TCAGGCTGGCGGCGAAATCACCACCTTTGCAT
GTTCACTGCCGCACAGGCAGCCCAATAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002211898.1\|1881838_1882666_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187576
NC_006155.1\|WP_011192122.1\|1878898_1880230_-\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|234853
NC_006155.1\|WP_164712627.1\|1898949_1899123_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_012413636.1\|1900618_1901041_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NC_006155.1\|WP_011192131.1\|1902256_1903099_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NC_006155.1\|WP_157131899.1\|1884045_1884336_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374732
NC_006155.1\|WP_011192124.1\|1884737_1885733_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NC_006155.1\|WP_002211911.1\|1899305_1900610_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NC_006155.1\|WP_002216312.1\|1887571_1888663_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570
NC_006155.1\|WP_011192129.1\|1895038_1898266_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
NC_006155.1\|WP_172601527.1\|1885729_1886419_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NC_006155.1\|WP_011192123.1\|1882972_1883629_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_012304241.1\|1893034_1894144_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187547
NC_006155.1\|WP_002217522.1\|1894577_1894895_+\|DUF496-family-protein	unknown	unknown	gnl\|CDD\|180070
NC_006155.1\|WP_011192127.1\|1891311_1892742_-\|exodeoxyribonuclease-I	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236979
NC_006155.1\|WP_002211896.1\|1880233_1881133_-\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234781
NC_006155.1\|WP_002231208.1\|1881415_1881463_-\|his-operon-leader-peptide	unknown	unknown	unknown
NC_006155.1\|WP_011192126.1\|1889122_1890514_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NC_006155.1\|WP_002211917.1\|1903130_1904408_+\|L-fuconate-dehydratase	unknown	unknown	gnl\|CDD\|239440
NC_006155.1\|WP_002216393.1\|1901468_1902209_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187626

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002211898.1\|1881838_1882666_+\|SDR-family-oxidoreductase	gnl\|CDD\|187576	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4. Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.54107e-68
NC_006155.1\|WP_011192122.1\|1878898_1880230_-\|histidinol-dehydrogenase	gnl\|CDD\|234853	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed.	0
NC_006155.1\|WP_012413636.1\|1900618_1901041_-\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	1.71432e-55
NC_006155.1\|WP_011192131.1\|1902256_1903099_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.24466e-106
NC_006155.1\|WP_157131899.1\|1884045_1884336_-\|hypothetical-protein	gnl\|CDD\|374732	pfam16695, Tai4, Type VI secretion system (T6SS), amidase immunity protein. Tai4 is a new form of autoimmunity protein for a type VI secretion system, T6SS. T6SS has roles in interspecies interactions, as well as higher order host-infection, by injecting effector proteins into the periplasmic compartment of the recipient cells of closely related species. Pseudomonas aeruginosa produces at least three effector proteins to other cells and thus has three specific cognate immunity proteins to protect itself. Tae4, or type VI amidase effector 4, in Enterobacter cloacae has a cognate Tai4 or type VI amidase immunity 4 protein. The effector is Tae4, pfam14113.	4.0065e-14
NC_006155.1\|WP_011192124.1\|1884737_1885733_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	2.16773e-72
NC_006155.1\|WP_002211911.1\|1899305_1900610_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.17308e-74
NC_006155.1\|WP_002216312.1\|1887571_1888663_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0
NC_006155.1\|WP_011192129.1\|1895038_1898266_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	2.82178e-126
NC_006155.1\|WP_172601527.1\|1885729_1886419_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	2.48712e-90
NC_006155.1\|WP_002211917.1\|1903130_1904408_+\|L-fuconate-dehydratase	gnl\|CDD\|239440	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NC_006155.1\|WP_011192127.1\|1891311_1892742_-\|exodeoxyribonuclease-I	gnl\|CDD\|236979	PRK11779, sbcB, exonuclease I; Provisional.	0
NC_006155.1\|WP_002217522.1\|1894577_1894895_+\|DUF496-family-protein	gnl\|CDD\|180070	PRK05423, PRK05423, DUF496 family protein.	5.26004e-59
NC_006155.1\|WP_012304241.1\|1893034_1894144_+\|SDR-family-oxidoreductase	gnl\|CDD\|187547	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs. SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.86643e-61
NC_006155.1\|WP_002211896.1\|1880233_1881133_-\|ATP-phosphoribosyltransferase	gnl\|CDD\|234781	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed.	6.63843e-161
NC_006155.1\|WP_011192126.1\|1889122_1890514_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	5.10909e-45
NC_006155.1\|WP_002216393.1\|1901468_1902209_+\|SDR-family-oxidoreductase	gnl\|CDD\|187626	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs. Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P).	1.05065e-117

>NC_006155.1|WP_011192126.1|1889122_1890514_+|APC-family-permease
MAHDATVAVGTNQTGTNNRVQLRKTLTLVQVVMMGLAYLQPMTIFDTFGIVSGLTDGHVATSYAIALIAVLFTAVSYGKLVKRFPSAGSAYTYAQKSISPNVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVGALVSLMTLFNLRGINIVANLNSVIVVVQVAIMVVFMGLLIHGVYQGEGAGTLVSARPFYSENAHLVPMITGATILCFSFLGFDGISSLSEETPNAGKVIPKAIFLTALIGGIIFIAVSYCLQLYFPNISRFTDPEASQPEIMLFVAGKFFQSVILCFSCVTVLASGMAAHAGVSRLLYVMGRDGVFPEKVFGYVHPKWRTPAINVLLVGGVALSAISFDLVTATALINFGALVAFTFVNLSVIAQFYVRERRNSTFKDHFNYLILPMIGAGTVGVLWVNLESSSMTLGLVWGAIGLSYMVWKTRAFRRALPQFTEEPAQL
>NC_006155.1|WP_002216312.1|1887571_1888663_+|oxidoreductase
MSANAIRVQVGPANYFSFPGAIDKLSEFYPQAALDKALWIYGERALAAAQDYLPKAFHGPQAVRAKFSTHCSQSTVADLVSAAGGDRQVVIGIGGGAVLDTAKVVARQLGVPLVAIPTIAATCAAWTPLSVWYNEAGQALNFEIFNDANHLVLVEPRIMLHAPVEYLLAGIGDTLAKWYEAVVLSPQPETLSLTVRLGLQAALEIRNVLLKQSEAALQAVAQGELTQDFLDVVDAIIAGGGMVGGLGERYTRVAAAHAVHNGLTLLPQTEHFLHGTKVAYGILVQTALLGQDEVLRSLIVAFNQLGLPTHLAALDVDINDREAIDRVIGRILKPGESIHYLPIALNSEKVWAAIEQVEIAAQH
>NC_006155.1|WP_172601527.1|1885729_1886419_-|sugar-ABC-transporter-ATP-binding-protein
MRDISLTLHQGEILGIAGLAGAGKTELCKALFGDTPSTLERGELSGKAWRPRSPDRSVAQGLALVPEERRKEGIFIDEGIPMNLSVAADDSFSRWSLFSRRQELSWAKELIERLGIRTSSPQQKLARLSGGNQQKVAIGKWLRGDAQVLIFDEPTKGVDIKAKQDLFSLIDQLAQQGKGIIYASGEFSELVGLCDRICVLWDGRIVAELNAAEVDEETLLLFSTGGTPQ
>NC_006155.1|WP_011192124.1|1884737_1885733_-|ABC-transporter-permease
MSKELPLPDVQSWRHQLFDFLYKWGMLLTVVALIALFGLASDNFLDPNNIINILRSIAIVTVIAIGVSISLSIGGFDLSVGSTASLANAVVVSLFVWYGFGTTGAIILTLLICTLVGLFNAFLIVVLKIPDMLATLASLFVIQGVAMTYSRGGSITQSMLLPSGDMAEGVIPEIFSALGQVPVIVLIMLAVTVVVQLYLSLTKHGRRMYAIGGNPQAARLAGIRTVRYRVLAYVLSAQLAALGGILLASRIGSSQVNAGSGYLMDAVAAAYIGFSLAGSGKPNAFGTLIGAIILGVLQNGLVMLSVPYYAMDIIKGLVLAMALALTYIQKR
>NC_006155.1|WP_157131899.1|1884045_1884336_-|hypothetical-protein
MQQKNNLENFALSICLAEGFPDGEINSEAFSAVGAYVELGAYPVEAYEEVSELAKKFLEKKYISKNGESKLTVMKCIDLSQSSELSAIKDKYTRHI
>NC_006155.1|WP_011192123.1|1882972_1883629_-|hypothetical-protein
MSNYINIARRIAKIILSPDSAIGLMHGVLSVPKDLGYLVYGYLDTDSRYLRETEHIRMAKAIRYGILQNHNFVKTIETVLGIFNKYVPKEKQESIYSRSMFSLAGRTAANSYIFGKMASIIAQRTAFLVTLQGGAAGNILLIGGMAERSVYTSRSLQRKNPEIYYALYPRNYDLLYFLIEPALEPFVEALQVRRNHGDAAFNKIIDMVENELKTKRAA
>NC_006155.1|WP_002211898.1|1881838_1882666_+|SDR-family-oxidoreductase
MKKVAIIGLGWLGMPLAQSLSRRGIDVVGSKTTPDGVDAARMSGINCYPLVLTPELICEPDDLAQLMAVDALVITLPASRTTAGGDHYFQAVQQVVDSALAFGVPRIIFTSSTSVYGETRGRIKESSPLQPVTVAGKTLMALEQWLHQLPHTSVDILRLAGLVGTDRHPGRFLAGKTGVKGGSQGVNLVHQEDVIAAIELLLNRPKGGHLYNLCAPIHPRKRDFYPACARALQLTPPEFAVEEQEGANREIDGSKICSELGFEYLYPDPSRMPLN
>NC_006155.1|WP_002231208.1|1881415_1881463_-|his-operon-leader-peptide
MNRVQFNHHHHHHPD
>NC_006155.1|WP_002211896.1|1880233_1881133_-|ATP-phosphoribosyltransferase
MLDKTRLRIAMQKSGRLSDESQELLSRCGIKINLQQQRLIAFAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGDDPRYFTLRRLDFGGCRLSLAAPLDAEYTGPQCLQDTRIATSYPHILKQYLDKQGVRFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMSVDKQQLIDRLMTRIQGVIQARESKYIMMHAPSERLDEIITLLPGAERPTILPLAGDKSRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME
>NC_006155.1|WP_011192122.1|1878898_1880230_-|histidinol-dehydrogenase
MQPTNFNTLINWQQCSEEQQKALLSRPAINASERITATVSDILDRVKAEGDSALRDFSQRFDHVQVADIRITASEIAAASARLSDDVKHAMAQAVRNIEIFHNAQKMPVVDVETQPGVRCQQITRPIASVGLYIPGGSAPLPSTVLMLGTPARIAGCQRVVLCSPPPIADEILYAAQLCGIQEVFQIGGAQAIAAMAFGSESVPKVHKIFGPGNAYVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPAFIAADLLSQAEHGPDSQVILLTPDAAIAQAVAVEVEQQLALLSRADIARQALESSRLIVTNDLQQCIDISNAYGPEHLILQIRQPEEIIDQIDNAGSVFMGDWSPESAGDYASGTNHVLPTYGYTSTYSSLGLADFVKRMTVQQLTPQGLLGLASTIETLAQAEQLTAHKNAVTLRVTALNNALTAVNKE
>NC_006155.1|WP_011192127.1|1891311_1892742_-|exodeoxyribonuclease-I
MSDKNKQPTFYVHDYETFGQRPALDRPAQFAGVRTDLDFNLVEEPLVIYCKPADDYLPQPEAVMITGITPQHALANGVNEAEFSRQIHQAFSVPGTCILGYNNIRFDDEVSRNIFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEGIVWPENDDGLPSFKLEHLTKANGVEHLQAHDAMSDVYATIAMAKLVKQAQPRLFDYLYQHRSKHKINALIDIAEMTPLVHVSGMFGAARGNTSWVAPLAWHPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQESAIPIKLVHINKCPVLAPAKTLLPENADRLGIDRQRCLQNLQLLRQNPQVREKVVALFAQAEPFAVTDDVDTQLYNGFFSDADRATMKIIQQTEPQNLPALDLTFQDPRLEALLFRFRARNYPNTLNNSEQQRWLQHRREALSPERVQDYVLQLEQFYNQYEDDKEKLALLKALFEYAKGLVS
>NC_006155.1|WP_012304241.1|1893034_1894144_+|SDR-family-oxidoreductase
MKKLLLTGATGFLGGAVLEKLLLASSDFNYLLLVRANTPEQGLMRIRENLEKFYLPNELINKININHVLLGDLAEPDSFINDVRIDDVTHVINCAAIASFGNNPLIWKVNVEGTLAFGKRMAQVAGLQRFVHVGTAMACTPEADTVVDERVLSTENDAHLVEYTKSKSAIECLLAEHCPTLPLVFARPSIVVGHTRLGCQPSSSIFWVFRMALMLRKFMCSLDDHIDVIPVDYCADALLYILEYPNLPDNIYHISAGEKGSVSFSEIDQAMSVAAKQKPVGVNYSQVEYTALVQMRNQLKGIFGPCNERLMLKAMRLYGSFAMLNVRFSNERLLSLGMPRTPRFTDYIARCVESSHGMTIQQQMAVDFK
>NC_006155.1|WP_002217522.1|1894577_1894895_+|DUF496-family-protein
MDNASKPTFQDVLEFVRMFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSEYIKPGMSIEEVQAIIANMRGDYEDRVDDYIIKNADLSKERRELSKKLKAMGEVK
>NC_006155.1|WP_011192129.1|1895038_1898266_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MSLYRISSLHQAKQLNKNKQLNKTRISKSVVWANIVIQAIFPLSIAFTPAVMAAETVGASDEKPRSASQAEQSTANAATRLASILTNDDSTKQASSIARGTAANAGNEALQKWFNQFGSAKVQLNLDEKLSLKGSQLDVLLPLTDSPDLLTFTQLGGRYIDDRVTLNVGLGQRHFFAQQMLGYNLFVDHDASYSHTRIGVGAEYGRDFINLAANGYVGVSGWKNSPDLDKYDEKVANGFDLRSEAYLPTLPQLGGKLIYEQYFGDEVGLFGVDNRQKNPLAVTLGVNYTPIPLFTVGVDHKMGRAGMNDTRFNLGFNYAFGTPLAHQLDSDAVAIKRSLMGSRYNLVDRNNQIVMKYRKQNRVTLELPARVSGAARQTMPLVANATAQQGIDRIEWEASALTLAGGKITGSGNNWQITLPSYLSGGEGNNTYRISAIAYDTLGNASPVAYSDLVVDSHGVNTNASGLTAAPEILPANASASSVIEFNIKDNANQPITGIADELAFSLELVELPEELAKAKARSVPLKTVSHTLTKITESAPGIYQATLTSGSKPQLINITAQINGVPLADVQTKVTLIADESTATLQTSSLQIITNGSLADDTDANQIRAVVVDAYGNKLSGVQVNFTVGNNAKITETTLSDKQGGVTAAITSTKAGTYTVTAELNGVTQQIDVNFIPDAGTATLDDSDEYKLQWVTNGQVADGESTNSVQLTVVDKFGNTVPGVDVAFTTDIGAIISEVTPTDANGVATAKIISSQAKSHTVKATLNRKEQTVEVNFIADTATAEITANNFTVEVDGQVAGSGTNQVQALVVDKKGNPVANMTVNFTATNGVVAETTSAKTDENGKVTTNLSMTNVGGTISTVTATMINSANVTSTQDKPVIFYPDFTKATLNTPANTYSGFNINSGFPTTGFKNTHFQLSPHGITGANSDYDWVSSHPNVSVSNTGAITLQDNPGGKVTITATWKHDSSKVFTYDFTLNYWVGLYSSTNLSWAQANASCINAGMRLPTNSEVSAGQDVRGVGSLFGEWGNLNAYPSFPTAQIIWTSVDTNDFHIDTGLTHSASNVTLAYMCIK
>NC_006155.1|WP_164712627.1|1898949_1899123_-|hypothetical-protein
MCRKSLNQPFYDGHMNDNHMNDSHGVDTGSALSTALASFPLSRLYPSYFTLPVRWLR
>NC_006155.1|WP_002211911.1|1899305_1900610_+|MFS-transporter
MSNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFALGAGIFFAAYALFGIPANLMMNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLLGVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALTLGSPISGALLDMQGFLGQPGWFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAVLLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYYIPRYADRKTHRRNPIATLNLVVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFPAQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNSPPAGLITLALFSLLSATLIFSLKFWPAKATAEVI
>NC_006155.1|WP_012413636.1|1900618_1901041_-|thiol-disulfide-oxidoreductase-DCC-family-protein
MSAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAELPTDKINTLVLIENQQVYLRSEAIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYRLFGRYDAVRKLKADHERRFL
>NC_006155.1|WP_002216393.1|1901468_1902209_+|SDR-family-oxidoreductase
MNLKGKKALVTAAGQGIGFNTATLFARKGAEVIASDINIAALSNIPGITAVSLDVTDTLAINDVAQAIGPIDVLFNCAGVVHSGDILTCSEQEWQFALDLNVTAMFHMIRAFLPGMIACQQGSIINMSSVASSIKGVPNRFAYSTSKAAVIGLTRSVAADYVTQGIRCNAICPGTVESPSLRQRIAVQAHAEGRSEADVFQAFAARQPIGRIGKAEEIAQLALYLASDASAYTTGTIHIIDGGWSN
>NC_006155.1|WP_011192131.1|1902256_1903099_+|fumarylacetoacetate-hydrolase-family-protein
MKLLRYGPVGEERPALLDELGEIRDLSAHIEDISGKFLLPATLYKLRQLDSASLPLVRGEQRLGACVGHVGKFICVGLNYADHAAETGAEIPQEPVIFNKWTSAIIGPNDDIEIPRNSVKTDWEVELGVVIGTGGRYIGEANAMSHVAGYCVVNDISEREFQLEHGGTWDKGKGCDTFGPIGPWLVTRDEIPDPHQLGLWLDVDGRRYQNGSTRTMIFKIPQIISYLSRFMSLQSGDVISTGTPPGVGLGQKPPVYLHAGQIMRLGIEGLGEQCQKTIQA
>NC_006155.1|WP_002211917.1|1903130_1904408_+|L-fuconate-dehydratase
MTIITALRTEDVRFPTSLELDGSDAMNPDPDYSAAYVILDTDNPALSGHGLTFTIGRGNEICCVAIHALEHLIVGRDLASMTANMGKFWREFTSDSQLRWIGPEKGAIHLATGAVINAVWDLWSKAEGKPLWRLVADMSPEELVRCIDFRYITDCITPEEALTLLQQRAHNKALRLEKLQDEGYPCYTTSAGWLGYPDDKLRRLCQDAVDAGFDYLKLKVGRDLEDDIRRVRITREVLGPDRKLMIDANQIWETNEAIPWVNQLAFANPWFIEEPTNPDDIEGHRRIRQGVAPVKVATGEMCQNRIMFKQFIMREAIDVVQIDACRLGGVNEVLAVMLMAAKYDLPVCPHAGGVGLCEYVQHLAMIDYLCIAGTDKGRVIEYVDHLHEHFVHPCVIKNAAYMPPEQPGFSIEMHQSSIEKYRFRV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_6

2964428-2965418

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CRT
TTCACTGCCGCACAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCGCACAGGCAGCTTAGAAA	PILER-CR

16 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NC_006155_6

>merge|NC_006155|6|2964428-2965418|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TTTGATTATTGCCTGTGCGGCAGTGAACCCCAGCGTCGGGTCGGATACTTGCCACGTAACTTTCTAAGCTGCCTGTGCGGCAGTGAACTAGAGTGTTTTTTCTGACGATGTTCCTTGCTGTTTCTAAGCTGCCTGTGCGGCAGTGAACCCAGAGCCTCCTGATACATCTGATCCCACAGTTTTCTAAGCTGCCTGTGCGGCAGTGAACCATCACAATGCTCTGGATGACGCAATTCATCATTTCTAAGCTGCCTGTGCGGCAGTGAACTGATTTTGATTATCCTATGCCAGCCGAATATAGTTTCTAAGCTGCCTGTGCGGCAGTGAACTAAAGACCGTTGAATTTAAACAAGGTATCAACTTTCTAAGCTGCCTGTGCGGCAGTGAACTGAAAGGGATCGGGCTGAATGCGCAAGACGCGTTTCTAAGCTGCCTGTGCGGCAGTGAACAGTCAGGGCTATGAGGGGGCTGCAATGGGCGCGTTTCTAAGCTGCCTGTGCGGCAGTGAACGTTTTTTCGACCTTTTCCTCCATCAGCGAGGCTTTCTAAGCTGCCTGTGCGGCAGTGAATACCGTTATTAATGGGTGGCGCTGGCGCTTCATTTTCTAAGCTGCCTGTGCGGCAGTGAACACGTGGCTAGTTATTACGATACAATTAATCTCTTTCTAAGCTGCCTGTGCGGCAGTGAACGCTGCTTTCTTGTCAATCCCTGACGGGTTCTTTTTCTAAGCTGCCTGTGCGGCAGTGAACATCTCCGGAGAGTTCAACTGTGGGGTGGTGTATTTCTAAGCTGCCTGTGCGGCAGTGAACTTAAGCATCACACAGCCGATGGTGTGGTTGATTTTCTAAGCTGCCTGTGCGGCAGTGAACCCGGATAGCGAAACTTAATGAAAATATTATCGCTTTCTAAGCTGCCTGTGCGGCAGTGAACACCAGTTGTACATGTGTCAGTTTGTCGACTCTTTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NC_006155|6|6|2964428-2965418|CRISPRCasFinder
TTTGATTATTGCCTGTGCGGCAGTGAAC	CCCAGCGTCGGGTCGGATACTTGCCACGTAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAGAGTGTTTTTTCTGACGATGTTCCTTGCTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCAGAGCCTCCTGATACATCTGATCCCACAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CATCACAATGCTCTGGATGACGCAATTCATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGATTTTGATTATCCTATGCCAGCCGAATATAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAAGACCGTTGAATTTAAACAAGGTATCAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGAAAGGGATCGGGCTGAATGCGCAAGACGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGTCAGGGCTATGAGGGGGCTGCAATGGGCGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTTTTTTCGACCTTTTCCTCCATCAGCGAGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAT	ACCGTTATTAATGGGTGGCGCTGGCGCTTCAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACGTGGCTAGTTATTACGATACAATTAATCTC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGCTTTCTTGTCAATCCCTGACGGGTTCTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCTCCGGAGAGTTCAACTGTGGGGTGGTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTAAGCATCACACAGCCGATGGTGTGGTTGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCGGATAGCGAAACTTAATGAAAATATTATCGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACCAGTTGTACATGTGTCAGTTTGTCGACTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NC_006155|6|2|2964428-2965418|CRT
TTTGATTATTGCCTGTGCGGCAGTGAAC	CCCAGCGTCGGGTCGGATACTTGCCACGTAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAGAGTGTTTTTTCTGACGATGTTCCTTGCTG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCAGAGCCTCCTGATACATCTGATCCCACAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CATCACAATGCTCTGGATGACGCAATTCATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGATTTTGATTATCCTATGCCAGCCGAATATAG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TAAAGACCGTTGAATTTAAACAAGGTATCAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TGAAAGGGATCGGGCTGAATGCGCAAGACGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	AGTCAGGGCTATGAGGGGGCTGCAATGGGCGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GTTTTTTCGACCTTTTCCTCCATCAGCGAGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAT	ACCGTTATTAATGGGTGGCGCTGGCGCTTCAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACGTGGCTAGTTATTACGATACAATTAATCTC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGCTTTCTTGTCAATCCCTGACGGGTTCTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCTCCGGAGAGTTCAACTGTGGGGTGGTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTAAGCATCACACAGCCGATGGTGTGGTTGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCGGATAGCGAAACTTAATGAAAATATTATCGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACCAGTTGTACATGTGTCAGTTTGTCGACTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

>NC_006155|6|2|2964488-2964996|PILER-CR
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTAGAGTGTTTTTTCTGACGATGTTCCTTGCTG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CCCAGAGCCTCCTGATACATCTGATCCCACAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CCATCACAATGCTCTGGATGACGCAATTCATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTGATTTTGATTATCCTATGCCAGCCGAATATAG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTAAAGACCGTTGAATTTAAACAAGGTATCAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTGAAAGGGATCGGGCTGAATGCGCAAGACGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CAGTCAGGGCTATGAGGGGGCTGCAATGGGCGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CGTTTTTTCGACCTTTTCCTCCATCAGCGAGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAATACCGTTATTAATGGGTGGCGCTGGCGCTTCATTTTCTAAGCTGCCTGTGCGGCAGTGAACACGTGGCTAGTTATTACGATACAATTAATCTCTTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGCTTTCTTGTCAATCCCTGACGGGTTCTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCTCCGGAGAGTTCAACTGTGGGGTGGTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTAAGCATCACACAGCCGATGGTGTGGTTGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCGGATAGCGAAACTTAATGAAAATATTATCGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACCAGTTGTACATGTGTCAGTTTGTCGACTCT


>NC_006155|6|3|2965090-2965418|PILER-CR
	CTAGAGTGTTTTTTCTGACGATGTTCCTTGCTG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CCCAGAGCCTCCTGATACATCTGATCCCACAGT
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CCATCACAATGCTCTGGATGACGCAATTCATCA
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTGATTTTGATTATCCTATGCCAGCCGAATATAG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTAAAGACCGTTGAATTTAAACAAGGTATCAAC
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CTGAAAGGGATCGGGCTGAATGCGCAAGACGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CAGTCAGGGCTATGAGGGGGCTGCAATGGGCGCG
TTTCTAAGCTGCCTGTGCGGCAGTGAA	CGTTTTTTCGACCTTTTCCTCCATCAGCGAGGC
TTTCTAAGCTGCCTGTGCGGCAGTGAATACCGTTATTAATGGGTGGCGCTGGCGCTTCATTTTCTAAGCTGCCTGTGCGGCAGTGAACACGTGGCTAGTTATTACGATACAATTAATCTCTTTCTAAGCTGCCTGTGCGGCAGTGAAC	GCTGCTTTCTTGTCAATCCCTGACGGGTTCTT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ATCTCCGGAGAGTTCAACTGTGGGGTGGTGTA
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	TTAAGCATCACACAGCCGATGGTGTGGTTGAT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	CCGGATAGCGAAACTTAATGAAAATATTATCGC
TTTCTAAGCTGCCTGTGCGGCAGTGAAC	ACCAGTTGTACATGTGTCAGTTTGTCGACTCT
TTTCTAAGCTGCCTGTGCGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002210200.1\|2975643_2976684_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380502
NC_006155.1\|WP_011192627.1\|2959800_2963091_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NC_006155.1\|WP_002216551.1\|2952415_2952625_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002210197.1\|2972276_2973101_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NC_006155.1\|WP_012413791.1\|2963087_2964068_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NC_006155.1\|WP_011192625.1\|2957351_2958302_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|187807
NC_006155.1\|WP_002230953.1\|2968871_2969987_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_011192632.1\|2971074_2972130_-\|glycosidase	unknown	unknown	gnl\|CDD\|350124
NC_006155.1\|WP_011192634.1\|2974085_2975372_-\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NC_006155.1\|WP_011192630.1\|2967558_2968833_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002210201.1\|2976700_2978089_+\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|185312
NC_006155.1\|WP_011192623.1\|2954667_2955687_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
NC_006155.1\|WP_011192621.1\|2952748_2954107_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NC_006155.1\|WP_011192629.1\|2965755_2967000_+\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|223740
NC_006155.1\|WP_002211866.1\|2955764_2956319_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|378224
NC_006155.1\|WP_011192633.1\|2973101_2973977_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NC_006155.1\|WP_011192626.1\|2958298_2959645_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|187866
NC_006155.1\|WP_011192624.1\|2956329_2957334_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NC_006155.1\|WP_011192631.1\|2970109_2971048_-\|DUF1861-family-protein	unknown	unknown	gnl\|CDD\|378102
NC_006155.1\|WP_011192622.1\|2954153_2954657_+\|formaldehyde-activating-enzyme	unknown	unknown	gnl\|CDD\|224708

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002210200.1\|2975643_2976684_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380502	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group includes the ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria. This group belongs to the LacI-GalR family repressors and are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.	1.56156e-83
NC_006155.1\|WP_011192627.1\|2959800_2963091_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NC_006155.1\|WP_002210197.1\|2972276_2973101_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.72016e-69
NC_006155.1\|WP_012413791.1\|2963087_2964068_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NC_006155.1\|WP_011192625.1\|2957351_2958302_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|187807	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	3.02239e-153
NC_006155.1\|WP_011192632.1\|2971074_2972130_-\|glycosidase	gnl\|CDD\|350124	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase. This subfamily contains the glycosyl hydrolase family 130 (GH130), as classified by the carbohydrate-active enzymes database (CAZY), enzymes that are phosphorylases and hydrolases for beta-mannosides, and includes Listeria innocua beta-1,2-mannobiose phosphorylase (Lin0857). hey possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Structure of Lin0857 shows beta-1,2-mannotriose bound in a U-shape, interacting with a phosphate analog at both ends. Lin0857 has a unique dimer structure connected by a loop, with a significant open-close loop displacement observed for substrate entry. A long loop, which is exclusively present in Lin0857, covers the active site to limit the pocket size.	1.45937e-164
NC_006155.1\|WP_011192634.1\|2974085_2975372_-\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	1.65098e-50
NC_006155.1\|WP_002210201.1\|2976700_2978089_+\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|185312	PRK15414, PRK15414, phosphomannomutase.	0
NC_006155.1\|WP_011192623.1\|2954667_2955687_+\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	1.53228e-143
NC_006155.1\|WP_011192621.1\|2952748_2954107_+\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.46299e-50
NC_006155.1\|WP_011192629.1\|2965755_2967000_+\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	3.06937e-32
NC_006155.1\|WP_002211866.1\|2955764_2956319_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	1.71931e-94
NC_006155.1\|WP_011192633.1\|2973101_2973977_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.71177e-57
NC_006155.1\|WP_011192626.1\|2958298_2959645_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	0
NC_006155.1\|WP_011192624.1\|2956329_2957334_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NC_006155.1\|WP_011192631.1\|2970109_2971048_-\|DUF1861-family-protein	gnl\|CDD\|378102	pfam08950, DUF1861, Protein of unknown function (DUF1861). This hypothetical protein, found in bacteria and in the eukaryote Leishmania, has no known function.	4.28073e-173
NC_006155.1\|WP_011192622.1\|2954153_2954657_+\|formaldehyde-activating-enzyme	gnl\|CDD\|224708	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy production and conversion].	3.6884e-91

>NC_006155.1|WP_012413791.1|2963087_2964068_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLAATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAALCSQVPR
>NC_006155.1|WP_011192627.1|2959800_2963091_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCHKRALDETRRILDQFAERKGDRTWQTAITQEGLNTLRKLLRRTARRNSAVACHWIKSNNQSELLWIVGNLRRFNAEGTVPTNTTQRDILRSQDENNWHSVETIALLAGIAGLFHDFGKANVLFQQGLQGQGKTYQPYRHEWVSLRLFQAFVEQKNDIQWLTALSQINPADETALMSNLVKDGLDDYTNPLVALPPLAKTIAWLILSHHRLPVYPSKDYHRPPKVEEIDDWLHQQLMPVWNSTNMDSGDWREKDKLDVWRFPHGTPLQSAEWCKKAQKFAKRALRQPSLVNDGHLNQRFTSHMARLALMLADHHYSSLPATPGWQDKNYQVFANTHNKMRDVNAHSKTIEMKQRLDEHNIGVGQNALLLGRSLPHIRKTLPAITRHKGFKQRSVQEKYRWQDKAFDLAVTLRERSLQQGFFGVNMASIGCGKTFANARIMYGLSDEKQGCRFSVALGLRTLTLQTGTALQQKLTLQKDDLAVLIGSQSVLQLYQLNNDKLEPRGTGSQSADKFFSEHQYVSYDGSLDDGRLSTWLSNNDRLKRLLCAPVLVCTIDHLIPATESLRGGKQIAPMLRLLTSDLVLDEPDDFDRNDLPALCRLVNWAGMLGSRVLLSSATLPPALVQALFNAYRAGRADYQQASGQPDTPVNICCAWFDEHGVAQQDIQQSKDFIQHHGDFITRRVGKLSTAEVLRRAELIPVSSASVKNGSVLDAMAAVMRDSMLRLHQAHHQTHPSEKTVSVGVVRMANIDPLVAIAQRLYAMAAPENYRIHYCVYHSQHPLAVRSAIERRLDVTLTRYQPNALWQVAEIEHALQHHPEQHHLFVVLATSVVEVGRDHDYDWALAEPSSMRSFIQLAGRVQRHRQVAPQMANMHILQKNFKALTQKDPAIPVYCKPGFETTRCRLNTHDLDKLLLPSQYKVINAISRIQERTKLEPRDNFVDLEHLSLRLILQGSAEPLKYYAALWWRKQATWSGEQQRCTPFRQSSPDEQHNLWIDDEADKPVFKRLDSDQIEWKVSDGFQDVELTLAAGNSAWIDTDCLRIYQWLAESLNKELNEVSRQFGEVRLLSKKDGERWHYHPLLGVFGALD
>NC_006155.1|WP_011192626.1|2958298_2959645_-|type-I-F-CRISPR-associated-protein-Csy1
MEEKGLTAFIVSYIKSREQPKLEAFDKEAEKRLAGLTQAEDIALAQQEIAQQRRELIARYEVRNWLTDAANRAGQISLVTHALKFTHSDAKGSSVFNLPAAENDAIYLSSATLGQPAVDAVGNAAALDVAKLLQTEHNGDSLLACLNRADNSPLAALAENPQQLALWVEGFKQALVDKQLTSHKLAKQFYFPVGLDQYHLLSPLFSSSLAQAMHQRIAEARFSDQSKEAKVAHKAGKWHSEARVIYLKTAVQNIGGTKPQNISYLNSVRGGKVWLLPCGAPPWKNIQKPPIKYRSIFHDRSEFTVLARNNLWQMQQYLLGVKPLSNTMDIRAVRLACSDEIIDILFNYVAEIQNLDGTNGWSDAEDCKLKRSEQLWLDPNRAMDDPVFKLEREKEDWKQEVSQDFGYWLNRWLQHDELVFGYVEQREWSSLFKQRLREFEQGSLETWS
>NC_006155.1|WP_011192625.1|2957351_2958302_-|type-I-F-CRISPR-associated-protein-Csy2
MSSLIVLHQVRVENANAIAGLTYGFPAITHFLGYSHALSRKLQSSHGLTLRGCAVICHHQQVHAYSSGRDYVFSLTRNPLTKEAKTAAFNEEGRMHMTVSLVIECDGTIANGDDGANALEKHLASLCLTQRLAGGTITNIRRVKVINYPETEVATRRLLCHLLPGFALLDRSELLAEHLNQLRQTNPQTEMLDAWLDFSALKIQAIPPQSDTPVESGAPAPWGYVGKPAAGYLVPIVTGYRAISPLYAPGEVDKTRDPHTPFRFVESLYGIGEWRGLHRITDLRQLLWGYHQEGDNYLCRCALPASVDTYLLNDEE
>NC_006155.1|WP_011192624.1|2956329_2957334_-|type-I-F-CRISPR-associated-protein-Csy3
MAKATIKTASVLAFERKLSNSDAMMYAGNWGQTDNWQPIIIKEKAVRGTISNRLKNALASDPVKLDAEIQKANLQRVDVAALPFDTDTLKMSFTLRVLGNLATPSVCNDQEYQAELASVINGYISEQSFSVLAARYAENLANGRFLWRNRVGAEDIKVCITSQTKSYQFDSNEFSLRQFSQPSKELTALAQEIEQGLAGNGFAFFTVDAFVRLGNGQEVFPSQELVLDSNSKKSKVLYQIDGIAALHSQKVGNALRTIDDWYPDATELALGPIAVEPYGSVTSRGKAYRQPKQKMDFYTLLDNWVTKGTVPAVEQQHYVMATLIRGGVFGEKGE
>NC_006155.1|WP_002211866.1|2955764_2956319_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MDHYLDIRVLPDPEFSAQTLLEALFAKLHRALVATIPGRVGVSFPTAGKTLGSQLRLHGSRGDLLELQSAGWLKGLQDYCECSEILPVPADVKHRTIRRVQVKSSAQRLRRRSVSKGWLTEEQARLRIPDSHDKRCDLPFLRLKSRSSEQYFLLFIEQGTLQASATTGEFSAYGLSVNATIPWF
>NC_006155.1|WP_011192623.1|2954667_2955687_+|aldo/keto-reductase
MDYIKLGHCGLQVSRLCLGTMNMGSKQWKPWVFDKAESTPLIKHALDCGINFIDLADFYSAGVGEEVVGRIVKNLMSRDELVLTTKVGYPIGHGPNNQGHSRKHIMASIDASLKRLGTDYIDIYMLHYFDINTPVEETWSAMNDIIHSGKARYTGVSTMFTWQLSKILWCCERNGFAKPINMQLQLNCAYREEEREMIPQCRDQGLGISAFSPLARGLLSCDFSSVRNKTDFFTQEMYADVTSLNIAQSVERVAKNRGITPAQVAQAWVLNHPGIDCMLVGADTIEQINSAVTALRISLNAEENFELERNYTPCDVINDYTAGQRIAREARPPSGIFAP
>NC_006155.1|WP_011192622.1|2954153_2954657_+|formaldehyde-activating-enzyme
MQMYIGEGFAGNGVNAAHINIMIGPRDGVVGQAFAASLASPSQGHCPFIVVIKPNVAAKPMTLYVNKAEIRSELHGRATWGASQAAVAKAVAEALLANLFPPEAEDDWCIITANWVNIDCDDIDEVYRNNYRACTTALHAAMAKTPKRDQLTHALTQLSNPFFTPKA
>NC_006155.1|WP_011192621.1|2952748_2954107_+|MFS-transporter
MQTLPSEKIRMDDVPLNRFHIRIAGLTFGAHFIDGYILGLIGFALIKLKPIMALTPLWEGLLGSAALIGLFLGSLILGWISDYIGRQKIFSFSFVIITLASALQFFASTPEQLFILRVIVGIGIGGDYSVGHTLLAEFSPRKHRGVLLGAFSVIWTFGYVSASFVGHYLSMVSPEAWRWLLSSAALPALLILLVRIGTPESPRWLMGKGREDDAMAIVHKYFGPNVTLIDEEPATSTRRFLSLFGRKYWRRTAFNSLFFVCLVIPYFAIYTFLPSILNVMALSQNFATDLLLNGLLVVGALVGIVLTAFCSRRSFLISSFIFLATCLLLLSILPSNQTFWLIALFAAFTLVMSAVSNLVGVFPAESFPTEVRSMGVGFATSMSRLGSAIGTSLLPLAIVNYGMPVTTTLLAFVLIIGAIVSIAWAPETKGLTLVDASQSATTPRPPSSIIPN
>NC_006155.1|WP_002216551.1|2952415_2952625_-|hypothetical-protein
MVIGDLLTETDRLFQKRTAAMDDLFSSPGPVRLILFVMAMCQPKYKAASAFYAYPSEKKVRDPPLNSYK
>NC_006155.1|WP_011192629.1|2965755_2967000_+|mechanosensitive-ion-channel-family-protein
MQQRISQWLERLGMEFSNVMSLTMVIGLILLISVMIHLVLHRVVLAALQRRGQQSQRIWQQAITKHKLFQRVALLLQGIIINLQAVLWLQNGSQTQAVIVTAAQVWIMAFALLALFSLLDTLLALLRQSSVAHQLPLRGICQGLKLVAAIFIGIMIVSLLMGRSPLLLLSGLGAMTAVLMLVFKDPILGLVAGIQLSANDMLKIGDWLEMPKYGADGAVTDIGLTTVKVRNWDNTVTTIPTYALISDSFKNWRSMSESGGRRIKRSINIDTTSVHFLSEQEQQRLTLNPLLQHYLSEKSQELNQYNQQIALDLSSPLNGRRLTNIGTLRAYLVAYLRAHLGIHQSMTLMVRQLAPTPEGLPLEVYAFTNTTIWAEYEGIQADIFDHIFAVVSEFDLRIHQTPSGNDMRSMLAKV
>NC_006155.1|WP_011192630.1|2967558_2968833_-|hypothetical-protein
MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDTSSPVNGAFLSWQNLWHGYGNSQAYALLVAGNRLGDRDMIKAAFNELDHFHPWLISNGLLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSTTTVNKNSGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ
>NC_006155.1|WP_002230953.1|2968871_2969987_-|hypothetical-protein
MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNVNYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
>NC_006155.1|WP_011192631.1|2970109_2971048_-|DUF1861-family-protein
MMRHAPPASVAQLFADYQKRTAHNTFSTGRLEFTGVGDKDVYNITAPFTSAGQVVSAGRVEARDSEHSTIVFFREQQGRWAPVENAPTFQLQDPFFTWIEDELIFGGVEINPHPDNPGQLIWHTVFFRGRDIHSLTRFASGPPGMKDIRLCHIQQGRIGVFTRPQGKIGGRGTIGYVEINNLEALTPETITSAELFEQQFNSEEWGGVNETHLLCDGTIGLLSHIACFDQHGRRHYYPGVFIFNPDTKNYTPIKIIAARDNFLPGAAKRPDLVDVIFPGGLIVLPNNGWRLYVGASDAEAHWIDIEDPFSGF
>NC_006155.1|WP_011192632.1|2971074_2972130_-|glycosidase
MIRYSGNPLITPQDITPSHPGFKVECAFNAGITKLGDETIMLIRIAESVIPESEGITVVPLLMEISGHWQVTTRVFKHDDPAYDFSDPRLISDIADPSTVYLTSLSHLRVARSHDGVTFVVDDQPFIFPANGDEAFGCEDARITQIDGAYYINYSAVSAKGICTALAVTQDFTDVKRLGLIFCPDNRDACLFPEKINGKYMTLHRPAPKHFGKPEIWLASSLDLLHWGDHRHLLGTSQDPWDALKLGGGAQMLKTEKGWLQIYHGVDATQRYSLGALLLDLEQPTKILAKSPVPLLQPQAPYELHGFFGNVVFTCGALIENDSLRVYYGAADECMCLAEMPLAQLWQHLSV
>NC_006155.1|WP_002210197.1|2972276_2973101_-|carbohydrate-ABC-transporter-permease
MKKNINSLIIHLVMFSLALSWLYPYIWMVLSSFKQSADIYTTGLFGSAYSLDNYRFLFENSGRVEKPFLKTLFNSLFISTVVTVAVTLSSMFIGFALAKMQFKGQSLFRNLLFLQMVFPASMFIIPQFVLVRELGLLNTYSAMIVPFLMSSWGIFMISQSFQGTPNDYIHAAKIDNASLWQIMIYLMMPLNKAIIAIVALFTFVGTWDNFLWPLIVIQDESKMPLSVLLATFSKSYGVYVGPVIAGAVIQTIPIVVLFILFRKYFMQGMSLSLK
>NC_006155.1|WP_011192633.1|2973101_2973977_-|sugar-ABC-transporter-permease
MTFLKLKDKQVGSVLAASYLGYTSIFWFYPFIWLAVLSLTEWRFVGIPTFNGLNNFILVMQDPLFWKSMLNVMRFLMYYLPIVFTSSFLFAFGLQKLKYGRTFVALSFLLANVSSGVAYSIVFSKIFSQNGPLNTFLYDWFGFTLPWLTSPDFAMLSIALVVTWKFVGYYGLILFSGLNSIPKEIYSAAELDNTRTIKRLFHITLPMINPQLIMVLVLAITVSFAIFTEPYLITGGGPLNSTTTPMIVMYETAFMKMQPSWAATMSIFIALISFGIILGVRKLLERKVEIV
>NC_006155.1|WP_011192634.1|2974085_2975372_-|carbohydrate-ABC-transporter-substrate-binding-protein
MLEKMKNTLISLAIASSCVVFTGCDNDTASAKNEKQDITLWIAPNNVQEAFWSEVVGEWNKQPDKKKVVFSTIPAAGSSEEAIMNAIASDRAPDISENIFTGFGSQLADLGQVVDLSTLDGYENLISTRQMTDIMDNWRYNGKNYILPIYMNPVLFWWRGDLLKEQGFSEVPKTYDEVYALSEKYTIPDKRYAIQATSGRNWWDRWFDFIALYYAQSDGKPYIANQQASYDNQAGRDVLDFMHTLFSKKWTLYDFGQDDPLVTGKVLGAVRGPWDISRYQQQYPEILKHIKMGPMLVKEQQDKPHTFADGKGLVLFSHSKVKPEAWEFIQWVFSQPKFDKRWMELTGMPPARADLLTNPFFAEYYQEHPYAAAYAEYVNVAIPPVSSGETVEIQRSMTQMIEKTAFNTSTPDEALQQSIKEVNAILKP
>NC_006155.1|WP_002210200.1|2975643_2976684_+|LacI-family-DNA-binding-transcriptional-regulator
MTTGKKRETLKTIAETLNVTHTTVSNVFNRPEKVSPELREKILAYAESINYHGPAGAGRFLRTGKCGTLGVIFNDNLSYVFSDRHDIALMRGIAEECEKNGINIALMPLKTNNALKKRMMGALVDGYILNATYNNDEVVQAALTSGLPVITTDIKLQNFTCVSIDDGAAMQAICHHLLAAGHKKFGIVSFPVKRLPGELTSLAEFSTDYDNGVAFGRISACITALSDAGIDLHTSYVAEQPHSETGGEKAAKALLAKEPGISAIICLSDRFAFGVYQFCQDHNIPVPGQIAITGFDDIDIQDPPVGLTTIRQPTVLKGREAARALISGQLDNDISLDFELVVRDSA
>NC_006155.1|WP_002210201.1|2976700_2978089_+|phosphomannomutase/phosphoglucomutase
MEKLTCFKAYDIRGKLGSELNEEIAYRIGRAYCQWLKPAKVVVGGDARATSVELKNALAKGLMDGGADVIDIGMVGTEEVYFATRFYGVDGGIQVTASHNPIDYNGMKLVKKDAQPISGDNGLYEIQRLAQDNHFAPPGVRGQLETQLVREHYVEHLLSYIDLNALLPMKIVVNAGNGAAGPTLDALEAALAKRKVPISFIKINHQPDSSFPNGIPNPMLPENQWSTRQAVCEHQADLGIAWDGDFDRCFFFDHLGNFIEGYYIVGLLAEKFLLTNNMGKATHNTDKIIHDPRLTWNTIDIVQTLNGTAIESKTGHAFIKDAMRHHDAVYGGEMSAHHYFREFGYCDSGMIPWLLVIELLSKKTTSLFSLIESRKAKFPVSGELNFTVSDPKTKIQQIKQFYADSAIHVTGIDGLSMEFEHWRFNLRSSNTEPLVRLNIETRGDVTLLEQKTAQLTQLLYPK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_7

3157266-3157377

Orphan

Consensus_repeat	Method
ATTAATTAACCGTTAGGAATTTTCTTCAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_7

>merge|NC_006155|7|3157266-3157377|CRISPRCasFinder
ATTAATTAACCGTTAGGAATTTTCTTCAAATCATCTTCTCGCATTCCTAAATAATAGGTGTTTTTTTGAATTAATACCCGTCATTAATTAACCATTAGGAATTTTCTTCAAA

>NC_006155|7|7|3157266-3157377|CRISPRCasFinder
ATTAATTAACCGTTAGGAATTTTCTTCAAA	TCATCTTCTCGCATTCCTAAATAATAGGTGTTTTTTTGAATTAATACCCGTC
ATTAATTAACCATTAGGAATTTTCTTCAAA

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_011192708.1\|3149363_3149972_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NC_006155.1\|WP_011192711.1\|3154430_3157088_-\|type-VI-secretion-system-ATPase-TssH	unknown	unknown	gnl\|CDD\|274528
NC_006155.1\|WP_002211582.1\|3157871_3159752_+\|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl\|CDD\|226050
NC_006155.1\|WP_002215321.1\|3166861_3167344_+\|DcrB-related-protein	unknown	unknown	gnl\|CDD\|227722
NC_006155.1\|WP_002211573.1\|3146389_3146875_-\|type-VI-secretion-system-tube-protein-Hcp	unknown	unknown	gnl\|CDD\|225699
NC_006155.1\|WP_011192714.1\|3162075_3163107_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|366088
NC_006155.1\|WP_011192712.1\|3159751_3160777_+\|type-VI-secretion-system-baseplate-subunit-TssG	unknown	unknown	gnl\|CDD\|226051
NC_006155.1\|WP_002211574.1\|3147207_3148710_-\|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	gnl\|CDD\|226048
NC_006155.1\|WP_011192719.1\|3169587_3170682_-\|lytic-murein-transglycosylase-B	unknown	unknown	gnl\|CDD\|236754
NC_006155.1\|WP_011192717.1\|3165182_3166865_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NC_006155.1\|WP_002211571.1\|3144223_3145573_-\|type-VI-secretion-system-baseplate-subunit-TssK	unknown	unknown	gnl\|CDD\|226053
NC_006155.1\|WP_002211579.1\|3152756_3153518_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NC_006155.1\|WP_002211572.1\|3145576_3146116_-\|type-VI-secretion-system-lipoprotein-TssJ	unknown	unknown	gnl\|CDD\|226052
NC_006155.1\|WP_011192715.1\|3163146_3164484_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|371506
NC_006155.1\|WP_002211575.1\|3148733_3149258_-\|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl\|CDD\|226047
NC_006155.1\|WP_011192710.1\|3153674_3154220_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NC_006155.1\|WP_011192713.1\|3160875_3162069_+\|ImpA-family-type-VI-secretion-system-protein	unknown	unknown	gnl\|CDD\|226046
NC_006155.1\|WP_011192716.1\|3164480_3165182_+\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_012413818.1\|3149956_3152629_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NC_006155.1\|WP_011192718.1\|3167716_3168319_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_011192708.1\|3149363_3149972_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	9.32653e-21
NC_006155.1\|WP_011192711.1\|3154430_3157088_-\|type-VI-secretion-system-ATPase-TssH	gnl\|CDD\|274528	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NC_006155.1\|WP_002211582.1\|3157871_3159752_+\|type-VI-secretion-system-baseplate-subunit-TssF	gnl\|CDD\|226050	COG3519, COG3519, Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and vesicular transport].	0
NC_006155.1\|WP_002215321.1\|3166861_3167344_+\|DcrB-related-protein	gnl\|CDD\|227722	COG5435, COG5435, Uncharacterized conserved protein [Function unknown].	1.8658e-59
NC_006155.1\|WP_002211573.1\|3146389_3146875_-\|type-VI-secretion-system-tube-protein-Hcp	gnl\|CDD\|225699	COG3157, Hcp, Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion, and vesicular transport].	1.41624e-58
NC_006155.1\|WP_011192714.1\|3162075_3163107_+\|fimbrial-protein	gnl\|CDD\|366088	pfam00419, Fimbrial, Fimbrial protein.	6.3376e-12
NC_006155.1\|WP_011192712.1\|3159751_3160777_+\|type-VI-secretion-system-baseplate-subunit-TssG	gnl\|CDD\|226051	COG3520, COG3520, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	2.16581e-133
NC_006155.1\|WP_002211574.1\|3147207_3148710_-\|type-VI-secretion-system-contractile-sheath-large-subunit	gnl\|CDD\|226048	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	0
NC_006155.1\|WP_011192719.1\|3169587_3170682_-\|lytic-murein-transglycosylase-B	gnl\|CDD\|236754	PRK10760, PRK10760, murein hydrolase B; Provisional.	0
NC_006155.1\|WP_011192717.1\|3165182_3166865_+\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	2.77533e-34
NC_006155.1\|WP_002211571.1\|3144223_3145573_-\|type-VI-secretion-system-baseplate-subunit-TssK	gnl\|CDD\|226053	COG3522, COG3522, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	0
NC_006155.1\|WP_002211579.1\|3152756_3153518_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	2.81932e-83
NC_006155.1\|WP_002211572.1\|3145576_3146116_-\|type-VI-secretion-system-lipoprotein-TssJ	gnl\|CDD\|226052	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	1.44402e-54
NC_006155.1\|WP_011192715.1\|3163146_3164484_+\|glycosyl-transferase	gnl\|CDD\|371506	pfam11397, GlcNAc, Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.	1.44816e-71
NC_006155.1\|WP_002211575.1\|3148733_3149258_-\|type-VI-secretion-system-contractile-sheath-small-subunit	gnl\|CDD\|226047	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	5.26642e-84
NC_006155.1\|WP_011192710.1\|3153674_3154220_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.76157e-21
NC_006155.1\|WP_011192713.1\|3160875_3162069_+\|ImpA-family-type-VI-secretion-system-protein	gnl\|CDD\|226046	COG3515, COG3515, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	7.7898e-68
NC_006155.1\|WP_012413818.1\|3149956_3152629_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NC_006155.1\|WP_011192718.1\|3167716_3168319_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.11998e-11

>NC_006155.1|WP_011192711.1|3154430_3157088_-|type-VI-secretion-system-ATPase-TssH
MAITRKYLFGKLDATLFKGIESATTICKLRGNPYVELVHWLNQLWHQEDNDLKQIIRYFAVDVDAFERELAQALAKLPVGATSISDFSYHIELATERAWIYASLECLDTRIRSGHLLLALLTTMELRRAFFAIAPSMEKIPLEHLSKDLNFITQASPEANEAASDGSPLYDGALPGEASNAIGAAKSGGTLAQYTTDLTALAREGKIDPVLGRNHEINTMVDILLRRRQNNPLLTGDAGVGKTAIVEGLALAIAAGSMPPALSQVSLLSLDIVALSAGASMKGEFETRLKSVLDEAIAAEKPVILFIDEVHTLIGAGGNAGTGDAANLLKPALARGQLRTIGATTWSEFKRHIEKDPALTRRFQVLQVDEPDENTAISMLRGLIPALEKHHGVWIMDEALQAAVRLSHRYIPARQLPDKAISLLDTACARIAVAQHSQPIELQHLTFQSETAQTELVSLEKARHFGKAQDARTEQLKTSIAEHGEAADKLDQRWQAERELVSAITTIRTALYDLVSQPEPDEEKRRAYQAQLVQLEAQLSQVRTSLPLVQTEVNAEVIASIVADWTGIPVGQMLKDDIRAVMELPQRLEARVIGQPHALMQLGENIMTARAGLSDPRKPLGVFMLVGPSGVGKTETALAIAESMYGGEQNMITINMSEYQESHTVSSLKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEIEKAHSDVHELFFQVFDKGQMEDGEGRFIDFKNTILLLTSNVGSELLSNLLADPDTAPDQDGILTALQPELLKVFPAAFLGRVTVIPYLPLQQDALQHIVRLHLDRIGARLYSQHQLTLKYSDEVVDDVVSRCAVSETGARMLIRYIEQNITPKIGKYILGDSDVKPEQIIFVHKNENGFVIALQ
>NC_006155.1|WP_011192710.1|3153674_3154220_-|type-1-fimbrial-protein
MRKLNLAVCAVALSVISATSYAAAGGTVTFNGKLIADTCQVDTASENITVTLPTLSIQSLAVAEAQDGSKDFEIKVLDCPATLTQVGAHFNAIDSSGVNPATGNLVNKAPTDAAGNVEVRLYNVDDSSQIRVGSTGNMVNIVYVGATPGTANLTYAGGYYATDATTPGEVNAKVEYVLAYN
>NC_006155.1|WP_002211579.1|3152756_3153518_-|fimbria/pilus-periplasmic-chaperone
MFSKIIILVLSLTISSIPAFAAMTISGTRVIFPAAEKEVSIRTNNKGVQPALVQVWVDDGKTNANINSMKLPFMVTPPVFRVEPGKGQTVRMIYNGMALPQNKESVFWFNMLEIPAVKKEGNTQNKLELAFRTRIKVFYRPTSLESNSAAQSAQLKWTLVDDNQKGRGVKVVNPTPYYISFDSGSITVGAKSVEIITDMVPPFSEKMFFPKLKLLGSTSISKMNYKILNDYGAAIDEELSFSQGQGVLVSKKK
>NC_006155.1|WP_012413818.1|3149956_3152629_-|fimbrial-biogenesis-outer-membrane-usher-protein
MNRTDIACYIENNIGKLNYLPYKASLSVAVIFIGSVLLVTKSISAVPMSQDTNESAAVIPVEFNADFIHGGGVDVMRFMHENPVAPGVYDVTVIINGKNRGKHRIRFELSEGESTAEPCFTLEQLDSIGLKIETSDTDLLVNGKAAPKDQCYNLRALIKDSHVNYNSGDLELSLTVPQFNLVHHPRGYIDSSLWDAGGTVGFLDYNSNVYSIFNGRSSSDVGSDNSNSYNSNIGLSAGINLGEWRFRKRLNTTWSNSSGMHTQNLYGYAATDITALKSQLTIGDTNTQGSLFDSYALRGVLLASDTRMLPEGIRNYSPIVRGIAETNARVTVTQRGQIIYETVVTPGAFELTDIGTMSYGGDLQMTITESDGRTRIQRIPFSAPPMLLYQGVSRFDFSAGQLNDSSINHNPAIVQGAYHYGLGNTYTLYGGAQVAENYRSVAIGNAFNTPLGGVSMDITHAKSELAGDRRSSGNSYKIDYSKYVGETDTNLTLAAYRYSSGGYYSFREASLDRYGNSNGIDEIDFRTRNRLSLSVSQRVADNMSVNLNSSLYSYWGNQDASQQYSVGFNHSLRFFSYTVSAIRTSNSSNSSNGDNDREYENSYMLAVSIPIGGSGKNKPLFSSLSTMVSHSEAGDTQLQLTTSGSRGDQNELTYGIGTSYGNRNDASSEQSVIGNMGYQSSVGQLGMTASANNNASRQLSVSASGSLVAHQGGVIAGPRLGDAPFAIINAQGAGGAKVFNGRGAKIDSNGYALVPSLTPYRENTIAIDYKDLPETVDILENHKVVVPRMGAMIPVKMKTMTGNPMMLIVRDENKEFLPIGTDLLDADGVSQSIVGQGGMAFIRGWDPVSQPITATLNGGIDKCVIKPDAKIDTATKTVQIIQLEVICLRR
>NC_006155.1|WP_011192708.1|3149363_3149972_-|type-1-fimbrial-protein
MSSSLKNKVAQKPIALLLLLTAVFIAQSQPAQAASSCAGTADCHIQVSFGGEYVEDTCEVSINGASSAESVSLPTLSTSKLNIDGAEAGNQAFQIALKLCPANRSVDLRFTAADSSRNPDVVTGNLQNELGDDYSLSVQVRLSKATGQQMFVGREDSVQEYIIPATGEDITHYFLAGYYAKGTNAVTPGQVKATAGIELVYK
>NC_006155.1|WP_002211575.1|3148733_3149258_-|type-VI-secretion-system-contractile-sheath-small-subunit
MVSKSNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPSVADRKLLDIDIDNFDERMKAMKPRVAFAVLNTLTGEGQLMVDITFESMDDFSPDAIAKKVDSLSQLLDARTQLANLQTYMDGKAGAEELVMKLLKDKSLLTTLASAPKAKQSAVDTPQ
>NC_006155.1|WP_002211574.1|3147207_3148710_-|type-VI-secretion-system-contractile-sheath-large-subunit
MSTQDAKTKQATVASATEYSDFNTLLTKEFKAKSEQTIAAVEGAVKTLAEQALANSVTVSDDAYKSIASIIAEIDRKLSDQINLILHHQEFQSLESAWRGLHYLVNNTETDEKLRLRFLDISKDELRRNMKRYKGVAWDQSPLFKKIYEEEYGQLGGEPYGCLVADYYFDHTAPDVDLLASIGKVAASAHVPFITGAAPSVLQMESWQELSNPRDLTKIFTQNLEYAAWNSLRQSEDSRYIGLAMPRFLSRLPYGINTNPVDAFHFEETTDGADHSKYVWSNAAYAMAVNINRSFKEYGWCTLIRGVESGGVVEGLPCHTFPTDDGGIDMKCPTEIAISDRREAELAKNGFIPLVHRKNTDYAAFIGAQSLQKPAEYYDSDATANANLSARLPYLFACSRFAHYLKCIVRDKIGSFKERDEMQRWLNDWVMNYVDGDPANSSLETKARRPLAAAEVIVEEVEGNPGYYQAKFFLRPHFQLEGLTVSLRMVAKLPSLKDVA
>NC_006155.1|WP_002211573.1|3146389_3146875_-|type-VI-secretion-system-tube-protein-Hcp
MAQDMFIKIDGIEGESLDANHKNEIQVLAWNWDVAQHSNMHSGSGGGSGKASVSDFCFAHYIDKASPNLLSYCLLGKHIKNVQFVLRKAGGDPLEYLTIKFTDVIITRVDMAGSLEDETRPREEIRFSFTKMTQDYVMQNAEGHKSGVISANYDVKANMHS
>NC_006155.1|WP_002211572.1|3145576_3146116_-|type-VI-secretion-system-lipoprotein-TssJ
MNKSIRGVYRATQYLFLVLVTLLTIACSSKVQPEKAEKLTVEIATAADINPNDKGVANPLRIALYTLKSTDEFQSSDFFTITEENTPSLKEQMDNVFDRIMLPSETKKIELTLDAGVTAIGIVAAYREIEQAEWKAVIYPLPKKRVDPWYKKMWPGQDQQDPIMKVRVERLSISIKEMD
>NC_006155.1|WP_002211571.1|3144223_3145573_-|type-VI-secretion-system-baseplate-subunit-TssK
MRTNKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGFAQYEIDREALSYGKLVLRSGKGVLPDGTPFDIPGHAELPEPLTITPEHLGKLIYLAVPLRLDNSDETIFDEHDMSSLARFYAYEAALNDTNAIRQGPKPVQLSRLRLRLVSEGEMTESWIGLPLTKVRAIQPDGSVLLHTEDYIPPVTGYAASSLLSEWLTHLNGLVKMRAEMLANRLSNSDGKASASAEIVDYLLLQIFNKYEPILDHLRHIPELPPITLYQELAKFSGELSTFIRTKTRRPRPAPGYDHAKLYASIRPLVDEVHELLNQILVRAGQMIPLETKGNGVWSASVLPNELRSFSNLVLAVHAQLPMDVLQHQFSVQTKISAPQQLHELVRSHLPGLELQRLPVPPRQIPYSAGYVYFELIKNGPFWDKVSNAGAIALHVAGDFPALKMELWGIRDS
>NC_006155.1|WP_002211582.1|3157871_3159752_+|type-VI-secretion-system-baseplate-subunit-TssF
MDHKFLDYYNKELTFMREMAQEFAEKHPKIAGRLGMHGIEVADPYVERLIESFCFLSARTQIKLDAEFPKFTQRLLDIVYPNYNSPTPSMGVIQLKPNLKEGDLTQGYCVPRGSSFFTHIAPGETTRCEFRSGQDVELWPLEIAEARLSSVPPDMPNLEKHRIAYHRLKGALRIKLKLVGDLTFSQLEGLDRLPIYIDGDERIVSHIFELLHASHVATIIRAGHGETAKDTVISDQPLSFEGLSPDQSLLPLSWNIFHGHNLVQEYFTCRQRFYFFTLTQLSQSLRDNHTGEAEIIILLDRLPQDLVSHVAPSRFLLACTPVINLFPKRMDKIEINRALNDFHVVPDRSRPLDYEVFAINKVFGQQAETSNEVVFNPLYQTRHCDNGNFGRYFSITRKARTGDSNKRKYDTRTPYASTEVFVSLVDQQEAPYGDSLRYLSIEAQVTNRDLPRLISASGNFELTMSDSAPVHGARFVFQPSAPRAPFAMDESAWRLIRQLSFNYLPLSDMSHSNGGESLRNMLRLFVNASDHESNTQIDALVGCKSEPVIRRLPGNGLLVYGRGICCTLTVDEEGFSGISPYLFGMIMENYVARHAAINVFTETELNSMQRGRVGHWKARPGRRGVL
>NC_006155.1|WP_011192712.1|3159751_3160777_+|type-VI-secretion-system-baseplate-subunit-TssG
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARNPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMKDGKMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSLAGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGAILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWLARSDTTLDVGGMSFEPEMHHD
>NC_006155.1|WP_011192713.1|3160875_3162069_+|ImpA-family-type-VI-secretion-system-protein
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDIRLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQLSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDAAITPIAPIVVPEPIETPDVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPPLQPLQLQSAQLQPVPIQSPPVPVQQQGIQNRADALARLIEVREWFTAMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
>NC_006155.1|WP_011192714.1|3162075_3163107_+|fimbrial-protein
MTRKLFILVFGAAISGQVNANCTLHLVSNSESVAGVMPLTFPISSFTFTIDADAPNDSTVPILEKVAQPQGLAVIYHCTSVDRYGKNVGPILGQDLGNGLFATNIDGIAIKPAWNNGAAYGYFNSSGIMPAFEREGVPTEEGFWTYPGTSHFRFELYKIKDTLNLTDTNGERVLPGGTIAYTWATNNSLANYAQRLEIGEIKVISTPSCTFDGPQKVNFGLVTSSNLNNGGIERDLDFNITCKTDYGHYSATAAISTQTPSDDNNYIKVKDNQNQEDRLLIKISDTNGQQMKVNGSTTEQQVNIASGVPAGFRWKAKLEAAPAANKPAIGDFSAMAEIILQIK
>NC_006155.1|WP_011192715.1|3163146_3164484_+|glycosyl-transferase
MQSVPSIFVSIASYRDPELIPTLHDMINTAERPENLNIAIFWQNDNDINTFLNQGMQLIERKTHQGYPLYQLEYNRARVSVLSVHYYESRGACWARHMAETLFQDEAFFLQIDSHCRFIPHWDHEMIAMLDSLRAESPKPILSSYPPAYEPGENEIRKDYVSRMIFNLFTQEGIVQMLSTTITETAPVRCGYLAGGFIFSDGSFAREVPNDPNIFFIGEEIAMAARAFTHGYDIYAPHKILLWHFYTRAEHSKVWSDHNNEAKETGAVDMAWWERDKIAKDRVCTLLDGDKDHRVLAPYTLGTQRSLSEFEYRLGINIKNRAVHPDAAGEKKVSFFTDLPTSHEDWLSSLISVNKKTLKVEKKEVDFTREDVEWWHIGVYNPQNVAVMVEKVDPQNLSKTVTPVDETTFELKLAFNTQTHPNAQTIRICPYMRTQGWGDVVEKPW
>NC_006155.1|WP_011192716.1|3164480_3165182_+|hypothetical-protein
MSSADIFKKILSIDTLLSFDGVIPSLSEFQLKLVTLIEQFGHALQSEGHNETEVDRLCHQICHSLDKRAGSAIKENGLSWEGYSLVHYFYGYIAPVPSESESLEALLNSDDATVSQFALKILALSQNLPIHDEKSLQLLARYSHRSLRQNVIATDDDIDPEEWLGSALKREETIEAEQVPEANIVSEANIALEANIVSEQRRSSRPFYLQLITLTLLLSTLWFWCSRYLGDLS
>NC_006155.1|WP_011192717.1|3165182_3166865_+|OmpA-family-protein
MFKVKLNKTLSLLWLAAVGTLLVSVNFKGNALWNNVIFITFLALMVLAIWKHYALKPKPPQVPIPVPQETAEPVEQESTVILILGPYAEKWFSNPESPDSTRFSSHAVWILITNPAALQKRLTYIAEHHPSAQVLTFFPFLPDVYENAAVMMSKLTVWQNTFSTLSLRSPLPCVFAIYAQLSNERLSHNSDNAYWTGNINLANQQPIEITQALQSLSQRLELQDINHSGFATQRNVMAHNLFTWLNESGVTNLLQSIFSRTPLRLTDVILSDNGKGFIRHGAWSAWLEKKFGIIPSLASTLSLPPFPAVINDQKPAIKPRVKTPVIKPIPASRGWLWSVCFAAVLLASHMLNTLWQEKNRHAQFNQQMVPLDNINDFSAQYLARSITQLTDEGKTLTTCVNTFDVTRWGLSQCQTLLSQINRRIESYENIPVFSFAQKLPLFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALALRDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRTRMTEPKPL
>NC_006155.1|WP_002215321.1|3166861_3167344_+|DcrB-related-protein
MNAIPSTYSIFEGTFLTPAPVLDRSVNILMFRDPDNHEYNIIINRTLLEEEDTSETFCEKEMDALRNKLPGFQVEGKLLKHEIGPAKLPVVQVANHYLQDGKKFRQVQSIMQLPYHSLTNTDGRSVLIFTLNTDGEFTEYQRKHYVQIINSFNPHVAVAN
>NC_006155.1|WP_011192718.1|3167716_3168319_-|LuxR-family-transcriptional-regulator
MFSVAIKTRNAFYEFGLLSLLKKVLIKEDDMDYSIVPSHEKRASNNANVIFKDLMVIVNIYQENSFIQKNDSNNNKPMMTVNIPFNSSQLGLYDVISKIKKILNIARLNYNMMMKSDLQRRIGLKNYIQLSMTESKVVQLTGKGHSTTDISKILDRSEKTILTHRRNAIRKLGMFNRLEFYKYASLMRNYSNKDAVFICL
>NC_006155.1|WP_011192719.1|3169587_3170682_-|lytic-murein-transglycosylase-B
MRYLAVILPLFTLLSACSSQPTPPVAATPSDSPVQGGFLLEPEHAGQLQNGDFAFNPDTTRFVDKMVREHGFDRQQLHDVLAQTQRLDWVIRLMDKQAPTSRPPSGPNGAWNRYRNKFITPDNVQNGVVFWNQYEGALQRAWEVYGVPPEIIVGIIGVETRWGRVMGKTRIIDALATLSFAYPRRATFFTGELETFLLMARAEGKDPLSLRGSYAGAMGYGQFMPSSFKRYAVDFDGNGHINLWDPVDAIGSVANYFKSHGWTKGAPVAVPANGQAPNLENGFKTRYPISTLAAAGLSPKGPLGDYQETSLLRFDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGEAVGRVRKGESMITQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_8

3240031-3240127

Orphan

Consensus_repeat	Method
ACTAATATCTCCGGCCATTTTCCACTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_8

>merge|NC_006155|8|3240031-3240127|CRISPRCasFinder
ACTAATATCTCCGGCCATTTTCCACTGCCCGATAATTTGACACACCTCAATTTAGCCAATAATCAATTAACTAATATCTCCAGCCATTTTCCACTGC

>NC_006155|8|8|3240031-3240127|CRISPRCasFinder
ACTAATATCTCCGGCCATTTTCCACTGC	CCGATAATTTGACACACCTCAATTTAGCCAATAATCAATTA
ACTAATATCTCCAGCCATTTTCCACTGC

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002208521.1\|3243921_3244533_-\|RpoE-regulated-lipoprotein	unknown	unknown	gnl\|CDD\|236742
NC_006155.1\|WP_071819112.1\|3241044_3241791_+\|N-acetylmannosamine-6-phosphate-2-epimerase	unknown	unknown	gnl\|CDD\|225555
NC_006155.1\|WP_002208511.1\|3232581_3233415_-\|sulfate/thiosulfate-ABC-transporter-permease-CysT	unknown	unknown	gnl\|CDD\|182873
NC_006155.1\|WP_011192744.1\|3229561_3230455_-\|cysteine-synthase-CysM	unknown	unknown	gnl\|CDD\|236972
NC_006155.1\|WP_011192753.1\|3248179_3248596_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002208516.1\|3238541_3239414_-\|N-acetylmannosamine-kinase	unknown	unknown	gnl\|CDD\|235338
NC_006155.1\|WP_011192748.1\|3237989_3238460_-\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
NC_006155.1\|WP_002224818.1\|3227009_3227717_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_006155.1\|WP_002208522.1\|3244895_3245309_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|225653
NC_006155.1\|WP_011192746.1\|3231706_3232582_-\|sulfate/thiosulfate-ABC-transporter-permease-CysW	unknown	unknown	gnl\|CDD\|183225
NC_006155.1\|WP_002208512.1\|3233414_3234452_-\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236775
NC_006155.1\|WP_012303880.1\|3245808_3248088_+\|autotransporter-YapL	unknown	unknown	gnl\|CDD\|273608
NC_006155.1\|WP_011192756.1\|3250825_3251497_-\|MarR-family-transcriptional-regulator	unknown	unknown	unknown
NC_006155.1\|WP_011192751.1\|3242844_3243744_-\|Dyp-type-peroxidase	unknown	unknown	gnl\|CDD\|225393
NC_006155.1\|WP_011192755.1\|3250121_3250829_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227186
NC_006155.1\|WP_011192745.1\|3230625_3231717_-\|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA	unknown	unknown	gnl\|CDD\|182778
NC_006155.1\|WP_011192747.1\|3236921_3237800_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NC_006155.1\|WP_002208518.1\|3241853_3242747_+\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188641
NC_006155.1\|WP_002231046.1\|3234784_3236317_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|179668
NC_006155.1\|WP_011192754.1\|3249393_3250119_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002208521.1\|3243921_3244533_-\|RpoE-regulated-lipoprotein	gnl\|CDD\|236742	PRK10718, PRK10718, RpoE-regulated lipoprotein; Provisional.	1.28362e-124
NC_006155.1\|WP_071819112.1\|3241044_3241791_+\|N-acetylmannosamine-6-phosphate-2-epimerase	gnl\|CDD\|225555	COG3010, NanE, Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism].	1.33891e-123
NC_006155.1\|WP_002208511.1\|3232581_3233415_-\|sulfate/thiosulfate-ABC-transporter-permease-CysT	gnl\|CDD\|182873	PRK10971, PRK10971, sulfate/thiosulfate ABC transporter permease CysT.	0
NC_006155.1\|WP_011192744.1\|3229561_3230455_-\|cysteine-synthase-CysM	gnl\|CDD\|236972	PRK11761, cysM, cysteine synthase CysM.	0
NC_006155.1\|WP_002208516.1\|3238541_3239414_-\|N-acetylmannosamine-kinase	gnl\|CDD\|235338	PRK05082, PRK05082, N-acetylmannosamine kinase; Provisional.	2.48646e-166
NC_006155.1\|WP_011192748.1\|3237989_3238460_-\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	1.11005e-71
NC_006155.1\|WP_002224818.1\|3227009_3227717_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.80198e-85
NC_006155.1\|WP_002208522.1\|3244895_3245309_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	1.63737e-59
NC_006155.1\|WP_011192746.1\|3231706_3232582_-\|sulfate/thiosulfate-ABC-transporter-permease-CysW	gnl\|CDD\|183225	PRK11602, cysW, sulfate/thiosulfate ABC transporter permease CysW.	0
NC_006155.1\|WP_002208512.1\|3233414_3234452_-\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236775	PRK10852, PRK10852, thiosulfate ABC transporter substrate-binding protein CysP.	0
NC_006155.1\|WP_012303880.1\|3245808_3248088_+\|autotransporter-YapL	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.52715e-75
NC_006155.1\|WP_011192751.1\|3242844_3243744_-\|Dyp-type-peroxidase	gnl\|CDD\|225393	COG2837, COG2837, Predicted iron-dependent peroxidase [Inorganic ion transport and metabolism].	3.36085e-125
NC_006155.1\|WP_011192755.1\|3250121_3250829_-\|hypothetical-protein	gnl\|CDD\|227186	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction only].	0.00622127
NC_006155.1\|WP_011192745.1\|3230625_3231717_-\|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA	gnl\|CDD\|182778	PRK10851, PRK10851, sulfate/thiosulfate ABC transporter ATP-binding protein CysA.	0
NC_006155.1\|WP_011192747.1\|3236921_3237800_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.00834e-86
NC_006155.1\|WP_002208518.1\|3241853_3242747_+\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188641	cd00954, NAL, N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL). N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.	7.97018e-118
NC_006155.1\|WP_002231046.1\|3234784_3236317_-\|MFS-transporter	gnl\|CDD\|179668	PRK03893, PRK03893, putative sialic acid transporter; Provisional.	0

>NC_006155.1|WP_002208516.1|3238541_3239414_-|N-acetylmannosamine-kinase
MGKGLALDIGGTKIAAAVVTESGMLIGRQQIATPRGGAGQLAAALETLIAPYRHQVDFIAVASTGIISGGRLTALNPANLGGLADFPLYDCIRSISDLPCVLLNDGQAAAWAEYQALGDKNDNMMFVTVSTGVGGGIILNKKLLVGQRGLAGHIGHTLSDPHGVLCGCGRRGCVESVASGTAIGAETLGWKQPVSAATVFDMAQQGDAQAGKVINRSAAAIAQMLADMKMALDLEVVILGGSVGLAVGYLERVVAAQKTLPGIYRVPVQEAHHRQDSGLLGAALWARTSL
>NC_006155.1|WP_011192748.1|3237989_3238460_-|YhcH/YjgK/YiaL-family-protein
MISGSLAQPAFFSGLPERLQWVLAYLADMPLAQLSCGRHEIDGELMFMNVMAFDTQPAESKKAELHRTYADVQLLISGIEGIEYSTLTPTEHLEPYHPDDDYQLIADIPDKSQLRMLPGMFAVFLPGEPHKPGCQITGSGAIKKVVVKVHYSLLNS
>NC_006155.1|WP_011192747.1|3236921_3237800_-|MurR/RpiR-family-transcriptional-regulator
MKTGAPRFKPGKILDALGAMQNSLTRSAQRIAAYILAQPAQVTQLSIADLSALTQAGEATIIRFCRTLGYKGFQDFKMDLAIEVATRHNSENSLLDADVQEGDDTLAIGSKLQSAINNVLSETLNLLSIESVEQVVKLLRPADRICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSGTSAETVQALKLAKEAGATTVALTHNMGSRITELADYVLINGNRQGQLQGDSIGTKIAQLFVLDLIYALLVKADPAQAESIKRKTTQAVSQNG
>NC_006155.1|WP_002231046.1|3234784_3236317_-|MFS-transporter
MSISVGPSREDKPLSGGAKPPRWYKQLTPAQWKAFVAAWIGYALDGFDFVLITLVLTDIKQEFGLTLIQATSLISAAFISRWFGGLVLGAMGDRYGRKLAMITSIVLFSFGTLACGLAPGYTTLFIARLIIGIGMAGEYGSSSTYVMESWPKNMRNKASGFLISGFSIGAVLAAQAYSYVVPAFGWRMLFYIGLLPIIFALWLRKNLPEAEDWEKAQSKQKKGKQVTDRNMVDILYRSHLSYLNIGLTIFAAVSLYLCFTGMVSTLLVVVLGILCAAIFIYFMVQTSGDRWPTGVMLMVVVFCAFLYSWPIQALLPTYLKMDLGYDPHTVGNILFFSGFGAAVGCCVGGFLGDWLGTRKAYVTSLLISQLLIIPLFAIQGSSILFLGGLLFLQQMLGQGIAGLLPKLLGGYFDTEQRAAGLGFTYNVGALGGALAPILGASIAQHLSLGTALGSLSFSLTFVVILLIGFDMPSRVQRWVRPSGLRMVDAIDGKPFSGAITAQHARVVTQK
>NC_006155.1|WP_002208512.1|3233414_3234452_-|sulfate-ABC-transporter-substrate-binding-protein
MKQNSVKKNARNGLTHIALFSALILSGVTASATELLNSSYDVSRELFTALNPGFQAQWEQQNPGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQITDVQILHDRGNLIPADWQARLPNNSSPFYSTMAFLVRKGNPKNIRNWDDLVREDVKLVFPNPKTSGNGRYTYLAAWGATQLADGGDEAKTRDWMKRFLKNVEVFDTGGRGATTTFVERGLGDVLISFESEVNNIRKEYGSDQYEVIVPPVDILAEFPVAWVDKNVEKNGTEKAAKAYLNYLYSPPAQQVITRFNYRVYDKAAMEAAKSQFPDTKLFRVEDQFGSWPQVMSTHFTTGGVLDKLLAEGHQ
>NC_006155.1|WP_002208511.1|3232581_3233415_-|sulfate/thiosulfate-ABC-transporter-permease-CysT
MLSASSKRVLPGFTLSLGSSLLYTCLILLLPLSALVMQVAQMSWAQYWEVITNPQVVAAYKVTLLAAGVASVFNAVFGMLMAWILTRYQFPGRSILDGLMDLPFALPTAVAGLTLATLFSTTGWYGAWLNEFGIKVSFTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGASRWQSFRLVVMPELAPALLAGTALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFIRLQEFDYPAASAIASVILAVSLALLFSINTLQSRFGRRIGGH
>NC_006155.1|WP_011192746.1|3231706_3232582_-|sulfate/thiosulfate-ABC-transporter-permease-CysW
MMDVSEFNGVARPPINWGKWTLIVIGAAFSFLLLVIPMVWIFITAFSKGIAVVGQNLLNPDMLHAIWLTVLVALITVPVNLVFGVVLAWLVTRFVFPGRQLLMTLIDIPFAVSPVVAGLMYLLFYGSNGVVGGWLDAHDIQLMFSWPGMVLVTIFVTCPFVVRELVPVMMSQGSQEDEAAVLLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETYTLPLQVELLHQDYNTAGAFTAAALLTLMAIVTLFLKSGLQWRLARQVVRLEQEQKHEH
>NC_006155.1|WP_011192745.1|3230625_3231717_-|sulfate/thiosulfate-ABC-transporter-ATP-binding-protein-CysA
MSIEINNISKYFGRTKVLNDITLDIPSGQMVALLGPSGSGKTTLLRIIAGLENQNAGRLSFHGTDVSRLHARDRRVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKQKVGQLLEMVQLGHLAERFPSQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQVGTPDEVWREPATRFVLEFLGEVNRLSGEIRGSQLFIGAHHWPLDLAPMHQGSVDLFLRPWEMEVSTQSSDRCPLPVQVLEVSPRGHFWQLTVQPIGWHQDPISVVLPEGNIDAPVRGNRYYVGGLNARLYSGNQLLQPIALAQSA
>NC_006155.1|WP_011192744.1|3229561_3230455_-|cysteine-synthase-CysM
MTTLEHCIGHTPLVKLQRLSQGLNAEIWVKLEGNNPAGSVKDRAALAMIQQAELRGDIAPGDVLIEATSGNTGIALAMIAAMKGYHLKLLMPENMSQERQAAMRAYGAELILVSREQGMEGARDLALTMQENGEGNVLDQFNNADNPYAHFTGTGPEIWQQTAGKVSHFVSSMGTTGTITGVSQYLKSQNPQVKVIGLQPAEGSSIPGIRRWSAEYIPGIFRPELVDQVLDITQSVAEQTMRRLAKEEGIFCGVSSGGAVAGALRIAVDNPDAVIVAIICDRGDRYLSTGVFLSKGG
>NC_006155.1|WP_002224818.1|3227009_3227717_+|response-regulator-transcription-factor
MKILIAEDNAHIRNGLMEVLAHEGYRPIAAENGVQALALYRQQQPDFIILDIMMPELDGYKVCREIRKHDWQTPIIFLSAKDEEIDRVIGLELGADDYISKPFGIHEMRARIKTIVRRCLRKVPESAEDAGFPFGDLMVFPNELCAIRGETRLELSLREVNILRYLYQHKGRVVTRDMLFDAVWGYDHLPQSRTLDQHISKLRKTIELDPVHPVLIRTVHGAGYRYQGTAQSLEK
>NC_006155.1|WP_071819112.1|3241044_3241791_+|N-acetylmannosamine-6-phosphate-2-epimerase
MELNFIYNFTSELKTVSNLSNLRHKLQNGLIASCQPVPGSAMDTPEIVAAMACAALAGGAVGLRIEGISNIQAVRRATDAPIIGIIKRDLPDSEVRITPWLEDIDALSAAGADIIAFDVTCRERPVSVADLYQRARATGCLTMADASNIDDGLLAHHLGIDFIGTTLSGYTQAIVPTEPDLALVTQLAQAGCRVIAEGRYHSPALAAAAISAGAYAVTVGSAITRIEHICGWFCDAIKQCETEKLTEY
>NC_006155.1|WP_002208518.1|3241853_3242747_+|dihydrodipicolinate-synthase-family-protein
MKKLTGLIAAPHTPFDEQGEVNYPVIDQIAEHLINDGVKGVYVCGTTGEGIHCSVDERKKIAERWVNAAQGKLSITLHTGALSIKDAVDLSRHAETLDIFATSAIGPCFFKPGNLDDLIAYCQAIAAAAPSKGFYYYHSGMSGVNLDMEQFLIKAESKIPNLSGIKFNNADLYEFQRCLRVSGGKFDIPFGVDEHLPGGLAVGAIGAVGSTYNYAAPLFHKIIADFNAGDQVAVQRGMDHVIALIRVLVEFGGVAAGKAAMQLHGIDAGNPRLPLRALTKEQKQTVVNRMRDAITLQ
>NC_006155.1|WP_011192751.1|3242844_3243744_-|Dyp-type-peroxidase
MTQVQSGILLEHCRFAIFMEAKVQGELDAIRLGCKKFCQSLQELQQQFPDEHLGAVIAFGSNVWHDLSNGQGAKELKPFVPLGKGLAPATQRDLLIHIQSLRQDINFTLAQAAVAAFGSAIAVEEETHGFRWVEERDFTGFIDGTENPQGDKRPEVAVIADGEEDAGGSYVLVQRYEHNLNKWQRIPENEQEKIIGRTKLDSQELPSDQRPETSHVSRVDLKENGKGLKILRQSLPYGLASGKHGLYFIAYCARLHNIEQQLLSMFGDIDGKHDQLLRFSKPVTGSYYFAPSLTALLSL
>NC_006155.1|WP_002208521.1|3243921_3244533_-|RpoE-regulated-lipoprotein
MNIRPRLSGVRLLLLSAPLLLAGCSTVSGFSWSSLSPLNWFSGSRSMQVTEQGVGGITASTLLTESDINAGLQGDYRLRSGMATNDGKLVSFYQALKEDQIKLVISGQPKGQVERIDVMDKGIPSQWGVTIGTPFSDLYKKAFGACHKGRGDDVNQVECVAPESKHVSYLFNGNWHGPEELMPSDDALQSWTVSKIIWRAKSE
>NC_006155.1|WP_002208522.1|3244895_3245309_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKLTLAATLIMLCGTPVLAQSASNTTQGGFDGPATTQTQPATQGGFTGPSASSTTVDKVKTMRDDARVTLQGYIEARLGHDTYTFRDSTGTITVEIDDKRWRGQTITPQDKVQIEGKVDKDWNSVEIDVKNITKIK
>NC_006155.1|WP_012303880.1|3245808_3248088_+|autotransporter-YapL
MNTNSKKTYLSIAISSILYASTAMNANADSCTDYTVTDICEQSKYGAGEFHNIKLGDGVTAGSEDHHFVFNGEGYELYNSNANFSAQIASGTIRYTEVNNSHFTVNAHHFPDDTIYAGRAENTTLNDSLMWVATSADQTLAKGNSMVVVSTQMAMVDQIFVTTLNDGSLPFDPVITNSRYEDTSYEMLWGMKNEAKGWDTKATSHDSVFVDASKQSIEANGHSIGATFYGRATQVVKAGGESQDTHLFDHSYSWVYAEAKLTGLTEVNDAATVYLNAAATQGAYAENVVLNGEDTTLMVRASLDNNAYATVDNLILNGGEVVFQQSSGDQYASLNIGTLSGSGSFLFNTSIAEGKGNFVTIANASGEHKVIVNDSGHEITSPDMTTLDLIHDLSGDATFTLASISGANIIEVDGGTYVYSLNTWDNSARAGGNLWYLGSGLNTGTELEPEPEEKTTPSTDAVLSMASSNQFIFDGEMQNLRFRKGDLNNNKGDGASVWGRYLTNNTRVNAAHDAAYRLQQDGFEIGADKVLEMSSGQLVLGGFTSYSNNRVKHARGGNSTVDSYSLGAYGTYFDNSGYYVDAVVKANRFKNSLNAHMTNGGSVQSDYNQNAIGGSLEAGYHYSLSNNWFVEPYVRTSYYTAQDKDIALNNGMTANIDNNRSAKGEIGTHLGTKIDLNNGAIIRPYAKVAIEREFIKSNTVTINQVNDFNNDLSGHTAKYGLGMDINLTKQTSVYAEANYRNGTHVESPIMANIGFRINF
>NC_006155.1|WP_011192753.1|3248179_3248596_-|hypothetical-protein
MNLKSKIFIFWGMMDLYYIVRYIWVSLSVGKIPFVSDINNFLPMDFSDLLIYRVIVIGSMLTTISVLFTAFFFLKNKKIAIMAAFIQEPFRLIFGVYSISLIPTVINALGMTILVTNLFFLFISEGLKIYTLLIARKM
>NC_006155.1|WP_011192754.1|3249393_3250119_-|hypothetical-protein
MLITWVSRKGLKRFKNNDAVALYENNKIFIAIAVDAAEKNNTSHESDLAKYWANAVIAECNFRIDSTSMLKIDINEIVAILREKQKNLRHNYLHETASYAVVFLDKELQVVTTLHCGDCLFGSQKNTPSINWLIKPHNTHQQQMQLLAAGCQCHSHAYSRFTLTRYLNARRFYTPELNEFPITDMEQLILSTDGYWAEHIGERIAWEKLEDDASVLRINLSEEKTLDIQSDCENFVTYTIY
>NC_006155.1|WP_011192755.1|3250121_3250829_-|hypothetical-protein
MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIEVPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLESRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYAIQSHTYGDKAREDEIYERLEKIIEIGK
>NC_006155.1|WP_011192756.1|3250825_3251497_-|MarR-family-transcriptional-regulator
MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDTSIDDWLVERYSVRALAAETGISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELIIYGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPVWPDAKGNTKGQSVEPLFKTATYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NC_006155_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_006155_9

4056248-4056327

Orphan

Consensus_repeat	Method
CAGCCGCAGCCACGCTCAGCCATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_006155_9

>merge|NC_006155|9|4056248-4056327|CRISPRCasFinder
CAGCCGCAGCCACGCTCAGCCATTCGACACCCATATCAGAATGACTGCGGCAACGCAGCCGCAGCCACGCTCAGCCATTC

>NC_006155|9|9|4056248-4056327|CRISPRCasFinder
CAGCCGCAGCCACGCTCAGCCATTC	GACACCCATATCAGAATGACTGCGGCAACG
CAGCCGCAGCCACGCTCAGCCATTC

Protein	Signature genes	Signature genes Name	Protein_function
NC_006155.1\|WP_002212199.1\|4054967_4055327_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	unknown	unknown	gnl\|CDD\|183219
NC_006155.1\|WP_002210363.1\|4066243_4066402_+\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002212198.1\|4053875_4054694_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NC_006155.1\|WP_002210359.1\|4060013_4061852_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NC_006155.1\|WP_011193102.1\|4062369_4062972_-\|terminase-small-subunit	unknown	unknown	gnl\|CDD\|226251
NC_006155.1\|WP_011193101.1\|4052401_4053640_+\|multifunctional-CCA-addition/repair-protein	unknown	unknown	gnl\|CDD\|182810
NC_006155.1\|WP_011193099.1\|4045424_4046855_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	unknown	unknown	gnl\|CDD\|183085
NC_006155.1\|WP_002212192.1\|4044137_4045388_-\|L-methionine/branched-chain-amino-acid-transporter	unknown	unknown	gnl\|CDD\|236823
NC_006155.1\|WP_002210360.1\|4062988_4063444_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_001144069.1\|4057756_4057972_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NC_006155.1\|WP_002210361.1\|4063470_4063941_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002210358.1\|4058107_4059856_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NC_006155.1\|WP_002214241.1\|4065458_4065689_-\|hypothetical-protein	unknown	unknown	unknown
NC_006155.1\|WP_002212201.1\|4056330_4057344_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NC_006155.1\|WP_002217581.1\|4055434_4056085_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NC_006155.1\|WP_011193100.1\|4051603_4052224_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|182809
NC_006155.1\|WP_002212195.1\|4049992_4051300_-\|inorganic-triphosphatase	unknown	unknown	gnl\|CDD\|225569
NC_006155.1\|WP_011193103.1\|4063949_4065326_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NC_006155.1\|WP_002212191.1\|4043531_4043813_+\|accessory-factor-UbiK-family-protein	unknown	unknown	gnl\|CDD\|225508
NC_006155.1\|WP_002212194.1\|4046989_4049845_-\|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase	unknown	unknown	gnl\|CDD\|236836

Protein	Function_ID	Function_description	E-value
NC_006155.1\|WP_002212199.1\|4054967_4055327_-\|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase	gnl\|CDD\|183219	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase.	2.02028e-82
NC_006155.1\|WP_002212198.1\|4053875_4054694_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	5.08833e-116
NC_006155.1\|WP_002210359.1\|4060013_4061852_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NC_006155.1\|WP_011193102.1\|4062369_4062972_-\|terminase-small-subunit	gnl\|CDD\|226251	COG3728, XtmA, Phage terminase, small subunit [DNA replication, recombination, and repair].	1.55282e-18
NC_006155.1\|WP_011193101.1\|4052401_4053640_+\|multifunctional-CCA-addition/repair-protein	gnl\|CDD\|182810	PRK10885, cca, multifunctional CCA addition/repair protein.	0
NC_006155.1\|WP_011193099.1\|4045424_4046855_-\|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE	gnl\|CDD\|183085	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE.	0
NC_006155.1\|WP_002212192.1\|4044137_4045388_-\|L-methionine/branched-chain-amino-acid-transporter	gnl\|CDD\|236823	PRK11021, PRK11021, putative transporter; Provisional.	0
NC_006155.1\|WP_001144069.1\|4057756_4057972_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.25342e-17
NC_006155.1\|WP_002210358.1\|4058107_4059856_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NC_006155.1\|WP_002212201.1\|4056330_4057344_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NC_006155.1\|WP_002217581.1\|4055434_4056085_+\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	6.06402e-111
NC_006155.1\|WP_011193100.1\|4051603_4052224_+\|SH3-domain-containing-protein	gnl\|CDD\|182809	PRK10884, PRK10884, SH3 domain-containing protein; Provisional.	6.8679e-147
NC_006155.1\|WP_002212195.1\|4049992_4051300_-\|inorganic-triphosphatase	gnl\|CDD\|225569	COG3025, COG3025, Uncharacterized conserved protein [Function unknown].	0
NC_006155.1\|WP_011193103.1\|4063949_4065326_-\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	2.55358e-06
NC_006155.1\|WP_002212191.1\|4043531_4043813_+\|accessory-factor-UbiK-family-protein	gnl\|CDD\|225508	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown].	1.21559e-35
NC_006155.1\|WP_002212194.1\|4046989_4049845_-\|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase	gnl\|CDD\|236836	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase.	0

>NC_006155.1|WP_002217581.1|4055434_4056085_+|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MSAIALGMIIFAYLCGSISSAILVCRVARLPDPRTHGSGNPGATNVLRIGGRTAAVAVLLFDILKGMLPVWIAYLLHIPPLYLGLTAIAACLGHIYPVFFHFKGGKGVATAFGAIAPIGWDLTGLMTGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVAMLSCLILMRHHDNIQRLWRGKEGKIWDKLRKKKQKTPAEEAAELEEKED
>NC_006155.1|WP_002212199.1|4054967_4055327_-|bifunctional-dihydroneopterin-aldolase/7,8-dihydroneopterin-epimerase
MDIVFIEELSVITTIGVYDWEQTIQQKLVFDIEMGWDNRKAAGSDDVNDCLSYADISEAVIQHVGSQRFALVERVAEEVAELLLRRFNSPWVRIKVSKPGAVAQAKNVGVIIERGQRLS
>NC_006155.1|WP_002212198.1|4053875_4054694_-|undecaprenyl-diphosphate-phosphatase
MTDMYSLFVAFILGVVEGLTEFLPVSSTGHMIIVGELLGFTGDKAKTFEVIIQLGSILAVVVVFWRRLFGLIGIHFGAVPHEGKTNGHLTLGHILLAMIPAVILGLAFHDVIKALFDPKSVMYALVAGGVLLLAAEWLKPKNPKAVGLDDITYRQAFAIGCFQCLALWPGFSRSGATISGGMLVGVNRYAASEFSFILAVPMMIGASGLDLYKSLHFLTLGDLPMFAVGFITAFIVALIAIKTFLSLIKRISFVPFAIYRFIVAAVVYWVFM
>NC_006155.1|WP_011193101.1|4052401_4053640_+|multifunctional-CCA-addition/repair-protein
MNIYLVGGAVRDSLLNLPVTEQDWVVVGATPEQLLKLGYQQVGKDFPVFLHPVSHEEYALARTERKSGQGYTGFTCYAAPDVTLEDDLLRRDLTVNAIARSADGEFIDPYHGKQDLENRVLRHVSDAFGEDPLRVLRVARFAARFAYLGFTIAPETMSLMSNMAQSGELSALTPERVWKETEKALKTQSPHVYFQVLRDCGALAVLFPEIERLFGVPAPEKWHPEIDTGIHTLMTLAIAAQLSPEVDIRFAALCHDLGKGLTPKEHWPHHHGHGPAGVKLVEQLCQRLRIPNPVRDLAKLVAEYHDLIHTVNKLRPETLLKLFNAIDVWRKPERLEQMIMTSEADARGRTGFENNPYPQGDYLRAAFQIANGVSIQEVVASGLQGLAIRDELQRRRQQALAEWKQTQETPLI
>NC_006155.1|WP_011193100.1|4051603_4052224_+|SH3-domain-containing-protein
MQKLRLICLTILSLSLSWGAQAEEKRYISDELDTYVHSGPGNQYRIVGTLKGGDEVTLISVDNGTNYGQIRDSKGKTTWIPLNQLSETPSLRVRVPDLEQQVKTLTDKLANIDNSWNQRTAEMQQKVAASDSVISELQKENESLKNQLIVAQKKVNAVNLQLDDKQRTIILQWFMYGGGVAGIGLLLGLVLPHLIPSRKKNNRWMN
>NC_006155.1|WP_002212195.1|4049992_4051300_-|inorganic-triphosphatase
MTVEIELKFIATPAAIAALPEWIESQKNQHFPPQTLANIYFDTADKRLRQNDIGLRIRGYDGRYEMTVKTGGKVVGGLHQRPEYNVDIDSDQLDLARFPQDIWPEGWAVDLLQAELQPLFRTDFTREKWVITYGESEIELALDQGSISADTLSEPLSEIELELKQGTQGDLLALAAELAKMGGLRQSNLSKAARGYHLAQGNPPRELRPFLVFQPVAKSTVEQGMAGGLESILEHWQYHEELWLRGEPAAKTMIIDALAMVRQSLAIFGGLVPRKASTELRALLIALEPQLEPKSVDAALLCYSVDYLKCKLALTSWLITAGWRPFMDAKAQAKFDGSFKRFCDIMLSRSAADLKEAFGHNLDDDGYLAQLPRLNRQLIAFQLLSGFYPQSEWHPYIDAWFGLQQAIMARQGHWRDTARKEALSQAAFWLNGAVR
>NC_006155.1|WP_002212194.1|4046989_4049845_-|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase
MLPLPSELQIQAQSIKQRFSELPAPPDLRDEDIAVLALSDFVSDMLLIHPQWLEELHQQPPQPQEWQYYSQWLSQALAGVQDEAALLTALRLFRRRVMVRIAWSQVLQTSGTAETLQQLSTLAESMIIAARDWLYQVCCRELGTPCNRQGVPQPLLILGMGKLGGGELNFSSDIDLIFAYPENGQTQGGRRELDNAQFFTRLGQRLIKALDQHTIDGFVYRVDMRLRPFGDSGPLVLSFAALEDYYQEQGRDWERYAMVKARLMGGADDPYSQELRQMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLKDNIKLGAGGIREIEFITQVFQLIRGGREPRLQERALLPTLQAVAELGLLPEQQVADLSGSYLFLRRLENLLQAIADEQTQTLPNDPLNQARLAWGMGYADWAAMSTALENHMQAVRVVFDDLIGDETPDIGEDPSHGLYKSLWQDVLEESDLAPLTPHLEEAARRQLLATISGFRHDVDKRTIGPRGREVLDQLMPRLFAEVCPRPDANVALSRLILLLLSIVTRTTYLELLVEYHAALKHVIRLCSASPMVASQLARYPLLLDELLDPQSLYQPLAPSAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQQLRIAAGDITEALPVMKVSDHLTYLAEAIIDAVIQQAWNQMVARYGQPSHLQQSEGRGFAVIGYGKLGGWELGYSSDLDLVFLLDCPLDVMTDGDRSIDGRQFYLRLAQRIMHLFSTRTSSGILYEVDARLRPSGEAGMLVSTIEAFADYQRNEAWTWEHQALVRARIVYGSPKLHQQFDAIRQQILCRHREDPQLQQEVREMREKMRNHLGSKQRDIFDIKADAGGITDIEFIAQYLVLRYAASEPRLTRWSDNVRIFESMAHYDIMSPEEAAALTRAYVTMRDEIHHLALQEQSSKVAADSFIAEREQVAASWHKWLAANDANVS
>NC_006155.1|WP_011193099.1|4045424_4046855_-|bifunctional-D-glycero-beta-D-manno-heptose-7-phosphate-kinase/D-glycero-beta-D-manno-heptose-1-phosphate-adenylyltransferase-HldE
MKVTLPDFRRAGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVSPIELENAIRGRAETGFGVMDEQQLKIAVAQARQRGEKVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAGGEVKVLNFEDGVSTTNIIQSIKNGRG
>NC_006155.1|WP_002212192.1|4044137_4045388_-|L-methionine/branched-chain-amino-acid-transporter
MGGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAMLAGHDSLWAWPVLIVLVFPIAIAFAALGRHFPSAGGAAHFVAIAFGPKLGKVTGWLFLSVIPVGLPAALQIAAGFWQAMFGWSDTGLLMVQLVTLLVIWLLGTRSAGSSANLQTVIALLVIALVAAIWWQGDIRLSQIPWPALQDVSPPNIFNALAVMFWCFVGLEAFAHLATEFRHPERDFPRALIVGLLVAGAVYWGCTVAVLHFQAYGESQAAAASLPGIVVQLFGEHALWIACIIGYLACFASVNIYTQSFARMVWSQSQVRPQSKLARLSAGQTPVNALTAVVGSCLVFALLIYWLALPLDLLIVYANGIFVLIYLLCMLAGIRLLSGRARVMSVIGSLLCCVLLVMIGWKSVYALLMFALLWMLMSKPKTQLTQP
>NC_006155.1|WP_002212191.1|4043531_4043813_+|accessory-factor-UbiK-family-protein
MIDPKKIEQIARQVHESMPKGIREFGEDVEKKIRLILQSQLTRLDLVNREEFDVQTQVLLRTREKLALLEQRVGALEAKFNSAPADHGEKTGE
>NC_006155.1|WP_002212201.1|4056330_4057344_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MRVLGIETSCDETGIAVYDDKAGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEANLSAKDIDAVAYTAGPGLVGALLVGATIGRALAFAWGVPAVPVHHMEGHLLAPMLEENAPEFPFVALLVSGGHTQLISVTGIGEYLLLGESVDDAAGEAFDKTAKLLGLDYPGGPMLSRMAQQGTVGRFTFPRPMTDRPGLDFSFSGLKTFAANTIRANGDDDQTRADIARAFEDAVVDTLAIKSKRALDQTGFKRLVIAGGVSANQTLRLKLADMMQKRGGEVFYARPEFCTDNGAMIAYAGMVRLRSNLNSELSVSVRPRWPLSELPKV
>NC_006155.1|WP_001144069.1|4057756_4057972_+|30S-ribosomal-protein-S21
MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
>NC_006155.1|WP_002210358.1|4058107_4059856_+|DNA-primase
MAGRIPRVFINDLLARTDIIDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGEKQFYHCFGCGAHGNAVDFLMNYDRLEFVESIEELATMHGLEVPYEAGSGTTQIERHQRQSLYQLMESLSAFYQQSLKGQNAKQAREYLKHRGLSEEIIQHFAIGFAPPGWDNALKRFGRDGESRTALNDAGMLVTNDTGRTYDRFRERVMFPIRDKRGRVIAFGGRILGDGVPKYLNSPETEIFHKGRQLYGLYEAQVNHPNPTRLLVVEGYMDVVALAQFGIDYAVASLGTATTAEHIQLLFRATDNVICCYDGDRAGRDAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLVRKEGKDAFEQRMEAAQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLISQVPGEALRLYLRQQLGNKLGLLDDSQLDKLMPKQIDNANTYQPPQLKRTTMRILIGLLVQNPQLATLIPSLQGLEQAKLAGLPLFIELVETCLAQPGLTTGQLLELYRDNKFSQQLETLATWNHMIVEDMVEPTFVDTLASLYDSILEQRQETLIARDRTHGLNAEERKELWSLNLALARKK
>NC_006155.1|WP_002210359.1|4060013_4061852_+|RNA-polymerase-sigma-factor-RpoD
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVLEEAPDADDLMLAENTTDTDDDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGESRLSDLITGFVDPNAEEDIAPTATHVGSELSTEEMDDEDEDEDEDDDAEDDNSIDPELARQKFSDLREQYENARMEIKKNGRNHANAAAEILKLSEVFKQFRLVPKQFDYLVNNMRAMMDRVRTQERIIMKLCVEQCKMPKKNFVTLFSSNETSDTWFNAAVAMGKPWSEKLKDVSEDVQRSLQKLRQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
>NC_006155.1|WP_011193102.1|4062369_4062972_-|terminase-small-subunit
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSKASQLVTNSNVQAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKDIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAEMCGWEAPKKAELTGPNGGPIQTSNLTPDEAAEAYRKMMG
>NC_006155.1|WP_002210360.1|4062988_4063444_-|hypothetical-protein
MANLEKAVNEFTRISKSMGYNINPPYTGKLETYDFGRDISPEQPDFWKQYGSFLRISNGSFADGCVFYGMSGGEDDAGLIEFNNALNIPDFKDETMTGLIVIGGNNTDTFYYDPRTGKWEACDRIGTDRVWESCDSLAELIETQIKMLENG
>NC_006155.1|WP_002210361.1|4063470_4063941_-|hypothetical-protein
MTDIEKAVTTFQAYRAAIGYPKIPPYEGEVIEYDFGRKIESNQPDFWTQYHEFLRLSDGLAADGVYFYGIACEGKLIGNRLIDNNDALRDGEMYDESMDGLIAIGSSNSDIFVYDTNTHKWESRDRIAIDDINESYDTLAELIDSQLQRINIGDAF
>NC_006155.1|WP_011193103.1|4063949_4065326_-|HNH-endonuclease
MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSRYLINMREREQRFSPDQPRPGGIREKEKLEKLVFSGDVVMLSDMYGPARLFYINGEGQLMSADPHAFRFEGAAKIIKAFDDGVKCRNYQRTGGKPRSTKSPMKVRPSVSERSMITRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKATTEAARGRIADSAVGTLEGLGTLMGPSAQEYMAGAFNPEQAAINKVRQQNQQAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEKVGTLGDVAKLGKAVELEKLEGYLGTYKGQKVLLQNVDVVRMDYVRRSTADRNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQVHHKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWPKPQGIIYP
>NC_006155.1|WP_002214241.1|4065458_4065689_-|hypothetical-protein
MDTLTTATPSVHRKYFRHILGACGSCYFERQAGKFILGEEGDQFFSAYVREDSAYRIERMESESPLGYQTSGAIPV
>NC_006155.1|WP_002210363.1|4066243_4066402_+|hypothetical-protein
MTKKTAHSQITKTQIYRAVASSTAIETGVSVQKIEQQLKQNLAQAKAVGLAR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_006155_6	6.13\|2965178\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965178-2965209	32	MK733259	Yersinia phage YeP1, complete genome	32012-32043	0	1.0
NC_006155_6	6.13\|2965178\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965178-2965209	32	MK733261	Yersinia phage YeP3, complete genome	32272-32303	0	1.0
NC_006155_6	6.13\|2965178\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965178-2965209	32	MK733260	Yersinia phage YeP2, complete genome	32272-32303	0	1.0
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	MN908687	Gordonia phage Skog, complete genome	54547-54578	7	0.781
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_CP047261	Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence	103286-103317	7	0.781
NC_006155_6	6.19\|2964635\|33\|NC_006155\|PILER-CR	2964635-2964667	33	MN908687	Gordonia phage Skog, complete genome	54546-54578	7	0.788
NC_006155_3	3.1\|365887\|33\|NC_006155\|CRISPRCasFinder	365887-365919	33	NZ_KX274135	Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence	60674-60706	8	0.758
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	NZ_CP048351	Raoultella ornithinolytica strain 23 plasmid p23_B, complete sequence	4168-4199	8	0.75
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	NZ_CP026272	Klebsiella oxytoca strain KONIH4 plasmid pKPC-f607, complete sequence	92695-92726	8	0.75
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	NZ_CP007735	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-a41, complete sequence	68980-69011	8	0.75
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	MF403007	Agrobacterium phage Atu_ph04, complete genome	115577-115608	8	0.75
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	NZ_CP049247	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed1, complete sequence	41586-41617	8	0.75
NC_006155_6	6.4\|2964636\|32\|NC_006155\|CRISPRCasFinder,CRT	2964636-2964667	32	NZ_CP049252	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence	24941-24972	8	0.75
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	493743-493775	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	71711-71743	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	9432-9464	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	9277-9309	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	9372-9404	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	9372-9404	8	0.758
NC_006155_6	6.8\|2964877\|33\|NC_006155\|CRISPRCasFinder,CRT	2964877-2964909	33	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	9277-9309	8	0.758
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_MK851048	Morganella morganii strain MM1L5 plasmid pMM1L5, complete sequence	38133-38164	8	0.75
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_MK851047	Actinobacillus pleuropneumoniae strain APP1L5 plasmid pAPP1L5, complete sequence	55096-55127	8	0.75
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_CP046258	Gordonia sp. 135 plasmid pG135, complete sequence	144061-144092	8	0.75
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	16688-16719	8	0.75
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_CP047236	Gordonia sp. JH63 plasmid pJH63-1, complete sequence	141055-141086	8	0.75
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	MK002701	Halobacterium phage phiH variant phiH1, complete genome	29544-29575	8	0.75
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	191666-191697	8	0.75
NC_006155_6	6.19\|2964635\|33\|NC_006155\|PILER-CR	2964635-2964667	33	NZ_CP048351	Raoultella ornithinolytica strain 23 plasmid p23_B, complete sequence	4168-4200	8	0.758
NC_006155_6	6.19\|2964635\|33\|NC_006155\|PILER-CR	2964635-2964667	33	NZ_CP026272	Klebsiella oxytoca strain KONIH4 plasmid pKPC-f607, complete sequence	92695-92727	8	0.758
NC_006155_6	6.19\|2964635\|33\|NC_006155\|PILER-CR	2964635-2964667	33	NZ_CP007735	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-a41, complete sequence	68980-69012	8	0.758
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NZ_MK851048	Morganella morganii strain MM1L5 plasmid pMM1L5, complete sequence	38132-38164	8	0.758
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NZ_MK851047	Actinobacillus pleuropneumoniae strain APP1L5 plasmid pAPP1L5, complete sequence	55095-55127	8	0.758
NC_006155_6	6.2\|2964516\|32\|NC_006155\|CRISPRCasFinder,CRT	2964516-2964547	32	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	47746-47777	9	0.719
NC_006155_6	6.3\|2964576\|32\|NC_006155\|CRISPRCasFinder,CRT	2964576-2964607	32	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	148834-148865	9	0.719
NC_006155_6	6.7\|2964817\|32\|NC_006155\|CRISPRCasFinder,CRT	2964817-2964848	32	NZ_CP022420	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence	118938-118969	9	0.719
NC_006155_6	6.7\|2964817\|32\|NC_006155\|CRISPRCasFinder,CRT	2964817-2964848	32	NZ_CP016367	Phaeobacter porticola strain P97 plasmid pP97_c, complete sequence	27757-27788	9	0.719
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NZ_CP017672	Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence	101627-101658	9	0.719
NC_006155_6	6.14\|2965238\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965238-2965269	32	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	214799-214830	9	0.719
NC_006155_6	6.19\|2964635\|33\|NC_006155\|PILER-CR	2964635-2964667	33	MF403007	Agrobacterium phage Atu_ph04, complete genome	115576-115608	9	0.727
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	493742-493775	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	71711-71744	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	9431-9464	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	9276-9309	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	9371-9404	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	9371-9404	9	0.735
NC_006155_6	6.23\|2964876\|34\|NC_006155\|PILER-CR	2964876-2964909	34	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	9276-9309	9	0.735
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NZ_CP046258	Gordonia sp. 135 plasmid pG135, complete sequence	144060-144092	9	0.727
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	16688-16720	9	0.727
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NZ_CP047236	Gordonia sp. JH63 plasmid pJH63-1, complete sequence	141054-141086	9	0.727
NC_006155_6	6.6\|2964757\|32\|NC_006155\|CRISPRCasFinder,CRT	2964757-2964788	32	CP033541	Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-1, complete sequence	100094-100125	10	0.688
NC_006155_6	6.6\|2964757\|32\|NC_006155\|CRISPRCasFinder,CRT	2964757-2964788	32	MG602477	Bacillus phage BCP01, complete genome	141195-141226	10	0.688
NC_006155_6	6.6\|2964757\|32\|NC_006155\|CRISPRCasFinder,CRT	2964757-2964788	32	KX495186	Bacillus phage PK16, complete genome	37124-37155	10	0.688
NC_006155_6	6.9\|2964938\|32\|NC_006155\|CRISPRCasFinder,CRT	2964938-2964969	32	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	196816-196847	10	0.688
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	MH051335	Escherichia phage vB_EcoM-Ro157lw, complete genome	26006-26037	10	0.688
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	JX128258	Escherichia phage ECML-117, complete genome	31049-31080	10	0.688
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	MK903282	Escherichia phage Mansfield, complete genome	26213-26244	10	0.688
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	MT446408	UNVERIFIED: Escherichia virus TH35, complete genome	29763-29794	10	0.688
NC_006155_6	6.12\|2965118\|32\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965118-2965149	32	NC_048073	Escherichia phage FEC19, complete genome	44338-44369	10	0.688
NC_006155_6	6.17\|2964515\|33\|NC_006155\|PILER-CR	2964515-2964547	33	NZ_CP032703	Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence	47746-47778	10	0.697
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NZ_CP017672	Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence	101627-101659	10	0.697
NC_006155_6	6.24\|2964937\|33\|NC_006155\|PILER-CR	2964937-2964969	33	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	196815-196847	10	0.697
NC_006155_6	6.15\|2965298\|33\|NC_006155\|CRISPRCasFinder,CRT,PILER-CR	2965298-2965330	33	NC_015903	Borreliella bissettii DN127 plasmid cp32-11, complete sequence	27059-27091	11	0.667

1. spacer 6.13|2965178|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MK733259 (Yersinia phage YeP1, complete genome) position: , mismatch: 0, identity: 1.0

atctccggagagttcaactgtggggtggtgta	CRISPR spacer
atctccggagagttcaactgtggggtggtgta	Protospacer
********************************

2. spacer 6.13|2965178|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MK733261 (Yersinia phage YeP3, complete genome) position: , mismatch: 0, identity: 1.0

atctccggagagttcaactgtggggtggtgta	CRISPR spacer
atctccggagagttcaactgtggggtggtgta	Protospacer
********************************

3. spacer 6.13|2965178|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MK733260 (Yersinia phage YeP2, complete genome) position: , mismatch: 0, identity: 1.0

atctccggagagttcaactgtggggtggtgta	CRISPR spacer
atctccggagagttcaactgtggggtggtgta	Protospacer
********************************

4. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to MN908687 (Gordonia phage Skog, complete genome) position: , mismatch: 7, identity: 0.781

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
catcacaatgcgctggaggacgcccggcatct	Protospacer
*********** ***** *****    ****

5. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP047261 (Pseudomonas syringae pv. maculicola str. ES4326 plasmid pPma4326F, complete sequence) position: , mismatch: 7, identity: 0.781

gttttttcgaccttttcctccatcagcgaggc-	CRISPR spacer
gtttttttgaccttttcatccat-gacgaccca	Protospacer
*******.********* ***** ..***  *

6. spacer 6.19|2964635|33|NC_006155|PILER-CR matches to MN908687 (Gordonia phage Skog, complete genome) position: , mismatch: 7, identity: 0.788

ccatcacaatgctctggatgacgcaattcatca	CRISPR spacer
ccatcacaatgcgctggaggacgcccggcatct	Protospacer
************ ***** *****    ****

7. spacer 3.1|365887|33|NC_006155|CRISPRCasFinder matches to NZ_KX274135 (Staphylococcus arlettae strain SA-01 plasmid pSA-01, complete sequence) position: , mismatch: 8, identity: 0.758

attacgcgttttactgataaccccatgccaaag	CRISPR spacer
aaaaatcgttttgctgataacctcatgccattg	Protospacer
*  *  ******.*********.*******  *

8. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP048351 (Raoultella ornithinolytica strain 23 plasmid p23_B, complete sequence) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
cgttttaatgctctgtatgaagcaattcatgt	Protospacer
*.*. .********* **** *********

9. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP026272 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-f607, complete sequence) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
cgttttaatgctctgtatgaagcaattcatgt	Protospacer
*.*. .********* **** *********

10. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP007735 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-a41, complete sequence) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
cgttttaatgctctgtatgaagcaattcatgt	Protospacer
*.*. .********* **** *********

11. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to MF403007 (Agrobacterium phage Atu_ph04, complete genome) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca-	CRISPR spacer
catcacaatgctctcgacgacgc-atgggccgg	Protospacer
************** **.***** **  ..*.

12. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP049247 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
gctcacaatgcgctcgatgacgcaaaagctca	Protospacer
  ********* ** **********    ***

13. spacer 6.4|2964636|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP049252 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

catcacaatgctctggatgacgcaattcatca	CRISPR spacer
gctcacaatgcgctcgatgacgcaaaagctca	Protospacer
  ********* ** **********    ***

14. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

15. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

16. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

17. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

18. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

19. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

20. spacer 6.8|2964877|33|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 8, identity: 0.758

agtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
tatcagggctatgagcgggatgcaatgactgca	Protospacer
 .************* *** *******. .**.

21. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_MK851048 (Morganella morganii strain MM1L5 plasmid pMM1L5, complete sequence) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttttctcgaccttctcctccatcaggttact	Protospacer
*****.********.***********   . .

22. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_MK851047 (Actinobacillus pleuropneumoniae strain APP1L5 plasmid pAPP1L5, complete sequence) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttttctcgaccttctcctccatcaggttact	Protospacer
*****.********.***********   . .

23. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP046258 (Gordonia sp. 135 plasmid pG135, complete sequence) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
ttgaggttgaccttgccctccatcagcgaggc	Protospacer
 *    *.****** .****************

24. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
ttgaggttgaccttgccctccatcagcgaggc	Protospacer
 *    *.****** .****************

25. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP047236 (Gordonia sp. JH63 plasmid pJH63-1, complete sequence) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
ttgaggttgaccttgccctccatcagcgaggc	Protospacer
 *    *.****** .****************

26. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to MK002701 (Halobacterium phage phiH variant phiH1, complete genome) position: , mismatch: 8, identity: 0.75

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
tgtatctcgaccttttggtccatcagcgatga	Protospacer
  * *.**********  *********** *

27. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.75

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
gcttctttcttgtcaatctctgactgaggttc	Protospacer
*** **************.***** *.  .*.

28. spacer 6.19|2964635|33|NC_006155|PILER-CR matches to NZ_CP048351 (Raoultella ornithinolytica strain 23 plasmid p23_B, complete sequence) position: , mismatch: 8, identity: 0.758

ccatcacaatgctctggatgacgcaattcatca	CRISPR spacer
ccgttttaatgctctgtatgaagcaattcatgt	Protospacer
**.*. .********* **** *********

29. spacer 6.19|2964635|33|NC_006155|PILER-CR matches to NZ_CP026272 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-f607, complete sequence) position: , mismatch: 8, identity: 0.758

ccatcacaatgctctggatgacgcaattcatca	CRISPR spacer
ccgttttaatgctctgtatgaagcaattcatgt	Protospacer
**.*. .********* **** *********

30. spacer 6.19|2964635|33|NC_006155|PILER-CR matches to NZ_CP007735 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-a41, complete sequence) position: , mismatch: 8, identity: 0.758

ccatcacaatgctctggatgacgcaattcatca	CRISPR spacer
ccgttttaatgctctgtatgaagcaattcatgt	Protospacer
**.*. .********* **** *********

31. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NZ_MK851048 (Morganella morganii strain MM1L5 plasmid pMM1L5, complete sequence) position: , mismatch: 8, identity: 0.758

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
cgttttctcgaccttctcctccatcaggttact	Protospacer
******.********.***********   . .

32. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NZ_MK851047 (Actinobacillus pleuropneumoniae strain APP1L5 plasmid pAPP1L5, complete sequence) position: , mismatch: 8, identity: 0.758

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
cgttttctcgaccttctcctccatcaggttact	Protospacer
******.********.***********   . .

33. spacer 6.2|2964516|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagagtgttttttctgacgatgttccttgctg	CRISPR spacer
cagagtgttttttctgccgacgttctgctttc	Protospacer
.*************** ***.****. . .*

34. spacer 6.3|2964576|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ccagagcctcctgatacatctgatcccacagt	CRISPR spacer
cgagagcctgctgatccatctgatcgcgggac	Protospacer
* ******* ***** ********* *. ...

35. spacer 6.7|2964817|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP022420 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-5, complete sequence) position: , mismatch: 9, identity: 0.719

tgaaagggatcgggctgaatgcgcaagacgcg	CRISPR spacer
ccaaagagatcgggctgaatgctcatgcggta	Protospacer
. ****.*************** ** *  *..

36. spacer 6.7|2964817|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP016367 (Phaeobacter porticola strain P97 plasmid pP97_c, complete sequence) position: , mismatch: 9, identity: 0.719

tgaaagggatcgggctgaatgcgcaagacgcg	CRISPR spacer
ccaaagagatcgggctgaatgctcatgcggta	Protospacer
. ****.*************** ** *  *..

37. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NZ_CP017672 (Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence) position: , mismatch: 9, identity: 0.719

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttttttcgactttttcttccatcaagttact	Protospacer
***********.*****.*******.   . .

38. spacer 6.14|2965238|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 9, identity: 0.719

ttaagcatcacacagccgatggtgtggttgat	CRISPR spacer
caacgatgtacacagccgatggtgtggcggat	Protospacer
. * *   .******************. ***

39. spacer 6.19|2964635|33|NC_006155|PILER-CR matches to MF403007 (Agrobacterium phage Atu_ph04, complete genome) position: , mismatch: 9, identity: 0.727

ccatcacaatgctctggatgacgcaattcatca-	CRISPR spacer
acatcacaatgctctcgacgacgc-atgggccgg	Protospacer
 ************** **.***** **  ..*.

40. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

41. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

42. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

43. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

44. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

45. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

46. spacer 6.23|2964876|34|NC_006155|PILER-CR matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.735

cagtcagggctatgagggggctgcaatgggcgcg	CRISPR spacer
atatcagggctatgagcgggatgcaatgactgca	Protospacer
  .************* *** *******. .**.

47. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NZ_CP046258 (Gordonia sp. 135 plasmid pG135, complete sequence) position: , mismatch: 9, identity: 0.727

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttgaggttgaccttgccctccatcagcgaggc	Protospacer
  *    *.****** .****************

48. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 9, identity: 0.727

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttgaggttgaccttgccctccatcagcgaggc	Protospacer
  *    *.****** .****************

49. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NZ_CP047236 (Gordonia sp. JH63 plasmid pJH63-1, complete sequence) position: , mismatch: 9, identity: 0.727

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
gttgaggttgaccttgccctccatcagcgaggc	Protospacer
  *    *.****** .****************

50. spacer 6.6|2964757|32|NC_006155|CRISPRCasFinder,CRT matches to CP033541 (Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-1, complete sequence) position: , mismatch: 10, identity: 0.688

taaagaccgttgaatttaaacaaggtatcaac	CRISPR spacer
gctgagccgttaaatttaaacaaagtatctgc	Protospacer
   ...*****.***********.***** .*

51. spacer 6.6|2964757|32|NC_006155|CRISPRCasFinder,CRT matches to MG602477 (Bacillus phage BCP01, complete genome) position: , mismatch: 10, identity: 0.688

taaagaccgttgaatttaaacaaggtatcaac	CRISPR spacer
ccacaaccgatgaatttaaacatggtattcct	Protospacer
. * .**** ************ *****.  .

52. spacer 6.6|2964757|32|NC_006155|CRISPRCasFinder,CRT matches to KX495186 (Bacillus phage PK16, complete genome) position: , mismatch: 10, identity: 0.688

taaagaccgttgaatttaaacaaggtatcaac	CRISPR spacer
ccacaaccgatgaatttaaacatggtattcct	Protospacer
. * .**** ************ *****.  .

53. spacer 6.9|2964938|32|NC_006155|CRISPRCasFinder,CRT matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

gttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
tgcaagacgaccttttcctccatgtgcgaggt	Protospacer
  .    ****************  ******.

54. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MH051335 (Escherichia phage vB_EcoM-Ro157lw, complete genome) position: , mismatch: 10, identity: 0.688

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
tctgctttctggtcaatctctgaccataacga	Protospacer
 ********* *******.***** .   *

55. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to JX128258 (Escherichia phage ECML-117, complete genome) position: , mismatch: 10, identity: 0.688

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
tctgctttctggtcaatctctgaccataacga	Protospacer
 ********* *******.***** .   *

56. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MK903282 (Escherichia phage Mansfield, complete genome) position: , mismatch: 10, identity: 0.688

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
tctgctttctggtcaatctctgaccataacga	Protospacer
 ********* *******.***** .   *

57. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to MT446408 (UNVERIFIED: Escherichia virus TH35, complete genome) position: , mismatch: 10, identity: 0.688

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
tctgctttctggtcaatctctgaccataacga	Protospacer
 ********* *******.***** .   *

58. spacer 6.12|2965118|32|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to NC_048073 (Escherichia phage FEC19, complete genome) position: , mismatch: 10, identity: 0.688

gctgctttcttgtcaatccctgacgggttctt	CRISPR spacer
tctgctttctggtcaatctctgaccataacga	Protospacer
 ********* *******.***** .   *

59. spacer 6.17|2964515|33|NC_006155|PILER-CR matches to NZ_CP032703 (Pantoea dispersa strain DSM 32899 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

ctagagtgttttttctgacgatgttccttgctg	CRISPR spacer
gcagagtgttttttctgccgacgttctgctttc	Protospacer
 .*************** ***.****. . .*

60. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NZ_CP017672 (Providencia rettgeri strain RB151 plasmid pRB151-NDM, complete sequence) position: , mismatch: 10, identity: 0.697

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
ggttttttcgactttttcttccatcaagttact	Protospacer
 ***********.*****.*******.   . .

61. spacer 6.24|2964937|33|NC_006155|PILER-CR matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

cgttttttcgaccttttcctccatcagcgaggc	CRISPR spacer
ctgcaagacgaccttttcctccatgtgcgaggt	Protospacer
*  .    ****************  ******.

62. spacer 6.15|2965298|33|NC_006155|CRISPRCasFinder,CRT,PILER-CR matches to NC_015903 (Borreliella bissettii DN127 plasmid cp32-11, complete sequence) position: , mismatch: 11, identity: 0.667

ccggatagcgaaacttaatgaaaatattatcgc	CRISPR spacer
taaaatagagaaaattaatgaaaatattgataa	Protospacer
. ..**** **** **************. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

732044 : 796010

Bodo_saltans_virus(11.11%)

transposase,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210509.1\|732044_734861_+\|tRNA	isoleucine--tRNA ligase	A0A2H4UVG0	Bodo_saltans_virus	1.0e-63	26.1
WP_002210508.1\|734860_735370_+	signal peptidase II	NA	NA	NA	NA
WP_002228112.1\|735437_735896_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_011191701.1\|735876_736830_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_002213775.1\|737059_737518_+\|transposase	IS200/IS605-like element IS1541B family transposase	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5
WP_002210504.1\|738008_738830_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_002224759.1\|739302_740478_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.9e-51	34.3
WP_011191702.1\|740493_743727_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_011191703.1\|743952_744567_-	LysE family translocator	NA	NA	NA	NA
WP_011191704.1\|744881_745682_+	threonine/serine exporter ThrE family protein	NA	NA	NA	NA
WP_032466075.1\|745678_746143_+	threonine/serine exporter	NA	NA	NA	NA
WP_002210497.1\|746292_746775_+	type 3 dihydrofolate reductase	A0A219UQN5	Bacillus_phage	4.7e-30	42.6
WP_011191707.1\|747613_748078_+	DUF3757 domain-containing protein	NA	NA	NA	NA
WP_011191708.1\|748167_749037_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	NA	NA	NA
WP_011191709.1\|749053_749431_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_011191710.1\|749444_750263_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_011191711.1\|750255_751251_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_002210488.1\|751234_752539_-	peptidylprolyl isomerase SurA	NA	NA	NA	NA
WP_011191712.1\|752606_754949_-	LPS assembly protein LptD	NA	NA	NA	NA
WP_011191713.1\|755133_755967_+	co-chaperone DjlA	NA	NA	NA	NA
WP_002210485.1\|756283_756904_-\|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA	NA	NA	NA
WP_002214747.1\|758126_758870_-	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_002210482.1\|759199_760213_+	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_002210481.1\|760223_760784_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_002210480.1\|760792_762295_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_002210479.1\|762457_762976_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_002210478.1\|763049_763493_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_011191714.1\|763525_765370_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_002210476.1\|765362_766346_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_002210475.1\|766363_768952_+	type VI secretion system ATPase TssH	A0A248SJW6	Salicola_phage	1.9e-77	28.7
WP_011191715.1\|769055_771404_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.1e-14	32.9
WP_011191716.1\|771416_773636_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_002214739.1\|773661_774765_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_002210473.1\|774757_775375_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_002214737.1\|775380_775746_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_011191717.1\|775738_776230_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_002210470.1\|776349_777705_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_011191718.1\|777701_779312_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_002210468.1\|782836_783190_+	hypothetical protein	NA	NA	NA	NA
WP_011191719.1\|783445_786352_-	RNA polymerase-associated protein RapA	A0A1B1IUI1	uncultured_Mediterranean_phage	6.8e-23	37.1
WP_011191720.1\|786812_789182_-	DNA polymerase II	A0A0P0YM26	Yellowstone_lake_phycodnavirus	1.1e-31	25.5
WP_002210465.1\|789377_790145_+	DedA family protein	NA	NA	NA	NA
WP_011191721.1\|790213_790924_-	thiamine ABC transporter ATP-binding protein ThiQ	G3M9Y6	Bacillus_virus	1.3e-20	34.1
WP_011191722.1\|790910_792518_-	thiamine/thiamine pyrophosphate ABC transporter permease ThiP	NA	NA	NA	NA
WP_002214274.1\|792493_793486_-	thiamine ABC transporter substrate binding subunit	NA	NA	NA	NA
WP_011191723.1\|794131_795634_+	hypothetical protein	NA	NA	NA	NA
WP_012413474.1\|795878_796010_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

928274 : 936132

uncultured_Mediterranean_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011191778.1\|928274_929039_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	4.2e-57	46.7
WP_002209395.1\|929032_929659_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	9.1e-34	49.4
WP_012304557.1\|929780_930764_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	2.3e-07	35.6
WP_011191780.1\|930818_931817_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	3.6e-32	37.3
WP_002209743.1\|932042_933251_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.4e-51	50.8
WP_011191781.1\|933576_936132_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.4e-26	22.8

DBSCAN-SWA_3

1491806 : 1536840

Pseudomonas_phage(25.0%)

plate,protease,coat,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210815.1\|1491806_1492316_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_002210816.1\|1492350_1492608_-	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	4.0e-20	54.9
WP_002210817.1\|1492611_1493742_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	7.6e-172	78.6
WP_011191994.1\|1493903_1496192_-	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	1.9e-286	64.9
WP_002210820.1\|1496685_1497414_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
WP_011191995.1\|1497713_1500407_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	1.4e-102	34.4
WP_011171779.1\|1500594_1503468_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	3.8e-42	28.3
WP_002210824.1\|1503535_1504189_-	transcriptional regulator RcsB	NA	NA	NA	NA
WP_011191996.1\|1504191_1506885_-	phosphotransferase RcsD	NA	NA	NA	NA
WP_002210825.1\|1506908_1508063_-	MFS transporter	NA	NA	NA	NA
WP_012413583.1\|1509166_1510282_+	porin OmpC	Q1MVN1	Enterobacteria_phage	3.3e-111	57.8
WP_002228026.1\|1511021_1512188_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA
WP_011191998.1\|1512462_1513989_-	MFS transporter	NA	NA	NA	NA
WP_002230695.1\|1514365_1515394_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_002208868.1\|1515467_1517255_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.0e-10	63.5
WP_011191999.1\|1517661_1518597_-	omptin family outer membrane beta-barrel protein YcoB	NA	NA	NA	NA
WP_002208866.1\|1518768_1519011_-	DinI family protein	K7PKR6	Enterobacteria_phage	6.9e-22	65.0
WP_002208864.1\|1519216_1519939_-	LexA family transcriptional regulator	F1C599	Cronobacter_phage	2.2e-63	51.9
WP_002215470.1\|1520212_1520692_+	antitermination protein Q	S5M7R9	Escherichia_phage	2.3e-37	61.0
WP_012304340.1\|1520902_1522207_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.6e-91	46.2
WP_002208861.1\|1522937_1523750_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_002208860.1\|1523725_1524520_+	hydroxypyruvate isomerase family protein	NA	NA	NA	NA
WP_011192001.1\|1525115_1525406_+	hypothetical protein	H6WRZ3	Salmonella_phage	7.7e-12	46.3
WP_002208858.1\|1525451_1526069_+	ATP-binding protein	NA	NA	NA	NA
WP_002208857.1\|1526073_1526268_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.5e-08	60.4
WP_002208856.1\|1526264_1527773_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	2.4e-104	44.2
WP_011192002.1\|1527794_1528163_+\|tail	phage tail tube protein	NA	NA	NA	NA
WP_002208854.1\|1528164_1528464_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_002208853.1\|1528584_1530078_+\|coat	coat protein	NA	NA	NA	NA
WP_011192003.1\|1530344_1531751_+	DNA circularization protein	U5P4I0	Shigella_phage	3.5e-17	36.1
WP_011192004.1\|1531747_1532803_+\|tail	tail protein	A0A2I7S9G1	Vibrio_phage	1.3e-37	27.5
WP_002215460.1\|1532818_1533415_+\|plate	phage baseplate assembly protein	NA	NA	NA	NA
WP_002208848.1\|1533411_1533867_+	phage GP46 family protein	A0A0C4UR04	Shigella_phage	4.3e-17	43.8
WP_011192005.1\|1533870_1535007_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	3.5e-31	30.5
WP_011192006.1\|1535003_1535606_+	YmfQ family protein	A0A2P9JZK7	Alteromonadaceae_phage	2.0e-33	38.6
WP_011192007.1\|1535702_1536419_+	hypothetical protein	NA	NA	NA	NA
WP_011192008.1\|1536420_1536840_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	8.3e-07	32.3

DBSCAN-SWA_4

2097206 : 2237008

166

Erwinia_phage(25.44%)

transposase,plate,head,tail,terminase,lysis,holin,integrase,capsid,portal

attL 2089762:2089775|attR 2245654:2245670

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2089762:2089775	attL	NA	NA	NA	NA
WP_011192198.1\|2097206_2097422_-	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	9.7e-20	62.5
2089762:2089775	attL	NA	NA	NA	NA
WP_011192199.1\|2097513_2098680_-	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	7.4e-146	66.5
WP_011192200.1\|2098676_2099162_-\|tail	phage tail protein	S4TUC3	Salmonella_phage	1.5e-47	60.4
WP_011192201.1\|2099161_2101588_-\|tail	phage tail tape measure protein	U5N0T4	Enterobacteria_phage	8.4e-160	44.5
WP_011192202.1\|2101580_2101703_-\|tail	GpE family phage tail protein	Q858U8	Yersinia_virus	7.4e-09	68.4
WP_011192203.1\|2101735_2102047_-\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	2.9e-25	60.9
WP_011192204.1\|2102097_2102613_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	2.3e-67	73.1
WP_011192205.1\|2102626_2103796_-\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	2.1e-185	80.2
WP_011192206.1\|2103923_2104406_-\|tail	tail fiber assembly protein	F1BUP0	Erwinia_phage	1.5e-28	41.3
WP_011192207.1\|2104417_2105857_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	1.2e-76	79.4
WP_011192208.1\|2105853_2106462_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	3.9e-90	78.6
WP_011192209.1\|2106454_2107363_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.9e-125	79.5
WP_011192210.1\|2107367_2107718_-	GPW/gp25 family protein	F1BUP4	Erwinia_phage	2.4e-39	69.0
WP_011192211.1\|2107714_2108356_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	2.4e-69	61.0
WP_011192212.1\|2108429_2108879_-	phage virion morphogenesis protein	O80313	Escherichia_phage	5.7e-46	63.8
WP_011192213.1\|2108875_2109331_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	4.0e-47	63.3
WP_071880004.1\|2109269_2109467_-\|holin	holin	F1BUQ0	Erwinia_phage	4.0e-12	59.3
WP_011192214.1\|2109426_2109843_-\|lysis	LysB family phage lysis regulatory protein	F1BUQ1	Erwinia_phage	8.7e-25	49.6
WP_011192215.1\|2109844_2110351_-	lysozyme	A0A218M4K3	Erwinia_phage	2.0e-55	62.3
WP_038830077.1\|2110334_2110544_-	hypothetical protein	A0A218M4L5	Erwinia_phage	1.7e-08	44.9
WP_011192217.1\|2110546_2110750_-\|tail	tail protein X	E5G6M9	Salmonella_phage	3.5e-19	64.2
WP_011192218.1\|2110749_2111223_-\|head	head completion/stabilization protein	M1SNN6	Escherichia_phage	1.7e-40	56.8
WP_011192219.1\|2111322_2111982_-\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	7.2e-82	69.9
WP_011192220.1\|2111985_2113224_-\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	7.1e-147	74.6
WP_011192221.1\|2113300_2114155_-\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	6.5e-91	61.1
WP_011192222.1\|2114303_2116076_+\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	2.9e-287	81.0
WP_011192223.1\|2116072_2116837_+\|terminase	terminase	O80303	Escherichia_phage	2.1e-56	46.6
WP_011192224.1\|2116833_2117871_+\|portal	phage portal protein	F1BUR7	Erwinia_phage	1.8e-159	78.4
WP_033852502.1\|2118291_2118486_-	hypothetical protein	NA	NA	NA	NA
WP_011192225.1\|2118622_2118982_-	hypothetical protein	H9C172	Pectobacterium_phage	6.2e-19	41.1
WP_011192226.1\|2119004_2121287_-	replication endonuclease	Q858T4	Yersinia_virus	2.2e-242	57.0
WP_011192227.1\|2121273_2121546_-	DUF2732 family protein	NA	NA	NA	NA
WP_011192228.1\|2121611_2121923_-	hypothetical protein	NA	NA	NA	NA
WP_041175449.1\|2121934_2122120_-	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_011192229.1\|2122129_2122639_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	2.7e-44	52.4
WP_011192230.1\|2122693_2122891_-	hypothetical protein	Q1I116	Pasteurella_virus	4.7e-05	39.3
WP_011192231.1\|2122961_2123573_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	3.4e-25	37.9
WP_011192232.1\|2123600_2124872_+	AAA family ATPase	NA	NA	NA	NA
WP_011192233.1\|2124871_2125750_+	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_011192234.1\|2125869_2126925_+\|integrase	tyrosine-type recombinase/integrase	Q1I119	Pasteurella_virus	3.2e-116	62.1
WP_011192235.1\|2126921_2127968_+	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_011192236.1\|2128302_2129325_-\|integrase	tyrosine-type recombinase/integrase	K7PLZ2	Enterobacterial_phage	1.1e-137	70.2
WP_011192237.1\|2129644_2130148_-	hypothetical protein	NA	NA	NA	NA
2129419:2129432	attR	NA	NA	NA	NA
WP_011192239.1\|2130711_2131575_-	hypothetical protein	A0A192Y7N1	Salmonella_phage	5.9e-23	38.9
2129419:2129432	attR	NA	NA	NA	NA
WP_011192240.1\|2131933_2132170_-	hypothetical protein	A0A248SL48	Klebsiella_phage	8.5e-17	64.6
WP_106470333.1\|2132406_2132832_-	hypothetical protein	NA	NA	NA	NA
WP_011192242.1\|2132831_2133971_-	hypothetical protein	M4MHC3	Vibrio_phage	9.1e-32	26.4
WP_011192243.1\|2134015_2135620_-	YqaJ viral recombinase family protein	A0A2H4J6P1	uncultured_Caudovirales_phage	3.2e-107	51.3
WP_011192244.1\|2135606_2136449_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.4
WP_042593118.1\|2136749_2137076_-	hypothetical protein	NA	NA	NA	NA
WP_041175452.1\|2137091_2137559_-	hypothetical protein	G0YQE7	Erwinia_phage	2.9e-45	60.8
WP_144405789.1\|2137926_2138112_-	hypothetical protein	NA	NA	NA	NA
WP_032466292.1\|2138185_2138401_-	hypothetical protein	NA	NA	NA	NA
WP_011192247.1\|2138462_2138732_-	KTSC domain-containing protein	A9YWW2	Burkholderia_phage	1.9e-12	43.4
WP_011192248.1\|2138816_2139062_-	hypothetical protein	NA	NA	NA	NA
WP_011192249.1\|2139339_2139957_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_011192250.1\|2139967_2140654_-	LexA family transcriptional regulator	Q8W648	Enterobacteria_phage	8.1e-60	52.0
WP_025383629.1\|2140778_2141024_+	hypothetical protein	Q8W647	Enterobacteria_phage	1.1e-16	64.4
WP_011192252.1\|2141041_2141404_+	hypothetical protein	NA	NA	NA	NA
WP_032466294.1\|2141400_2141580_+	hypothetical protein	NA	NA	NA	NA
WP_011192253.1\|2141588_2142434_+	hypothetical protein	H2DE83	Erwinia_phage	1.0e-43	47.0
WP_011192254.1\|2142437_2143214_+	hypothetical protein	H2DE84	Erwinia_phage	7.3e-49	51.5
WP_011192255.1\|2143217_2144354_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	4.9e-94	60.3
WP_011192256.1\|2144353_2144701_+	hypothetical protein	A0A1I9KG94	Aeromonas_phage	3.8e-05	43.4
WP_011192257.1\|2144697_2145624_+	site-specific DNA-methyltransferase	A0A059VK11	Pseudomonas_phage	1.7e-108	52.8
WP_011192258.1\|2145620_2146496_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	2.4e-85	52.2
WP_011192259.1\|2146492_2148238_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	7.2e-238	61.5
WP_011192260.1\|2148234_2148882_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.3e-14	31.2
WP_032466299.1\|2148883_2149204_+	DUF1364 domain-containing protein	A0A2K8HR56	Pseudomonas_phage	1.3e-15	44.9
WP_011192261.1\|2149275_2150211_+	hypothetical protein	NA	NA	NA	NA
WP_011192262.1\|2150207_2150666_+	VRR-NUC domain-containing protein	M4SRS1	Psychrobacter_phage	2.3e-10	33.0
WP_050128217.1\|2150666_2150885_+	hypothetical protein	K7PJU3	Enterobacteria_phage	3.4e-12	50.8
WP_011192263.1\|2150977_2151787_+	hypothetical protein	NA	NA	NA	NA
WP_011192264.1\|2151959_2152172_+\|holin	class II holin family protein	H9C183	Pectobacterium_phage	1.1e-23	72.9
WP_025383638.1\|2152177_2152660_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	1.2e-49	57.6
WP_011192266.1\|2152791_2153310_+	hypothetical protein	H9C185	Pectobacterium_phage	5.2e-19	42.8
WP_025383640.1\|2153313_2153502_+	hypothetical protein	A0A2I7RNR1	Vibrio_phage	7.9e-18	79.3
WP_011192267.1\|2153527_2153968_+	DUF2829 domain-containing protein	A0A2I7R7I1	Vibrio_phage	1.7e-26	62.5
WP_000255944.1\|2154074_2155097_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_001297096.1\|2155096_2155876_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	4.5e-139	99.6
WP_011192268.1\|2155993_2156851_+	hypothetical protein	A0A1I9KFG9	Aeromonas_phage	6.0e-44	39.1
WP_025383644.1\|2156889_2158554_+\|terminase	terminase	B0FEF1	Escherichia_phage	9.3e-235	70.5
WP_011192270.1\|2158553_2160674_+	hypothetical protein	A0A088CE71	Shigella_phage	1.2e-258	65.6
WP_011192271.1\|2160943_2161993_+	hypothetical protein	A0A0H4J3F0	Shigella_phage	2.0e-57	40.4
WP_011192272.1\|2162052_2163276_+\|capsid	N4-gp56 family major capsid protein	A0A088CC32	Shigella_phage	2.2e-172	73.6
WP_011192273.1\|2163353_2163737_+	hypothetical protein	NA	NA	NA	NA
WP_011192274.1\|2163802_2164255_+	hypothetical protein	A0A2R2Z354	Escherichia_phage	1.8e-31	52.8
WP_011192275.1\|2164257_2164854_+	hypothetical protein	A0A088CE76	Shigella_phage	7.6e-30	38.9
WP_011192276.1\|2164853_2165507_+	hypothetical protein	Q08J85	Stx2-converting_phage	1.2e-68	59.5
WP_011192277.1\|2165503_2167639_+\|tail	prophage tail fiber N-terminal domain-containing protein	I7K3G3	Yersinia_phage	4.5e-48	42.0
WP_106470341.1\|2167700_2168114_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.4e-06	38.0
WP_011192279.1\|2168126_2168453_-	DUF1493 family protein	NA	NA	NA	NA
WP_011192280.1\|2168446_2168911_-	hypothetical protein	NA	NA	NA	NA
WP_011192281.1\|2169142_2170771_+	hypothetical protein	A0A2R2Z356	Escherichia_phage	3.0e-177	56.4
WP_011192282.1\|2170767_2171874_+	DUF1983 domain-containing protein	A0A2L1IV54	Escherichia_phage	1.9e-106	49.3
WP_011192283.1\|2171940_2172972_+	hypothetical protein	NA	NA	NA	NA
WP_011192284.1\|2172946_2173321_+	hypothetical protein	A0A2L1IV61	Escherichia_phage	9.6e-31	54.7
WP_011192285.1\|2173328_2173934_+	hypothetical protein	A0A1I9KFE8	Aeromonas_phage	2.5e-49	54.9
WP_011192286.1\|2173949_2174333_+	hypothetical protein	A0A1I9KFD7	Aeromonas_phage	5.8e-31	57.6
WP_011192287.1\|2174332_2174572_+	hypothetical protein	NA	NA	NA	NA
WP_011192288.1\|2174582_2175974_+	hypothetical protein	A0A0P0ZD72	Stx2-converting_phage	5.3e-26	28.9
WP_011192289.1\|2176307_2182709_+	hypothetical protein	Q08J70	Stx2-converting_phage	1.3e-281	33.9
WP_049800086.1\|2182671_2184330_+	hypothetical protein	A0A1I9KFG8	Aeromonas_phage	6.3e-167	54.0
WP_032466310.1\|2184357_2184579_-	hypothetical protein	NA	NA	NA	NA
WP_011192291.1\|2184580_2184985_-	hypothetical protein	NA	NA	NA	NA
WP_011192292.1\|2185863_2186037_-	ogr/Delta-like zinc finger family protein	S4TNZ3	Salmonella_phage	1.3e-14	64.3
WP_011192293.1\|2186111_2187206_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.9e-127	65.7
WP_011192294.1\|2187202_2187667_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	9.4e-44	56.2
WP_011192295.1\|2187678_2190594_-\|tail	phage tail tape measure protein	Q9ZXK0	Pseudomonas_virus	2.8e-154	52.6
WP_071819140.1\|2190586_2190706_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_011192297.1\|2190720_2191068_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.6e-18	51.6
WP_011192298.1\|2191121_2191637_-\|tail	phage major tail tube protein	A0A218M4J0	Erwinia_phage	2.5e-61	66.3
WP_011192299.1\|2191648_2192824_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-179	79.8
WP_011192300.1\|2192957_2193437_-\|tail	tail fiber assembly protein	F1BUP0	Erwinia_phage	1.2e-28	41.9
WP_011192301.1\|2193448_2194888_-\|tail	phage tail protein	F1BUP1	Erwinia_phage	3.8e-75	77.8
WP_011192302.1\|2194884_2195493_-\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.7e-85	75.0
WP_011192303.1\|2195485_2196394_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	1.3e-118	73.2
WP_011192304.1\|2196396_2196750_-	GPW/gp25 family protein	A0A218M4K8	Erwinia_phage	2.4e-31	59.3
WP_011192305.1\|2196746_2197382_-\|plate	phage baseplate assembly protein V	O80314	Escherichia_phage	1.3e-64	62.0
WP_012304193.1\|2197712_2198414_-	hypothetical protein	NA	NA	NA	NA
WP_011192307.1\|2198745_2199192_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	7.7e-35	50.7
WP_011192308.1\|2199188_2199656_-\|tail	phage tail protein	F1BUP9	Erwinia_phage	1.8e-42	57.2
WP_024063356.1\|2199642_2199795_-	hypothetical protein	NA	NA	NA	NA
WP_011192309.1\|2199754_2200180_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	9.2e-22	48.2
WP_011192310.1\|2200184_2200580_-	M15 family metallopeptidase	A9DET4	Yersinia_phage	3.5e-47	71.8
WP_011192311.1\|2200566_2200953_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_011192312.1\|2200982_2201186_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.8e-23	70.1
WP_011192313.1\|2201185_2201677_-\|head	head completion/stabilization protein	A0A1S5NNA6	Burkholderia_phage	7.9e-33	48.4
WP_011192314.1\|2201910_2202564_-	hypothetical protein	F1BUQ7	Erwinia_phage	1.7e-43	46.8
WP_011192315.1\|2202570_2203626_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.1e-123	62.8
WP_011192316.1\|2203662_2204478_-\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	9.6e-76	71.1
WP_011192317.1\|2204648_2206412_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	3.1e-228	63.6
WP_041175454.1\|2206411_2207452_+\|portal	phage portal protein	A0A077K9Q8	Ralstonia_phage	7.8e-131	64.3
WP_011192319.1\|2208133_2208478_-	hypothetical protein	NA	NA	NA	NA
WP_012413686.1\|2208474_2208705_-	hypothetical protein	NA	NA	NA	NA
WP_011192320.1\|2208685_2211241_-	replication endonuclease	E5G6L9	Salmonella_phage	8.9e-128	37.9
WP_011192321.1\|2211329_2212148_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S6L011	Salmonella_phage	1.5e-76	55.9
WP_011192322.1\|2212144_2212798_-	3'-5' exonuclease	A0A1D9C9N8	Salinivibrio_phage	3.0e-56	62.9
WP_011192323.1\|2212854_2213622_-	hypothetical protein	K7ZRM8	Xanthomonas_citri_phage	1.9e-09	49.3
WP_012304177.1\|2213704_2214010_-	hypothetical protein	NA	NA	NA	NA
WP_011192325.1\|2214040_2214301_-	hypothetical protein	NA	NA	NA	NA
WP_012304175.1\|2214311_2214458_-	hypothetical protein	NA	NA	NA	NA
WP_011192326.1\|2214442_2214757_-	hypothetical protein	NA	NA	NA	NA
WP_024063347.1\|2214753_2214960_-	hypothetical protein	NA	NA	NA	NA
WP_011192327.1\|2214971_2215175_-	hypothetical protein	NA	NA	NA	NA
WP_012304171.1\|2215187_2215379_-	hypothetical protein	NA	NA	NA	NA
WP_011192328.1\|2215439_2215808_+	helix-turn-helix transcriptional regulator	A0A2H4JFL3	uncultured_Caudovirales_phage	5.2e-13	39.8
WP_011192329.1\|2215828_2217526_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	9.0e-76	62.5
WP_011192331.1\|2218034_2218415_+	hypothetical protein	NA	NA	NA	NA
WP_012413690.1\|2219728_2219953_-\|integrase	integrase	K7PLZ2	Enterobacterial_phage	6.6e-19	76.8
WP_002215401.1\|2220511_2220739_+	replicative DNA helicase	A0A192Y673	Salmonella_phage	2.1e-12	57.7
WP_012413693.1\|2221498_2221672_+	hypothetical protein	NA	NA	NA	NA
WP_002213223.1\|2221863_2222046_+	hypothetical protein	NA	NA	NA	NA
WP_011192334.1\|2222075_2222318_-	hypothetical protein	NA	NA	NA	NA
WP_011192335.1\|2222343_2222688_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_086025313.1\|2222907_2224421_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_012413696.1\|2225377_2226646_+	MFS transporter	NA	NA	NA	NA
WP_011192338.1\|2226642_2228376_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_011192339.1\|2228365_2229091_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_011192340.1\|2229078_2229933_+	YqcI/YcgG family protein	NA	NA	NA	NA
WP_012413697.1\|2229932_2230730_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_011192342.1\|2230726_2231893_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_011192343.1\|2231867_2232425_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002215413.1\|2236153_2236441_-	hypothetical protein	NA	NA	NA	NA
WP_002213212.1\|2236457_2236757_-	GPW/gp25 family protein	A0A218M4K8	Erwinia_phage	2.6e-23	64.9
WP_032467055.1\|2236753_2237008_-\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	3.1e-17	61.1
2245654:2245670	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3683237 : 3765910

Cronobacter_phage(44.74%)

transposase,plate,head,tail,tRNA,terminase,holin,integrase,capsid,portal

attL 3694307:3694322|attR 3747632:3747647

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011192918.1\|3683237_3685529_+	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	1.9e-153	40.6
WP_002209924.1\|3685928_3686327_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA
WP_024063131.1\|3686326_3686623_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA
WP_011192920.1\|3686786_3687149_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002214785.1\|3687211_3687472_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	7.4e-06	36.0
WP_002209928.1\|3688069_3688255_+	hypothetical protein	NA	NA	NA	NA
WP_011192921.1\|3688396_3689380_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	3.4e-112	59.9
WP_012413890.1\|3689446_3689746_-	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	6.7e-27	59.6
WP_011192923.1\|3689859_3690132_+	hypothetical protein	Q1JS60	Enterobacteria_phage	8.8e-34	68.9
WP_012413891.1\|3690128_3690341_+	hypothetical protein	NA	NA	NA	NA
WP_041175468.1\|3690800_3691034_-	hypothetical protein	NA	NA	NA	NA
WP_011192925.1\|3691180_3691450_+	hypothetical protein	NA	NA	NA	NA
WP_041175469.1\|3691446_3691668_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_011192926.1\|3691679_3692030_+	DUF5347 family protein	NA	NA	NA	NA
WP_041175470.1\|3692100_3692337_+	hypothetical protein	NA	NA	NA	NA
WP_011192927.1\|3692336_3693002_+	DUF3850 domain-containing protein	A0A1S6KVH3	Escherichia_phage	6.1e-12	51.4
WP_011192928.1\|3693011_3693713_+	3'-5' exonuclease	A2I2Z6	Vibrio_virus	8.6e-49	52.7
3694307:3694322	attL	NA	NA	NA	NA
WP_086025326.1\|3696876_3697143_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	4.4e-22	55.2
WP_011192931.1\|3697199_3698267_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	3.2e-127	61.9
WP_011192932.1\|3698263_3700069_-	hypothetical protein	F1BUM5	Cronobacter_phage	8.6e-194	56.3
WP_011192933.1\|3700241_3701330_+\|capsid	GPO family capsid scaffolding protein	A0A2I7RNH1	Vibrio_phage	6.7e-32	40.6
WP_011192934.1\|3701364_3702393_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	2.4e-100	57.0
WP_011192935.1\|3702395_3703100_+\|terminase	terminase	F1BUM0	Cronobacter_phage	8.6e-73	58.8
WP_011192936.1\|3703208_3703682_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	6.2e-43	61.2
WP_011192937.1\|3703678_3704173_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.6e-31	40.5
WP_011192938.1\|3704169_3704829_+	hypothetical protein	F1BUL6	Cronobacter_phage	4.1e-53	49.8
WP_011192939.1\|3704852_3706019_+	DUF2586 family protein	F1BUL5	Cronobacter_phage	2.7e-100	51.0
WP_011192940.1\|3706021_3706477_+	DUF2597 family protein	A5X9I1	Aeromonas_virus	7.0e-44	58.3
WP_011192941.1\|3706486_3706789_+\|holin	holin	C7BGD7	Burkholderia_phage	2.2e-09	39.3
WP_011192942.1\|3706785_3707127_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	1.1e-41	77.2
WP_011192943.1\|3707126_3707501_+	hypothetical protein	F1BUL2	Cronobacter_phage	3.2e-10	40.2
WP_011192944.1\|3707615_3707891_+	hypothetical protein	NA	NA	NA	NA
WP_012413912.1\|3707935_3708115_+	hypothetical protein	NA	NA	NA	NA
WP_011192945.1\|3708116_3710093_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.5e-130	41.0
WP_011192946.1\|3710089_3710419_+	DUF2590 family protein	Q94MY3	Haemophilus_virus	4.6e-29	60.4
WP_011192947.1\|3710415_3711600_+\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	3.9e-134	59.3
WP_011192948.1\|3711592_3712216_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.2e-57	57.9
WP_011192949.1\|3712225_3713821_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.2e-55	40.5
WP_011192950.1\|3713820_3714339_+\|tail	tail assembly chaperone	A9DEL3	Yersinia_phage	4.1e-40	49.4
WP_011192951.1\|3714335_3715046_+	hypothetical protein	Q94MX8	Haemophilus_virus	4.2e-11	25.9
WP_011192952.1\|3715038_3715593_+	hypothetical protein	F1BUJ9	Cronobacter_phage	1.0e-36	51.1
WP_011192953.1\|3715589_3717311_+	hypothetical protein	F1BUJ7	Cronobacter_phage	5.3e-124	48.7
WP_011192954.1\|3718037_3719252_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.7e-132	58.8
WP_002209930.1\|3719684_3721202_-\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.1e-85	37.0
WP_002228062.1\|3721211_3722310_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	5.4e-05	39.0
WP_002209931.1\|3722488_3724222_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.6e-64	29.7
WP_002209932.1\|3724228_3724945_-	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA
WP_002209933.1\|3724975_3725875_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	8.5e-33	29.7
WP_011192956.1\|3725981_3726500_+	flavodoxin FldB	NA	NA	NA	NA
WP_032466588.1\|3726584_3728042_-	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_002209936.1\|3728162_3729581_-	two-component system sensor histidine kinase CreC	NA	NA	NA	NA
WP_002209937.1\|3729591_3730290_-	two-component system response regulator CreB	NA	NA	NA	NA
WP_002215144.1\|3730289_3730715_-	protein YgfX	NA	NA	NA	NA
WP_002209939.1\|3730695_3730962_-	FAD assembly factor SdhE	NA	NA	NA	NA
WP_011192958.1\|3731278_3732271_+\|tRNA	tRNA-modifying protein YgfZ	NA	NA	NA	NA
WP_002209941.1\|3732343_3732841_-	DUF2165 family protein	NA	NA	NA	NA
WP_011192959.1\|3733098_3733800_-	hemolysin III family protein	NA	NA	NA	NA
WP_011192960.1\|3734000_3735104_-	hypothetical protein	NA	NA	NA	NA
WP_148305774.1\|3735207_3737358_-	autotransporter adhesin YapN	NA	NA	NA	NA
WP_011192961.1\|3738417_3738855_-	lipocalin-like domain-containing protein	NA	NA	NA	NA
WP_002209947.1\|3739232_3742112_-	aminomethyl-transferring glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.7e-268	52.3
WP_002209948.1\|3742323_3742710_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_011192962.1\|3742778_3743876_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_002209950.1\|3744596_3745817_-	FAD-dependent 2-octaprenylphenol hydroxylase	NA	NA	NA	NA
WP_011192963.1\|3745989_3747168_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA
WP_011192964.1\|3747219_3748533_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA
3747632:3747647	attR	NA	NA	NA	NA
WP_002209953.1\|3748620_3749199_-	YecA family protein	NA	NA	NA	NA
WP_002209954.1\|3749535_3749865_+	cell division protein ZapA	NA	NA	NA	NA
WP_011192965.1\|3750228_3750825_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_002209956.1\|3751089_3752331_-	phosphoglycerate dehydrogenase	A0A1V0SBV6	Catovirus	2.1e-98	46.5
WP_002209957.1\|3752637_3753294_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_002209958.1\|3753635_3754544_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA
WP_011192966.1\|3754554_3755334_-	oxidative stress defense protein	NA	NA	NA	NA
WP_002209960.1\|3755523_3756141_-	arginine exporter ArgO	NA	NA	NA	NA
WP_002209961.1\|3756403_3757273_-	small-conductance mechanosensitive channel MscS	NA	NA	NA	NA
WP_157868820.1\|3757710_3758775_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_002209963.1\|3758910_3760074_-	phosphoglycerate kinase	NA	NA	NA	NA
WP_002209964.1\|3760176_3761193_-	erythrose-4-phosphate dehydrogenase	NA	NA	NA	NA
WP_011192968.1\|3761571_3763566_-	transketolase	NA	NA	NA	NA
WP_011192969.1\|3764056_3764809_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_002209968.1\|3764920_3765241_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_002213775.1\|3765451_3765910_-\|transposase	IS200/IS605-like element IS1541B family transposase	I4AZI8	Saccharomonospora_phage	8.5e-13	31.5

DBSCAN-SWA_6

4175670 : 4234635

uncultured_Mediterranean_phage(18.18%)

protease,tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002216203.1\|4175670_4176186_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	3.6e-28	55.6
WP_002210135.1\|4176191_4176833_-	stringent starvation protein A	NA	NA	NA	NA
WP_002230558.1\|4177012_4177210_+	hypothetical protein	NA	NA	NA	NA
WP_002210133.1\|4177206_4177599_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_002210132.1\|4177613_4178042_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_002210131.1\|4178355_4179483_-	cell division protein ZapE	NA	NA	NA	NA
WP_002210130.1\|4179706_4180111_+	DUF1043 family protein	NA	NA	NA	NA
WP_002218066.1\|4180381_4181755_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	7.4e-20	28.2
WP_002210128.1\|4181844_4182933_+	outer membrane-stress sensor serine endopeptidase DegS	A0A1B1IRD3	uncultured_Mediterranean_phage	2.1e-09	31.8
WP_002210127.1\|4183113_4184376_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_012104414.1\|4184529_4184784_-	BolA family iron metabolism protein IbaG	NA	NA	NA	NA
WP_002210125.1\|4184930_4185233_-	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA
WP_002210124.1\|4185268_4185892_-	phospholipid-binding protein MlaC	NA	NA	NA	NA
WP_011193146.1\|4185904_4186462_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
WP_002210122.1\|4186466_4187249_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA
WP_002210121.1\|4187466_4188285_-	phospholipid ABC transporter ATP-binding protein MlaF	G3M9Y6	Bacillus_virus	2.2e-19	31.7
WP_002210120.1\|4188549_4189524_+	calcium/sodium antiporter	NA	NA	NA	NA
WP_002210119.1\|4189634_4190621_+	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	6.0e-40	30.8
WP_002228203.1\|4191026_4191590_+	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	9.6e-59	83.0
WP_011193147.1\|4191586_4192150_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_002210117.1\|4192133_4192679_+	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
WP_002210116.1\|4192685_4193411_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-22	28.4
WP_002210115.1\|4193472_4194906_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_004392031.1\|4194929_4195217_+	ribosome hibernation promoting factor	NA	NA	NA	NA
WP_002213952.1\|4195335_4195818_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_002210113.1\|4196123_4196978_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	3.2e-05	30.0
WP_002210112.1\|4196974_4197247_+	PTS phosphocarrier protein NPr	NA	NA	NA	NA
WP_011193148.1\|4197584_4198520_+	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.0e-48	38.5
WP_012104412.1\|4198531_4198996_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_011193150.1\|4199133_4199520_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_002210107.1\|4199818_4200295_+	hypothetical protein	NA	NA	NA	NA
WP_002210106.1\|4200528_4201482_+	HTH-type transcriptional regulator TreR	NA	NA	NA	NA
WP_011193151.1\|4201892_4203308_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_002210104.1\|4203402_4205070_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_002210103.1\|4205422_4205833_+	nucleoside diphosphate kinase regulator	NA	NA	NA	NA
WP_002210102.1\|4206076_4206463_-	cytochrome b562	NA	NA	NA	NA
WP_011055205.1\|4206670_4207315_-	hypothetical protein	A0A1B0VBK8	Salmonella_phage	3.4e-52	49.0
WP_011193152.1\|4207438_4208779_-\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_011193153.1\|4208959_4209508_+	ribosome-associated protein	NA	NA	NA	NA
WP_002210098.1\|4209651_4209933_-	ribonuclease inhibitor	NA	NA	NA	NA
WP_002214288.1\|4209937_4210411_-	ribonuclease Ba	NA	NA	NA	NA
WP_011193154.1\|4210605_4212075_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_002210095.1\|4212341_4214297_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002210094.1\|4214298_4215234_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002210093.1\|4215241_4215445_-	AaeX family protein	NA	NA	NA	NA
WP_011193155.1\|4215747_4216659_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_011193156.1\|4216919_4217786_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011193157.1\|4218021_4220514_+	toxin	NA	NA	NA	NA
WP_011193158.1\|4220554_4224133_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_011193159.1\|4224189_4228659_+	toxin	NA	NA	NA	NA
WP_002214300.1\|4228798_4229101_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_011193160.1\|4229113_4229515_+	M15 family metallopeptidase	A0A249XWK9	Proteus_phage	2.8e-36	61.0
WP_012414059.1\|4229511_4229871_+	hypothetical protein	NA	NA	NA	NA
WP_011193162.1\|4230130_4232989_+	RHS repeat protein	NA	NA	NA	NA
WP_002210082.1\|4233189_4234635_-\|protease	metalloprotease TldD	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_006153

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NC_006155

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection