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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_010320 Thermoanaerobacter sp. X514, complete genome 4 crisprs RT,csa3,cas3,cas4,Cas14b_CAS-V-F,DEDDh,csm3gr7,csx19,cas10,csx1,csx20,cas14k,cas2,cas1,cas5,cas7b,cas8b1,cas6 0 22 4 0

Results visualization

1. NC_010320
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010320_1 764967-765396 Orphan NA
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010320_2 2340404-2341103 Unclear NA
10 spacers
cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010320_3 2342735-2346872 Unclear NA
62 spacers
cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_010320_4 2348502-2363082 TypeI-B NA
219 spacers
cas4,cas1,cas2,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_010320_4 4.133|2357304|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2357304-2357339 36 NC_004979 Thermoanaerobacterium thermosaccharolyticum plasmid pNB2, complete sequence 512-547 3 0.917
NC_010320_4 4.194|2361354|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2361354-2361388 35 MH937499 Streptococcus phage CHPC1062, complete genome 26406-26440 3 0.914
NC_010320_4 4.194|2361354|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2361354-2361388 35 MH937467 Streptococcus phage CHPC877, complete genome 26183-26217 3 0.914
NC_010320_4 4.203|2361953|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2361953-2361989 37 KX190835 Bacillus phage vB_BtS_BMBtp15, complete genome 4338-4374 7 0.811
NC_010320_3 3.53|2346208|35|NC_010320|CRT,PILER-CR,CRISPRCasFinder 2346208-2346242 35 MK560763 Virgibacillus phage Mimir87, complete genome 13001-13035 8 0.771
NC_010320_4 4.61|2352517|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2352517-2352552 36 NZ_CP050185 Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence 130928-130963 8 0.778
NC_010320_4 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2353112-2353147 36 AJ972879 Yersinia phage phiR1-37 complete genome 118493-118528 8 0.778
NC_010320_4 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2353112-2353147 36 NC_016163 Yersinia phage phiR1-37, complete genome 118493-118528 8 0.778
NC_010320_4 4.151|2358499|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2358499-2358533 35 GU557055 Puniceispirillum phage HMO-2011, complete genome 8150-8184 8 0.771
NC_010320_4 4.191|2361155|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2361155-2361191 37 KT070867 Bacillus phage PBC2, complete genome 71869-71905 8 0.784
NC_010320_4 4.202|2361887|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2361887-2361922 36 NC_010631 Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence 339077-339112 8 0.778
NC_010320_4 4.17|2349594|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2349594-2349629 36 NC_017232 Borreliella afzelii PKo plasmid lp17, complete sequence 13620-13655 9 0.75
NC_010320_4 4.20|2349792|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2349792-2349827 36 NC_010821 Pseudomonas phage 201phi2-1, complete genome 82643-82678 9 0.75
NC_010320_4 4.22|2349924|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2349924-2349959 36 NC_010821 Pseudomonas phage 201phi2-1, complete genome 82643-82678 9 0.75
NC_010320_4 4.32|2350591|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350591-2350627 37 NZ_MK715471 Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence 68476-68512 9 0.757
NC_010320_4 4.32|2350591|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350591-2350627 37 NZ_CP053838 Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence 60562-60598 9 0.757
NC_010320_4 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350724-2350760 37 FJ008913 Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome 40437-40473 9 0.757
NC_010320_4 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350724-2350760 37 NC_011222 Bacteroides phage B40-8, complete genome 40437-40473 9 0.757
NC_010320_4 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350724-2350760 37 NC_016770 Bacteroides phage B124-14, complete genome 29045-29081 9 0.757
NC_010320_4 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350724-2350760 37 HE608841 Bacteroides phage B124-14 complete genome 29045-29081 9 0.757
NC_010320_4 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350724-2350760 37 MT630433 Bacteroides phage vB_BfrS_23, complete genome 32287-32323 9 0.757
NC_010320_4 4.61|2352517|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2352517-2352552 36 MT774380 CrAssphage cr1_1, complete genome 73256-73291 9 0.75
NC_010320_4 4.68|2352979|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2352979-2353015 37 NZ_MK715471 Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence 68476-68512 9 0.757
NC_010320_4 4.68|2352979|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2352979-2353015 37 NZ_CP053838 Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence 60562-60598 9 0.757
NC_010320_4 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2353112-2353147 36 MH319749 Marine virus AG-345-F15 Ga0172271_11 genomic sequence 65406-65441 9 0.75
NC_010320_4 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2353112-2353147 36 MH319754 Marine virus AG-345-L05 Ga0172272_11 genomic sequence 45033-45068 9 0.75
NC_010320_4 4.169|2359694|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2359694-2359729 36 MN693855 Marine virus AFVG_250M616, complete genome 10012-10047 9 0.75
NC_010320_3 3.20|2344024|36|NC_010320|CRT,PILER-CR,CRISPRCasFinder 2344024-2344059 36 MK448820 Streptococcus phage Javan617, complete genome 4422-4457 10 0.722
NC_010320_4 4.27|2350257|38|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2350257-2350294 38 AP014323 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C38, *** SEQUENCING IN PROGRESS *** 35416-35453 10 0.737
NC_010320_1 1.3|765129|37|NC_010320|PILER-CR,CRT 765129-765165 37 NZ_CP046255 Sphingobium sp. CAP-1 plasmid p2, complete sequence 8928-8964 11 0.703
NC_010320_1 1.3|765129|37|NC_010320|PILER-CR,CRT 765129-765165 37 NZ_CP046255 Sphingobium sp. CAP-1 plasmid p2, complete sequence 19344-19380 11 0.703
NC_010320_4 4.82|2353907|38|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2353907-2353944 38 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 159178-159215 11 0.711
NC_010320_4 4.175|2360093|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360093-2360129 37 CP053333 Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence 102327-102363 12 0.676
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039212 Piscirickettsia salmonis strain Psal-103 plasmid unnamed3, complete sequence 28546-28580 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP048069 Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence 8789-8823 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP048069 Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence 47135-47169 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038896 Piscirickettsia salmonis strain Psal-006a plasmid unnamed3, complete sequence 11933-11967 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038925 Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence 46143-46177 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038955 Piscirickettsia salmonis strain Psal-040 plasmid unnamed3, complete sequence 11934-11968 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038960 Piscirickettsia salmonis strain Psal-041 plasmid unnamed3, complete sequence 10519-10553 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039200 Piscirickettsia salmonis strain Psal-161 plasmid unnamed5, complete sequence 15199-15233 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038813 Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence 46142-46176 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP013771 Piscirickettsia salmonis strain PM23019A plasmid p3PS3, complete sequence 21140-21174 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP033943 Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence 34616-34650 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP013767 Piscirickettsia salmonis strain PM21567A plasmid p5PS2, complete sequence 11463-11497 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039233 Piscirickettsia salmonis strain SR1 plasmid unnamed6, complete sequence 26242-26276 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP013775 Piscirickettsia salmonis strain PM37984A plasmid p2PS4, complete sequence 34431-34465 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP013780 Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence 5448-5482 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP013780 Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence 47104-47138 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038915 Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence 46143-46177 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039206 Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence 35605-35639 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP050939 Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p1, complete sequence 30854-30888 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038934 Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence 46431-46465 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039221 Piscirickettsia salmonis strain NVI 5692 plasmid unnamed2, complete sequence 61377-61411 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038974 Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence 59567-59601 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP012417 Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-4, complete sequence 3740-3774 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038888 Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence 46144-46178 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP039216 Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence 60780-60814 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038911 Piscirickettsia salmonis strain Psal-009 plasmid unnamed3, complete sequence 10499-10533 12 0.657
NC_010320_4 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR 2360226-2360260 35 NZ_CP038878 Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence 46143-46177 12 0.657

1. spacer 4.133|2357304|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_004979 (Thermoanaerobacterium thermosaccharolyticum plasmid pNB2, complete sequence) position: , mismatch: 3, identity: 0.917

taggttttgtattgtttgtaatactgttagaactgt	CRISPR spacer
tcgattttgtcttgtttgtaatactgttagaactgt	Protospacer
* *.****** *************************

2. spacer 4.194|2361354|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MH937499 (Streptococcus phage CHPC1062, complete genome) position: , mismatch: 3, identity: 0.914

tccatatatcttctgttttccaatcataaattgga	CRISPR spacer
cccaaatatcttctgttttccaatcgtaaattgga	Protospacer
.*** ********************.*********

3. spacer 4.194|2361354|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MH937467 (Streptococcus phage CHPC877, complete genome) position: , mismatch: 3, identity: 0.914

tccatatatcttctgttttccaatcataaattgga	CRISPR spacer
cccaaatatcttctgttttccaatcgtaaattgga	Protospacer
.*** ********************.*********

4. spacer 4.203|2361953|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to KX190835 (Bacillus phage vB_BtS_BMBtp15, complete genome) position: , mismatch: 7, identity: 0.811

cctgaaagcagtgatttatttgaacaaagcaagaaac	CRISPR spacer
acagataagagtgagttatttgaacaaagtaagaaac	Protospacer
 * ** *. ***** **************.*******

5. spacer 3.53|2346208|35|NC_010320|CRT,PILER-CR,CRISPRCasFinder matches to MK560763 (Virgibacillus phage Mimir87, complete genome) position: , mismatch: 8, identity: 0.771

cgtagtttttgaagaagtaaaggaggattactctt	CRISPR spacer
ctttgttttggaagaaataaaggaggatttttcag	Protospacer
* * ***** ******.************ .**  

6. spacer 4.61|2352517|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050185 (Bacillus thuringiensis strain HER1410 plasmid pLUSID2, complete sequence) position: , mismatch: 8, identity: 0.778

---attccgctactatatttgctaattcttcttttgtta	CRISPR spacer
taaatt---gttctttatttggtaattcttcttttgttg	Protospacer
   ***    * ** ****** ****************.

7. spacer 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 8, identity: 0.778

tagaaaacttacacctgaagaaattgaagaaaccgt	CRISPR spacer
tgcaacttttactcctgaacaaattgaagaaacctt	Protospacer
*. **  .**** ****** ************** *

8. spacer 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 8, identity: 0.778

tagaaaacttacacctgaagaaattgaagaaaccgt	CRISPR spacer
tgcaacttttactcctgaacaaattgaagaaacctt	Protospacer
*. **  .**** ****** ************** *

9. spacer 4.151|2358499|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to GU557055 (Puniceispirillum phage HMO-2011, complete genome) position: , mismatch: 8, identity: 0.771

---atgtctgtgcctaccgtggaaggacagggagaagt	CRISPR spacer
ggtaagtc---acctaccgttgaaggacaggaagaaga	Protospacer
   * ***   .******** **********.***** 

10. spacer 4.191|2361155|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 8, identity: 0.784

gattaatgaacatggacaaaaaagcaaaagaaaaagt-----	CRISPR spacer
gattaatgaacatggaaaagaaagc-----aaaacgttttta	Protospacer
**************** **.*****     **** **     

11. spacer 4.202|2361887|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 8, identity: 0.778

cctggatatggggcttggtaaaacctttgttggaag	CRISPR spacer
cgatgttgtggggcttggtaaaacattagttggaac	Protospacer
*   * *.**************** ** ******* 

12. spacer 4.17|2349594|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 9, identity: 0.75

gctgctcttctttttgaaactttttagcttctgcaa	CRISPR spacer
caagttcttcttttgtaaactttttagcttcttctc	Protospacer
   *.*********  **************** *  

13. spacer 4.20|2349792|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_010821 (Pseudomonas phage 201phi2-1, complete genome) position: , mismatch: 9, identity: 0.75

taggttttaaagtacactacagggttggtggtggtg	CRISPR spacer
cacgtcgtaaagtacactacatgtttggtggtgaat	Protospacer
.* **. ************** * *********.  

14. spacer 4.22|2349924|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_010821 (Pseudomonas phage 201phi2-1, complete genome) position: , mismatch: 9, identity: 0.75

taggttttaaagtacactacagggttggtggtggtg	CRISPR spacer
cacgtcgtaaagtacactacatgtttggtggtgaat	Protospacer
.* **. ************** * *********.  

15. spacer 4.32|2350591|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

16. spacer 4.32|2350591|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

17. spacer 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to FJ008913 (Bacteroides phage B40-8 culture-collection ATCC:51477-B1, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.  

18. spacer 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_011222 (Bacteroides phage B40-8, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.  

19. spacer 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_016770 (Bacteroides phage B124-14, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.  

20. spacer 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to HE608841 (Bacteroides phage B124-14 complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.  

21. spacer 4.34|2350724|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MT630433 (Bacteroides phage vB_BfrS_23, complete genome) position: , mismatch: 9, identity: 0.757

aaatgtttgttttgacaaactcaattactttcttttc	CRISPR spacer
aaatctttgttttgccaaactcaattgcggttttcaa	Protospacer
**** ********* ***********.*  *.**.  

22. spacer 4.61|2352517|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 9, identity: 0.75

attccgctactatatttgctaattcttcttttgtta	CRISPR spacer
tataatccaataaatttgataattcttcttttgtta	Protospacer
  *   *.* ** ***** *****************

23. spacer 4.68|2352979|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

24. spacer 4.68|2352979|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.757

aattgtttttcttcttttgtaagttcaagttcaagcc	CRISPR spacer
atctcttgttcttctttggtaagttcaagttctaaat	Protospacer
* .* ** ********* ************** *. .

25. spacer 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MH319749 (Marine virus AG-345-F15 Ga0172271_11 genomic sequence) position: , mismatch: 9, identity: 0.75

tagaaaacttacacctgaagaaattg-------aagaaaccgt	CRISPR spacer
tagaaaacttccacctgaagatattgcttttccaag-------	Protospacer
********** ********** ****       ***       

26. spacer 4.70|2353112|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MH319754 (Marine virus AG-345-L05 Ga0172272_11 genomic sequence) position: , mismatch: 9, identity: 0.75

tagaaaacttacacctgaagaaattg-------aagaaaccgt	CRISPR spacer
tagaaaacttccacctgaagatattgcctttccaag-------	Protospacer
********** ********** ****       ***       

27. spacer 4.169|2359694|36|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to MN693855 (Marine virus AFVG_250M616, complete genome) position: , mismatch: 9, identity: 0.75

ccattcttcccattcttcccattctttctgtctttt	CRISPR spacer
ccattcttcccgtttttcccattcttcttttttaac	Protospacer
***********.**.***********..* *.*  .

28. spacer 3.20|2344024|36|NC_010320|CRT,PILER-CR,CRISPRCasFinder matches to MK448820 (Streptococcus phage Javan617, complete genome) position: , mismatch: 10, identity: 0.722

gggttgtgctttaaaaagtttatgattaacactaca	CRISPR spacer
atgttgtgctataataagtttatgattaaccgattg	Protospacer
. ******** *** ***************    ..

29. spacer 4.27|2350257|38|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to AP014323 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S33-C38, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.737

ggagtaaatcttttttagtgactttgtactttttagtg	CRISPR spacer
gagcaagatctttttgagtgactttgtattttttcatt	Protospacer
*..  *.******** ************.***** .* 

30. spacer 1.3|765129|37|NC_010320|PILER-CR,CRT matches to NZ_CP046255 (Sphingobium sp. CAP-1 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.703

cctttgaagtattttttccttcgataatacagctctc	CRISPR spacer
cctttgaagtattttttccctggatattttgacggga	Protospacer
*******************.* **** * ...*    

31. spacer 1.3|765129|37|NC_010320|PILER-CR,CRT matches to NZ_CP046255 (Sphingobium sp. CAP-1 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.703

cctttgaagtattttttccttcgataatacagctctc	CRISPR spacer
cctttgaagtattttttccctggatattttgacggga	Protospacer
*******************.* **** * ...*    

32. spacer 4.82|2353907|38|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 11, identity: 0.711

gcaagccttaaattatctaaatcataaatctttttgta	CRISPR spacer
aaagattttaaattatctaaatcataaatattttcaat	Protospacer
. *....********************** ****..  

33. spacer 4.175|2360093|37|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.676

atacgtccaggctgtatttccaag-----aaagaaatccctg	CRISPR spacer
ccaaatccaggctgtattttcaagaaacaaaaaagat-----	Protospacer
 .* .**************.****     ***.*.**     

34. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039212 (Piscirickettsia salmonis strain Psal-103 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

35. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048069 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

36. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048069 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

37. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038896 (Piscirickettsia salmonis strain Psal-006a plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

38. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038925 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

39. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038955 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

40. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038960 (Piscirickettsia salmonis strain Psal-041 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

41. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039200 (Piscirickettsia salmonis strain Psal-161 plasmid unnamed5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

42. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038813 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

43. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013771 (Piscirickettsia salmonis strain PM23019A plasmid p3PS3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

44. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033943 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-6, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

45. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013767 (Piscirickettsia salmonis strain PM21567A plasmid p5PS2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

46. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039233 (Piscirickettsia salmonis strain SR1 plasmid unnamed6, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

47. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013775 (Piscirickettsia salmonis strain PM37984A plasmid p2PS4, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

48. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

49. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013780 (Piscirickettsia salmonis strain PM51819A plasmid p2PS5, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

50. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038915 (Piscirickettsia salmonis strain Psal-010a plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

51. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039206 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

52. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050939 (Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p1, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

53. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038934 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

54. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039221 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

55. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038974 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

56. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012417 (Piscirickettsia salmonis strain PM15972A1 plasmid pPSA1-4, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

57. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038888 (Piscirickettsia salmonis strain Psal-004 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

58. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039216 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

59. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038911 (Piscirickettsia salmonis strain Psal-009 plasmid unnamed3, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

60. spacer 4.177|2360226|35|NC_010320|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038878 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.657

cagcaaattctttatcatagtttatatgttcaacg	CRISPR spacer
ttccaaattcttttgcatagtttatatggctttta	Protospacer
.  **********  ************* ..  ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 531917 : 540695 9 Moraxella_phage(16.67%) NA NA
DBSCAN-SWA_2 792866 : 800803 8 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 1240218 : 1355059 112 Erysipelothrix_phage(62.96%) head,coat,portal,holin,capsid,tail,protease,terminase,transposase,tRNA NA
DBSCAN-SWA_4 2262568 : 2348416 55 Bacillus_virus(16.67%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage