Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_013263 Erwinia pyrifoliae Ep1/96 plasmid pEP36, complete sequence 0 crisprs NA 0 0 4 0
NC_013954 Erwinia pyrifoliae Ep1/96 plasmid pEP2.6, complete sequence 0 crisprs NA 0 0 0 0
NC_013264 Erwinia pyrifoliae Ep1/96 plasmid pEP03, complete sequence 0 crisprs NA 0 0 0 0
NC_012214 Erwinia pyrifoliae Ep1/96, complete genome 8 crisprs DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3f,cas8f,cas5f,cas7f,cas6f,DinG 0 26 8 0
NC_013265 Erwinia pyrifoliae Ep1/96 plasmid pEP05, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NC_013263
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 5481 3 Enterobacteria_phage(66.67%) transposase NA
DBSCAN-SWA_2 8611 : 12597 3 Vibrio_phage(50.0%) holin NA
DBSCAN-SWA_3 16637 : 20425 5 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_4 26624 : 31761 5 uncultured_virus(25.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NC_012214
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_1 778089-778170 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_2 930383-931083 TypeI-E I-E
11 spacers
cas3,cas8e,cse2gr11,cas7,cas5,cas6e

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_3 941216-942161 TypeI-E,TypeI-F I-E
15 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,cas3f

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_5 952312-952399 TypeI-E,TypeI-F I-F
1 spacers
cas2,cas1,cas3f,cas8f,cas5f,cas7f,cas6f

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_4 951489-952117 TypeI-E,TypeI-F I-F
10 spacers
cas2,cas1,cas3f,cas8f,cas5f,cas7f,cas6f

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_6 961931-962258 TypeI-F I-F
5 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_7 2539000-2539102 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_012214_8 3764248-3764360 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP048112 Klebsiella michiganensis strain BD177 plasmid unnamed6 22926-22957 0 1.0
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP045219 Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence 28548-28579 0 1.0
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP026384 Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence 19377-19408 0 1.0
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP035200 Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence 10709-10740 0 1.0
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP045693 Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence 16554-16585 0 1.0
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 CP052480 Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence 16405-16436 0 1.0
NC_012214_3 3.3|941367|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941367-941398 32 NZ_CP017585 Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ04, complete sequence 18301-18332 0 1.0
NC_012214_3 3.3|941367|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941367-941398 32 NZ_CP017587 Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ06, complete sequence 13400-13431 0 1.0
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP026280 Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence 146178-146209 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NC_005814 Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence 15397-15428 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP048112 Klebsiella michiganensis strain BD177 plasmid unnamed6 9238-9269 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP041104 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed5, complete sequence 34107-34138 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP018922 Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence 3548-3579 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP022119 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence 13268-13299 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP022119 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence 19076-19107 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP026388 Leclercia sp. LSNIH3 plasmid pLEC-2975, complete sequence 30490-30521 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP026384 Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence 32831-32862 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP035200 Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence 24189-24220 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NC_010726 Klebsiella pneumoniae plasmid pMET-1, complete sequence 15369-15400 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP019191 Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence 27425-27456 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP045693 Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence 3100-3131 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 CP052480 Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence 2955-2986 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 MN823994 Leclercia adecarboxylata strain 150707804 plasmid p707804-2FII, complete sequence 9849-9880 1 0.969
NC_012214_3 3.8|941673|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941673-941704 32 FQ482085 Erwinia tasmaniensis phage phiEt88 complete genome 24940-24971 1 0.969
NC_012214_3 3.8|941673|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941673-941704 32 NC_015295 Erwinia phage phiEt88, complete genome 24940-24971 1 0.969
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 NZ_KU176944 Citrobacter freundii strain WCHCF65 plasmid pKPC2_CF65, complete sequence 11131-11162 1 0.969
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 NZ_CP030267 Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-KPC, complete sequence 22652-22683 1 0.969
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 NZ_CP028389 Klebsiella pneumoniae strain WCHKP13F2 plasmid pKPC2_095132, complete sequence 85503-85534 1 0.969
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 NZ_CP043008 Citrobacter portucalensis strain WCHCP085039 plasmid pKPC2_085039, complete sequence 3339-3370 1 0.969
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 FQ482085 Erwinia tasmaniensis phage phiEt88 complete genome 44677-44708 1 0.969
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 NC_015295 Erwinia phage phiEt88, complete genome 44677-44708 1 0.969
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP032236 Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence 11173-11204 1 0.969
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP013915 Serratia fonticola strain GS2 plasmid pSF002, complete sequence 69140-69171 1 0.969
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_LN681230 Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence 39618-39649 1 0.969
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP045219 Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence 15075-15106 2 0.938
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 CP032292 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed1, complete sequence 36007-36038 2 0.938
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP019446 Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence 9209-9240 3 0.906
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP040393 Kosakonia radicincitans strain DSM 107547 plasmid pKrDSM107547, complete sequence 76283-76314 3 0.906
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP022661 Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-1, complete sequence 32884-32915 4 0.875
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 CP053403 Salmonella enterica strain 2010K-2057 plasmid unnamed1, complete sequence 5375-5406 4 0.875
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP022492 Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence 44726-44757 4 0.875
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP019182 Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 plasmid pATCC10720, complete sequence 22333-22364 4 0.875
NC_012214_6 6.9|962195|36|NC_012214|CRISPRCasFinder 962195-962230 36 NZ_CP032236 Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence 11169-11204 5 0.861
NC_012214_6 6.9|962195|36|NC_012214|CRISPRCasFinder 962195-962230 36 NZ_CP013915 Serratia fonticola strain GS2 plasmid pSF002, complete sequence 69136-69171 5 0.861
NC_012214_6 6.9|962195|36|NC_012214|CRISPRCasFinder 962195-962230 36 NZ_LN681230 Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence 39618-39653 5 0.861
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP024882 Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence 15375-15406 5 0.844
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 CP053577 Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence 137908-137939 5 0.844
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP032180 Citrobacter freundii strain AR_0116 plasmid unnamed2, complete sequence 16574-16605 5 0.844
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP037863 Citrobacter sp. LY-1 plasmid unnamed2, complete sequence 84388-84419 5 0.844
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 MN693155 Marine virus AFVG_25M94, complete genome 27150-27181 6 0.812
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 MN694517 Marine virus AFVG_250M306, complete genome 47464-47495 6 0.812
NC_012214_4 4.7|951877|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951877-951908 32 FQ482085 Erwinia tasmaniensis phage phiEt88 complete genome 41069-41100 6 0.812
NC_012214_4 4.7|951877|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951877-951908 32 NC_015295 Erwinia phage phiEt88, complete genome 41069-41100 6 0.812
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050099 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence 16656-16687 6 0.812
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP053441 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence 16656-16687 6 0.812
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP018230 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence 387894-387925 6 0.812
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP016289 Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence 261046-261077 6 0.812
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP022566 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence 282576-282607 6 0.812
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP034939 Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence 31037-31068 6 0.812
NC_012214_2 2.9|930901|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930901-930932 32 NZ_CP054609 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence 226319-226350 7 0.781
NC_012214_2 2.9|930901|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930901-930932 32 AY048850 Natrinema virus SNJ1, complete genome 11267-11298 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP043858 Arcobacter cibarius strain H743 plasmid pACIB, complete sequence 28647-28678 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 MN582060 Podoviridae sp. ctg2L5, complete genome 21461-21492 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NC_017421 Borreliella burgdorferi N40 plasmid N40_lp38, complete sequence 15870-15901 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NC_001856 Borreliella burgdorferi B31 plasmid lp38, complete sequence 15578-15609 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP019853 Borreliella burgdorferi plasmid lp38, complete sequence 15591-15622 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP019764 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence 15584-15615 7 0.781
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP017217 Borreliella burgdorferi strain B331 plasmid B331_lp38, complete sequence 15666-15697 7 0.781
NC_012214_3 3.13|941978|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941978-942009 32 NC_007974 Cupriavidus metallidurans CH34 megaplasmid, complete sequence 2010483-2010514 7 0.781
NC_012214_3 3.13|941978|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941978-942009 32 NZ_CP046333 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3 1616821-1616852 7 0.781
NC_012214_3 3.14|942039|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 942039-942070 32 MN855819 Bacteriophage sp. isolate 156, complete genome 11249-11280 7 0.781
NC_012214_4 4.8|951937|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951937-951968 32 KX397365 Erwinia phage vB_EamM_Caitlin, complete genome 31347-31378 7 0.781
NC_012214_5 5.1|952340|32|NC_012214|CRISPRCasFinder 952340-952371 32 NZ_CP044357 Acinetobacter baumannii strain CAM180-1 plasmid pCAM180A, complete sequence 22780-22811 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050093 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence 16812-16843 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050082 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence 17805-17836 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_008384 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence 16818-16849 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP049732 Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence 16759-16790 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP013634 Rhizobium sp. N324 plasmid pRspN324d, complete sequence 13141-13172 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_012858 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence 574962-574993 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_011366 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence 430467-430498 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP054023 Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence 283203-283234 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP054033 Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence 442890-442921 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP053208 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence 16757-16788 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_016907 Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence 113459-113490 7 0.781
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 952547-952578 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP025983 Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence 69939-69970 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP017586 Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ05, complete sequence 17724-17755 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NC_023025 Cronobacter malonaticus plasmid p2, complete sequence 52970-53001 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP011050 Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_3p, complete sequence 9164-9195 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NC_013285 Cronobacter turicensis z3032 plasmid pCTU3, complete sequence 10285-10316 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP039454 Enterobacter bugandensis strain 220 plasmid pSurvcare220, complete sequence 145914-145945 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP017590 Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence 48138-48169 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP019840 Enterobacter roggenkampii strain R11 plasmid pASM1, complete sequence 52804-52835 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP022149 Enterobacter roggenkampii strain 704SK10 plasmid p704SK10_1, complete sequence 110922-110953 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP009855 UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence 77877-77908 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP008907 Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence 35243-35274 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP033798 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed2, complete sequence 43943-43974 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP026851 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0072 plasmid unnamed1 104457-104488 7 0.781
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP029719 UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed1, complete sequence 43380-43411 7 0.781
NC_012214_2 2.1|930412|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 930412-930443 32 NC_048768 Gordonia phage Chelms, complete genome 1429-1460 8 0.75
NC_012214_2 2.1|930412|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 930412-930443 32 MT986029 Gordonia phage Linetti, complete genome 1427-1458 8 0.75
NC_012214_4 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951637-951668 32 NZ_CP040754 Sulfitobacter sp. BSw21498 plasmid unnamed, complete sequence 84931-84962 8 0.75
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 LT615366 Enterococcus phage VPE25 genome assembly, chromosome: VPE25 58462-58493 8 0.75
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 LT546029 Enterococcus phage VFW genome assembly, chromosome: VFW 57731-57762 8 0.75
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 LT546030 Enterococcus phage VPE25 genome assembly, chromosome: I 58462-58493 8 0.75
NC_012214_4 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951697-951728 32 MT119361 Enterococus phage vipetofem, complete genome 27499-27530 8 0.75
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 NZ_CP029832 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence 568638-568669 8 0.75
NC_012214_5 5.1|952340|32|NC_012214|CRISPRCasFinder 952340-952371 32 MN855600 Bacteriophage sp. isolate 296, complete genome 5661-5692 8 0.75
NC_012214_5 5.1|952340|32|NC_012214|CRISPRCasFinder 952340-952371 32 NZ_CP014237 Moraxella osloensis strain CCUG 350 plasmid unnamed2, complete sequence 28721-28752 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050105 Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence 16788-16819 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP025508 Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence 16688-16719 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050110 Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence 16788-16819 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP030764 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence 553349-553380 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP022667 Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence 23595-23626 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP050087 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence 16687-16718 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_021289 Burkholderia insecticola plasmid p1, complete sequence 1231205-1231236 8 0.75
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP054029 Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence 360142-360173 8 0.75
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NC_015163 Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence 5291-5322 8 0.75
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NC_015162 Deinococcus proteolyticus MRP plasmid pDEIPR02, complete sequence 156203-156234 8 0.75
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NC_016515 Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence 1370-1401 8 0.75
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP033799 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed3, complete sequence 6468-6499 8 0.75
NC_012214_6 6.10|962199|32|NC_012214|CRT 962199-962230 32 NZ_CP022534 Enterobacter hormaechei strain MS7884A plasmid pMS7884B, complete sequence 63987-64018 8 0.75
NC_012214_2 2.2|930473|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 930473-930504 32 MT774378 CrAssphage cr106_1, complete genome 54055-54086 9 0.719
NC_012214_2 2.7|930779|32|NC_012214|CRISPRCasFinder,CRT 930779-930810 32 NZ_CP045959 Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence 62168-62199 9 0.719
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP044456 Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence 202517-202548 9 0.719
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP039144 Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence 25981-26012 9 0.719
NC_012214_3 3.4|941428|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941428-941459 32 NZ_CP045341 Vibrio sp. THAF190c plasmid pTHAF190c_c, complete sequence 12640-12671 9 0.719
NC_012214_3 3.10|941795|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941795-941826 32 NC_011143 Phenylobacterium zucineum HLK1 plasmid, complete sequence 338920-338951 9 0.719
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 NC_005241 Cupriavidus necator H16 megaplasmid pHG1, complete sequence 301683-301714 9 0.719
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 NZ_CP039289 Cupriavidus necator H16 plasmid pHG1, complete sequence 301682-301713 9 0.719
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NZ_CP007129 Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence 890358-890389 9 0.719
NC_012214_6 6.2|962019|32|NC_012214|PILER-CR,CRT 962019-962050 32 NZ_CP022416 Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence 403647-403678 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 MH727545 Mycobacterium phage DismalStressor, complete genome 33728-33759 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NC_026598 Mycobacterium phage Milly, complete genome 33701-33732 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 MH834601 Mycobacterium phage BoostSeason, complete genome 33635-33666 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 KX688047 Mycobacterium phage Marcoliusprime, complete genome 33728-33759 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NC_028759 Mycobacterium phage Mufasa, complete genome 33626-33657 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 MF140408 Mycobacterium phage DismalFunk, complete genome 33728-33759 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 MF140411 Mycobacterium phage Findley, complete genome 33721-33752 9 0.719
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NZ_CP031159 Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence 31578-31609 9 0.719
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP018230 Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence 387890-387925 9 0.75
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP016289 Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence 261042-261077 9 0.75
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP022566 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence 282572-282607 9 0.75
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP050099 Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence 16656-16691 9 0.75
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP053441 Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence 16656-16691 9 0.75
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP021931 Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence 70071-70102 10 0.688
NC_012214_2 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR 930962-930993 32 NZ_CP050806 Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence 51436-51467 10 0.688
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP024444 Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence 71485-71516 10 0.688
NC_012214_3 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 941306-941337 32 NZ_CP040258 Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence 90406-90437 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 CP051632 Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence 21170-21201 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP028113 Escherichia coli O103 str. RM8385 plasmid pRM8385-1, complete sequence 48762-48793 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP031911 Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence 53580-53611 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP031923 Escherichia coli O26:H11 strain FWSEC0001 plasmid unnamed6, complete sequence 45777-45808 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027220 Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence 79730-79761 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027578 Escherichia coli strain 2013C-4225 plasmid unnamed 57246-57277 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027350 Escherichia coli strain 2014C-3655 plasmid unnamed 52209-52240 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP037944 Escherichia coli strain CFSAN027343 plasmid pCFSAN027343, complete sequence 85428-85459 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027547 Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence 50297-50328 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027391 Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence 36970-37001 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NC_012487 Escherichia coli plasmid pO26-Vir, complete sequence 38989-39020 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027444 Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence 32270-32301 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027473 Escherichia coli strain 2014C-3050 plasmid unnamed 26768-26799 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NC_013728 Escherichia coli O26:H- plasmid pO26-CRL, complete sequence 36976-37007 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027601 Escherichia coli strain 97-3250 plasmid unnamed2 76680-76711 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027436 Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence 45979-46010 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP006028 Escherichia coli O145:H28 str. RM13514 plasmid pO145-13514, complete sequence 54549-54580 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 AP019709 Escherichia coli O145:H28 122715 plasmid pO145_122715_1 DNA, complete genome 31674-31705 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027456 Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence 64075-64106 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_AP018810 Escherichia coli strain E2865 plasmid pE2865-2, complete sequence 31449-31480 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP037946 Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence 80760-80791 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 AP019707 Escherichia coli O145:H28 112648 plasmid pO145_112648_1 DNA, complete genome 31674-31705 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027764 Escherichia coli strain 2015C-3125 plasmid unnamed1 26600-26631 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027339 Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence 8430-8461 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027556 Escherichia coli strain 2013C-3513 plasmid unnamed2 32599-32630 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027386 Escherichia coli strain 2014C-3057 plasmid unnamed 40779-40810 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027354 Escherichia coli strain 2012C-4606 plasmid unnamed2 30692-30723 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027583 Escherichia coli strain 2013C-4538 plasmid unnamed 57151-57182 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP027318 Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence 3765-3796 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NC_013369 Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence 32096-32127 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 AP019704 Escherichia coli O145:H28 10942 plasmid pO145_10942_1 DNA, complete genome 31674-31705 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP022408 Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence 52027-52058 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP028115 Escherichia coli O26 str. RM8426 plasmid pRM8426, complete sequence 32096-32127 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP028380 Escherichia coli O145 str. RM9872 plasmid pRM9872-1, complete sequence 57367-57398 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 CP027321 Escherichia coli strain 2014C-3084 plasmid unnamed2 26176-26207 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 CP027359 Escherichia coli strain 2014C-4639 plasmid unnamed1 27599-27630 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP031920 Escherichia coli O145:NM strain FWSEC0002 plasmid unnamed9, complete sequence 43099-43130 10 0.688
NC_012214_4 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951577-951608 32 NZ_CP028111 Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence 71415-71446 10 0.688
NC_012214_4 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951637-951668 32 NZ_CP011248 Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence 184632-184663 10 0.688
NC_012214_4 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951637-951668 32 NZ_CP032919 Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence 184393-184424 10 0.688
NC_012214_4 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951637-951668 32 NZ_CP033029 Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence 184477-184508 10 0.688
NC_012214_4 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT 951757-951788 32 NC_017273 Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence 373760-373791 10 0.688
NC_012214_6 6.1|961959|32|NC_012214|PILER-CR,CRT 961959-961990 32 NC_016108 Methylomicrobium alcaliphilum 20Z plasmid MEALZ_p, complete sequence 57799-57830 10 0.688
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 785798-785829 10 0.688
NC_012214_6 6.3|962079|32|NC_012214|PILER-CR,CRT 962079-962110 32 NZ_CP043439 Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence 152054-152085 10 0.688
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NC_012858 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence 574958-574993 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NC_011366 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence 430463-430498 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP050093 Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence 16812-16847 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP050082 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence 17805-17840 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NC_008384 Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence 16818-16853 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP049732 Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence 16759-16794 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP013634 Rhizobium sp. N324 plasmid pRspN324d, complete sequence 13141-13176 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP054023 Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence 283203-283238 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP054033 Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence 442890-442925 10 0.722
NC_012214_6 6.5|961955|36|NC_012214|CRISPRCasFinder 961955-961990 36 NZ_CP053208 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence 16757-16792 10 0.722
NC_012214_6 6.6|962015|36|NC_012214|CRISPRCasFinder 962015-962050 36 NZ_CP022416 Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence 403643-403678 11 0.694

1. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048112 (Klebsiella michiganensis strain BD177 plasmid unnamed6) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

2. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045219 (Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

3. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026384 (Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

4. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035200 (Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

5. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045693 (Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

6. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to CP052480 (Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence) position: , mismatch: 0, identity: 1.0

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatgataattttcttgcttctattacta	Protospacer
********************************

7. spacer 3.3|941367|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017585 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ04, complete sequence) position: , mismatch: 0, identity: 1.0

acagtcaaccagtaccactccatttttttcgt	CRISPR spacer
acagtcaaccagtaccactccatttttttcgt	Protospacer
********************************

8. spacer 3.3|941367|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017587 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ06, complete sequence) position: , mismatch: 0, identity: 1.0

acagtcaaccagtaccactccatttttttcgt	CRISPR spacer
acagtcaaccagtaccactccatttttttcgt	Protospacer
********************************

9. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026280 (Klebsiella oxytoca strain KONIH2 plasmid pKPC-55bf, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

10. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_005814 (Yersinia pestis biovar Microtus str. 91001 plasmid pCRY, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

11. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048112 (Klebsiella michiganensis strain BD177 plasmid unnamed6) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

12. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041104 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH07 plasmid unnamed5, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

13. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018922 (Serratia marcescens strain UMH7 plasmid unnamed5, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

14. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

15. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022119 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

16. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026388 (Leclercia sp. LSNIH3 plasmid pLEC-2975, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

17. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026384 (Serratia sp. SSNIH1 plasmid pSER-840e, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

18. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035200 (Klebsiella pneumoniae strain LH375 plasmid pLH375-3, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

19. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_010726 (Klebsiella pneumoniae plasmid pMET-1, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

20. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019191 (Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_02, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

21. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045693 (Klebsiella pneumoniae strain TK421 plasmid pTK421_3, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

22. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to CP052480 (Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-4, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

23. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to MN823994 (Leclercia adecarboxylata strain 150707804 plasmid p707804-2FII, complete sequence) position: , mismatch: 1, identity: 0.969

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttcctttt	Protospacer
*** ****************************

24. spacer 3.8|941673|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to FQ482085 (Erwinia tasmaniensis phage phiEt88 complete genome) position: , mismatch: 1, identity: 0.969

acggatgttgatattggggacgtaataggttg	CRISPR spacer
acgaatgttgatattggggacgtaataggttg	Protospacer
***.****************************

25. spacer 3.8|941673|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_015295 (Erwinia phage phiEt88, complete genome) position: , mismatch: 1, identity: 0.969

acggatgttgatattggggacgtaataggttg	CRISPR spacer
acgaatgttgatattggggacgtaataggttg	Protospacer
***.****************************

26. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU176944 (Citrobacter freundii strain WCHCF65 plasmid pKPC2_CF65, complete sequence) position: , mismatch: 1, identity: 0.969

attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
attgacgaaattttggcaacgctgaaactgcc	Protospacer
***************.****************

27. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030267 (Klebsiella pneumoniae subsp. pneumoniae strain SC-7 plasmid pSC7-KPC, complete sequence) position: , mismatch: 1, identity: 0.969

attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
attgacgaaattttggcaacgctgaaactgcc	Protospacer
***************.****************

28. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028389 (Klebsiella pneumoniae strain WCHKP13F2 plasmid pKPC2_095132, complete sequence) position: , mismatch: 1, identity: 0.969

attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
attgacgaaattttggcaacgctgaaactgcc	Protospacer
***************.****************

29. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043008 (Citrobacter portucalensis strain WCHCP085039 plasmid pKPC2_085039, complete sequence) position: , mismatch: 1, identity: 0.969

attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
attgacgaaattttggcaacgctgaaactgcc	Protospacer
***************.****************

30. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to FQ482085 (Erwinia tasmaniensis phage phiEt88 complete genome) position: , mismatch: 1, identity: 0.969

cccgttgtggctcaaagccggagatcagcacc	CRISPR spacer
cccgttgtgactcaaagccggagatcagcacc	Protospacer
*********.**********************

31. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_015295 (Erwinia phage phiEt88, complete genome) position: , mismatch: 1, identity: 0.969

cccgttgtggctcaaagccggagatcagcacc	CRISPR spacer
cccgttgtgactcaaagccggagatcagcacc	Protospacer
*********.**********************

32. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP032236 (Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence) position: , mismatch: 1, identity: 0.969

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagttgcgaacagatttcggggggtttttgca	Protospacer
****.***************************

33. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP013915 (Serratia fonticola strain GS2 plasmid pSF002, complete sequence) position: , mismatch: 1, identity: 0.969

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagttgcgaacagatttcggggggtttttgca	Protospacer
****.***************************

34. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_LN681230 (Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence) position: , mismatch: 1, identity: 0.969

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagttgcgaacagatttcggggggtttttgca	Protospacer
****.***************************

35. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045219 (Pantoea dispersa strain BJQ0007 plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.938

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatgcattttccttat	Protospacer
*** ************************** *

36. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to CP032292 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0073 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
gctgaatgcctttgccgatacattttcctttt	Protospacer
*** ***************.************

37. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP019446 (Kosakonia cowanii JCM 10956 = DSM 18146 strain 888-76 plasmid p888-76-1, complete sequence) position: , mismatch: 3, identity: 0.906

aagtcgc-gaacagatttcggggggtttttgca	CRISPR spacer
-agttgctaaacagatttcggggggtttttgca	Protospacer
 ***.** .************************

38. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP040393 (Kosakonia radicincitans strain DSM 107547 plasmid pKrDSM107547, complete sequence) position: , mismatch: 3, identity: 0.906

aagtcgc-gaacagatttcggggggtttttgca	CRISPR spacer
-agttgcttaacagatttcggggggtttttgca	Protospacer
 ***.**  ************************

39. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP022661 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-1, complete sequence) position: , mismatch: 4, identity: 0.875

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagattcg-acagatttcggggggtttttgca	Protospacer
 *** . ** ***********************

40. spacer 6.10|962199|32|NC_012214|CRT matches to CP053403 (Salmonella enterica strain 2010K-2057 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagattcg-acagatttcggggggtttttgca	Protospacer
 *** . ** ***********************

41. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP022492 (Salmonella enterica subsp. enterica serovar Saintpaul strain SA20031783 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagactc-tacagatttcggggggtttttgca	Protospacer
 *** * *  ***********************

42. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP019182 (Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 plasmid pATCC10720, complete sequence) position: , mismatch: 4, identity: 0.875

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagattcg-acagatttcggggggtttttgca	Protospacer
 *** . ** ***********************

43. spacer 6.9|962195|36|NC_012214|CRISPRCasFinder matches to NZ_CP032236 (Yersinia ruckeri strain NHV_3758 plasmid pYR4, complete sequence) position: , mismatch: 5, identity: 0.861

gaaaaagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
cgccaagttgcgaacagatttcggggggtttttgca	Protospacer
 .  ****.***************************

44. spacer 6.9|962195|36|NC_012214|CRISPRCasFinder matches to NZ_CP013915 (Serratia fonticola strain GS2 plasmid pSF002, complete sequence) position: , mismatch: 5, identity: 0.861

gaaaaagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
cgccaagttgcgaacagatttcggggggtttttgca	Protospacer
 .  ****.***************************

45. spacer 6.9|962195|36|NC_012214|CRISPRCasFinder matches to NZ_LN681230 (Yersinia ruckeri strain CSF007-82 plasmid pYR3, complete sequence) position: , mismatch: 5, identity: 0.861

gaaaaagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
cgccaagttgcgaacagatttcggggggtttttgca	Protospacer
 .  ****.***************************

46. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP024882 (Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 5, identity: 0.844

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagactc-tacagatttcggggggtttgtgca	Protospacer
 *** * *  ****************** ****

47. spacer 6.10|962199|32|NC_012214|CRT matches to CP053577 (Salmonella enterica strain 2012K-0845 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

--aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caaagt--tgaccagatttcagggggtttttgca	Protospacer
  ****  .** ********.*************

48. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP032180 (Citrobacter freundii strain AR_0116 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagactc-tacagatttcggggggtttgtgca	Protospacer
 *** * *  ****************** ****

49. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP037863 (Citrobacter sp. LY-1 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caagactc-tacagatttcggggggtttgtgca	Protospacer
 *** * *  ****************** ****

50. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to MN693155 (Marine virus AFVG_25M94, complete genome) position: , mismatch: 6, identity: 0.812

ctttgatgataattttcttgcttctattacta	CRISPR spacer
gtataatgctaattttcttgcttctatttctg	Protospacer
 * *.*** ******************* **.

51. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to MN694517 (Marine virus AFVG_250M306, complete genome) position: , mismatch: 6, identity: 0.812

ctttgatgataattttcttgcttctattacta-	CRISPR spacer
aattgatgataattttgttgcatcta-aactaa	Protospacer
  ************** **** ****  **** 

52. spacer 4.7|951877|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to FQ482085 (Erwinia tasmaniensis phage phiEt88 complete genome) position: , mismatch: 6, identity: 0.812

ggaaacgaacagcgttttccactgcattaatg	CRISPR spacer
ggaaacaaacagcgttttccactgcgcaaggg	Protospacer
******.******************.. *. *

53. spacer 4.7|951877|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_015295 (Erwinia phage phiEt88, complete genome) position: , mismatch: 6, identity: 0.812

ggaaacgaacagcgttttccactgcattaatg	CRISPR spacer
ggaaacaaacagcgttttccactgcgcaaggg	Protospacer
******.******************.. *. *

54. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 6, identity: 0.812

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctatctcgccgaggt	Protospacer
. **************** * ******* * *

55. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 6, identity: 0.812

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaggt	Protospacer
. **************** * ******* * *

56. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaggt	Protospacer
. **************** * ******* * *

57. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaggt	Protospacer
. **************** * ******* * *

58. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 6, identity: 0.812

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaggt	Protospacer
. **************** * ******* * *

59. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP034939 (Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence) position: , mismatch: 6, identity: 0.812

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agaactggtacagatttcggggggtttttgca	Protospacer
*.. *  * ***********************

60. spacer 2.9|930901|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

aggttagaaacgaacaagtcggcatcaacgcc	CRISPR spacer
agccaagaatcgaacaaggcggcatcaactcg	Protospacer
** . **** ******** ********** * 

61. spacer 2.9|930901|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to AY048850 (Natrinema virus SNJ1, complete genome) position: , mismatch: 7, identity: 0.781

aggttagaaacgaacaagtcggcatcaacgcc	CRISPR spacer
acgtgcgaaacgaaaaagtcgacatcaacatc	Protospacer
* **  ******** ******.*******..*

62. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
tcttggtgataattttcttgcatctatttttt	Protospacer
..***.*************** ****** .* 

63. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to MN582060 (Podoviridae sp. ctg2L5, complete genome) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta-	CRISPR spacer
tattgttgataatattcttgcttctacc-ctac	Protospacer
. *** ******* ************.. *** 

64. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NC_017421 (Borreliella burgdorferi N40 plasmid N40_lp38, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
cataggtgataattttcttggttttattaaaa	Protospacer
* * *.************** **.*****  *

65. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NC_001856 (Borreliella burgdorferi B31 plasmid lp38, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
cataggtgataattttcttggttttattaaaa	Protospacer
* * *.************** **.*****  *

66. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019853 (Borreliella burgdorferi plasmid lp38, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
cataggtgataattttcttggttttattaaaa	Protospacer
* * *.************** **.*****  *

67. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019764 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
cataggtgataattttcttggttttattaaaa	Protospacer
* * *.************** **.*****  *

68. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017217 (Borreliella burgdorferi strain B331 plasmid B331_lp38, complete sequence) position: , mismatch: 7, identity: 0.781

ctttgatgataattttcttgcttctattacta	CRISPR spacer
cataggtgataattttcttggttttattaaaa	Protospacer
* * *.************** **.*****  *

69. spacer 3.13|941978|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

gtgatc--tgcgctgcttctgccactgtgcattc	CRISPR spacer
--ggtcgatgtgctgtttctgccactgtgcagcc	Protospacer
  *.**  **.****.*************** .*

70. spacer 3.13|941978|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 7, identity: 0.781

gtgatc--tgcgctgcttctgccactgtgcattc	CRISPR spacer
--ggtcgatgtgctgtttctgccactgtgcagcc	Protospacer
  *.**  **.****.*************** .*

71. spacer 3.14|942039|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to MN855819 (Bacteriophage sp. isolate 156, complete genome) position: , mismatch: 7, identity: 0.781

ttgtcgcaatcgctgctggtgagtggttcgtg	CRISPR spacer
tagaggcaatcgctggtggtgattggttcaag	Protospacer
* *  ********** ****** ******. *

72. spacer 4.8|951937|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to KX397365 (Erwinia phage vB_EamM_Caitlin, complete genome) position: , mismatch: 7, identity: 0.781

cattcgtct--tgccatctcttcgaccggcagca	CRISPR spacer
--ctcatccaatggcatctcttcaaccggcagca	Protospacer
  .**.**.  ** *********.**********

73. spacer 5.1|952340|32|NC_012214|CRISPRCasFinder matches to NZ_CP044357 (Acinetobacter baumannii strain CAM180-1 plasmid pCAM180A, complete sequence) position: , mismatch: 7, identity: 0.781

atagcgatatatattattgatagttaatgatt	CRISPR spacer
tgatctaaatataatattgatatttaatgatt	Protospacer
  * * * ***** ******** *********

74. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

75. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

76. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

77. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

78. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

79. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctatctcgccgaagt	Protospacer
. **************** * ******* . *

80. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctatctcgccgaagt	Protospacer
. **************** * ******* . *

81. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctatctcgccgaagt	Protospacer
. **************** * ******* . *

82. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctatctcgccgaagt	Protospacer
. **************** * ******* . *

83. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgccgaagt	Protospacer
. **************** * ******* . *

84. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_016907 (Gordonia polyisoprenivorans VH2 plasmid p174, complete sequence) position: , mismatch: 7, identity: 0.781

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
ctgtggctgccgctgctgatactcgccgtgat	Protospacer
..*  ************ * ********** *

85. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

---tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
aacccggc---gccgctgctcgaactcgacgtgca	Protospacer
   .****   **********.****** ***** 

86. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP025983 (Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agtttctagacagatttcggggggtttttgca	Protospacer
*. *. ...***********************

87. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP017586 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ05, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agttcattgacagatttcagggggtttttgca	Protospacer
*. **.. .*********.*************

88. spacer 6.10|962199|32|NC_012214|CRT matches to NC_023025 (Cronobacter malonaticus plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agtttctgtacagatttcagggggtttttgca	Protospacer
*. *. .* *********.*************

89. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP011050 (Cronobacter sakazakii strain ATCC 29544 plasmid CSK29544_3p, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agtttctgtacagatttcagggggtttttgca	Protospacer
*. *. .* *********.*************

90. spacer 6.10|962199|32|NC_012214|CRT matches to NC_013285 (Cronobacter turicensis z3032 plasmid pCTU3, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
agtttctgtacagatttcagggggtttttgca	Protospacer
*. *. .* *********.*************

91. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP039454 (Enterobacter bugandensis strain 220 plasmid pSurvcare220, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

92. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP017590 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ09, complete sequence) position: , mismatch: 7, identity: 0.781

-aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
caaaacg-agacagatttcagggagtttttgca	Protospacer
 **. ** ..*********.***.*********

93. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP019840 (Enterobacter roggenkampii strain R11 plasmid pASM1, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

94. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP022149 (Enterobacter roggenkampii strain 704SK10 plasmid p704SK10_1, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

95. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP009855 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH5 plasmid pENT-22e, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

96. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP008907 (Enterobacter hormaechei subsp. hoffmannii ECR091 plasmid pENT-4bd, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

97. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP033798 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

98. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP026851 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0072 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

99. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP029719 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0154 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aagatgatgacagatgtcggggggtttgtgca	Protospacer
*** .*  .****** *********** ****

100. spacer 2.1|930412|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_048768 (Gordonia phage Chelms, complete genome) position: , mismatch: 8, identity: 0.75

cctcgcgtccgtgcggggctttgctatcatta	CRISPR spacer
cctcgcgtccgtgcgcggccttgttgtactcg	Protospacer
*************** ***.***.*.*  *..

101. spacer 2.1|930412|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to MT986029 (Gordonia phage Linetti, complete genome) position: , mismatch: 8, identity: 0.75

cctcgcgtccgtgcggggctttgctatcatta	CRISPR spacer
cctcgcgtccgtgcgcggccttgttgtactcg	Protospacer
*************** ***.***.*.*  *..

102. spacer 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040754 (Sulfitobacter sp. BSw21498 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gttccaggcttgccgcacatcaccagcccacc	CRISPR spacer
atggcctgcttgccgcacatcaccagaccagg	Protospacer
.*  *  ******************* ***  

103. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 8, identity: 0.75

--attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
tagttatc--aattttgaaaacggtgaaactgct	Protospacer
  .**. *  ******** **** *********.

104. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to LT546029 (Enterococcus phage VFW genome assembly, chromosome: VFW) position: , mismatch: 8, identity: 0.75

-----attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
tagttatt-----aattttgaaaacggtgaaactgct	Protospacer
     ***     ******** **** *********.

105. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.75

--attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
tagttatc--aattttgaaaacggtgaaactgct	Protospacer
  .**. *  ******** **** *********.

106. spacer 4.4|951697|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to MT119361 (Enterococus phage vipetofem, complete genome) position: , mismatch: 8, identity: 0.75

--attgacgaaattttgacaacgctgaaactgcc	CRISPR spacer
tagttatc--aattttgaaaacggtgaaactgct	Protospacer
  .**. *  ******** **** *********.

107. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cccgttgtggctcaaagccggagatcagcacc-	CRISPR spacer
aacgttgtggctccatgccggagatc-gtatgg	Protospacer
  *********** * ********** *.*.  

108. spacer 5.1|952340|32|NC_012214|CRISPRCasFinder matches to MN855600 (Bacteriophage sp. isolate 296, complete genome) position: , mismatch: 8, identity: 0.75

atagcgatatatattattgatagttaatgatt	CRISPR spacer
gtgcaaatatatattattgaaagttaattatg	Protospacer
.*.  .************** ******* ** 

109. spacer 5.1|952340|32|NC_012214|CRISPRCasFinder matches to NZ_CP014237 (Moraxella osloensis strain CCUG 350 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

atagcgatatatattattgatagttaatgatt	CRISPR spacer
aatttcatataaattattgatatttaatgaat	Protospacer
*   . ***** ********** ******* *

110. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

111. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

112. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

113. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

114. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

115. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgagcgctgccgctgctctatctcgccgaagt	Protospacer
. .*************** * ******* . *

116. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_021289 (Burkholderia insecticola plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
tcggcgctgccgctgcgcaagctcacgtcacg	Protospacer
**************** ***.***.*  ..* 

117. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 8, identity: 0.75

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cgggcgctgccgctgctctacctcgcggaagt	Protospacer
. **************** * ***** * . *

118. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NC_015163 (Deinococcus proteolyticus MRP plasmid pDEIPR04, complete sequence) position: , mismatch: 8, identity: 0.75

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
ggctgcggcaccacctcagcgccctggcccgc	Protospacer
.*.. ******************* * **.*.

119. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NC_015162 (Deinococcus proteolyticus MRP plasmid pDEIPR02, complete sequence) position: , mismatch: 8, identity: 0.75

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
ggctgcggcaccacctcagcgccctgacccgc	Protospacer
.*.. ******************* * **.*.

120. spacer 6.10|962199|32|NC_012214|CRT matches to NC_016515 (Enterobacter ludwigii strain EcWSU1 plasmid pEcWSU1_A, complete sequence) position: , mismatch: 8, identity: 0.75

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aaagtggatacagatttcagggggtttgtgca	Protospacer
**. .* . *********.******** ****

121. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP033799 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aaagtggatacagatttcagggggtttgtgca	Protospacer
**. .* . *********.******** ****

122. spacer 6.10|962199|32|NC_012214|CRT matches to NZ_CP022534 (Enterobacter hormaechei strain MS7884A plasmid pMS7884B, complete sequence) position: , mismatch: 8, identity: 0.75

aagtcgcgaacagatttcggggggtttttgca	CRISPR spacer
aaagtggatacagatttcagggggtttgtgca	Protospacer
**. .* . *********.******** ****

123. spacer 2.2|930473|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to MT774378 (CrAssphage cr106_1, complete genome) position: , mismatch: 9, identity: 0.719

tttatgacgctgattattatcaggctaaccat	CRISPR spacer
agttggaagctgattattatcaggttaaatct	Protospacer
  *  ** ****************.*** . *

124. spacer 2.7|930779|32|NC_012214|CRISPRCasFinder,CRT matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 9, identity: 0.719

ccgtgttgaagccattggtgttacctctattt	CRISPR spacer
tggtcttgaagccattggtgtgacctgtcagc	Protospacer
. ** **************** **** *   .

125. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 9, identity: 0.719

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatcatagttttcttgcttaaagccttt	Protospacer
******* ***.***********  * . .* 

126. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 9, identity: 0.719

ctttgatgataattttcttgcttctattacta	CRISPR spacer
ctttgatcatagttttcttgcttaaagccttt	Protospacer
******* ***.***********  * . .* 

127. spacer 3.4|941428|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045341 (Vibrio sp. THAF190c plasmid pTHAF190c_c, complete sequence) position: , mismatch: 9, identity: 0.719

aaagtttggcagatgcgctacaagattgaagg	CRISPR spacer
aattgttggcagatgcgttacaaaattggcta	Protospacer
**   ************.*****.****.  .

128. spacer 3.10|941795|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_011143 (Phenylobacterium zucineum HLK1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

catggccacccggccaaccacgatccagttat	CRISPR spacer
catggccaccaggccgaccacgagcacaaggt	Protospacer
********** ****.******* *  .  .*

129. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_005241 (Cupriavidus necator H16 megaplasmid pHG1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgttgtggctcaaagccggagatcagcacc	CRISPR spacer
gccgctgtggctcaaggccggagactgggtcg	Protospacer
 ***.**********.********...*  * 

130. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039289 (Cupriavidus necator H16 plasmid pHG1, complete sequence) position: , mismatch: 9, identity: 0.719

cccgttgtggctcaaagccggagatcagcacc	CRISPR spacer
gccgctgtggctcaaggccggagactgggtcg	Protospacer
 ***.**********.********...*  * 

131. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
acgttctggccgctgctcatgctcgccgtgca	Protospacer
 ** . . *********** .********** 

132. spacer 6.2|962019|32|NC_012214|PILER-CR,CRT matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 9, identity: 0.719

accatcactgacagcgaagcccggaataaacc	CRISPR spacer
accatcgctgacagcgaagcgcggcccgtagt	Protospacer
******.************* ***  .. * .

133. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to MH727545 (Mycobacterium phage DismalStressor, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

134. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

135. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to MH834601 (Mycobacterium phage BoostSeason, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

136. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to KX688047 (Mycobacterium phage Marcoliusprime, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

137. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NC_028759 (Mycobacterium phage Mufasa, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

138. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to MF140408 (Mycobacterium phage DismalFunk, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

139. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to MF140411 (Mycobacterium phage Findley, complete genome) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cgccccggcgccaccgcagcgcccagcggatg	Protospacer
 *.******.***** ***********     

140. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NZ_CP031159 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdA, complete sequence) position: , mismatch: 9, identity: 0.719

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
cagacggccaccaccacagcgcccggccctgc	Protospacer
 .  * * ******* ********.******.

141. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagtcgggcgctgccgctgctctacctcgccgaggt	Protospacer
 *. . **************** * ******* * *

142. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagtcgggcgctgccgctgctctacctcgccgaggt	Protospacer
 *. . **************** * ******* * *

143. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 9, identity: 0.75

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaggt	Protospacer
 *. . **************** * ******* * *

144. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 9, identity: 0.75

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctatctcgccgaggt	Protospacer
 *. . **************** * ******* * *

145. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 9, identity: 0.75

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaggt	Protospacer
 *. . **************** * ******* * *

146. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021931 (Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence) position: , mismatch: 10, identity: 0.688

ctttgatgataattttcttgcttctattacta	CRISPR spacer
gcgttatgataattttcttgcgtcaatttgat	Protospacer
 . * **************** ** ***    

147. spacer 2.10|930962|32|NC_012214|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050806 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence) position: , mismatch: 10, identity: 0.688

ctttgatgataattttcttgcttctattacta	CRISPR spacer
gcgttatgataattttcttgcgtcaatttgat	Protospacer
 . * **************** ** ***    

148. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024444 (Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence) position: , mismatch: 10, identity: 0.688

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
ttttaatgcctttgtcgatgcacttttgaagc	Protospacer
 .************.*******.***.    .

149. spacer 3.2|941306|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040258 (Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence) position: , mismatch: 10, identity: 0.688

gcttaatgcctttgccgatgcattttcctttt	CRISPR spacer
ttttaatgcctttgtcgatgcacttttgaagc	Protospacer
 .************.*******.***.    .

150. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to CP051632 (Escherichia coli O121 strain FDA858783-1-52 plasmid pFNW19M81, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

151. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028113 (Escherichia coli O103 str. RM8385 plasmid pRM8385-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

152. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031911 (Escherichia coli O121:H19 strain FWSEC0006 plasmid unnamed15, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

153. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031923 (Escherichia coli O26:H11 strain FWSEC0001 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

154. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027220 (Escherichia coli strain 2015C-3163 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

155. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027578 (Escherichia coli strain 2013C-4225 plasmid unnamed) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

156. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027350 (Escherichia coli strain 2014C-3655 plasmid unnamed) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

157. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037944 (Escherichia coli strain CFSAN027343 plasmid pCFSAN027343, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

158. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027547 (Escherichia coli strain 2013C-4187 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

159. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027391 (Escherichia coli strain 2015C-4944 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

160. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_012487 (Escherichia coli plasmid pO26-Vir, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

161. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027444 (Escherichia coli strain 2013C-3252 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

162. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027473 (Escherichia coli strain 2014C-3050 plasmid unnamed) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

163. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_013728 (Escherichia coli O26:H- plasmid pO26-CRL, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

164. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027601 (Escherichia coli strain 97-3250 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

165. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027436 (Escherichia coli strain 2014C-3599 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

166. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006028 (Escherichia coli O145:H28 str. RM13514 plasmid pO145-13514, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

167. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to AP019709 (Escherichia coli O145:H28 122715 plasmid pO145_122715_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

168. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027456 (Escherichia coli strain 2014C-4423 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

169. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018810 (Escherichia coli strain E2865 plasmid pE2865-2, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

170. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037946 (Escherichia coli strain CFSAN027346 plasmid pCFSAN027346-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

171. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to AP019707 (Escherichia coli O145:H28 112648 plasmid pO145_112648_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

172. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027764 (Escherichia coli strain 2015C-3125 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

173. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027339 (Escherichia coli strain 2014C-3051 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

174. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027556 (Escherichia coli strain 2013C-3513 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

175. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027386 (Escherichia coli strain 2014C-3057 plasmid unnamed) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

176. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027354 (Escherichia coli strain 2012C-4606 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

177. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027583 (Escherichia coli strain 2013C-4538 plasmid unnamed) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

178. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027318 (Escherichia coli strain 2015C-3107 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

179. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_013369 (Escherichia coli O26:H11 str. 11368 plasmid pO26_1, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

180. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to AP019704 (Escherichia coli O145:H28 10942 plasmid pO145_10942_1 DNA, complete genome) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

181. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022408 (Escherichia coli O121:H19 strain 16-9255 plasmid punamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

182. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028115 (Escherichia coli O26 str. RM8426 plasmid pRM8426, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

183. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028380 (Escherichia coli O145 str. RM9872 plasmid pRM9872-1, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

184. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to CP027321 (Escherichia coli strain 2014C-3084 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

185. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to CP027359 (Escherichia coli strain 2014C-4639 plasmid unnamed1) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

186. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031920 (Escherichia coli O145:NM strain FWSEC0002 plasmid unnamed9, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

187. spacer 4.2|951577|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028111 (Escherichia coli O121 str. RM8352 plasmid pRM8352, complete sequence) position: , mismatch: 10, identity: 0.688

tgccggacagcgtgatgattttcaataaacca	CRISPR spacer
ttgaacacagcctgatgtttttcaataaagac	Protospacer
*   . ***** ***** ***********   

188. spacer 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 10, identity: 0.688

gttccaggcttgccgcacatcaccagcccacc	CRISPR spacer
ctgagagccttgccgcagatcaccagccgtgg	Protospacer
 *   ** ********* **********    

189. spacer 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 10, identity: 0.688

gttccaggcttgccgcacatcaccagcccacc	CRISPR spacer
ctgagagccttgccgcagatcaccagccgtgg	Protospacer
 *   ** ********* **********    

190. spacer 4.3|951637|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 10, identity: 0.688

gttccaggcttgccgcacatcaccagcccacc	CRISPR spacer
ctgagagccttgccgcagatcaccagccgtgg	Protospacer
 *   ** ********* **********    

191. spacer 4.5|951757|32|NC_012214|PILER-CR,CRISPRCasFinder,CRT matches to NC_017273 (Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete sequence) position: , mismatch: 10, identity: 0.688

cccgttgtggctcaaagccggagatcagcacc	CRISPR spacer
ggtccaaaggctcaaagccggagatcactacc	Protospacer
  . . . ******************* .***

192. spacer 6.1|961959|32|NC_012214|PILER-CR,CRT matches to NC_016108 (Methylomicrobium alcaliphilum 20Z plasmid MEALZ_p, complete sequence) position: , mismatch: 10, identity: 0.688

tcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
gaacagctatcgctgctcaaactcgccgtcta	Protospacer
  .  ***..******************* . 

193. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 10, identity: 0.688

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
gtcaccggcaccacctcggcgcccagcagccg	Protospacer
. . *************.*********  .  

194. spacer 6.3|962079|32|NC_012214|PILER-CR,CRT matches to NZ_CP043439 (Cupriavidus campinensis strain MJ1 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

agtcccggcaccacctcagcgcccagccctgt	CRISPR spacer
tctgccggcaccacctcaccgcacagcagatc	Protospacer
  * ************** *** ****    .

195. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctatctcgccgaagt	Protospacer
 *. . **************** * ******* . *

196. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctatctcgccgaagt	Protospacer
 *. . **************** * ******* . *

197. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP050093 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b5, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

198. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

199. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

200. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

201. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

202. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctatctcgccgaagt	Protospacer
 *. . **************** * ******* . *

203. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctatctcgccgaagt	Protospacer
 *. . **************** * ******* . *

204. spacer 6.5|961955|36|NC_012214|CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 10, identity: 0.722

gaaatcggcgctgccgctgctcaaactcgccgtgct	CRISPR spacer
cagccgggcgctgccgctgctctacctcgccgaagt	Protospacer
 *. . **************** * ******* . *

205. spacer 6.6|962015|36|NC_012214|CRISPRCasFinder matches to NZ_CP022416 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-1, complete sequence) position: , mismatch: 11, identity: 0.694

gaaaaccatcactgacagcgaagcccggaataaacc	CRISPR spacer
agaaaccatcgctgacagcgaagcgcggcccgtagt	Protospacer
..********.************* ***  .. * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 685462 : 736894 48 Salmonella_phage(75.0%) plate,lysis,transposase NA
DBSCAN-SWA_2 1606878 : 1613809 7 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_3 1978495 : 2005154 38 Pseudoalteromonas_phage(15.0%) holin NA
DBSCAN-SWA_4 2224639 : 2330244 114 Salmonella_phage(22.22%) portal,terminase,tail,head,lysis,holin,transposase,integrase,plate,protease,tRNA,capsid attL 2270771:2270785|attR 2327632:2327646
DBSCAN-SWA_5 2887225 : 2894483 6 Bacillus_virus(33.33%) protease NA
DBSCAN-SWA_6 3452249 : 3460758 9 Brevibacillus_phage(33.33%) NA NA
DBSCAN-SWA_7 3483405 : 3505347 20 uncultured_virus(80.0%) transposase NA
DBSCAN-SWA_8 3835329 : 3898435 48 Liberibacter_phage(10.0%) protease,integrase,transposase attL 3834544:3834559|attR 3861383:3861398
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage