CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_011567	Anoxybacillus flavithermus WK1, complete sequence	4 crisprs	Cas14u_CAS-V,c2c9_V-U4,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,DinG,csa3,DEDDh,cas14j,c2c10_CAS-V-U3,RT,cas14k	0	16	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_011567_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011567_1

293815-293988

Orphan

Consensus_repeat	Method
CACTTTTTTGACGTTTGTATCGTACCTATGAGGAATTGAAACT	PILER-CR
ACGTTTGTATCGTACCTATGAGGAATTGAAAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NC_011567_1

>merge|NC_011567|1|293815-293988|PILER-CR,CRISPRCasFinder
TTTTTGGGGTTTTTATCGTACCTATGAGGAATTGAAACTCATCCATCCTTTCTTTTTTGTCTCCTCTATTTTAACGTTTGTATCGTACCTATGAGGAATTGAAACACAAGGAACGTGCCTACGCTCGTTCTCACTTTTATGACGTTTGTATCGTACCTATGAGGAATTGAAACT

>NC_011567|1|1|293815-293988|PILER-CR
TTTTTGGGGTTTTTATCGTACCTATGAGGAATTGAAACTCATC	CATCCTTTCTTTTTTGTCTCCTCT
ATTTTAACGTTTGTATCGTACCTATGAGGAATTGAAACACAAG	GAACGTGCCTACGCTCGTTCTCACT
TTTATGACGTTTGTATCGTACCTATGAGGAATTGAAACT

>NC_011567|1|1|293821-293987|CRISPRCasFinder
GGGTTTTTATCGTACCTATGAGGAATTGAAAC	TCATCCATCCTTTCTTTTTTGTCTCCTCTATTTTA
ACGTTTGTATCGTACCTATGAGGAATTGAAAC	ACAAGGAACGTGCCTACGCTCGTTCTCACTTTTATG
ACGTTTGTATCGTACCTATGAGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011567.1\|WP_041637693.1\|289638_289950_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NC_011567.1\|WP_012573992.1\|302494_303844_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143454
NC_011567.1\|WP_012573996.1\|307737_308037_+\|cytochrome-aa3-quinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|200218
NC_011567.1\|WP_041639241.1\|297134_301271_+\|TIGR02680-family-protein	unknown	unknown	gnl\|CDD\|274256
NC_011567.1\|WP_041637685.1\|283221_283512_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NC_011567.1\|WP_041637691.1\|287552_287807_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|366125
NC_011567.1\|WP_012573989.1\|295978_297145_+\|TIGR02678-family-protein	unknown	unknown	gnl\|CDD\|378234
NC_011567.1\|WP_012573997.1\|308138_309647_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NC_011567.1\|WP_012573978.1\|280949_282662_-\|adenine-deaminase	unknown	unknown	gnl\|CDD\|223933
NC_011567.1\|WP_012573995.1\|307131_307737_+\|cytochrome-aa3-quinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|239214
NC_011567.1\|WP_041637708.1\|305165_307142_+\|cytochrome-aa3-quinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131928
NC_011567.1\|WP_041637687.1\|284996_286427_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NC_011567.1\|WP_041637701.1\|294483_295965_+\|TIGR02677-family-protein	unknown	unknown	gnl\|CDD\|378233
NC_011567.1\|WP_041637704.1\|301254_302490_+\|TIGR02679-family-protein	unknown	unknown	gnl\|CDD\|274255
NC_011567.1\|WP_041637689.1\|286443_287019_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NC_011567.1\|WP_012573984.1\|288953_289649_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NC_011567.1\|WP_012573980.1\|283524_284982_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NC_011567.1\|WP_012573986.1\|292596_293031_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_011567.1\|WP_080513050.1\|304204_305176_+\|cytochrome-aa3-quinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|273621
NC_011567.1\|WP_012573983.1\|287952_288441_+\|SagB-family-peptide-dehydrogenase	unknown	unknown	gnl\|CDD\|275304

Protein	Function_ID	Function_description	E-value
NC_011567.1\|WP_041637693.1\|289638_289950_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	2.53212e-11
NC_011567.1\|WP_012573992.1\|302494_303844_+\|aldehyde-dehydrogenase	gnl\|CDD\|143454	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.	0
NC_011567.1\|WP_012573996.1\|307737_308037_+\|cytochrome-aa3-quinol-oxidase-subunit-IV	gnl\|CDD\|200218	TIGR02901, cytochrome_aa3_quinol_oxidase_subunit_IV, cytochrome aa3 quinol oxidase, subunit IV. This family (QoxD) encodes subunit IV of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	2.15193e-25
NC_011567.1\|WP_041639241.1\|297134_301271_+\|TIGR02680-family-protein	gnl\|CDD\|274256	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length. [Hypothetical proteins, Conserved].	0
NC_011567.1\|WP_041637685.1\|283221_283512_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	1.00047e-41
NC_011567.1\|WP_041637691.1\|287552_287807_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|366125	pfam00486, Trans_reg_C, Transcriptional regulatory protein, C terminal.	5.73338e-05
NC_011567.1\|WP_012573989.1\|295978_297145_+\|TIGR02678-family-protein	gnl\|CDD\|378234	pfam09661, DUF2398, Protein of unknown function (DUF2398). Proteins in this entry are encoded within a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria including: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria).	3.48597e-137
NC_011567.1\|WP_012573997.1\|308138_309647_+\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.67811e-70
NC_011567.1\|WP_012573978.1\|280949_282662_-\|adenine-deaminase	gnl\|CDD\|223933	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism].	0
NC_011567.1\|WP_012573995.1\|307131_307737_+\|cytochrome-aa3-quinol-oxidase-subunit-III	gnl\|CDD\|239214	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Ubiquinol oxidases feature four subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of bovine CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in bovine CcO. Although not required for catalytic activity, subunit III appears to be involved in assembly of the multimer complex.	2.42541e-87
NC_011567.1\|WP_041637708.1\|305165_307142_+\|cytochrome-aa3-quinol-oxidase-subunit-I	gnl\|CDD\|131928	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I. This family (QoxB) encodes subunit I of the aa3-type quinone oxidase, one of several bacterial terminal oxidases. This complex couples oxidation of reduced quinones with the reduction of molecular oxygen to water and the pumping of protons to form a proton gradient utilized for ATP production. aa3-type oxidases contain two heme a cofactors as well as copper atoms in the active site. [Energy metabolism, Electron transport].	0
NC_011567.1\|WP_041637687.1\|284996_286427_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NC_011567.1\|WP_041637701.1\|294483_295965_+\|TIGR02677-family-protein	gnl\|CDD\|378233	pfam09660, DUF2397, Protein of unknown function (DUF2397). Proteins in this entry are encoded within a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria including: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria).	0
NC_011567.1\|WP_041637704.1\|301254_302490_+\|TIGR02679-family-protein	gnl\|CDD\|274255	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein. Members of this protein belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). [Hypothetical proteins, Conserved].	2.99339e-97
NC_011567.1\|WP_041637689.1\|286443_287019_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	2.84744e-46
NC_011567.1\|WP_012573984.1\|288953_289649_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	5.06466e-44
NC_011567.1\|WP_012573980.1\|283524_284982_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NC_011567.1\|WP_012573986.1\|292596_293031_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	4.26859e-17
NC_011567.1\|WP_080513050.1\|304204_305176_+\|cytochrome-aa3-quinol-oxidase-subunit-II	gnl\|CDD\|273621	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II. This enzyme catalyzes the oxidation of quinol with the concomitant reduction of molecular oxygen to water. This acts as the terminal electron acceptor in the respiratory chain. This subunit contains two transmembrane helices and a large external domain responsible for the binding and oxidation of quinol. QuoX is (presently) only found in gram positive bacteria of the Bacillus/Staphylococcus group. Like CyoA, the ubiquinol oxidase found in proteobacteria, the residues responsible for the ligation of Cu(a) and cytochrome c (found in the related cyt. c oxidases) are absent. Unlike CyoA, QoxA is in complex with a subunit I which contains cytochromes a similar to the cyt. c oxidases (as opposed to cytochromes b). [Energy metabolism, Electron transport].	3.03941e-99
NC_011567.1\|WP_012573983.1\|287952_288441_+\|SagB-family-peptide-dehydrogenase	gnl\|CDD\|275304	TIGR04511, SagB_rel_DH_2, putative peptide maturation dehydrogenase. Members resemble the peptide maturation dehydrogenase SagB of thiazole and oxazole modification systems, and occur in a what appears to be a new type of peptide modification system. One adjacent marker is a new type of nitrile hydratase alpha subunit-related putative precursor, TIGR04509, distantly related the NHLP leader peptide family TIGR03793. Another is a large protein, TIGR04510, with regions similar to adenylate cyclases and TPR proteins.	4.19343e-38

>NC_011567.1|WP_012573986.1|292596_293031_+|class-I-SAM-dependent-methyltransferase
MDLNNYWDLQPDESKKWQENRYKQFGFVWGDEPGPTAKMAARLFAEKGCKNILVAGCGYGRECVYFHEKGFKVTGIELSEEGIKLAKHWSQEKKLDIDFYVDSVLDMKHPNDGYDAVFLHKVFHQFRYEDRKKNDQRVSSSSKR
>NC_011567.1|WP_041637693.1|289638_289950_+|AzlD-domain-containing-protein
MWTNWILIGLLAITTYISRIIGIEVMKGRKTSSTLRLYFNYVPAGILSALVVSQLFISKDSQIQISFPIVIGGLVTALTIKISKSFLPSVIVGIVSGLLIRKL
>NC_011567.1|WP_012573984.1|288953_289649_+|AzlC-family-ABC-transporter-permease
MNMTIRTIRTGISEALPLAIAIAAYGLSYGVLGIQAGFGLVGTVLMSLLVFSGSVQMVTVAMITGGAGILSILVTATLLNLRNLLYGAALAEGIAPAKRWRWLLSFGVSDEPFVLGISRFKKYGPDPIYFATVAGTFYIAWVSSSLIGAIIGNQIIDPQKWGLDLAFPITFVALLVPNLTEKPIITTALTGAVITVILTVLFPGTPLNILVAGVLAPLVGIYLKEKNKNVD
>NC_011567.1|WP_012573983.1|287952_288441_+|SagB-family-peptide-dehydrogenase
MRKASASGGGLHPEEAYVIALRVDGLIPGLYHYRVQDHKLTLLTEGKFEEKLIELLYHQYFARGLSVGIFITARFDKAWWKYRHSCAYRNVLLDIGHASQTFQLCPTSLGYQTWITGAFQDIEVDSFLGVNGSIEGTIFFVGAGTGELKAIDELTLRHLASR
>NC_011567.1|WP_041637691.1|287552_287807_+|winged-helix-turn-helix-domain-containing-protein
MEVVLYSRSYNQASLIKLLFKNSGCRFTADELIDYIDLTGHSSLYFPIKNLREKIEEDPSHPVALTHRRGYGYGICTQEITKGE
>NC_011567.1|WP_041637689.1|286443_287019_-|Uma2-family-endonuclease
MSLPNKKRLWTYADYANLHEEKRYEGIDGALFMTPSPTPRHQRIVTALSALFFDFLQHSSCEVFVSPIDVCLFATKDTPLHDIKDWYIPDLIVVCDKQKIGDERIYGAPDLIVEILSPSTAKHDRITKFHNYERAGVKEYWIVDPIHETVEIYALQDGQFRQVHMHYKDETICPYIFPSCFIALPKVFTPM
>NC_011567.1|WP_041637687.1|284996_286427_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNFEIVIGLEVHVELKTKSKIFSSSPNAFGAPPNTQTSVIDLGYPGVLPVLNKQAVEYAMKAAMALNCEIATETKFDRKNYFYPDNPKAYQISQYDQPIGQNGWIEIEVNGKKKKIGITRIHLEEDAGKLTHTGDGYSLVDFNRQGTPLIEIVSEPDIRSPEEAYAYLEKLKSIIQYTGVSDCKMEEGSLRCDANISLRPIGSDKFGTKTELKNLNSFNFVRQGLEYEAKRQEKILLSGGVIQQETRRFDEATKTTILMRTKEGSEDYRYFPEPDLVMLYIDEEWKERVRASIPELPDARKKRYIEELGLPEYDAKVLTLTKEMADFFEATVANGADPKLASNWLMVEVSAYLNAEQKELHDIALTPESLAGMIKLIQNGTISSKIAKKIFKELVEKGGDPEQIVKDQGLVQISDEATLRKIVLEVLDANPQSIEDFKNGKDRAIGFLVGQIMKATKGQANPPLVNKLLLEEINKR
>NC_011567.1|WP_012573980.1|283524_284982_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSLFDYRVSELHSLLHKKEISVSDLVDESFKRIHEVDEKVQAFLTLNEEQARAKAKELDEKLATEKEFGLLFGMPIGIKDNIVTKGLRTTCASKILYNFDPIYDATVVERLNEADAVTVGKLNMDEFAMGSSTENSGFQLTRNPWDLERVPGGSSGGSAAAVAAGEVPFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLVAFASSLDQIGPITRTVEDNAYLLQVISGLDPMDSTSANVDVPDYVSALTGDIQGLKIAVPKEYLGEGVSEEVRQSVLDALKVLEGLGATWEEVSLPHSKYALATYYLLASSEASANLARFDGVRYGYRTDHAKNLMEMYKQTRSEGFGNEVKRRIMLGTFALSSGYYDAYYKKAQKVRTLIKQDFENVFEKYDVIIGPTTPTPAFKIGEKTSDPLTMYANDILTIPVNLAGVPGISIPCGFVNGLPVGLQIIGKHFDESTIYRVAHAFEQATDYHKQKPTL
>NC_011567.1|WP_041637685.1|283221_283512_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MSRISIEQVKHVAHLARLAITEEEATMFAKQLDAIITFAEQLNELDTENVPPTSHVLNMKNVMREDVPTAGLPLEDVLKNAPDHRDGQFRVPAILE
>NC_011567.1|WP_012573978.1|280949_282662_-|adenine-deaminase
MKQLAVAAKKQLADVIVKNGKIVNVFTHDIIEGDIAIADGKIVGIGEYDGQTVIDAKGKYVCPGLIDGHVHIESSMVTPSEFARVVVPHGVTTVITDPHEIANVAGTKGIEFMLNDSDHIPLDVYVMLPSCVPATDFEHAGATLHAEQLTPFFSHPRVLGLAEVMDYPSLLEGKQPMLAKLAAAMEANKLIDGHLAGLDETAVNVYRSANVHTDHECVTVHEALARVQRGMYVLIREGSVAKDLNKLLPAVNTYNARRFLFCTDDKHIDELVTEGSIDHHIRLTIQAGMNPLTAIQMATLNAAECYRLYTKGAIAPGYDADFLLVEDLQSFSITNVYKKGVLVAENGRATFSVTKATAIDQTIAQSVHTKKVTKEDVQIPFTREKQANVIQIIPNHLHTKRLMTEVDVEHGVFQPSVERDLLKLVVVERHRGLGVGVGIVNGFQLKKGAIASSIAHDSHNIIATGTNDNDIIVAIEHIKHINGGLAVVESGRVLADLPLEISGLMTAKRFEDVLERLQKIHDALITIGASDEFNPFITLAFLALPVIPELKLTDQGLFDVSSFQFIDVEV
>NC_011567.1|WP_041637701.1|294483_295965_+|TIGR02677-family-protein
MDTSWLKPITEAKYLVVDNAYRYRAILRYFYTQHERMRQYLFPEEVYAFLKQFDEFQDYTEEELQQDLEQLVKWKNLIARQETGHIRTIEEFKKKRFRYQCSPYTVEIERMIRTLEQLGDTFGGSLEKTRFDRLYASLVRMEAIIHAGFVEKREEMNQVWEETFDYFRKIIQNSADYIAYLNGENMEERMMSDSFLVYKEQFTAYLRDFIVALQKTSMQIEKLLEDLPADGVRRFIEEVVAYQLAIPRFEGAVLSREQLTEEKLDTWRSLKEWFLGRNGHESELSFLQKQTNEAIRRMTRVVQRLGERHHHFRSRKKDYLHLAKWFSSLETVEEAHKLSAVVFGCFHTKHIVAENDATENMYRDIWEEQPTEWLVKPRVRHYREKKKPEAMTDRRKEKEEAMTAYLAAKQQEEEALAQLITDGKIVLQELPVVASHIRKTLLGWIAKAMGREDRIVQTENGWKVKVVQREGTITLKAEDGMLMMPNYEIHLLD
>NC_011567.1|WP_012573989.1|295978_297145_+|TIGR02678-family-protein
MEKEFDEKAKEALTALFEHFWIVREKEPELFQKIREREKVLKRYVQEKFGYRLIVHRYFAKLEKIPAEPEAWMGIESFQEPLDYALFCCLLAYLEGKAVEEKFLLSDVCEEIKAMYPGETVLDWTNYQHRRALIRVLKTAEQIGIVHHVDGELEAFANQEDEEALYEVPVLSRYFMRSYPKDFIQYETMEQLLEEEWKVSPDDYRRHSIYRQLFLSPVVYRRQKDDPNFYYLRNFRHRLRDDIEAHTDFRYELYKNAALLTIPERQHVYTLFPDQKGTSDMILHLAAVVRAHLDKYPPDEYGQIHVTMSDFHQLLNHCMEQYGEGWSKTYREMTTAQLASELLSALKAWKMAEHEQETGMVTLYPLLGRLVGRYPDDFTMKGRDDDDE
>NC_011567.1|WP_041639241.1|297134_301271_+|TIGR02680-family-protein
MTNKWVLHRAGLINFWYYDEQYFEFADGKLLLRGTNGSGKSVTMQSLLPVLLDGKKTPDRLDPFGSRARRMEDYLLGEKEIVDRDERTGYLFLEYKRKQTEQYVTTGIGLRAKRQKNMDFWGFVIFDNRRIGHDLFLYKTEKSANGTEKIPLTKRELTNLLGNGGTVVDSQKEYMELVNKHVFRFESMEAFQELIELLIQLRSPKLSKDFKPTVIYEILESSLPALTDDELRHLSETIENMDQTKQQLEQLERDEQSLKRLCTQYRAYNEYMIAEKASEWLKADKQVKRLAEEEKQWIAEKAEKQTHLVDLNEYIQTLASEQDVLHQRELELASHEVFQAAKEYERVQQEIRDIHEKQQKLLRQIDEKEQLERRYKRQLEEDEDRRYQVEKQLAQQLEDLRHDAMESSFSAHDLNEADFSRQRQTKFDFTVWKREGQEYVEKLEQIIALWRRHDEKKARYEETSKEVGDLQREVDGLRHEEAKWLELLENEKSRFQQEVFRWLEQCQDVSVQEASVQLFLQRLHELYETYHVDEMKQPFAEAYYDALNRKNEEKMKQKHACTLLEEKIAAKEAEWSQWKTQKDPELARDEQTMAARAELDEKGIAFVPFYAGVEFQDHVPEPLRERIESALYHAGLLDALITETNVDIKCDRVIVPRPVELAHTLADYLQPDVEEGCKVSTTRIKEVLQSIVFADGAMEGTFTLNEEGHYTLGVVKGHAPTREKALFIGRAARKRWRLEKIAALEAELLELRAQLHKQTDMLKQLEQTIAQINSWFRAFPTDRDMRAAFEEWEKTKRYIISKQQERERKNEKLAQLARDWQQAKQTLREQTEGLDLEFSKDGYEQALLLMKSYMRRLHELQMTHREFLHLLDMIHHRTEQLETLQQEIDETKGERYVLAKEQQKIELKRQEIERTLQLMGAEEIQAEIQRVRDRLAFLQREIPAKMNERIALEHALKTIREKCAQLSVKEAFAKRLAAAWKQSFEREVALELVELHGADLLEKAKEAMQRYGALAKETRTSLVNRLNSIFFQESASLTEYRLSQEPVAIEGTNPFADIELDEEMELKVAGWREKQDRIVLLLDYKGQRVSPFYVLHEIEHDIFLQREYMKEQDRELYEEIILKTIGRILRSRIQRAERWVKDMNERMQQLDTSSGLVLFIQWKPRTAETEEEMDTKELVELLRMNSRLLKDEDLQRVTKHFRSKINRARELLEERGQGNTLHQIIKEVLDYRKWFSFTLYYQKTNEPKRELTNQRFYQFSGGEKAMAMYIPLFAATYSRYQEAADDAPYIISLDEAFAGVDENNIRNMFGLVEQLGFNYVMNSQALWGDYDTVPALSICELVRPKNASFVTVIRYYWNGKVKQLITEARKDELIEPVR
>NC_011567.1|WP_041637704.1|301254_302490_+|TIGR02679-family-protein
MNRLDEAVQFFRGERSFHRLFCEMKKKYESLGRVGGTISVTSFSAEEKEAIASFFGKEMSRVSLAAFEQQLGNTKFAGISLVELLACYFGEPLVTKKEQQQEIAREKEAYFARLMNTYRAPRDWLVAVENQRFVQLAYQQNPQALETAISIVCRALEQLPSTYVRLPVFAQQVANDPHALDLHTLAGKLLLSALQFYAEKEYDLSSVEDVNELLQSYRLLREDVLNFVTCAGVLADTDKGRHPVFVAACETNTALNVPLREVMPLVRAYPYLGSVIFVVENAGVFSTLLEANVPLVSTNGQLNLATIWLLDLLVKEGTTLYYSGDFDPEGLKMAQRLVDRYGSSVRLWHYDKFDYLATNPTVPLSGERLAKLQSVTLRDLQPVKQEMIRQKKAGYQEAIVEELKRDTYLGG
>NC_011567.1|WP_012573992.1|302494_303844_+|aldehyde-dehydrogenase
MNDHLQKQKRYFRTGATLSLSFRLAQLARLKETIQVHEQAIIDTLAKELNKSPLEAYTTEIGVVYEEINFITKRLARWMKPKRVPTPLTHLGSKSYVYPEPYGVSLIIAPWNYPFQLAISPLIGAIAAGNCAVVKPSEYTPAMSALLKTIVSEAFPEEYITVVEGGADVSQQLLNLRFDHIFFTGSVPVGKIVMAAAAKHLTPVTLELGGKSPVIVDSSAHLELAAKRIVWGKFLNAGQTCIAPDYVLVHEAIKQPLLEKMKRYIDELYGNRDAYGRIVSKRHAERLVRFLTNGTIVHGGNYDIEQRWMEPTLIDDVTWDDAIMQEEIFGPLLPILTFQTMEEAIRTVQDHEKPLALYLFAEDEHVQRQVLAQVSFGGGCINDTIMHIANPHLPFGGVGQSGIGAYHGKASFDAFSHDKSVVKQTTAFDIPIRYPNFPNAIKWVRKLLK
>NC_011567.1|WP_080513050.1|304204_305176_+|cytochrome-aa3-quinol-oxidase-subunit-II
MKRLFSLLVVGLLPLLAGCEMVVFQPQGPAARSITELINWSIGWMLLVVVVVFALFAYIVWKYRDRPERQGEEPPEEHGSTVLEIVWTVIPILVVIALTIPTVKTLYDLEKPPKGYEDEKPLVIHVTSADWKWIFSYPEQNIETVNYVNIPAGRLVLFKMTSASTMQSFWVPALAGQKYTMNKMETELYVVADRPGSYEGRNTNFNGRGYAHMQFEVLAQTPKEFDKWVQEVKQMAPKLTKEKYEQLLLPTHLGRLTFVDTHLQWVNHADPHSKTYTNPELYRGHGYQGKIFIREDNYKSSSICNDEQQKALESDSGGEHHGH
>NC_011567.1|WP_041637708.1|305165_307142_+|cytochrome-aa3-quinol-oxidase-subunit-I
MGIKWNEIFVGGDPLLVGSQIAIVLTVVAIVVGLTYFKKWGWLWREWLTTVDHKKIGIMYILSGVLMFFRGGMDGLLMKAQTARPEMKFLDAQHYNEIFTTHGVIMILFMAMPFLIGLMNVVVPLQIGARDVAFPQLNALSFWLFFSGAMLFNISFVVGGSPDAGWTSYFPLAGKEFSPGIGNNYYAIALQIAGLGTLMTGINFIVTILKMRAPGMTLMKMPMFTWTTLITSIIIVAAFPIFTVALALMTFDRLYGTHFFTLSSGGSDMLWANLFWLWGHPEVYIVILPAFGIFSEVIATFSRKTLYGYTSMVISIVGIAFLSMIVWVHHFYTMDAGPAVNSFFSITTMLIAVPTGVKMFNWLFTMRKGRIQFTTAMLWALAFVPNFVIGGVTGVMLAMAAADYQYHNTLFLVAHFHYVLIPGVVFAVFAGLYYWWPKMFGFMLNEKLGKYHFWLFTIGFNVTFMPMFFLGLKGAVRRAYTYSAESGFAPLFLVSAIGSIILAIGFAVFCYNIYWSFRYAKRDVSHDPWDARTLEWMTASPVQFYNFAVVPEVKQLDAFWHMKKRGETLTLKGSDIKKIHMPSNSGLPFYMAVVFGITGFFLVFEAHIAAAIAAIGIVIGLIIRSFDYNDGYYVSVDEIKQTERTWRTVEGGTENHVG
>NC_011567.1|WP_012573995.1|307131_307737_+|cytochrome-aa3-quinol-oxidase-subunit-III
MSANVNHSLPLEYQTEQNRLNILGFWIFLGAEIVLFATLFAVYGVLGHRYAGGPTPSDIFKLNDVLIETLLLLTSSFTCGLAVFFMRQRDMKKLLVWLIITLLLGAGFLFMEIREFIHYVHEGATMQTSAFLSSFFVLLGTHGAHVTFGIIWAVMLIIQLLQRGLTPMTARKMFIISLYWHFLDVVWIFIFTFVYLKGMVG
>NC_011567.1|WP_012573996.1|307737_308037_+|cytochrome-aa3-quinol-oxidase-subunit-IV
MEHKSKYPVSHVVGFLFSLILTFVAVFVALKMNVSYTIVMWIIGSLAVIQAGLQLFMFMHVTEGEDGKTNVINMAYAVFVAIVIVAGSIWVLTSGHAAH
>NC_011567.1|WP_012573997.1|308138_309647_+|HD-domain-containing-protein
MRIYEETLKKLFINYTIGSVLAVVGVGSTLMVMALNIRQVDLLMLLLIQFFSFCMMLFIEYRAFQKDIHPIRRIFYETNVTEEQFYWALVQAKRFPLLTVRRIALPHFLGLSVPAVALTLSLIFIDVLRIPYMYVAYALFGALLIAMLHAMIEFFLTLRTMRPLIRDMMQIGRMHRFHEAIRATNVVYVPLKIKIGLSVLFIGIFPVLLFVLATEVKLFAEGQNTFSGYWTWTIVVLVISVLFSLFAARVLSEDVERSIEDLLQYMSRVQRKEYELMCDNVYIDEFSELTNGFNHMVDAIVERDEKNKQLLNSFISVMTTALDARDEYTAGHSQRVAVYAVEIGKRLGMTNEQLARLYRSAILHDIGKIGIPDHILLKDGKLTDEEFAWIKKHPALGENIIRQVQPIEEVKDLLPGIRSHHERIDGKGYPDGLEGEDIPLFGRIIAVADAFDAMTSDRPYRKGMHVEKAVSILLEGRGTQWDAQMVDCFISFLKEREQEKVS

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Crispr_ID: NC_011567_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011567_2

804177-809818

Unclear

I-A

Consensus_repeat	Method
GTTTTATCTGAACGTAGTGGGATGTAAAG	PILER-CR
GTTTTATCTGAACGTAGTGGGATGTAAAG	CRISPRCasFinder
GTTTTATCTGAACGTAGTGGGATGTAAAG	CRT

85 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NC_011567_2

>merge|NC_011567|2|804177-809818|PILER-CR,CRISPRCasFinder,CRT
GTTTTATCTGAACGTAGTGGGATGTAAAGACACATGATGATATAGTCAAGCTGCTCGCGAATATGTTTTATCTGAACGTAGTGGGATGTAAAGCTTGATCGTGAACGGCCGAAAGTTCTTATTGTTGATGAGTTTTATCTGAACGTAGTGGGATGTAAAGTTGTTCAAAGTTGCGAAGTAGAAAAGACAAGAATATCGTTTTATCTGAACGTAGTGGGATGTAAAGAGCGAAAAAGAAGGAAGAAATTATTGTAGCACTCAATGTTTTATCTGAACGTAGTGGGATGTAAAGTTGCTCTTTCTGCACTCATTTATTCTTAGTTTTCCGTTTTATCTGAACGTAGTGGGATGTAAAGATCAGATCACTAGCAGCAACAGTAATATTAGTAGTAGAGTTTTATCTGAACGTAGTGGGATGTAAAGCTCCTTCGCGGTTTGTAAGAACACTTGAGACTTTTCCCGTTTTATCTGAACGTAGTGGGATGTAAAGTGCCAGATAAGTCGGTCGCGAGTAGTTGCGGAGCAGGGTTTTATCTGAACGTAGTGGGATGTAAAGCATATCTGGTCCGCTTGGTCCACGTCGTTTGTTTCGGTTTTATCTGAACGTAGTGGGATGTAAAGTTCATAAGCACACTCGATCATTTCAAACACTTTTTCGGTTTTATCTGAACGTAGTGGGATGTAAAGATTGATAAATTGTGTTTAAACGGATGTAAACAAAAAGTGTTTTATCTGAACGTAGTGGGATGTAAAGTGAGATTGCAAAACGTCCTGGAATCAAATCCGCTTTGTTTTATCTGAACGTAGTGGGATGTAAAGATCTTCGGCATTTTGAAGTTTTTAACCGTGCTAACAGTTTTATCTGAACGTAGTGGGATGTAAAGTTGAAACACAGGTGTTTTTTCTGACTTACCGCCAAGTTTTATCTGAACGTAGTGGGATGTAAAGATTGCATTTTTGACATGATACATCATCAAAACTACGTTTTATCTGAACGTAGTGGGATGTAAAGCGCACCGCCATGTTTCATCCGCCCAAGCGCCTCTCTAGTTTTATCTGAACGTAGTGGGATGTAAAGCCTCATGTTCTGCTTTGCAATCAGTACACACGGCAAGTTTTATCTGAACGTAGTGGGATGTAAAGCTTTGTTTCCAGCGGAATTCGCTTTTTCAAATACAGGTTTTATCTGAACGTAGTGGGATGTAAAGAGCTTTTCTTTCCCGACATTCACAAAAACTCGCAATCGTTTTATCTGAACGTAGTGGGATGTAAAGTAATCTCTGAAGAAATCCTAGTATTCACTCGAACCAGTTTTATCTGAACGTAGTGGGATGTAAAGTGTTCCTTGAATTTTGCTTCCACTGCTTTTTGAACAGGTTTTATCTGAACGTAGTGGGATGTAAAGGACGTTCCGAATGAAGAAGCCGAATGGCTTCTTCAAGTTTTATCTGAACGTAGTGGGATGTAAAGAAATTGATGGATGAAGCGATGCGTGAAGCCGCTTACGCGTTTTATCTGAACGTAGTGGGATGTAAAGAAATGGAGAGCAAAAAGGAAAATGCAAAGGATTTGGAGTTTTATCTGAACGTAGTGGGATGTAAAGAGAAAACAGCAATGTTGCTTCTCAATCACTTGGTGATAGTTTTATCTGAACGTAGTGGGATGTAAAGTCGTGAAATAAAACAGAAGGCGCTGGCGCCGCGACAGTTTTATCTGAACGTAGTGGGATGTAAAGACAATCTGCCACGTTTTTTTTATGACAGGAACGATGGGTTTTATCTGAACGTAGTGGGATGTAAAGTTGCAACGCATCCGCTCTATTTTTCTCTTTATCCAGTTTTATCTGAACGTAGTGGGATGTAAAGATTTTCGGCATTTTGAAGTTTTTTACAAAGTCTGCAAAGTTTTATCTGAACGTAGTGGGATGTAAAGGCGGTGGAGAAATGAAACTAAAGGACATCGCCGCTCGTTTTATCTGAACGTAGTGGGATGTAAAGGCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAGGTTTTATCTGAACGTAGTGGGATGTAAAGACGATGATTTTGCATTTTTCGCTGTTTCTCTCGGCTCTTGGTTTTATCTGAACGTAGTGGGATGTAAAGAATTCGCGAAGTAAGTTTTGACCTAAACCGATCGTGTGTTTTATCTGAACGTAGTGGGATGTAAAGTATTGACGCTATTTTTTAAAAATTAAACTGATTTCATTGTTTTATCTGAACGTAGTGGGATGTAAAGGCATATTTTTCTGATCCTTCTGCTCGTGCTACTCTGTTGTTTTATCTGAACGTAGTGGGATGTAAAGGCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAGTTTTATCTGAACGTAGTGGGATGTAAAGAGGATTGAAACGAACGTGTAGCACGGCTAGCACGTTGAGTTTTATCTGAACGTAGTGGGATGTAAAGTTGCTTTAACTTGTTGTTCAAACGGCAAGTCCTTAAGTTTTATCTGAACGTAGTGGGATGTAAAGTGTTTTAACCTCATCTTTTTTCCCTTCCTCTTTCGCGTTTTATCTGAACGTAGTGGGATGTAAAGCTCTAATATGGGGATACATGTTGAAATGTCTGGTCAAGGTTTTATCTGAACGTAGTGGGATGTAAAGTACGATTTCGAAAATGAAAACGGTGAACGCGTAAGTTTTATCTGAACGTAGTGGGATGTAAAGACGCTACTCAAGCCTGGTGCAGAAAAGATTCAGATGTTGGTTTTATCTGAACGTAGTGGGATGTAAAGATTTGTCGATAAAGTTGTTGACTTCAAATATTTAGAACGTTTTATCTGAACGTAGTGGGATGTAAAGAAAGGGTCAATATCAATAAAATCTGCTTCATCTACGGTTTTATCTGAACGTAGTGGGATGTAAAGTAAGCAAAAGGTTTATGCTCATGTCGTTAGCTATCTCTAGTTTTATCTGAACGTAGTGGGATGTAAAGCGATAAAGCCATGTCCAATGTCGCGACGACCTCATCAGGTTTTATCTGAACGTAGTGGGATGTAAAGTCGCTTCAAAAATACCCGCTAATTGAAAATTTTCTTCTGGTTTTATCTGAACGTAGTGGGATGTAAAGTGAAGAATTCGCAGACTGTTTGCATTTCATCTTGTCGAGTTTTATCTGAACGTAGTGGGATGTAAAGGGTTTTGACCTCATCTTTTTTCCCTTCCTCTTTCGTTTTATCTGAACGTAGTGGGATGTAAAGCCCAGTGATCAAGGCACGTTCGCTTCGCTCACTTAACGTTTTATCTGAACGTAGTGGGATGTAAAGTACATAGACGTCATGAGGAAGAACAGAGTAGTCGCGGTTTTATCTGAACGTAGTGGGATGTAAAGTTCAGAATGAAGAAGCCTTATAGCTTCTTCAACAAGTTTTATCTGAACGTAGTGGGATGTAAAGGATCAATTTTTCAGACGGTATGAAAAAGAAGGGGTACGCGTTTTATCTGAACGTAGTGGGATGTAAAGGTGGGTCGGAAAGGAAAGCGGAGGGAAGGACTTGAATGGTTTTATCTGAACGTAGTGGGATGTAAAGGACGAGTTTTTGATGGGTTCGAACGGTGTCGTTTTGGTTTTATCTGAACGTAGTGGGATGTAAAGTTGCAACACGTCCGCCCTATTCTTCTCACGTGTCGCGTTTTATCTGAACGTAGTGGGATGTAAAGAACCGAGTCGTCTCGTTCTCGCTAACCGAGTCGGCGTTTTATCTGAACGTAGTGGGATGTAAAGCAGTCGCTGTTCAGGCTTGACGTAATCCGCTGGCGCGTTTTATCTGAACGTAGTGGGATGTAAAGTACAGTCGAAGTTCGAGCTTACAGGCGACGCGGGAGGCGTTTTATCTGAACGTAGTGGGATGTAAAGTGGGAAACGGTGTTTGTGGAAGATGGCAACGAAATTACGGTTTTATCTGAACGTAGTGGGATGTAAAGAACAAAAGCTAGTTGAAGAACGTAGGGAGTATCTGAGTTTTATCTGAACGTAGTGGGATGTAAAGCCGTATTGGCTGAAAGACAATCAAGTGATATGTATGATCCGTTTTATCTGAACGTAGTGGGATGTAAAGTTCAGATTCTACTTCTACCCGTTCGGTCATTCGTAGTTTTATCTGAACGTAGTGGGATGTAAAGTTCTTAATTTCATATGGTGCTCGACGTTTCTTTGATATGAGTTTTATCTGAACGTAGTGGGATGTAAAGCAAAAGATTCAAATATGATTGAGAGCACGCTTTTAACTGTGTTTTATCTGAACGTAGTGGGATGTAAAGCGTTGCCGATCGTTTCAGCATATAAACGCTGTATAGCTTGTTTTATCTGAACGTAGTGGGATGTAAAGAAGATGTATAGCGATGATAAAACGCATGACCTAATATGCCGGTTTTATCTGAACGTAGTGGGATGTAAAGCAATGATGTCATCAATAGCATTAGAAACAATCATCCGAGTTTTATCTGAACGTAGTGGGATGTAAAGATCACCCACATTTTCACGTTTTACTTGGCGTTAAACCGTTTTATCTGAACGTAGTGGGATGTAAAGGTCTGTGATGTCCGTATTGTTCGTAATAAGCGGAATAGTTTTATCTGAACGTAGTGGGATGTAAAGATCGCAAAACGGGCCGTTTGGGATCAGCATTCAAAAGTTTTATCTGAACGTAGTGGGATGTAAAGCGAGAGAGGCGGAAGAACTTTGGGGATTGGCACAAAACGTTTTATCTGAACGTAGTGGGATGTAAAGTACAAGCTCAGCATCGTTACATACAACAAGAAACACGTTTTATCTGAACGTAGTGGGATGTAAAGATGACAAAACCAGAAAAGAAATTCACATACCTTGCGTTTTATCTGAACGTAGTGGGATGTAAAGTTCAAGAACGGGAAAACAGGTCAATCGGAAGTGCAGTTTAGTTTTATCTGAACGTAGTGGGATGTAAAGCAACAAAACGATAGAAACGCAACACTTCCGCGTCAAGGTTTTATCTGAACGTAGTGGGATGTAAAGTAAAAAGGAGTGACAACATGAGTATTTTCCGTGTTGAGAGTTTTATCTGAACGTAGTGGGATGTAAAGTTGGTTTTGCTTTACGCATTATTAGCTTCATTCATAAGTTTTATCTGAACGTAGTGGGATGTAAAGTCAATAACAAACACATCGCCAGCTTGCACGTTAAGTTTTATCTGAACGTAGTGGGATGTAAAGATGGATTGACGACATTGGGGAAGAACTTGTGATTGAGTTTTATCTGAACGTAGTGGGATGTAAAGTCAAATGGATCAGTCATCGGTTCTTGTTGTGGTTGTGTTTTATCTGAACGTAGTGGGATGTAAAGGACATATACGAAACAATGGAATTAACGCAACAACGATATAGTTTTATCTGAACGTAGTGGGATGTAAAGTTAATACCTTCCATCGTTCCTGTCATTCAAAAAACATGTTTTATCTGAACGTAGTGGGATGTAAAGGTATTTAGTGTAGTATTCATTCAGTTCCTGCATGTGTGTTTTATCTGAACGTAGTGGGATGTAAAGATAAACAAAAACCACCGCCTCAGCTTATTCGCTTGGTTTTATCTGAACGTAGTGGGATGTAAAG

>NC_011567|2|2|804177-809818|PILER-CR
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACACATGATGATATAGTCAAGCTGCTCGCGAATAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGATCGTGAACGGCCGAAAGTTCTTATTGTTGATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGTTCAAAGTTGCGAAGTAGAAAAGACAAGAATATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCGAAAAAGAAGGAAGAAATTATTGTAGCACTCAAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTCTTTCTGCACTCATTTATTCTTAGTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCAGATCACTAGCAGCAACAGTAATATTAGTAGTAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCCTTCGCGGTTTGTAAGAACACTTGAGACTTTTCCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGCCAGATAAGTCGGTCGCGAGTAGTTGCGGAGCAGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CATATCTGGTCCGCTTGGTCCACGTCGTTTGTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCATAAGCACACTCGATCATTTCAAACACTTTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGATAAATTGTGTTTAAACGGATGTAAACAAAAAGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAGATTGCAAAACGTCCTGGAATCAAATCCGCTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCTTCGGCATTTTGAAGTTTTTAACCGTGCTAACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGAAACACAGGTGTTTTTTCTGACTTACCGCCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGCATTTTTGACATGATACATCATCAAAACTAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCACCGCCATGTTTCATCCGCCCAAGCGCCTCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCTCATGTTCTGCTTTGCAATCAGTACACACGGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTTGTTTCCAGCGGAATTCGCTTTTTCAAATACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCTTTTCTTTCCCGACATTCACAAAAACTCGCAATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATCTCTGAAGAAATCCTAGTATTCACTCGAACCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCCTTGAATTTTGCTTCCACTGCTTTTTGAACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGTTCCGAATGAAGAAGCCGAATGGCTTCTTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATTGATGGATGAAGCGATGCGTGAAGCCGCTTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATGGAGAGCAAAAAGGAAAATGCAAAGGATTTGGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAAACAGCAATGTTGCTTCTCAATCACTTGGTGATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGTGAAATAAAACAGAAGGCGCTGGCGCCGCGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACAATCTGCCACGTTTTTTTTATGACAGGAACGATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACGCATCCGCTCTATTTTTCTCTTTATCCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTTCGGCATTTTGAAGTTTTTTACAAAGTCTGCAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCGGTGGAGAAATGAAACTAAAGGACATCGCCGCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGATGATTTTGCATTTTTCGCTGTTTCTCTCGGCTCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATTCGCGAAGTAAGTTTTGACCTAAACCGATCGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTGACGCTATTTTTTAAAAATTAAACTGATTTCATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCATATTTTTCTGATCCTTCTGCTCGTGCTACTCTGTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGATTGAAACGAACGTGTAGCACGGCTAGCACGTTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTTTAACTTGTTGTTCAAACGGCAAGTCCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTTAACCTCATCTTTTTTCCCTTCCTCTTTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTAATATGGGGATACATGTTGAAATGTCTGGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACGATTTCGAAAATGAAAACGGTGAACGCGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGCTACTCAAGCCTGGTGCAGAAAAGATTCAGATGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTGTCGATAAAGTTGTTGACTTCAAATATTTAGAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAAGGGTCAATATCAATAAAATCTGCTTCATCTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAGCAAAAGGTTTATGCTCATGTCGTTAGCTATCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGATAAAGCCATGTCCAATGTCGCGACGACCTCATCAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGCTTCAAAAATACCCGCTAATTGAAAATTTTCTTCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAGAATTCGCAGACTGTTTGCATTTCATCTTGTCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGTTTTGACCTCATCTTTTTTCCCTTCCTCTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCCAGTGATCAAGGCACGTTCGCTTCGCTCACTTAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACATAGACGTCATGAGGAAGAACAGAGTAGTCGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGAATGAAGAAGCCTTATAGCTTCTTCAACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GATCAATTTTTCAGACGGTATGAAAAAGAAGGGGTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTGGGTCGGAAAGGAAAGCGGAGGGAAGGACTTGAATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGAGTTTTTGATGGGTTCGAACGGTGTCGTTTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACACGTCCGCCCTATTCTTCTCACGTGTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACCGAGTCGTCTCGTTCTCGCTAACCGAGTCGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAGTCGCTGTTCAGGCTTGACGTAATCCGCTGGCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAGTCGAAGTTCGAGCTTACAGGCGACGCGGGAGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGGGAAACGGTGTTTGTGGAAGATGGCAACGAAATTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACAAAAGCTAGTTGAAGAACGTAGGGAGTATCTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGTATTGGCTGAAAGACAATCAAGTGATATGTATGATCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGATTCTACTTCTACCCGTTCGGTCATTCGTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTAATTTCATATGGTGCTCGACGTTTCTTTGATATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAAAGATTCAAATATGATTGAGAGCACGCTTTTAACTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTGCCGATCGTTTCAGCATATAAACGCTGTATAGCTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGATGTATAGCGATGATAAAACGCATGACCTAATATGCCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAATGATGTCATCAATAGCATTAGAAACAATCATCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCACCCACATTTTCACGTTTTACTTGGCGTTAAACC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCTGTGATGTCCGTATTGTTCGTAATAAGCGGAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCGCAAAACGGGCCGTTTGGGATCAGCATTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGAGAGAGGCGGAAGAACTTTGGGGATTGGCACAAAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAAGCTCAGCATCGTTACATACAACAAGAAACAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGACAAAACCAGAAAAGAAATTCACATACCTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAAGAACGGGAAAACAGGTCAATCGGAAGTGCAGTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAACAAAACGATAGAAACGCAACACTTCCGCGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAAAAGGAGTGACAACATGAGTATTTTCCGTGTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGGTTTTGCTTTACGCATTATTAGCTTCATTCATAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAATAACAAACACATCGCCAGCTTGCACGTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGGATTGACGACATTGGGGAAGAACTTGTGATTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAATGGATCAGTCATCGGTTCTTGTTGTGGTTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACATATACGAAACAATGGAATTAACGCAACAACGATATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTAATACCTTCCATCGTTCCTGTCATTCAAAAAACAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTATTTAGTGTAGTATTCATTCAGTTCCTGCATGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAACAAAAACCACCGCCTCAGCTTATTCGCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG

>NC_011567|2|2|804177-809818|CRISPRCasFinder
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACACATGATGATATAGTCAAGCTGCTCGCGAATAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGATCGTGAACGGCCGAAAGTTCTTATTGTTGATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGTTCAAAGTTGCGAAGTAGAAAAGACAAGAATATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCGAAAAAGAAGGAAGAAATTATTGTAGCACTCAAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTCTTTCTGCACTCATTTATTCTTAGTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCAGATCACTAGCAGCAACAGTAATATTAGTAGTAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCCTTCGCGGTTTGTAAGAACACTTGAGACTTTTCCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGCCAGATAAGTCGGTCGCGAGTAGTTGCGGAGCAGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CATATCTGGTCCGCTTGGTCCACGTCGTTTGTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCATAAGCACACTCGATCATTTCAAACACTTTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGATAAATTGTGTTTAAACGGATGTAAACAAAAAGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAGATTGCAAAACGTCCTGGAATCAAATCCGCTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCTTCGGCATTTTGAAGTTTTTAACCGTGCTAACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGAAACACAGGTGTTTTTTCTGACTTACCGCCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGCATTTTTGACATGATACATCATCAAAACTAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCACCGCCATGTTTCATCCGCCCAAGCGCCTCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCTCATGTTCTGCTTTGCAATCAGTACACACGGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTTGTTTCCAGCGGAATTCGCTTTTTCAAATACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCTTTTCTTTCCCGACATTCACAAAAACTCGCAATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATCTCTGAAGAAATCCTAGTATTCACTCGAACCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCCTTGAATTTTGCTTCCACTGCTTTTTGAACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGTTCCGAATGAAGAAGCCGAATGGCTTCTTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATTGATGGATGAAGCGATGCGTGAAGCCGCTTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATGGAGAGCAAAAAGGAAAATGCAAAGGATTTGGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAAACAGCAATGTTGCTTCTCAATCACTTGGTGATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGTGAAATAAAACAGAAGGCGCTGGCGCCGCGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACAATCTGCCACGTTTTTTTTATGACAGGAACGATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACGCATCCGCTCTATTTTTCTCTTTATCCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTTCGGCATTTTGAAGTTTTTTACAAAGTCTGCAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCGGTGGAGAAATGAAACTAAAGGACATCGCCGCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGATGATTTTGCATTTTTCGCTGTTTCTCTCGGCTCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATTCGCGAAGTAAGTTTTGACCTAAACCGATCGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTGACGCTATTTTTTAAAAATTAAACTGATTTCATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCATATTTTTCTGATCCTTCTGCTCGTGCTACTCTGTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGATTGAAACGAACGTGTAGCACGGCTAGCACGTTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTTTAACTTGTTGTTCAAACGGCAAGTCCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTTAACCTCATCTTTTTTCCCTTCCTCTTTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTAATATGGGGATACATGTTGAAATGTCTGGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACGATTTCGAAAATGAAAACGGTGAACGCGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGCTACTCAAGCCTGGTGCAGAAAAGATTCAGATGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTGTCGATAAAGTTGTTGACTTCAAATATTTAGAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAAGGGTCAATATCAATAAAATCTGCTTCATCTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAGCAAAAGGTTTATGCTCATGTCGTTAGCTATCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGATAAAGCCATGTCCAATGTCGCGACGACCTCATCAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGCTTCAAAAATACCCGCTAATTGAAAATTTTCTTCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAGAATTCGCAGACTGTTTGCATTTCATCTTGTCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGTTTTGACCTCATCTTTTTTCCCTTCCTCTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCCAGTGATCAAGGCACGTTCGCTTCGCTCACTTAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACATAGACGTCATGAGGAAGAACAGAGTAGTCGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGAATGAAGAAGCCTTATAGCTTCTTCAACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GATCAATTTTTCAGACGGTATGAAAAAGAAGGGGTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTGGGTCGGAAAGGAAAGCGGAGGGAAGGACTTGAATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGAGTTTTTGATGGGTTCGAACGGTGTCGTTTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACACGTCCGCCCTATTCTTCTCACGTGTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACCGAGTCGTCTCGTTCTCGCTAACCGAGTCGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAGTCGCTGTTCAGGCTTGACGTAATCCGCTGGCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAGTCGAAGTTCGAGCTTACAGGCGACGCGGGAGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGGGAAACGGTGTTTGTGGAAGATGGCAACGAAATTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACAAAAGCTAGTTGAAGAACGTAGGGAGTATCTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGTATTGGCTGAAAGACAATCAAGTGATATGTATGATCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGATTCTACTTCTACCCGTTCGGTCATTCGTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTAATTTCATATGGTGCTCGACGTTTCTTTGATATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAAAGATTCAAATATGATTGAGAGCACGCTTTTAACTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTGCCGATCGTTTCAGCATATAAACGCTGTATAGCTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGATGTATAGCGATGATAAAACGCATGACCTAATATGCCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAATGATGTCATCAATAGCATTAGAAACAATCATCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCACCCACATTTTCACGTTTTACTTGGCGTTAAACC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCTGTGATGTCCGTATTGTTCGTAATAAGCGGAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCGCAAAACGGGCCGTTTGGGATCAGCATTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGAGAGAGGCGGAAGAACTTTGGGGATTGGCACAAAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAAGCTCAGCATCGTTACATACAACAAGAAACAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGACAAAACCAGAAAAGAAATTCACATACCTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAAGAACGGGAAAACAGGTCAATCGGAAGTGCAGTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAACAAAACGATAGAAACGCAACACTTCCGCGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAAAAGGAGTGACAACATGAGTATTTTCCGTGTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGGTTTTGCTTTACGCATTATTAGCTTCATTCATAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAATAACAAACACATCGCCAGCTTGCACGTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGGATTGACGACATTGGGGAAGAACTTGTGATTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAATGGATCAGTCATCGGTTCTTGTTGTGGTTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACATATACGAAACAATGGAATTAACGCAACAACGATATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTAATACCTTCCATCGTTCCTGTCATTCAAAAAACAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTATTTAGTGTAGTATTCATTCAGTTCCTGCATGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAACAAAAACCACCGCCTCAGCTTATTCGCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG

>NC_011567|2|1|804177-809818|CRT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACACATGATGATATAGTCAAGCTGCTCGCGAATAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGATCGTGAACGGCCGAAAGTTCTTATTGTTGATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGTTCAAAGTTGCGAAGTAGAAAAGACAAGAATATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCGAAAAAGAAGGAAGAAATTATTGTAGCACTCAAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTCTTTCTGCACTCATTTATTCTTAGTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCAGATCACTAGCAGCAACAGTAATATTAGTAGTAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCCTTCGCGGTTTGTAAGAACACTTGAGACTTTTCCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGCCAGATAAGTCGGTCGCGAGTAGTTGCGGAGCAGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CATATCTGGTCCGCTTGGTCCACGTCGTTTGTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCATAAGCACACTCGATCATTTCAAACACTTTTTCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGATAAATTGTGTTTAAACGGATGTAAACAAAAAGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAGATTGCAAAACGTCCTGGAATCAAATCCGCTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCTTCGGCATTTTGAAGTTTTTAACCGTGCTAACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGAAACACAGGTGTTTTTTCTGACTTACCGCCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTGCATTTTTGACATGATACATCATCAAAACTAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCACCGCCATGTTTCATCCGCCCAAGCGCCTCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCTCATGTTCTGCTTTGCAATCAGTACACACGGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTTGTTTCCAGCGGAATTCGCTTTTTCAAATACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCTTTTCTTTCCCGACATTCACAAAAACTCGCAATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATCTCTGAAGAAATCCTAGTATTCACTCGAACCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCCTTGAATTTTGCTTCCACTGCTTTTTGAACAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGTTCCGAATGAAGAAGCCGAATGGCTTCTTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATTGATGGATGAAGCGATGCGTGAAGCCGCTTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAATGGAGAGCAAAAAGGAAAATGCAAAGGATTTGGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAAACAGCAATGTTGCTTCTCAATCACTTGGTGATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGTGAAATAAAACAGAAGGCGCTGGCGCCGCGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACAATCTGCCACGTTTTTTTTATGACAGGAACGATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACGCATCCGCTCTATTTTTCTCTTTATCCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTTCGGCATTTTGAAGTTTTTTACAAAGTCTGCAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCGGTGGAGAAATGAAACTAAAGGACATCGCCGCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGATGATTTTGCATTTTTCGCTGTTTCTCTCGGCTCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATTCGCGAAGTAAGTTTTGACCTAAACCGATCGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTGACGCTATTTTTTAAAAATTAAACTGATTTCATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCATATTTTTCTGATCCTTCTGCTCGTGCTACTCTGTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GCAAAAGAAGGCAAGTCTTATGAGCAAATCCTCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGATTGAAACGAACGTGTAGCACGGCTAGCACGTTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCTTTAACTTGTTGTTCAAACGGCAAGTCCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTTAACCTCATCTTTTTTCCCTTCCTCTTTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTAATATGGGGATACATGTTGAAATGTCTGGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACGATTTCGAAAATGAAAACGGTGAACGCGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGCTACTCAAGCCTGGTGCAGAAAAGATTCAGATGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTTGTCGATAAAGTTGTTGACTTCAAATATTTAGAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAAGGGTCAATATCAATAAAATCTGCTTCATCTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAGCAAAAGGTTTATGCTCATGTCGTTAGCTATCTCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGATAAAGCCATGTCCAATGTCGCGACGACCTCATCAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCGCTTCAAAAATACCCGCTAATTGAAAATTTTCTTCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAGAATTCGCAGACTGTTTGCATTTCATCTTGTCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGTTTTGACCTCATCTTTTTTCCCTTCCTCTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCCAGTGATCAAGGCACGTTCGCTTCGCTCACTTAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACATAGACGTCATGAGGAAGAACAGAGTAGTCGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGAATGAAGAAGCCTTATAGCTTCTTCAACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GATCAATTTTTCAGACGGTATGAAAAAGAAGGGGTACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTGGGTCGGAAAGGAAAGCGGAGGGAAGGACTTGAATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGAGTTTTTGATGGGTTCGAACGGTGTCGTTTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGCAACACGTCCGCCCTATTCTTCTCACGTGTCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACCGAGTCGTCTCGTTCTCGCTAACCGAGTCGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAGTCGCTGTTCAGGCTTGACGTAATCCGCTGGCGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAGTCGAAGTTCGAGCTTACAGGCGACGCGGGAGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGGGAAACGGTGTTTGTGGAAGATGGCAACGAAATTACG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AACAAAAGCTAGTTGAAGAACGTAGGGAGTATCTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGTATTGGCTGAAAGACAATCAAGTGATATGTATGATCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAGATTCTACTTCTACCCGTTCGGTCATTCGTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTAATTTCATATGGTGCTCGACGTTTCTTTGATATGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAAAGATTCAAATATGATTGAGAGCACGCTTTTAACTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTGCCGATCGTTTCAGCATATAAACGCTGTATAGCTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGATGTATAGCGATGATAAAACGCATGACCTAATATGCCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAATGATGTCATCAATAGCATTAGAAACAATCATCCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCACCCACATTTTCACGTTTTACTTGGCGTTAAACC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCTGTGATGTCCGTATTGTTCGTAATAAGCGGAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATCGCAAAACGGGCCGTTTGGGATCAGCATTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGAGAGAGGCGGAAGAACTTTGGGGATTGGCACAAAAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACAAGCTCAGCATCGTTACATACAACAAGAAACAC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGACAAAACCAGAAAAGAAATTCACATACCTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCAAGAACGGGAAAACAGGTCAATCGGAAGTGCAGTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAACAAAACGATAGAAACGCAACACTTCCGCGTCAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAAAAGGAGTGACAACATGAGTATTTTCCGTGTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGGTTTTGCTTTACGCATTATTAGCTTCATTCATAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAATAACAAACACATCGCCAGCTTGCACGTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGGATTGACGACATTGGGGAAGAACTTGTGATTGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAATGGATCAGTCATCGGTTCTTGTTGTGGTTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACATATACGAAACAATGGAATTAACGCAACAACGATATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTAATACCTTCCATCGTTCCTGTCATTCAAAAAACAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTATTTAGTGTAGTATTCATTCAGTTCCTGCATGTGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAACAAAAACCACCGCCTCAGCTTATTCGCTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NC_011567.1\|WP_080513057.1\|817799_818165_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180266
NC_011567.1\|WP_012574458.1\|820550_820808_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_041638066.1\|819568_819895_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_011567.1\|WP_148205016.1\|820298_820529_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012574450.1\|809988_810552_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012574452.1\|816990_817752_+\|DUF4405-domain-containing-protein	unknown	unknown	gnl\|CDD\|379580
NC_011567.1\|WP_012574440.1\|794303_794561_+\|YrhC-family-protein	unknown	unknown	gnl\|CDD\|372926
NC_011567.1\|WP_041638065.1\|800049_802227_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NC_011567.1\|WP_012574441.1\|795078_795702_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NC_011567.1\|WP_012574453.1\|818211_818709_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NC_011567.1\|WP_012574454.1\|818808_819567_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NC_011567.1\|WP_012574448.1\|802738_803722_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_011567.1\|WP_012574444.1\|798446_799334_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_011567.1\|WP_041638064.1\|795949_796678_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187783
NC_011567.1\|WP_012574443.1\|796674_798450_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NC_011567.1\|WP_012574447.1\|802241_802739_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_011567.1\|WP_012574445.1\|799336_800038_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NC_011567.1\|WP_012574449.1\|803723_803987_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_011567.1\|WP_012574456.1\|820053_820278_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_011567.1\|WP_012574451.1\|811933_812734_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225806

Protein	Function_ID	Function_description	E-value
NC_011567.1\|WP_080513057.1\|817799_818165_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	1.35158e-62
NC_011567.1\|WP_041638066.1\|819568_819895_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.10273e-18
NC_011567.1\|WP_012574441.1\|795078_795702_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	4.37952e-39
NC_011567.1\|WP_012574452.1\|816990_817752_+\|DUF4405-domain-containing-protein	gnl\|CDD\|379580	pfam14358, DUF4405, Domain of unknown function (DUF4405). This presumed domain is functionally uncharacterized. This domain family is found in bacteria and archaea, and is approximately 50 amino acids in length. There are two conserved histidines that may be functionally important. This family is N-terminally truncated compared to other members of the clan.	2.07241e-09
NC_011567.1\|WP_012574440.1\|794303_794561_+\|YrhC-family-protein	gnl\|CDD\|372926	pfam14143, YrhC, YrhC-like protein. The YrhC-like protein family includes the B. subtilis YrhC protein, which is functionally uncharacterized. YrhC is on the same operon as the MccA and MccB genes, which are involved in the conversion of methionine to cysteine. Expression of this operon is repressed in the presence of sulphate or cysteine. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length.	1.08433e-24
NC_011567.1\|WP_041638065.1\|800049_802227_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.1283e-67
NC_011567.1\|WP_012574453.1\|818211_818709_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	6.51866e-08
NC_011567.1\|WP_012574454.1\|818808_819567_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.80494e-20
NC_011567.1\|WP_012574448.1\|802738_803722_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.55045e-167
NC_011567.1\|WP_012574444.1\|798446_799334_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.02304e-58
NC_011567.1\|WP_041638064.1\|795949_796678_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.64671e-24
NC_011567.1\|WP_012574443.1\|796674_798450_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.42556e-10
NC_011567.1\|WP_012574447.1\|802241_802739_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	7.77109e-60
NC_011567.1\|WP_012574445.1\|799336_800038_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.05958e-33
NC_011567.1\|WP_012574449.1\|803723_803987_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.83756e-29
NC_011567.1\|WP_012574456.1\|820053_820278_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.03319e-17
NC_011567.1\|WP_012574451.1\|811933_812734_+\|AAA-family-ATPase	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	3.69142e-37

>NC_011567.1|WP_012574449.1|803723_803987_+|CRISPR-associated-endonuclease-Cas2
MFVIITYDVGEKRVNKVCKKLREYLTWTQNSVFEGEITKSLLMKCLNEIDQIIDEDEDSIYIYEVANPKNIKKQVFGQEKNFDELFL
>NC_011567.1|WP_012574448.1|802738_803722_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MLRDHYIFSNGRLKRKDNTLYFFDEEENKKSLPVHQTDNLYVFGEIDLNSSLLNLLSQHDVHLHVFNYYGFYAGTFCPRNKKVSGFTVVQQSAHYLDLEKRLYMAKAFLQSAVHHMLRNIRRYKEKTEQYVQVIEEEAKKMDSATTVQELMGIEGRIRQHYYQSFNAILKQDFIFEKRTKQPPQDPLNALISFGNSLCYTAVLSEIYKTQLDPTISFLHEPSTKRFSLCLDLAEIFKPLIVDVVIISCINNRIITQKHFDFLDGMVLLNEEGKKRFIKEWDEKLSTTVQHRKLKRKVSYRYFIRLECYKLIKHFIGDEPYKPLKAWW
>NC_011567.1|WP_012574447.1|802241_802739_+|CRISPR-associated-protein-Cas4
MVSGVQMQYYKVCKRKLWLFSKGIAMEDEHERVIEGKILHERAYPRLEDREILVDDSFKLDALDGEYIREVKLSSKMSEADRFQMLYYLYELKKRGVQKKGLISYTKERKTEEIELTEKDEVAIEKAIKEIYAIVHSASPPKLKKLPYCTKCAYYEFCFALEGDD
>NC_011567.1|WP_041638065.1|800049_802227_+|CRISPR-associated-helicase/endonuclease-Cas3
MVFYAKSEGKETIREHTDRLLYNLNLLKNSYSNKFTLMDEKMWKLLEIAVQYHDVGKANTVFQNKIRQAIRESMLETDIETDVPHNYLSVGCIPLKQLDLTKEEERLLIHGVGYHHEREQLPEKEMIRQVLENDIKKQLPQLSEHMRLPMTEKFSYRFVDRLLNRYTYHDGEEFWKYVMIKGLLHRLDHAASAHIDVESDVEKSIYINVNEYMKKQGFHKNDLQQFAEQHHDKHVIAIAQTGMGKTEAALLWIQHDKAFFTLPLRVSINAIYDRIKEKMGYDAVGLLHSTSVHYLVDKEENWEELKQQSEHYAKKLLLTTIDQILKFPFYYKGFEKELSAMANAKVVIDEIQAYEPRIAAMLIKSLEMIHRVGGKFMIMTATLPTLYLEELKQRNVINDDQIAIEEFIDTSVNRHRIRLRSEGIEEAIGEVLELGETSQVLVIVNTVRQAMSLYDKFLDCDTQVPIYLLHSQFTQEDRQLLEKHIKQFNEDNERGIWITTQLVEASIDIDFDYLFTEMSTLDSLFQRFGRCYRKRELDHDNCNIHIFTENISGIPRVYNEHLVNESIRLLEPYDHQIVDERAKVEMVKQLYDRKQLKGTSFLKEFEDALYMFDNLDPYGMDKRKAQQKLRDIQNIQIITRQMYDQIEHLFERYKEEKEWKKRLKLRMEIEKKTVSVQRYIAEKYVSERLPKPFDHIYIAEVEYDFNRERLKGKGILLDKPSSNQH
>NC_011567.1|WP_012574445.1|799336_800038_+|type-I-B-CRISPR-associated-protein-Cas5
MKALRLKLFQETACYKKPFASKVAETYPLPPYSTVKGMIHALLNADQFIPMRLSVQGTYEEKLLDYQRYYFFKKKELSSFPLVLDGLARMEFSYDKNEITTMPMYTHLLHNVHLLIHIEAEQHILKQIIHAIEYSMTHYSLGRWEDLVRIDEYKLVDVQELEEEKTLQWNAYIPSNFLDRETKSIPYQLNWKYEIVNGIRQWEKINVGYVQKEIEAPEGVWIDEDGELVFYHL
>NC_011567.1|WP_012574444.1|798446_799334_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKKALTMTVIFQANSLNYGEGIANISELKKFHRGDGEVYTYASRQSIRYDIVRLGNELFGWNLDTVDKASGVVQFKKDVTINDSVEMDLFGYLKTDKNSQKRPAVVRLSHAISLEPYKSDLEFLNNMGLASRIGQDANLANIEQHHSFYTYTLTIDLNRVGVDGEIELPNEEKANRVLQLLEVLKVLNRNIRGRQENLAPLFVIGGMYHVANPFFLGRVQLSTTANGWAVQTKPIKETMEQTFAGEAIGKDTRIGILSGVFANEGEFYDLFNEQVMTVEPFFQYVSKQIQSYYGV
>NC_011567.1|WP_012574443.1|796674_798450_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKVKLHMGEWMINMGLVGLYRVFEYGRKNGIISDEYKDSVTVKPWGIELDTDVLPQLPKAYFLYLLEEYSIARRECERLDSYIEQVKKEENFKNVVSSIKKSINDTGKKVLKYFPYPSLEDVLEKLKDVKKAEHVSQLIGYINEFKTIINDQKVNEKLTLNYFKPAILRSFFGQVSFLNVAKNNLDFDGHIEEFYKSYIVPVLNDLIFEQAIETSRSSEEMNAFLETHNDYQPFKQLKREVRKKTIEEIREYVRTNINKCLLFNERVAFYNFEEMVFSPIGVAKDNAFNFSWHFDSQQPKPLSSLAKLVLLFAPIGSTIYYKSEGINEQTERRLYAGFVQTDATFAEILQKNNHFSQLKKKREPFNKIVSQLVQSVKKESEYTVDHLFFLEFFSDYDSKKTHLHYYHLPMYLAHYFKQHADKLDYIKPYDYREQFVQYVLRGADPVYVIYNYLRDCIKNERGTIGPYIAVQERHRILQFKKGVRDMSTTDKRVSALFMQGREIREAIIRSSSSEKKVTSIAYRLLNAAKAGNRKNFMDTLLRIYMSADRPISPIFLNALHERDLDFATVANAFIAGLLANQYKEEQEEVQA
>NC_011567.1|WP_041638064.1|795949_796678_+|CRISPR-associated-endoribonuclease-Cas6
MRIICSFEVKKIPLHYRMMIVSILKESIRASSEEYYERLYAQENATKPFVFSPFLKNFRFKGDEIELDELRVIISSPDYEFLLHVYNGLQSKKRFEYKGYELIRRKTVMGDEKKITSSTVVFRTLSPLLVEDENKSPIAPDDKNYEKHINYLADTILYEYRGTGLCRPLTIRPIRFKKMVIKESNRQFTEKYGEEQHLYFTAYHGLFKVSGDPVDLQLIYQLGLSKRRNQGFGMLEVEEVKG
>NC_011567.1|WP_012574441.1|795078_795702_-|thermonuclease-family-protein
MFRAIFSFLIAFTILFTSSAYAHPGKTDENGGHTCRTNCEKWGLKTGEYHYHDKNGNIIRQKSKDTGVPSIRVNSKHIVKVIRVVDGDTIDVRFSNGATSRVRFIGVNTPETVHPQKPVEKYGKEASNYTKKRLTNKTVTLEFDVGVKDKYGRFLAYVWVGKELYNETLVKDGYARVMTIQPNVKYQQRFLEAERKARLQKKGLWKS
>NC_011567.1|WP_012574440.1|794303_794561_+|YrhC-family-protein
MKEGRGTVMLDEQKQHWLGKARDYKAYSLVLFALSAFLYIGTLIPSAIDEAKRPLALGAVFILMLASIFFSHRSHIYARKIEEEA
>NC_011567.1|WP_012574450.1|809988_810552_+|hypothetical-protein
MIQLYDFGIDVQTYANRGKQNAFPFIHRCPHCQAKRNLYRHGYYERNALVGQDAYRIWVARYRCAICKKTVSVLPTFLLPYFQYTIWTIIHWLKERLSSLLGKGKGSSKFFPLRQGVDVYMHRFLAHLPWLRWFFQTKGKQIPRLSDEPLVQAQEWIQHLEGDGLEKLIEAMWKEQSTHFLANRFGA
>NC_011567.1|WP_012574451.1|811933_812734_+|AAA-family-ATPase
MYKTFYSLSREPFSKDTNPSEAYRGSSYEETLHALDYVKRTKGIGLLTGEPGAGKTFALRTFKESLNPSLYHVVYFPLSTGGVMDFYRGLALGLGEEPKYRKVDLFYQIQQGIERMYQERRITPVILLDEMHLAKDAFLQDIAILFNFHMDSTNPFVLILAGLPHLQIRLRLNHHRPLQQRIIMRYRMGALSKEEVAAYIEQRMKQAGAKHSIFTPAALEAIALQSQGWPRVINTLTTTCLLYGYQLKKDVIDEEIVRMAVEETGA
>NC_011567.1|WP_012574452.1|816990_817752_+|DUF4405-domain-containing-protein
MLKKNIVKIILDISMAITFVLLMNPRVFNGLPFHEVAGLVIGVAVLVHIGLNYQWVVHTVKKIFDRSFSGKTRFSFLLNVLLLLSMTGIIVTGILISKVVFPHLLGGENHALREIHDVFSKLTLLLVGVHIALHWQWIMGVFRKMLKTKEGKWRKGAVVAFVFVLAMFIGSMQWLATNVKPDEAFQPKFEQKVAQASGTFSPPEKFRERRHEEHHGNSHPLLVILGHFTFWAVVIVAVYYIEKRMRHKRQVRV
>NC_011567.1|WP_080513057.1|817799_818165_-|sigma-70-family-RNA-polymerase-sigma-factor
MHLRSLKKTRKDVSLHDPIGQDRDGNEISLLDVLKSEDEDISDMIEKNNELENIAQHLHVLDDRERQVIISRFGLNMQPERTQREIAKELGISRSYVSRIEKRALMKLFHECYKHEKGKKE
>NC_011567.1|WP_012574453.1|818211_818709_-|ImmA/IrrE-family-metallo-endopeptidase
MYLYKPCDLEKRISEAYQQNGIIYPSQLDEEYIARKFDILLVESKFGSFAEYCDDLKIVALHHDLDSLKRREVFFHEIGHLFLHVGDQSKMTESFRFFQESQAKRFTLFAAIPYHMLTYIDFSKKRDFIIYEMQETFRVPPKICESRLDYIENKVLSTKLEAACL
>NC_011567.1|WP_012574454.1|818808_819567_-|restriction-endonuclease
MAKKMPSRRERQNAVISLFTFPAVIIGFYLIMKGVIGIIGLMVISLIAFFIGSWVASYVPDMRKKENKNKNPYTGLPQKTAEKKPAKASSSQKRTSQASSSQTTGKYNVRPDDVIIQLPLEELEGLEFEQLVYLYLKATGWKPIKTPETKDGGVDIVVINKTDGLKTAVQVKHYYRSKTQVTVKDIRELDSAKKNHRCIGTWFITSGTFTNAALVEADTRRMKTSDVTFVETKIIPWKEREAAKRQVAAAKK
>NC_011567.1|WP_041638066.1|819568_819895_-|helix-turn-helix-transcriptional-regulator
MISFGDRLQELRNKMKLRQEDVAKKIGVGRTTYAMYEQGKREPDYETLLKIANFFGVSVDYLLTGQDKTDNEKNLFFFDMEGLSEQEIEEIKKHIEFIKWKAKQERGN
>NC_011567.1|WP_012574456.1|820053_820278_+|helix-turn-helix-transcriptional-regulator
MREWLKKKRLDTGLTQKEIAKLVGISRSTYAMIENGERNPSVSVAKRIADALKFDWTIFFDDKCHVLCTKDCPA
>NC_011567.1|WP_148205016.1|820298_820529_+|hypothetical-protein
MQKFKQVWHSENGKYRVVGIQFTDEITPTIFVQVEGRKTSLTYNMRTKEKLPKYVVDACESIKQELTFLCNHCKSN
>NC_011567.1|WP_012574458.1|820550_820808_+|hypothetical-protein
MLKKGFYLEEIDKKNKALLCIDYMLEAIFNKDYETAEIEAKEFLAVIEMLKEIEVKKKRRAELEQLVSEMQKQGIKIDFATKVHA

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Crispr_ID: NC_011567_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011567_3

812915-816909

Unclear

I-A

Consensus_repeat	Method
GTTTTATCTGAACGTAGTGGGATGTAAAG	PILER-CR
GTTTTATCTGAACGTAGTGGGATGTAAAG	CRISPRCasFinder
GTTTTATCTGAACGTAGTGGGATGTAAAG	CRT

60 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NC_011567_3

>merge|NC_011567|3|812915-816909|PILER-CR,CRISPRCasFinder,CRT
GTTTTATCTGAACGTAGTGGGATGTAAAGAGAAGGAATTTTGTATCATTTTTGTATCAGTCTTGTGGTTTTATCTGAACGTAGTGGGATGTAAAGAAGCATCGGTTAGATTACATTAAAAGCTTCAAGTATGTGTTTTATCTGAACGTAGTGGGATGTAAAGTTATTATTTGCATGAATAGCCGCATCGAGGCGTGCGTTTTATCTGAACGTAGTGGGATGTAAAGTTTTTGGAAGTTATACATAGTTTGAGACGGATTTAAGAGTTTTATCTGAACGTAGTGGGATGTAAAGTAGAGATGAAGCCCTTTTACAGCGTCCGCAAAGCGTTTTGTTTTATCTGAACGTAGTGGGATGTAAAGTTGATAAACACGTTAACAAAAAACATCGCATGTTCCGTTTTATCTGAACGTAGTGGGATGTAAAGGAATATTACGAAAAGCTTGAATGGATGCTACCTGATGGTTTTATCTGAACGTAGTGGGATGTAAAGGGGAGTTCTACACTAATCTTTTCAGGGAACAACTCATTCGTTTTATCTGAACGTAGTGGGATGTAAAGGAGCGGTTTGACGTGGAATTAGGAGCGGAATTGTTTGTTTTATCTGAACGTAGTGGGATGTAAAGGTTGAATTTAATGATGGAAAGACGATGTATAGTGCTGGTTTTATCTGAACGTAGTGGGATGTAAAGAGGAGAAACAGAAGTGGAAAGCATCGTTCATTCCTATGTTTTATCTGAACGTAGTGGGATGTAAAGAATGAACGCTCCTAAACTTGCGAATAAACCTGTAAGTTTTATCTGAACGTAGTGGGATGTAAAGTTTTTTCGTCTGACGAATATTTTTTCGTATATACGTGTTTTATCTGAACGTAGTGGGATGTAAAGTAAACTTCGTGTTCGGTGACACTTTCACAAATTTTCGTTTTATCTGAACGTAGTGGGATGTAAAGATAAGTTCAAAATGCCCTTATAGTGCAATATTTTTTAGTTTTATCTGAACGTAGTGGGATGTAAAGGACGCAGAAGATGACACTGGCATCGAATGGCTCAAGTTTTATCTGAACGTAGTGGGATGTAAAGCTGGGAATGGTTTGAGGAACAAGTGAAACCGTATCGTGGTTTTATCTGAACGTAGTGGGATGTAAAGTGTCACCCCTTACGCTTTCTTGTGCACGTAAATGGCGTTTTATCTGAACGTAGTGGGATGTAAAGTAATGACGCTATTTTGTTAAAAAAAATTAATTAATTTTGTTTTATCTGAACGTAGTGGGATGTAAAGTGAAATAAAACAGAAGGCGCCTGCGACGCGGACAGCGGTTTTATCTGAACGTAGTGGGATGTAAAGAAGCCGAATATGCGTCATTTGTAGAAAACGGGCATCGCATCGTTTTATCTGAACGTAGTGGGATGTAAAGCTTCTTCTTTCGAGTATGTTTTTGTATCATCTAGCGTTTTATCTGAACGTAGTGGGATGTAAAGTATCGGAGAAAGTGAATCGACACAAAGCTTCTTAAGTTTTATCTGAACGTAGTGGGATGTAAAGTCAAGCGTCACATCGGCGACTAACTGAAAAAGAACGCGTTTTATCTGAACGTAGTGGGATGTAAAGCTTGCCGAGTTGGAACGGATGTATATCACGTTGTGTTGGTTTTATCTGAACGTAGTGGGATGTAAAGTACTCGTACAATTCAATAACATGCCCCGATACAAGTTTTATCTGAACGTAGTGGGATGTAAAGAATCGTCCCCGTTCGCAGGGTAGTTAGTACCTCGCTGAAGTTTTATCTGAACGTAGTGGGATGTAAAGAAGACATCAACGATTCGATGATCGAGAACCATCTCAACCGGTTTTATCTGAACGTAGTGGGATGTAAAGAGCATAGCTTCGCGGTGTGGTTTGTGCCATTCGAGGTTTTATCTGAACGTAGTGGGATGTAAAGTCCACCGAACAACGAGCGGTTGCTTGGTTGACAAAGTTTTATCTGAACGTAGTGGGATGTAAAGTCATAATGAAAGGCGGTACTTTTAAACCCAACCGCCCTAGTTTTATCTGAACGTAGTGGGATGTAAAGGAAGAATACGCAATTGCTGAAAAAAACGGGATATCTCGTTTTATCTGAACGTAGTGGGATGTAAAGATTCAAAATATACATGACATTATCAACCTGCCTTGTATCAAGTTTTATCTGAACGTAGTGGGATGTAAAGTGTTCGTCCAGTTCAACAATTTCCGCAAGTTCAAAAGTTTTATCTGAACGTAGTGGGATGTAAAGATGAATGTGAAGCGTACCATAAGTTCGAGCCAGTGAAGTTTTATCTGAACGTAGTGGGATGTAAAGAAACAAGTGGCGTGGGCTAGCGATATTCGTGATAAGGTTTTATCTGAACGTAGTGGGATGTAAAGCCACGTCAGTACTTTGAGTTGTTTTTTGGAAAATGGGTTTTATCTGAACGTAGTGGGATGTAAAGTAATGGATAGCGGAAATTGCATTGTTATCACCAAAAGTTTTATCTGAACGTAGTGGGATGTAAAGTATTTAGCGGAGATGTGCGTATTAAGCCGGATTTAAGTTTTATCTGAACGTAGTGGGATGTAAAGAAGACATCAACGATTCGATGATCGAGAACCATCTCAACCGGTTTTATCTGAACGTAGTGGGATGTAAAGAATAAAAAACGCCACCACGTCGCACACATCGTGCGAGGTGTTTTATCTGAACGTAGTGGGATGTAAAGTTCTTTTCGAAAAAGAATCGGCTAATCTTCCTCTTTTGCGTTTTATCTGAACGTAGTGGGATGTAAAGAGACTTCCGCAAAAACAAAATCATTCGTGAAATGGACAGTTTTATCTGAACGTAGTGGGATGTAAAGCCGATCATTTGTTCCAACATAGGGCATAAAACATGTATGGTTTTATCTGAACGTAGTGGGATGTAAAGAGATATATTTACGTTTGACGGAACAGCCCCGCGCAGTTTTATCTGAACGTAGTGGGATGTAAAGTATTACCACACAGCTTCCCTTCGCTATTTTTTGTCGTTTTATCTGAACGTAGTGGGATGTAAAGCGTTTTTGAAACTCTATAACCGTTACATATTTGAGAGTTTTATCTGAACGTAGTGGGATGTAAAGGAGGAACAAACACAAACGCCAGAACCCGGACAGACCGAGTTTTATCTGAACGTAGTGGGATGTAAAGACGGCAATATTGAAACGTAGCAGGGTTGTCTTTTTCCGTTTTATCTGAACGTAGTGGGATGTAAAGCAAACAGAAAGTTTTTTGGTTCTTTTTTTCAAAAAAGTTTTATCTGAACGTAGTGGGATGTAAAGGACGCTCTTCAAAGGGTTTCGGTCGACGTGGCATGTCGTTTTATCTGAACGTAGTGGGATGTAAAGAGTAAAGCGGATGAATGGCTAACAGAAGAAGGTTTATTGTTTTATCTGAACGTAGTGGGATGTAAAGTGTTTCCAATGATTTTGTGAAGTGGCGGTCTAAATAGTTTTATCTGAACGTAGTGGGATGTAAAGGTCAACTTGGCAGAAGAAGCGGCAATGACCGCACAACTAGTTTTATCTGAACGTAGTGGGATGTAAAGACCGAAACAGAAAGAATTTAAAAGCAAAAAGGGAAATAAAGTTTTATCTGAACGTAGTGGGATGTAAAGGACGCTAAAGAACTCGAAGGAATGGCTTTTGAAACTGTTTTATCTGAACGTAGTGGGATGTAAAGCAAGAACAAGCGACATTAGTGTTAAAGGAGTTTATGCAAGTTTTATCTGAACGTAGTGGGATGTAAAGCGCCAATACCCAGCGGAAGGGCTTGTCGCGTTGTTGGGTTTTATCTGAACGTAGTGGGATGTAAAGCTCTTTCACTTCATGAGGATTTAATTTGAATTTTTCCGTTTTATCTGAACGTAGTGGGATGTAAAGGTTAAAGTGTCTTGACCATTCATAGACCGTTCTCAGTTTTATCTGAACGTAGTGGGATAAAGCC

>NC_011567|3|3|812915-816845|PILER-CR
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAGGAATTTTGTATCATTTTTGTATCAGTCTTGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCATCGGTTAGATTACATTAAAAGCTTCAAGTATGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTATTATTTGCATGAATAGCCGCATCGAGGCGTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTGGAAGTTATACATAGTTTGAGACGGATTTAAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAGAGATGAAGCCCTTTTACAGCGTCCGCAAAGCGTTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGATAAACACGTTAACAAAAAACATCGCATGTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAATATTACGAAAAGCTTGAATGGATGCTACCTGATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGGAGTTCTACACTAATCTTTTCAGGGAACAACTCATTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGCGGTTTGACGTGGAATTAGGAGCGGAATTGTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTTGAATTTAATGATGGAAAGACGATGTATAGTGCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGAGAAACAGAAGTGGAAAGCATCGTTCATTCCTAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATGAACGCTCCTAAACTTGCGAATAAACCTGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTTCGTCTGACGAATATTTTTTCGTATATACGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAACTTCGTGTTCGGTGACACTTTCACAAATTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAGTTCAAAATGCCCTTATAGTGCAATATTTTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCAGAAGATGACACTGGCATCGAATGGCTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTGGGAATGGTTTGAGGAACAAGTGAAACCGTATCGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTCACCCCTTACGCTTTCTTGTGCACGTAAATGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGACGCTATTTTGTTAAAAAAAATTAATTAATTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAATAAAACAGAAGGCGCCTGCGACGCGGACAGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCCGAATATGCGTCATTTGTAGAAAACGGGCATCGCATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTCTTCTTTCGAGTATGTTTTTGTATCATCTAGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATCGGAGAAAGTGAATCGACACAAAGCTTCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAGCGTCACATCGGCGACTAACTGAAAAAGAACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGCCGAGTTGGAACGGATGTATATCACGTTGTGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACTCGTACAATTCAATAACATGCCCCGATACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATCGTCCCCGTTCGCAGGGTAGTTAGTACCTCGCTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCATAGCTTCGCGGTGTGGTTTGTGCCATTCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCCACCGAACAACGAGCGGTTGCTTGGTTGACAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCATAATGAAAGGCGGTACTTTTAAACCCAACCGCCCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAAGAATACGCAATTGCTGAAAAAAACGGGATATCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTCAAAATATACATGACATTATCAACCTGCCTTGTATCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCGTCCAGTTCAACAATTTCCGCAAGTTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGAATGTGAAGCGTACCATAAGTTCGAGCCAGTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAACAAGTGGCGTGGGCTAGCGATATTCGTGATAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCACGTCAGTACTTTGAGTTGTTTTTTGGAAAATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGGATAGCGGAAATTGCATTGTTATCACCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTTAGCGGAGATGTGCGTATTAAGCCGGATTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATAAAAAACGCCACCACGTCGCACACATCGTGCGAGGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTTTCGAAAAAGAATCGGCTAATCTTCCTCTTTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGACTTCCGCAAAAACAAAATCATTCGTGAAATGGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGATCATTTGTTCCAACATAGGGCATAAAACATGTATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGATATATTTACGTTTGACGGAACAGCCCCGCGCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTACCACACAGCTTCCCTTCGCTATTTTTTGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTTTTGAAACTCTATAACCGTTACATATTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGGAACAAACACAAACGCCAGAACCCGGACAGACCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGGCAATATTGAAACGTAGCAGGGTTGTCTTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAACAGAAAGTTTTTTGGTTCTTTTTTTCAAAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTCTTCAAAGGGTTTCGGTCGACGTGGCATGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGTAAAGCGGATGAATGGCTAACAGAAGAAGGTTTATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTCCAATGATTTTGTGAAGTGGCGGTCTAAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCAACTTGGCAGAAGAAGCGGCAATGACCGCACAACTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACCGAAACAGAAAGAATTTAAAAGCAAAAAGGGAAATAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTAAAGAACTCGAAGGAATGGCTTTTGAAACT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAGAACAAGCGACATTAGTGTTAAAGGAGTTTATGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCCAATACCCAGCGGAAGGGCTTGTCGCGTTGTTGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTTTCACTTCATGAGGATTTAATTTGAATTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG

>NC_011567|3|3|812915-816909|CRISPRCasFinder
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAGGAATTTTGTATCATTTTTGTATCAGTCTTGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCATCGGTTAGATTACATTAAAAGCTTCAAGTATGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTATTATTTGCATGAATAGCCGCATCGAGGCGTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTGGAAGTTATACATAGTTTGAGACGGATTTAAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAGAGATGAAGCCCTTTTACAGCGTCCGCAAAGCGTTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGATAAACACGTTAACAAAAAACATCGCATGTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAATATTACGAAAAGCTTGAATGGATGCTACCTGATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGGAGTTCTACACTAATCTTTTCAGGGAACAACTCATTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGCGGTTTGACGTGGAATTAGGAGCGGAATTGTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTTGAATTTAATGATGGAAAGACGATGTATAGTGCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGAGAAACAGAAGTGGAAAGCATCGTTCATTCCTAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATGAACGCTCCTAAACTTGCGAATAAACCTGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTTCGTCTGACGAATATTTTTTCGTATATACGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAACTTCGTGTTCGGTGACACTTTCACAAATTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAGTTCAAAATGCCCTTATAGTGCAATATTTTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCAGAAGATGACACTGGCATCGAATGGCTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTGGGAATGGTTTGAGGAACAAGTGAAACCGTATCGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTCACCCCTTACGCTTTCTTGTGCACGTAAATGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGACGCTATTTTGTTAAAAAAAATTAATTAATTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAATAAAACAGAAGGCGCCTGCGACGCGGACAGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCCGAATATGCGTCATTTGTAGAAAACGGGCATCGCATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTCTTCTTTCGAGTATGTTTTTGTATCATCTAGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATCGGAGAAAGTGAATCGACACAAAGCTTCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAGCGTCACATCGGCGACTAACTGAAAAAGAACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGCCGAGTTGGAACGGATGTATATCACGTTGTGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACTCGTACAATTCAATAACATGCCCCGATACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATCGTCCCCGTTCGCAGGGTAGTTAGTACCTCGCTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCATAGCTTCGCGGTGTGGTTTGTGCCATTCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCCACCGAACAACGAGCGGTTGCTTGGTTGACAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCATAATGAAAGGCGGTACTTTTAAACCCAACCGCCCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAAGAATACGCAATTGCTGAAAAAAACGGGATATCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTCAAAATATACATGACATTATCAACCTGCCTTGTATCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCGTCCAGTTCAACAATTTCCGCAAGTTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGAATGTGAAGCGTACCATAAGTTCGAGCCAGTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAACAAGTGGCGTGGGCTAGCGATATTCGTGATAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCACGTCAGTACTTTGAGTTGTTTTTTGGAAAATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGGATAGCGGAAATTGCATTGTTATCACCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTTAGCGGAGATGTGCGTATTAAGCCGGATTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATAAAAAACGCCACCACGTCGCACACATCGTGCGAGGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTTTCGAAAAAGAATCGGCTAATCTTCCTCTTTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGACTTCCGCAAAAACAAAATCATTCGTGAAATGGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGATCATTTGTTCCAACATAGGGCATAAAACATGTATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGATATATTTACGTTTGACGGAACAGCCCCGCGCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTACCACACAGCTTCCCTTCGCTATTTTTTGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTTTTGAAACTCTATAACCGTTACATATTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGGAACAAACACAAACGCCAGAACCCGGACAGACCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGGCAATATTGAAACGTAGCAGGGTTGTCTTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAACAGAAAGTTTTTTGGTTCTTTTTTTCAAAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTCTTCAAAGGGTTTCGGTCGACGTGGCATGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGTAAAGCGGATGAATGGCTAACAGAAGAAGGTTTATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTCCAATGATTTTGTGAAGTGGCGGTCTAAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCAACTTGGCAGAAGAAGCGGCAATGACCGCACAACTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACCGAAACAGAAAGAATTTAAAAGCAAAAAGGGAAATAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTAAAGAACTCGAAGGAATGGCTTTTGAAACT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAGAACAAGCGACATTAGTGTTAAAGGAGTTTATGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCCAATACCCAGCGGAAGGGCTTGTCGCGTTGTTGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTTTCACTTCATGAGGATTTAATTTGAATTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTTAAAGTGTCTTGACCATTCATAGACCGTTCTCA
GTTTTATCTGAACGTAGTGGGATAAAGCC

>NC_011567|3|2|812915-816909|CRT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGAAGGAATTTTGTATCATTTTTGTATCAGTCTTGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCATCGGTTAGATTACATTAAAAGCTTCAAGTATGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTATTATTTGCATGAATAGCCGCATCGAGGCGTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTGGAAGTTATACATAGTTTGAGACGGATTTAAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAGAGATGAAGCCCTTTTACAGCGTCCGCAAAGCGTTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTGATAAACACGTTAACAAAAAACATCGCATGTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAATATTACGAAAAGCTTGAATGGATGCTACCTGATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	GGGAGTTCTACACTAATCTTTTCAGGGAACAACTCATTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGCGGTTTGACGTGGAATTAGGAGCGGAATTGTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTTGAATTTAATGATGGAAAGACGATGTATAGTGCTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGGAGAAACAGAAGTGGAAAGCATCGTTCATTCCTAT
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATGAACGCTCCTAAACTTGCGAATAAACCTGTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTTTTTCGTCTGACGAATATTTTTTCGTATATACGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAAACTTCGTGTTCGGTGACACTTTCACAAATTTTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATAAGTTCAAAATGCCCTTATAGTGCAATATTTTTTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCAGAAGATGACACTGGCATCGAATGGCTCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTGGGAATGGTTTGAGGAACAAGTGAAACCGTATCGTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTCACCCCTTACGCTTTCTTGTGCACGTAAATGGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGACGCTATTTTGTTAAAAAAAATTAATTAATTTT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGAAATAAAACAGAAGGCGCCTGCGACGCGGACAGCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGCCGAATATGCGTCATTTGTAGAAAACGGGCATCGCATC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTCTTCTTTCGAGTATGTTTTTGTATCATCTAGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATCGGAGAAAGTGAATCGACACAAAGCTTCTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCAAGCGTCACATCGGCGACTAACTGAAAAAGAACGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTTGCCGAGTTGGAACGGATGTATATCACGTTGTGTTG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TACTCGTACAATTCAATAACATGCCCCGATACAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATCGTCCCCGTTCGCAGGGTAGTTAGTACCTCGCTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGCATAGCTTCGCGGTGTGGTTTGTGCCATTCGAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCCACCGAACAACGAGCGGTTGCTTGGTTGACAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TCATAATGAAAGGCGGTACTTTTAAACCCAACCGCCCTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAAGAATACGCAATTGCTGAAAAAAACGGGATATCTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATTCAAAATATACATGACATTATCAACCTGCCTTGTATCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTCGTCCAGTTCAACAATTTCCGCAAGTTCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ATGAATGTGAAGCGTACCATAAGTTCGAGCCAGTGAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAACAAGTGGCGTGGGCTAGCGATATTCGTGATAAG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCACGTCAGTACTTTGAGTTGTTTTTTGGAAAATGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	TAATGGATAGCGGAAATTGCATTGTTATCACCAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTTAGCGGAGATGTGCGTATTAAGCCGGATTTAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	AAGACATCAACGATTCGATGATCGAGAACCATCTCAACCG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AATAAAAAACGCCACCACGTCGCACACATCGTGCGAGGT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TTCTTTTCGAAAAAGAATCGGCTAATCTTCCTCTTTTGC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGACTTCCGCAAAAACAAAATCATTCGTGAAATGGACA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CCGATCATTTGTTCCAACATAGGGCATAAAACATGTATG
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGATATATTTACGTTTGACGGAACAGCCCCGCGCA
GTTTTATCTGAACGTAGTGGGATGTAAAG	TATTACCACACAGCTTCCCTTCGCTATTTTTTGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGTTTTTGAAACTCTATAACCGTTACATATTTGAGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GAGGAACAAACACAAACGCCAGAACCCGGACAGACCGA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACGGCAATATTGAAACGTAGCAGGGTTGTCTTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAACAGAAAGTTTTTTGGTTCTTTTTTTCAAAAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTCTTCAAAGGGTTTCGGTCGACGTGGCATGTC
GTTTTATCTGAACGTAGTGGGATGTAAAG	AGTAAAGCGGATGAATGGCTAACAGAAGAAGGTTTATT
GTTTTATCTGAACGTAGTGGGATGTAAAG	TGTTTCCAATGATTTTGTGAAGTGGCGGTCTAAATA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTCAACTTGGCAGAAGAAGCGGCAATGACCGCACAACTA
GTTTTATCTGAACGTAGTGGGATGTAAAG	ACCGAAACAGAAAGAATTTAAAAGCAAAAAGGGAAATAAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	GACGCTAAAGAACTCGAAGGAATGGCTTTTGAAACT
GTTTTATCTGAACGTAGTGGGATGTAAAG	CAAGAACAAGCGACATTAGTGTTAAAGGAGTTTATGCAA
GTTTTATCTGAACGTAGTGGGATGTAAAG	CGCCAATACCCAGCGGAAGGGCTTGTCGCGTTGTTGG
GTTTTATCTGAACGTAGTGGGATGTAAAG	CTCTTTCACTTCATGAGGATTTAATTTGAATTTTTCC
GTTTTATCTGAACGTAGTGGGATGTAAAG	GTTAAAGTGTCTTGACCATTCATAGACCGTTCTCA
GTTTTATCTGAACGTAGTGGGATAAAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_011567.1\|WP_080513057.1\|817799_818165_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180266
NC_011567.1\|WP_012574458.1\|820550_820808_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_041638066.1\|819568_819895_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_011567.1\|WP_012574460.1\|821085_821313_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_148205016.1\|820298_820529_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012574450.1\|809988_810552_+\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012574452.1\|816990_817752_+\|DUF4405-domain-containing-protein	unknown	unknown	gnl\|CDD\|379580
NC_011567.1\|WP_041638065.1\|800049_802227_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NC_011567.1\|WP_012574461.1\|821322_823620_+\|primase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|235927
NC_011567.1\|WP_012574453.1\|818211_818709_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NC_011567.1\|WP_012574454.1\|818808_819567_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NC_011567.1\|WP_012574448.1\|802738_803722_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_011567.1\|WP_012574444.1\|798446_799334_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_011567.1\|WP_041638064.1\|795949_796678_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|187783
NC_011567.1\|WP_012574443.1\|796674_798450_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NC_011567.1\|WP_012574447.1\|802241_802739_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_011567.1\|WP_012574445.1\|799336_800038_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NC_011567.1\|WP_012574449.1\|803723_803987_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_011567.1\|WP_012574456.1\|820053_820278_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NC_011567.1\|WP_012574451.1\|811933_812734_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225806

Protein	Function_ID	Function_description	E-value
NC_011567.1\|WP_080513057.1\|817799_818165_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	1.35158e-62
NC_011567.1\|WP_041638066.1\|819568_819895_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.10273e-18
NC_011567.1\|WP_012574452.1\|816990_817752_+\|DUF4405-domain-containing-protein	gnl\|CDD\|379580	pfam14358, DUF4405, Domain of unknown function (DUF4405). This presumed domain is functionally uncharacterized. This domain family is found in bacteria and archaea, and is approximately 50 amino acids in length. There are two conserved histidines that may be functionally important. This family is N-terminally truncated compared to other members of the clan.	2.07241e-09
NC_011567.1\|WP_041638065.1\|800049_802227_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.1283e-67
NC_011567.1\|WP_012574461.1\|821322_823620_+\|primase-C-terminal-domain-containing-protein	gnl\|CDD\|235927	PRK07078, PRK07078, hypothetical protein; Validated.	4.51463e-131
NC_011567.1\|WP_012574453.1\|818211_818709_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	6.51866e-08
NC_011567.1\|WP_012574454.1\|818808_819567_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	1.80494e-20
NC_011567.1\|WP_012574448.1\|802738_803722_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.55045e-167
NC_011567.1\|WP_012574444.1\|798446_799334_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.02304e-58
NC_011567.1\|WP_041638064.1\|795949_796678_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.64671e-24
NC_011567.1\|WP_012574443.1\|796674_798450_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.42556e-10
NC_011567.1\|WP_012574447.1\|802241_802739_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	7.77109e-60
NC_011567.1\|WP_012574445.1\|799336_800038_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.05958e-33
NC_011567.1\|WP_012574449.1\|803723_803987_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.83756e-29
NC_011567.1\|WP_012574456.1\|820053_820278_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.03319e-17
NC_011567.1\|WP_012574451.1\|811933_812734_+\|AAA-family-ATPase	gnl\|CDD\|225806	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].	3.69142e-37

>NC_011567.1|WP_012574451.1|811933_812734_+|AAA-family-ATPase
MYKTFYSLSREPFSKDTNPSEAYRGSSYEETLHALDYVKRTKGIGLLTGEPGAGKTFALRTFKESLNPSLYHVVYFPLSTGGVMDFYRGLALGLGEEPKYRKVDLFYQIQQGIERMYQERRITPVILLDEMHLAKDAFLQDIAILFNFHMDSTNPFVLILAGLPHLQIRLRLNHHRPLQQRIIMRYRMGALSKEEVAAYIEQRMKQAGAKHSIFTPAALEAIALQSQGWPRVINTLTTTCLLYGYQLKKDVIDEEIVRMAVEETGA
>NC_011567.1|WP_012574450.1|809988_810552_+|hypothetical-protein
MIQLYDFGIDVQTYANRGKQNAFPFIHRCPHCQAKRNLYRHGYYERNALVGQDAYRIWVARYRCAICKKTVSVLPTFLLPYFQYTIWTIIHWLKERLSSLLGKGKGSSKFFPLRQGVDVYMHRFLAHLPWLRWFFQTKGKQIPRLSDEPLVQAQEWIQHLEGDGLEKLIEAMWKEQSTHFLANRFGA
>NC_011567.1|WP_012574449.1|803723_803987_+|CRISPR-associated-endonuclease-Cas2
MFVIITYDVGEKRVNKVCKKLREYLTWTQNSVFEGEITKSLLMKCLNEIDQIIDEDEDSIYIYEVANPKNIKKQVFGQEKNFDELFL
>NC_011567.1|WP_012574448.1|802738_803722_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MLRDHYIFSNGRLKRKDNTLYFFDEEENKKSLPVHQTDNLYVFGEIDLNSSLLNLLSQHDVHLHVFNYYGFYAGTFCPRNKKVSGFTVVQQSAHYLDLEKRLYMAKAFLQSAVHHMLRNIRRYKEKTEQYVQVIEEEAKKMDSATTVQELMGIEGRIRQHYYQSFNAILKQDFIFEKRTKQPPQDPLNALISFGNSLCYTAVLSEIYKTQLDPTISFLHEPSTKRFSLCLDLAEIFKPLIVDVVIISCINNRIITQKHFDFLDGMVLLNEEGKKRFIKEWDEKLSTTVQHRKLKRKVSYRYFIRLECYKLIKHFIGDEPYKPLKAWW
>NC_011567.1|WP_012574447.1|802241_802739_+|CRISPR-associated-protein-Cas4
MVSGVQMQYYKVCKRKLWLFSKGIAMEDEHERVIEGKILHERAYPRLEDREILVDDSFKLDALDGEYIREVKLSSKMSEADRFQMLYYLYELKKRGVQKKGLISYTKERKTEEIELTEKDEVAIEKAIKEIYAIVHSASPPKLKKLPYCTKCAYYEFCFALEGDD
>NC_011567.1|WP_041638065.1|800049_802227_+|CRISPR-associated-helicase/endonuclease-Cas3
MVFYAKSEGKETIREHTDRLLYNLNLLKNSYSNKFTLMDEKMWKLLEIAVQYHDVGKANTVFQNKIRQAIRESMLETDIETDVPHNYLSVGCIPLKQLDLTKEEERLLIHGVGYHHEREQLPEKEMIRQVLENDIKKQLPQLSEHMRLPMTEKFSYRFVDRLLNRYTYHDGEEFWKYVMIKGLLHRLDHAASAHIDVESDVEKSIYINVNEYMKKQGFHKNDLQQFAEQHHDKHVIAIAQTGMGKTEAALLWIQHDKAFFTLPLRVSINAIYDRIKEKMGYDAVGLLHSTSVHYLVDKEENWEELKQQSEHYAKKLLLTTIDQILKFPFYYKGFEKELSAMANAKVVIDEIQAYEPRIAAMLIKSLEMIHRVGGKFMIMTATLPTLYLEELKQRNVINDDQIAIEEFIDTSVNRHRIRLRSEGIEEAIGEVLELGETSQVLVIVNTVRQAMSLYDKFLDCDTQVPIYLLHSQFTQEDRQLLEKHIKQFNEDNERGIWITTQLVEASIDIDFDYLFTEMSTLDSLFQRFGRCYRKRELDHDNCNIHIFTENISGIPRVYNEHLVNESIRLLEPYDHQIVDERAKVEMVKQLYDRKQLKGTSFLKEFEDALYMFDNLDPYGMDKRKAQQKLRDIQNIQIITRQMYDQIEHLFERYKEEKEWKKRLKLRMEIEKKTVSVQRYIAEKYVSERLPKPFDHIYIAEVEYDFNRERLKGKGILLDKPSSNQH
>NC_011567.1|WP_012574445.1|799336_800038_+|type-I-B-CRISPR-associated-protein-Cas5
MKALRLKLFQETACYKKPFASKVAETYPLPPYSTVKGMIHALLNADQFIPMRLSVQGTYEEKLLDYQRYYFFKKKELSSFPLVLDGLARMEFSYDKNEITTMPMYTHLLHNVHLLIHIEAEQHILKQIIHAIEYSMTHYSLGRWEDLVRIDEYKLVDVQELEEEKTLQWNAYIPSNFLDRETKSIPYQLNWKYEIVNGIRQWEKINVGYVQKEIEAPEGVWIDEDGELVFYHL
>NC_011567.1|WP_012574444.1|798446_799334_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKKALTMTVIFQANSLNYGEGIANISELKKFHRGDGEVYTYASRQSIRYDIVRLGNELFGWNLDTVDKASGVVQFKKDVTINDSVEMDLFGYLKTDKNSQKRPAVVRLSHAISLEPYKSDLEFLNNMGLASRIGQDANLANIEQHHSFYTYTLTIDLNRVGVDGEIELPNEEKANRVLQLLEVLKVLNRNIRGRQENLAPLFVIGGMYHVANPFFLGRVQLSTTANGWAVQTKPIKETMEQTFAGEAIGKDTRIGILSGVFANEGEFYDLFNEQVMTVEPFFQYVSKQIQSYYGV
>NC_011567.1|WP_012574443.1|796674_798450_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKVKLHMGEWMINMGLVGLYRVFEYGRKNGIISDEYKDSVTVKPWGIELDTDVLPQLPKAYFLYLLEEYSIARRECERLDSYIEQVKKEENFKNVVSSIKKSINDTGKKVLKYFPYPSLEDVLEKLKDVKKAEHVSQLIGYINEFKTIINDQKVNEKLTLNYFKPAILRSFFGQVSFLNVAKNNLDFDGHIEEFYKSYIVPVLNDLIFEQAIETSRSSEEMNAFLETHNDYQPFKQLKREVRKKTIEEIREYVRTNINKCLLFNERVAFYNFEEMVFSPIGVAKDNAFNFSWHFDSQQPKPLSSLAKLVLLFAPIGSTIYYKSEGINEQTERRLYAGFVQTDATFAEILQKNNHFSQLKKKREPFNKIVSQLVQSVKKESEYTVDHLFFLEFFSDYDSKKTHLHYYHLPMYLAHYFKQHADKLDYIKPYDYREQFVQYVLRGADPVYVIYNYLRDCIKNERGTIGPYIAVQERHRILQFKKGVRDMSTTDKRVSALFMQGREIREAIIRSSSSEKKVTSIAYRLLNAAKAGNRKNFMDTLLRIYMSADRPISPIFLNALHERDLDFATVANAFIAGLLANQYKEEQEEVQA
>NC_011567.1|WP_041638064.1|795949_796678_+|CRISPR-associated-endoribonuclease-Cas6
MRIICSFEVKKIPLHYRMMIVSILKESIRASSEEYYERLYAQENATKPFVFSPFLKNFRFKGDEIELDELRVIISSPDYEFLLHVYNGLQSKKRFEYKGYELIRRKTVMGDEKKITSSTVVFRTLSPLLVEDENKSPIAPDDKNYEKHINYLADTILYEYRGTGLCRPLTIRPIRFKKMVIKESNRQFTEKYGEEQHLYFTAYHGLFKVSGDPVDLQLIYQLGLSKRRNQGFGMLEVEEVKG
>NC_011567.1|WP_012574452.1|816990_817752_+|DUF4405-domain-containing-protein
MLKKNIVKIILDISMAITFVLLMNPRVFNGLPFHEVAGLVIGVAVLVHIGLNYQWVVHTVKKIFDRSFSGKTRFSFLLNVLLLLSMTGIIVTGILISKVVFPHLLGGENHALREIHDVFSKLTLLLVGVHIALHWQWIMGVFRKMLKTKEGKWRKGAVVAFVFVLAMFIGSMQWLATNVKPDEAFQPKFEQKVAQASGTFSPPEKFRERRHEEHHGNSHPLLVILGHFTFWAVVIVAVYYIEKRMRHKRQVRV
>NC_011567.1|WP_080513057.1|817799_818165_-|sigma-70-family-RNA-polymerase-sigma-factor
MHLRSLKKTRKDVSLHDPIGQDRDGNEISLLDVLKSEDEDISDMIEKNNELENIAQHLHVLDDRERQVIISRFGLNMQPERTQREIAKELGISRSYVSRIEKRALMKLFHECYKHEKGKKE
>NC_011567.1|WP_012574453.1|818211_818709_-|ImmA/IrrE-family-metallo-endopeptidase
MYLYKPCDLEKRISEAYQQNGIIYPSQLDEEYIARKFDILLVESKFGSFAEYCDDLKIVALHHDLDSLKRREVFFHEIGHLFLHVGDQSKMTESFRFFQESQAKRFTLFAAIPYHMLTYIDFSKKRDFIIYEMQETFRVPPKICESRLDYIENKVLSTKLEAACL
>NC_011567.1|WP_012574454.1|818808_819567_-|restriction-endonuclease
MAKKMPSRRERQNAVISLFTFPAVIIGFYLIMKGVIGIIGLMVISLIAFFIGSWVASYVPDMRKKENKNKNPYTGLPQKTAEKKPAKASSSQKRTSQASSSQTTGKYNVRPDDVIIQLPLEELEGLEFEQLVYLYLKATGWKPIKTPETKDGGVDIVVINKTDGLKTAVQVKHYYRSKTQVTVKDIRELDSAKKNHRCIGTWFITSGTFTNAALVEADTRRMKTSDVTFVETKIIPWKEREAAKRQVAAAKK
>NC_011567.1|WP_041638066.1|819568_819895_-|helix-turn-helix-transcriptional-regulator
MISFGDRLQELRNKMKLRQEDVAKKIGVGRTTYAMYEQGKREPDYETLLKIANFFGVSVDYLLTGQDKTDNEKNLFFFDMEGLSEQEIEEIKKHIEFIKWKAKQERGN
>NC_011567.1|WP_012574456.1|820053_820278_+|helix-turn-helix-transcriptional-regulator
MREWLKKKRLDTGLTQKEIAKLVGISRSTYAMIENGERNPSVSVAKRIADALKFDWTIFFDDKCHVLCTKDCPA
>NC_011567.1|WP_148205016.1|820298_820529_+|hypothetical-protein
MQKFKQVWHSENGKYRVVGIQFTDEITPTIFVQVEGRKTSLTYNMRTKEKLPKYVVDACESIKQELTFLCNHCKSN
>NC_011567.1|WP_012574458.1|820550_820808_+|hypothetical-protein
MLKKGFYLEEIDKKNKALLCIDYMLEAIFNKDYETAEIEAKEFLAVIEMLKEIEVKKKRRAELEQLVSEMQKQGIKIDFATKVHA
>NC_011567.1|WP_012574460.1|821085_821313_+|hypothetical-protein
MFSMKKTKTKENPMEKYVPMVMRWIENTFDMSAIQVEDFSVFPAGKLIRDENGHTMVVFYDIWTEQVKYTFPSGK
>NC_011567.1|WP_012574461.1|821322_823620_+|primase-C-terminal-domain-containing-protein
MQAAIDIQAGLERLFPSAKKPLKIIRLVGYSRMNMENDPNKAYSVAKRPCMKGWQDLNRPGMTEGEIRSWLRQKGWTGLVIPDGYDVIDIDEQTEGELIFNALLREEYKFHAIRTIRGFQFFFRSTGKIKGQDATVLMAGGFVGDYRLSGRGQVVLPSENTGGREWVHIADGELSPMPIYFERLKKIDKAQRPFPIPMHEGGRNNAMYAHCCRLVEFGYTQEQVHEIASFLNRYFFLPPLDQREFANTINSALKHEPSGTNYSSPSPMISPERKEGEQKKFNLTEMGNAERLVARNGQNLRYCVEFEEWLIWDGKTWVEDKKKKIERIAIRTFREMYAEAAKEENNDARNELLKWAKASEKSSVFLNSIARAEAMLPISQEELNKDKFLLNCANGVVDLRTGELLPHAREYMMTKNTHIPYDPNAKCPTWIAFLESIFRDGGDVKQDIINFLQKAIGYTLTGDISEQVVFFLWGTGRNGKSTFINTVKALLGDYAKQTNSNTFTAKMNDSGINNDIARLHGSRFVSAVESEDGQRLSESLIKQLTGGEPITARFLRKEFFEFVPEFKIFFTTNHKPIIKGDDEGIWRRIRLVPFTYTIPKEQVDKHLPEKLMNELPGILRWAVEGCLKWQKEGLGEPDEIKNATSEYKDEMDLLSNFLNDCCVIHPGAKVQLNELYKEYIDWCEENSEIAMKKQKFSARLVLRGFEKRKSTGNKTFFFGIGLSNESYKVTSSYSNSSKSPIGDTFTEIQENKSLEVTSNFVEEEI

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Crispr_ID: NC_011567_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_011567_4

1638884-1638968

Orphan

Consensus_repeat	Method
TTTTCCCCGCTACCGTTTAGGCAGGGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_011567_4

>merge|NC_011567|4|1638884-1638968|CRISPRCasFinder
TTTTCCCCGCTACCGTTTAGGCAGGGCTGATAGCACAAAAGTTCGGCAAGATAGCTTTTCCCCGCTACCGTTTAGGCAGGGCTGA

>NC_011567|4|4|1638884-1638968|CRISPRCasFinder
TTTTCCCCGCTACCGTTTAGGCAGGGCTGA	TAGCACAAAAGTTCGGCAAGATAGC
TTTTCCCCGCTACCGTTTAGGCAGGGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NC_011567.1\|WP_012575219.1\|1624158_1624653_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350305
NC_011567.1\|WP_041638507.1\|1650986_1651361_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NC_011567.1\|WP_012575232.1\|1640630_1641077_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NC_011567.1\|WP_041638492.1\|1625026_1625335_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225511
NC_011567.1\|WP_012575227.1\|1634652_1635012_-\|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|212144
NC_011567.1\|WP_041638501.1\|1641475_1643179_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NC_011567.1\|WP_012575236.1\|1647241_1648357_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_011567.1\|WP_041638505.1\|1648387_1649050_-\|DUF975-family-protein	unknown	unknown	gnl\|CDD\|283754
NC_011567.1\|WP_041638499.1\|1635334_1636189_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|273806
NC_011567.1\|WP_012575224.1\|1628809_1630120_-\|DUF3895-domain-containing-protein	unknown	unknown	gnl\|CDD\|372438
NC_011567.1\|WP_012575222.1\|1626447_1628415_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NC_011567.1\|WP_167316069.1\|1643269_1643443_-\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012575033.1\|1637547_1638078_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379282
NC_011567.1\|WP_012575032.1\|1637017_1637530_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NC_011567.1\|WP_012574977.1\|1649334_1650564_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NC_011567.1\|WP_167316068.1\|1639537_1639687_-\|hypothetical-protein	unknown	unknown	unknown
NC_011567.1\|WP_012575225.1\|1630307_1632017_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226121
NC_011567.1\|WP_012575226.1\|1632667_1634617_-\|DUF2075-domain-containing-protein	unknown	unknown	gnl\|CDD\|378274
NC_011567.1\|WP_041638504.1\|1645296_1646745_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NC_011567.1\|WP_041638502.1\|1643533_1645024_-\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591

Protein	Function_ID	Function_description	E-value
NC_011567.1\|WP_012575219.1\|1624158_1624653_+\|PIN-domain-containing-protein	gnl\|CDD\|350305	cd18738, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.46308e-17
NC_011567.1\|WP_041638507.1\|1650986_1651361_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	7.12618e-06
NC_011567.1\|WP_012575232.1\|1640630_1641077_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	5.625e-15
NC_011567.1\|WP_041638492.1\|1625026_1625335_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.30005e-07
NC_011567.1\|WP_012575227.1\|1634652_1635012_-\|nucleotide-pyrophosphohydrolase	gnl\|CDD\|212144	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in mouse RS21-C6 protein and its homologs. RS21-C6 proteins, highly expressed in all vertebrate genomes and green plants, act as house-cleaning enzymes, removing 5-methyl dCTP (m5dCTP) in order to prevent gene silencing. They show significant sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, RS21-C6 contains a single MazG-like domain and functions as a tetramer (a dimer of dimers) with a typical four-helical bundle. Divalent ions, such as Mg2+, are required for its pyrophosphatase activity. This family also includes a pyrophosphatase from Archaeoglobus fulgidus (Af1178). Although its biological role remains unclear, Af1178 shows significant sequence similarity to the mouse RS21-C6 protein.	1.11235e-39
NC_011567.1\|WP_041638501.1\|1641475_1643179_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NC_011567.1\|WP_012575236.1\|1647241_1648357_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	4.33231e-55
NC_011567.1\|WP_041638505.1\|1648387_1649050_-\|DUF975-family-protein	gnl\|CDD\|283754	pfam06161, DUF975, Protein of unknown function (DUF975). Family of uncharacterized bacterial proteins.	5.84886e-25
NC_011567.1\|WP_041638499.1\|1635334_1636189_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	1.08782e-06
NC_011567.1\|WP_012575224.1\|1628809_1630120_-\|DUF3895-domain-containing-protein	gnl\|CDD\|372438	pfam13034, DUF3895, Protein of unknown function (DUF3895). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 110 amino acids in length. There are two completely conserved residues (Y and L) that may be functionally important.	7.08968e-35
NC_011567.1\|WP_012575222.1\|1626447_1628415_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	2.13479e-27
NC_011567.1\|WP_012575033.1\|1637547_1638078_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|379282	pfam13592, HTH_33, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	4.10103e-13
NC_011567.1\|WP_012575032.1\|1637017_1637530_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.60982e-37
NC_011567.1\|WP_012574977.1\|1649334_1650564_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.24188e-29
NC_011567.1\|WP_012575225.1\|1630307_1632017_-\|AAA-family-ATPase	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	2.51712e-20
NC_011567.1\|WP_012575226.1\|1632667_1634617_-\|DUF2075-domain-containing-protein	gnl\|CDD\|378274	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075). This domain, found in various prokaryotic proteins (including putative ATP/GTP binding proteins), has no known function.	4.08064e-123
NC_011567.1\|WP_041638504.1\|1645296_1646745_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	4.75163e-70
NC_011567.1\|WP_041638502.1\|1643533_1645024_-\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0

>NC_011567.1|WP_012575033.1|1637547_1638078_-|winged-helix-turn-helix-domain-containing-protein
MKRLKITDDHGWTPRTLRKQERKIKDASLRVRVTAVRLVMEGHLGKDVAKMVNLCRQSVAIYVARFNQGGLDHLLDRRLPPGRVPFLTEEQQQEIRQLVLTTTPVDAGWGIASSWNTRILQSYIQQTYGVSMSREGIRKLLHRLRLSWTRPTYKLVKGDAKRQAAFQRELEFIKKN
>NC_011567.1|WP_012575032.1|1637017_1637530_-|IS630-family-transposase
MFYVDETHVRAYQALRTTWAEVGNQKHVPSYGHHAHVSIFGAVDVQQGDVVFHRASSANAETFLDFLRRLKEKYTDRFLVLVLDNARIHHAKMVQAFLDGEEGDAFHFIFLPPYSPQLNPIERLWKWLKDEVIANVFHKDQNDIAQSITRFEQYVLQHPDEVLRRMGCAV
>NC_011567.1|WP_041638499.1|1635334_1636189_-|helix-turn-helix-domain-containing-protein
MAIDHDRLFKELLTTFFEEFILLFFPHVHEHIDFRHLSFLSEELFTDVTAGEKYRVDLLIQTKLKGEAGIIIIHVENQSYMQSSFPERMFIYFSRLFEKYRTNILPIAIFSYDFIRDEPSSFTLQFPFLHVLQFQFLAVELRKQNWRHYIRSENPIATALLSKMGYNENERVELKKQFFRMLIRQNIDEAKRRLLIGFFETYVKLTEQEEEQFQNEVKKMGGKEGEQVMELIISYEQKGKIAGAKEKEREMIQKMVEKGMSITQIAHLLDRSEEEVRKVVEMKS
>NC_011567.1|WP_012575227.1|1634652_1635012_-|nucleotide-pyrophosphohydrolase
MLENEVLILRELQRRIIEFRDERDWKKFHNPKDLAISLSIEAGELLENFQWKSSEEAIESRLENIKDELADVVIYAFLLSDALGVDLKQIVFDKIKKNEEKYPIEKSFGSTKKYNELEK
>NC_011567.1|WP_012575226.1|1632667_1634617_-|DUF2075-domain-containing-protein
MIVYEATKEEFLCDVFEDQLVQNICNNFRAKIGHVNEREIRAWDNSMQYMYRVLSDDEIPHNAGIAIEFKIPHTSKRVDFLISGLDDQQNDSVVIVELKQWDRVEKVVGKEAIVKTVMNRSMVETTHPSYQAWSYASLIRDYNENVQTEHIQLYPCAYLHNYMLKEAHDPLIDPVYQYYYIEQAPIFLKGDAAKLRSFIKRYVKYGDNKESIYKIEKGRIRPSKSLQDSLNNMLKGNREFIMIDDQKVVYETALQLASEAVRTNKKHVLIVEGGPGTGKSVLAINLLVELTNRHLVCQYVTKNAAPRKVYAQKLKQDFRKSHIDNLFTSSGSYIDTRLNELDVLIVDEAHRLNEKSGMFQNLGENQTKEIIHAAKLAIFFIDERQRVTLKDIGSVQMIEKFAVEYGAIITKTALQSQFRCNGSDGYLAWIDDVLQIRETANADYFDLQYDFRVYSDPNELRAAIEKLNEMNNKSRIVVGYCWDWIKEGKNDPNVHDIIIHEHEFYMSWNLGNSETWAIDEHSVKQAGCIHTCQGLEFDYVGVIIGDDLIYKDGKVQTDYTKRAKTDQSLKGLKKMIKENPEEALEQADDIIRNTYRTLLTRGQKGCFVYCTNKELERYLRMRFGQLERSYKESEVTQSLSIVAEEKGEY
>NC_011567.1|WP_012575225.1|1630307_1632017_-|AAA-family-ATPase
MRLIKFSVTNYKVFEKTFTIEFSKDSIVILTGRNNTGKSTILEAINCFFQKESKAKTIPSDCFSKRDKEIVLEAVFESDDENKITIVKKYKDGATPRFFDENDIEIKNNHELKDTLSKILDNKPFYITPYMLPDDINELIQNIYSEIIKNDLEKLEELNEDNELEKEMRELASEYNKIKKSYPEFLKKLKSNTDKILEQVSMDVTNHLQTLFGNDHLSLKVIGGETEGFSVNDILKSTNSRINVSSKNKPDMPLSNQGTGLQRMSLIYLIQNMIEKKMLGQNENKLLLIDEPEAFLHPEAVRALSQSLYKIGQRMPLMISTHSPILIDLSERHTSIQVFRVNEEEAIQLYKSTSDQFDEDDIKNMKILNYVDSYVNEFFFTDKIIIVEGDTEYIAFKHFAKRKNVNLHIIRARGKSTIRTLMKILNQFNADYDVLHDIDNDPKRSSSDLKKQLTNCKEIFKLKENRNVRIFCSIPNFEGAIGIGNISNAKKTQTIYKILHDEFDKEEFANARKIIESLFEQIINREEAALDGGFRQICACQDYDDLFKELISNCQEDEKESEETVGSYR
>NC_011567.1|WP_012575224.1|1628809_1630120_-|DUF3895-domain-containing-protein
MQEALYEGRLFYLKAYLDTVEDRKAELGKLKKRADKGAFQCPYCNDALILKAGDIREKHFSHRYSRSCEISEASEIYYQQTKRESKSHSVMKEIIYDELKNQEKINEDMLVDYGYIAKAKEKWRYYPDIIVKNGDDEIAITILTNVTANKDEKLVKQVRERNRYYKNKGMHTIWFVENAEMSIDIDHHVIHLWEAELDIAIKTKEDLEWENVLNHLPIEESLFKLFDYHHRKTPEKFDVRSLYYVHSTETEIVFTVHRFIVDQMEYPFRAFALNEGYQMSMSKALLTKKTIQLSDPEVEEKNRKLFKEIARQKVLEKKSRKETVIREQQQASYTPTQTARKSSFQKLSSSEQEMFPLLDELLQNSIFDYVQSASIISAKELSVYLVDKCNAPNETFSTGRYKIYGDVCKFLDYLAKQGIIQLLRKDGVNDRVYGRC
>NC_011567.1|WP_012575222.1|1626447_1628415_-|DUF262-domain-containing-protein
MKANETKLQPIIEGTKQYVLPLFQRSYSWDKKEWEVLWDDLVELCETENPRDHFIGSIVSMPTNSVPEGVAKFLLIDGQQRLTTIFVILTLLRDLAKLSGNIELADEINNTLIVNPYKKDSDYFKLLPTQVDRSAYKKMVLSEIEQNDDSQIYKAYQYFERKIKQSHIDISRLKSVISNRLSIVSIVLDPDDNPYLVFESLNAKGRPLTQADLIRNFFFMRIHIQDQEVIYNKYWRPMQDSLDENLTEFIRHYLMKDGLYVKQNEIYFSVKEIASENDILEYIKNMYVFSTHYEKLLSPDKESNREIQRALNRLNRMEATTVYPFLLNCYDDYYRGQISDTQFVQVISIIENFLVRRFVCNVPTNQLNKIFNSLYKNTKDDSFGNFIKLLKNHLQSKNYPKDNEFFSRLIDAKLYGSGERGRKTKLILESIEEFFEHKEQVDFDSLTIEHIMPQTLTQSWQEYLGEEWQLVHDLYLHTLGNLTLTGYNSELSNDDFDIKKEKLKASHLEINKYFEKVTSWKKEDIEQRAKHLAEICLKIWPYFGNERTDADVRVTGTNPKELYILGQQFEVHSWRDVLENTMNTIADLEPEKFEQIMVQFPRLVGRDPKKFRAIRQLKNGAYIEVNLSAQSIQRFCVQAIEAIELTTDDWKFITE
>NC_011567.1|WP_041638492.1|1625026_1625335_+|helix-turn-helix-domain-containing-protein
MSKKQRTYKSYSPELKMEAVQRALAGESVKVIAHHLEITDPDYIYKWIDQYEMSGEVGLKRKIRNHPEMDKDFIIRELEMENEILKKYLQILKREGKQRNSK
>NC_011567.1|WP_012575219.1|1624158_1624653_+|PIN-domain-containing-protein
MSTKVLIDTNIYTAHEMGYPDAVEFIEQLIEDEAEIIMTTLIEMEIMSHFEIETDPDIRENRKGYIQMADQIYDITEDTELAADIRRKARADSTRKKSIKAPDALVAAAALIHNAVLVSNNDKDFRWIRENYTYKDRKLNYVNLIIDKKAYGEFVKAYIESRGG
>NC_011567.1|WP_167316068.1|1639537_1639687_-|hypothetical-protein
MFKKLFTQKEKGCCDVQIIELKDDACCEEKEECCEEKDECCKDDKQTCC
>NC_011567.1|WP_012575232.1|1640630_1641077_-|winged-helix-turn-helix-transcriptional-regulator
MENVRELFHTMTKRLGLLDRNCCAVGGIELSLVQSHILYEIDRMNEPSMQQVADAIAMDITTFSRQIQTLVKMNLVKKTPYPQDRRVYILSLTPEGKYVTAKIDAEVNEYLGEVFSHMSEFERETVLRSIRLLNECMAKSSVCCKPLF
>NC_011567.1|WP_041638501.1|1641475_1643179_+|phosphomethylpyrimidine-synthase-ThiC
MNHLFSQMHFPASKKVYVQGTREDIRVPMREIQLTPTKTETFIRENEPIRVYDTSGSYTDPLFQPNIHKGLPKLRKKWIEERGDVEEYDGQAPKAKLPFQHRPLRSKRGKTVTQMHYAKRGIITPEMEFVAIREQMDPEFVRQEVAAGRAIIPSNINHPESEPMIIGNKFHVKINANIGNSAVTSSMEEEVEKMLWAIRWGADTIMDLSTGKYIHETREYIIRNSPVPVGTVPIYQALEKVNGVVERLSWDIYKETLIEQAEQGVDYFTIHAGVLLRYIPLTINRTTGIVSRGGSIMAQWCLAHHEENFLYTHFEEICEILKTYDIAISLGDGLRPGSIADANDEAQFAELQTLGELTNIAWEHDVQVMIEGPGHIPMHKIKENVDKQIEICHGAPFYTLGPITTDIAPGYDHITSAIGAAIIGAYGTAMLCYVTPKEHLGLPNKEDVREGVIAYKIAAHAADLAKGHPGAQKRDDALSKARFEFRWNDQFNLSLDPERAREYHDETLPAEGAKLAHFCSMCGPKFCSMNISHQLQKTLRDEGMKEKSKQFMEQGKSLYTNAVQVEH
>NC_011567.1|WP_167316069.1|1643269_1643443_-|hypothetical-protein
MGYLCLIVLPIVAVFWFFNLAQLLETLHQKREVHNEAVLGTVMTMIFFFNVSMAWVL
>NC_011567.1|WP_041638502.1|1643533_1645024_-|malate:quinone-oxidoreductase
MKTDVILIGAGIMSATLGTLLKELAPEWEITVFERLDQPADESSNEWNNAGTGHAALCELNYTVEKADGSIDVSKAIKINEQFQESLQFWSYLVQNKHIRNPKDFVMPIPHMSFVQGEENVAFLKKRFEQMVHNPLFKGMEFSDDPQKLKEWIPLMMEDRIVTEPIAATRIETGTDVNFGALTRMLFEHLEHKHVNLYYKHHVEDMKRTSDNLWEVKVRNLTTGEVEIHTAKFVFIGAGGGSLHLLQKSGIPEGKGIGGFPVSGLFMVCNNPDIIAQHHAKVYGKAKVGAPPMSVPHLDTRFIDGKKMLLFGPFAGFSPKFLKNGSLFDLITSVKPHNVLTMLAAGAKNMALTKYLIEQVMLSKEQRMEELREFIPHAKSEDWDVIIAGQRVQVIKDTEAGGKGTLQFGTEVVAAHDGSVAALLGASPGASTAVHVMLEVIEKCFPNEMKQWEAKIKEMIPSYGVSLMKNEALLRDVQTLAAETLGLTENMPLQIA
>NC_011567.1|WP_041638504.1|1645296_1646745_+|IS66-family-transposase
MLTVQQAVFTVESLMGKVQQQKQLIHQLIQENEHLRQENKQLRKENEQLTYRVQELEARTKKNSSNSHLPPSSDRFEKKRSSREPSGKKPGGQEGHEGTTLCQVEHPHHRVVHRVHTCQGCGASLRDVKPFKVDIRQVFDLPPVTMEVTQHEREVKSCPHCRCVQQAEFPSHVTNHVQYGPRLTALVVYLYNIQMIPYQRLRDMIEELYQHPISTGTLVNMVKRGREALEPNMDIIEEALLSSDILHVDETSLRIDGKQAWVHVACTSAYTYLAPHASRGKKATDEIGILPQYKGTMMHDAFGTYPRYTKATHALCHAHHLRDLKGFTEQGHTWAKRMTTFLLSAKQVVEQHGGFLPEEEAKRWERVYDRILAKAQHRLEGMTPLPKKALSFIRRLQKRKEEALRFLREAHVPFDNNQAERDLRMVKVKENISGTFRQETFAQSFCIARSIVSTLTKHEKNVWDSLCLLLTGETIDRVLSAT
>NC_011567.1|WP_012575236.1|1647241_1648357_+|GGDEF-domain-containing-protein
MKEMKQDHDHLLKTAAQINTKRLYKFNWTLSIIIVIYFLFSFIAKREVDSYAVYYYNLFLLILFANVCFGMLLFYINKQEAERTKASCVIQMTYLCLHLLVAVWLSKHDPHMQPLWIACIGIGVLFLIPPFAGIFMYLLTWIASSIVLSPYDEFARMEWPIRPSIHTALPEGLGFVASIIIWRSYTKNYKQHMLMDIEQTRLIEKNNSLQALAIQDPLTGLLNRTRFVDLVRVQLHKQNNKEASILIIDIDFFKHVNDQFGHPAGDQVLKDLSAMLMHYFPPPSLSARLGGEEFIIFLPNTHIEQARQLAEMLRGNIATFPFSYKHHTIHITASFGIAQATDSFQHSYSKADQALYIAKQNGRNRVVVIST
>NC_011567.1|WP_041638505.1|1648387_1649050_-|DUF975-family-protein
MTLSLLRREAREALKGKWGSAVLLMLVYAFVTIVFPMVVEVVLSGGWDVWIEQENVPTSVSIVSLLLSLALIPFSVVVYWVFLDVYRHEPVRISPMFTVYQNGKLSLKLIGTSISFGIFVFLWSLLLIIPGIIKSLSYSQTFFLLKDHPEYGALQAISESKKRMKGYKGKLFLLYLSFIGWGLLSILTFGIGLLWLVPYVYTSLAAFYDQFIRTQEAPVE
>NC_011567.1|WP_012574977.1|1649334_1650564_-|IS110-family-transposase
MKLYVGIDVSSTDLYTCIMDQEGNTCAQFKADNHLLGATFLRDQVLLWANKLQPSEILIGMEATSVYSWHPAMFFHQQEELKSWNVKVFTINPKLIRKFKEAYTDLDKTDGIDAWIIADRLRFGRLKVTAVMQEQFIALQRLTRMRYHLVHQLTREKQYFLQHLFYKCSSFTQEVDSSVFGHAILELLLESFSLDEISQADVQQLADFLRQKGRNRFADPECIAKSIQKAARSSYRLSKCVEDSIDLLLGLSIQSIRSLQAQIKELDKAITRHLEGIPNTLQTIPGIGPVYAAGILAEIGQIERFDNQAALAKYAGLTWSKHQSGRFQAEETSLIRSGNRYLRYYLVEAANSVQRHDASFRAYYRKKYEEVPKHQHKRALVLTARKLVRVIDALLRNGQIYTPRKGEDR
>NC_011567.1|WP_041638507.1|1650986_1651361_+|zinc-ribbon-domain-containing-protein
MKSIKPGRGPSIQGFIGSIATILFGMFWTFMTFSITKDSPIPGSQIFPFFGFVIIGIGIFQAVYHYKNATGKERMSIVDIVEENEEKDPLNTRFGHIEGEKFCPHCGTNVQANFRFCPSCGKAL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_011567_3	3.11\|813606\|37\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	813606-813642	37	AB823818	Phage phi OH2 DNA, complete genome	13878-13914	0	1.0
NC_011567_3	3.18\|814063\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	814063-814098	36	AB823818	Phage phi OH2 DNA, complete genome	14331-14366	1	0.972
NC_011567_3	3.43\|815720\|38\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	815720-815757	38	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	193919-193956	1	0.974
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	MG945186	UNVERIFIED: Microviridae sp. isolate 625-1801, complete genome	1563-1586	2	0.917
NC_011567_3	3.6\|813276\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	813276-813311	36	AB823818	Phage phi OH2 DNA, complete genome	9118-9153	2	0.944
NC_011567_3	3.18\|814063\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	814063-814098	36	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	196768-196803	2	0.944
NC_011567_3	3.30\|814856\|35\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	814856-814890	35	NC_019544	Deep-sea thermophilic phage D6E, complete genome	1337-1371	2	0.943
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_013164	Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence	60800-60823	3	0.875
NC_011567_2	2.30\|806109\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	806109-806144	36	NC_019544	Deep-sea thermophilic phage D6E, complete genome	56-91	3	0.917
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NZ_CP007649	Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence	68557-68580	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NZ_CP007649	Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence	74334-74357	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	MN340231	Escherichia phage phiv205-1, complete genome	40678-40701	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	CP000711	Enterobacteria phage CUS-3, complete genome	37287-37310	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NZ_CP039495	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence	17930-17953	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	JQ182733	Enterobacterial phage mEp213, complete genome	27839-27862	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019714	Enterobacteria phage HK446, complete genome	24066-24089	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_002166	Bacteriophage HK022, complete genome	25165-25188	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	AF069529	Bacteriophage HK97, complete genome	24047-24070	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_002167	Enterobacteria phage HK97, complete genome	24047-24070	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019715	Enterobacterial phage mEp234, complete genome	23258-23281	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	JQ086374	Enterobacteria phage HK544, complete genome	24107-24130	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	JQ806764	Salmonella phage vB_SosS_Oslo, complete genome	31194-31217	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	MH370364	Salmonella phage S107, complete genome	33558-33581	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019769	Enterobacteria phage HK542, complete genome	23287-23310	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019768	Enterobacteria phage HK106, complete genome	26493-26516	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019706	Enterobacteria phage mEp043 c-1, complete genome	27839-27862	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	AF069308	Escherichia virus HK022, complete genome	25165-25188	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	NC_019719	Enterobacteria phage HK633, complete genome	25539-25562	4	0.833
NC_011567_1	1.1\|293858\|24\|NC_011567\|PILER-CR	293858-293881	24	KJ832078	Enterobacteria phage Sf101, complete genome	22950-22973	4	0.833
NC_011567_3	3.12\|813672\|35\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	813672-813706	35	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	191181-191215	5	0.857
NC_011567_3	3.50\|816181\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	816181-816216	36	MG945182	UNVERIFIED: Microviridae sp. isolate 568-1602, complete genome	5902-5937	5	0.861
NC_011567_2	2.50\|807434\|37\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807434-807470	37	NC_022994	Geobacillus sp. 1121 plasmid pGTG5, complete sequence	323-359	6	0.838
NC_011567_3	3.13\|813736\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	813736-813771	36	NC_022994	Geobacillus sp. 1121 plasmid pGTG5, complete sequence	1345-1380	6	0.833
NC_011567_2	2.34\|806375\|38\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	806375-806412	38	NZ_LT667504	Buchnera aphidicola (Cinara confinis) strain BCiconfinis isolate 2801 plasmid pLeuTrp	2623-2660	7	0.816
NC_011567_2	2.80\|809424\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	809424-809459	36	MN694114	Marine virus AFVG_250M252, complete genome	5471-5506	7	0.806
NC_011567_2	2.4\|804403\|37\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	804403-804439	37	NZ_CP042047	Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence	10936-10972	8	0.784
NC_011567_2	2.69\|808699\|37\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	808699-808735	37	NC_004980	Lactococcus lactis plasmid pWC1, complete sequence	1535-1571	8	0.784
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	HQ316603	Cyanophage S-SSM6b genomic sequence	116287-116320	9	0.735
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	NC_020875	Cyanophage S-SSM4 genomic sequence	148307-148340	9	0.735
NC_011567_2	2.34\|806375\|38\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	806375-806412	38	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	873698-873735	10	0.737
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	MN694000	Marine virus AFVG_250M989, complete genome	29141-29174	10	0.706
NC_011567_2	2.80\|809424\|36\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	809424-809459	36	MK494099	Mycobacterium phage Typha, complete genome	716-751	10	0.722
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	KX119195	Helicobacter phage FrGC43A, complete genome	3181-3214	11	0.676
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	KX119178	Helicobacter phage Pt5303G genomic sequence	3189-3222	11	0.676
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	KX119192	Helicobacter phage Pt1918U, complete genome	3181-3214	11	0.676
NC_011567_2	2.49\|807371\|34\|NC_011567\|PILER-CR,CRISPRCasFinder,CRT	807371-807404	34	KX119191	Helicobacter phage Pt4497U, complete genome	3416-3449	11	0.676

1. spacer 3.11|813606|37|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aggagaaacagaagtggaaagcatcgttcattcctat	CRISPR spacer
aggagaaacagaagtggaaagcatcgttcattcctat	Protospacer
*************************************

2. spacer 3.18|814063|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 1, identity: 0.972

tgtcaccccttacgctttcttgtgcacgtaaatggc	CRISPR spacer
tgtcaccccttacgcttttttgtgcacgtaaatggc	Protospacer
******************.*****************

3. spacer 3.43|815720|38|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 1, identity: 0.974

agacttccgcaaaaacaaaatcattcgtgaaatggaca	CRISPR spacer
agacttccgcaaaaacaaaatcattcgcgaaatggaca	Protospacer
***************************.**********

4. spacer 1.1|293858|24|NC_011567|PILER-CR matches to MG945186 (UNVERIFIED: Microviridae sp. isolate 625-1801, complete genome) position: , mismatch: 2, identity: 0.917

catccatcctttcttttttgtctc	CRISPR spacer
cttccatcctttcttttttctctc	Protospacer
* ***************** ****

5. spacer 3.6|813276|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to AB823818 (Phage phi OH2 DNA, complete genome) position: , mismatch: 2, identity: 0.944

ttgataaacacgttaacaaaaaacatcgcatgttcc	CRISPR spacer
ttaataaacacgttgacaaaaaacatcgcatgttcc	Protospacer
**.***********.*********************

6. spacer 3.18|814063|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 2, identity: 0.944

tgtcaccccttacgctttcttgtgcacgtaaatggc	CRISPR spacer
cgtcaccccttacgcttttttgtgcacgtaaatggc	Protospacer
.*****************.*****************

7. spacer 3.30|814856|35|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_019544 (Deep-sea thermophilic phage D6E, complete genome) position: , mismatch: 2, identity: 0.943

tccaccgaacaacgagcggttgcttggttgacaaa	CRISPR spacer
tcgacggaacaacgagcggttgcttggttgacaaa	Protospacer
** ** *****************************

8. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_013164 (Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence) position: , mismatch: 3, identity: 0.875

catccatcctttcttttttgtctc	CRISPR spacer
catccctcctttcttttttttctg	Protospacer
***** ************* ***

9. spacer 2.30|806109|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_019544 (Deep-sea thermophilic phage D6E, complete genome) position: , mismatch: 3, identity: 0.917

gcggtggagaaatgaaactaaaggacatcgccgctc	CRISPR spacer
gcggcggagaaatgaaactaaaggacattgccgcta	Protospacer
****.***********************.******

10. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NZ_CP007649 (Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tatcaatcctttcttttttgtcat	Protospacer
.*** ***************** .

11. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NZ_CP007649 (Lactobacillus salivarius strain JCM1046 plasmid pLMP1046, complete sequence) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tatcaatcctttcttttttgtcat	Protospacer
.*** ***************** .

12. spacer 1.1|293858|24|NC_011567|PILER-CR matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

13. spacer 1.1|293858|24|NC_011567|PILER-CR matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

14. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

15. spacer 1.1|293858|24|NC_011567|PILER-CR matches to JQ182733 (Enterobacterial phage mEp213, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

16. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019714 (Enterobacteria phage HK446, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

17. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_002166 (Bacteriophage HK022, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

18. spacer 1.1|293858|24|NC_011567|PILER-CR matches to AF069529 (Bacteriophage HK97, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

19. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_002167 (Enterobacteria phage HK97, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

20. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019715 (Enterobacterial phage mEp234, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

21. spacer 1.1|293858|24|NC_011567|PILER-CR matches to JQ086374 (Enterobacteria phage HK544, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

22. spacer 1.1|293858|24|NC_011567|PILER-CR matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

23. spacer 1.1|293858|24|NC_011567|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

24. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019769 (Enterobacteria phage HK542, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

25. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019768 (Enterobacteria phage HK106, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

26. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019706 (Enterobacteria phage mEp043 c-1, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

27. spacer 1.1|293858|24|NC_011567|PILER-CR matches to AF069308 (Escherichia virus HK022, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

28. spacer 1.1|293858|24|NC_011567|PILER-CR matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

29. spacer 1.1|293858|24|NC_011567|PILER-CR matches to KJ832078 (Enterobacteria phage Sf101, complete genome) position: , mismatch: 4, identity: 0.833

catccatcctttcttttttgtctc	CRISPR spacer
tgtccattctttcttttttgtctg	Protospacer
..*****.***************

30. spacer 3.12|813672|35|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 5, identity: 0.857

aatgaacgctcctaaacttgcgaataaacctgtaa	CRISPR spacer
aatgaacgctcctaaactagcgaataatcctacga	Protospacer
****************** ******** ***...*

31. spacer 3.50|816181|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to MG945182 (UNVERIFIED: Microviridae sp. isolate 568-1602, complete genome) position: , mismatch: 5, identity: 0.861

---caaacagaaagttttttggttctttttttcaaaaaa	CRISPR spacer
gtttata---aaagttttttggttctttttttcaaaaaa	Protospacer
   .* *   *****************************

32. spacer 2.50|807434|37|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_022994 (Geobacillus sp. 1121 plasmid pGTG5, complete sequence) position: , mismatch: 6, identity: 0.838

-cccagtgatcaaggcacgttcgcttcgctcacttaac	CRISPR spacer
acccagc-atcaaggcacgttcgctgcgctcactttcg	Protospacer
 *****. ***************** *********

33. spacer 3.13|813736|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_022994 (Geobacillus sp. 1121 plasmid pGTG5, complete sequence) position: , mismatch: 6, identity: 0.833

ttttttcgtctgacgaatattttttcgtatatacgt	CRISPR spacer
tattttcgtcagacgaatattttttcgtataaaatg	Protospacer
* ******** ******************** *

34. spacer 2.34|806375|38|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT667504 (Buchnera aphidicola (Cinara confinis) strain BCiconfinis isolate 2801 plasmid pLeuTrp) position: , mismatch: 7, identity: 0.816

-tattgacgctattttttaaaaattaaactgatttcatt	CRISPR spacer
ttattttcatt-ttttttaaaaattaaacgcatttcatt	Protospacer
 ****  *..* *****************  ********

35. spacer 2.80|809424|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to MN694114 (Marine virus AFVG_250M252, complete genome) position: , mismatch: 7, identity: 0.806

atggattga---cgacattggggaagaacttgtgattga	CRISPR spacer
---gattagtcccgacattgcggaggaacttgtgattga	Protospacer
   ****..   ******** ***.**************

36. spacer 2.4|804403|37|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042047 (Staphylococcus aureus strain B2-7A plasmid pSALNBL75, complete sequence) position: , mismatch: 8, identity: 0.784

agcgaaaaagaaggaagaaattattgtagcactcaat	CRISPR spacer
agatcaaaagaaggaatatattattgtagcatttatt	Protospacer
**   *********** * ************.*.* *

37. spacer 2.69|808699|37|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_004980 (Lactococcus lactis plasmid pWC1, complete sequence) position: , mismatch: 8, identity: 0.784

atcacccacattttcacgttttacttggcgttaaacc	CRISPR spacer
atcaccctcatattcacgttttactttttattagtcc	Protospacer
******* *** **************  ..***. **

38. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to HQ316603 (Cyanophage S-SSM6b genomic sequence) position: , mismatch: 9, identity: 0.735

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
cgatcaaccctcatcttttttccattcctttttt	Protospacer
 * *. . *************** *****.***.

39. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_020875 (Cyanophage S-SSM4 genomic sequence) position: , mismatch: 9, identity: 0.735

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
cgatcaaccctcatcttttttccattcctttttt	Protospacer
 * *. . *************** *****.***.

40. spacer 2.34|806375|38|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.737

-tattgacgctattttttaaaaattaaactgatttcatt	CRISPR spacer
acactaa-aatatattttaaaaataaaactgatttcaaa	Protospacer
 .*.*.* . *** ********** ************

41. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to MN694000 (Marine virus AFVG_250M989, complete genome) position: , mismatch: 10, identity: 0.706

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
tatagtaggctcatcttttttctcttcatctttt	Protospacer
 .*  *.. *************.**** *****.

42. spacer 2.80|809424|36|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to MK494099 (Mycobacterium phage Typha, complete genome) position: , mismatch: 10, identity: 0.722

---atggattgacgacattggggaagaacttgtgattga	CRISPR spacer
tgcgcaggt---cgatcttggggaagaacttgtgattgt	Protospacer
   ...*.*   ***. *********************

43. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to KX119195 (Helicobacter phage FrGC43A, complete genome) position: , mismatch: 11, identity: 0.676

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
ccatgctgtctcatctttattccctttctctttt	Protospacer
   * . ..********* *******.******.

44. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to KX119178 (Helicobacter phage Pt5303G genomic sequence) position: , mismatch: 11, identity: 0.676

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
ccatgctgtctcatctttattccctttctctttt	Protospacer
   * . ..********* *******.******.

45. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to KX119192 (Helicobacter phage Pt1918U, complete genome) position: , mismatch: 11, identity: 0.676

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
ccatgctgtctcatctttattccctttctctttt	Protospacer
   * . ..********* *******.******.

46. spacer 2.49|807371|34|NC_011567|PILER-CR,CRISPRCasFinder,CRT matches to KX119191 (Helicobacter phage Pt4497U, complete genome) position: , mismatch: 11, identity: 0.676

ggttttgacctcatcttttttcccttcctctttc	CRISPR spacer
ccatgctgtctcatctttattccctttctctttt	Protospacer
   * . ..********* *******.******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

253684 : 263414

Synechococcus_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041637672.1\|253684_254980_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	3.8e-18	34.0
WP_012573955.1\|255045_255768_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3HI61	Synechococcus_phage	1.8e-46	44.4
WP_006323591.1\|255755_256010_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	1.5e-06	35.8
WP_012573956.1\|256006_256693_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_012573957.1\|256676_258899_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.2e-165	42.6
WP_041637674.1\|258874_260302_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.7e-49	32.6
WP_012573959.1\|260264_261302_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.6e-67	43.9
WP_012573960.1\|261298_261901_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.4e-26	38.8
WP_012573961.1\|261878_263414_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.6e-78	51.3

DBSCAN-SWA_2

661328 : 746104

105

Geobacillus_virus(18.75%)

coat,transposase,protease,capsid,terminase,tail,tRNA,head,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041638010.1\|661328_663953_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.7e-162	41.9
WP_012574302.1\|664016_665321_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_012574303.1\|665379_668802_+	DUF5057 domain-containing protein	A0A140XG62	Salmonella_phage	5.0e-17	29.2
WP_041638011.1\|668820_669669_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_012574305.1\|669683_671321_-	hypothetical protein	NA	NA	NA	NA
WP_012574306.1\|671333_671903_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_041638012.1\|671886_672477_-	type II secretion system protein	NA	NA	NA	NA
WP_193330548.1\|672543_673752_+	hypothetical protein	NA	NA	NA	NA
WP_041638019.1\|673748_674495_+	PRC-barrel domain-containing protein	NA	NA	NA	NA
WP_041638020.1\|674508_675753_+	VanW family protein	NA	NA	NA	NA
WP_012574311.1\|675749_677411_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_041638021.1\|677421_678456_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_012574313.1\|678462_679674_+	type II secretion system F family protein	NA	NA	NA	NA
WP_012574314.1\|679749_680289_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_012574315.1\|680329_681079_+	prepilin peptidase	NA	NA	NA	NA
WP_012574316.1\|681091_682060_+	pilus assembly protein PilM	NA	NA	NA	NA
WP_041638022.1\|682043_682625_+	pilus assembly protein PilN	NA	NA	NA	NA
WP_041638023.1\|682621_683248_+	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA
WP_012574319.1\|683261_683702_+	type II secretion system protein	NA	NA	NA	NA
WP_041639268.1\|683807_684590_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_041638024.1\|684701_685271_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_012574322.1\|685705_687112_-	recombinase family protein	A0A1L2JY12	Aeribacillus_phage	4.7e-171	63.2
WP_041638025.1\|687169_687802_-	helix-turn-helix domain-containing protein	E5DV74	Deep-sea_thermophilic_phage	3.5e-57	53.6
WP_012574325.1\|687973_688189_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_167316060.1\|688202_688361_+	hypothetical protein	NA	NA	NA	NA
WP_012574326.1\|688338_688515_+	hypothetical protein	A6M976	Geobacillus_virus	7.7e-15	76.8
WP_041638026.1\|688561_688963_+	hypothetical protein	NA	NA	NA	NA
WP_041638027.1\|688974_689172_+	hypothetical protein	NA	NA	NA	NA
WP_012574329.1\|689168_689933_+	ORF6N domain-containing protein	A0A2I7SCV5	Paenibacillus_phage	2.6e-38	41.7
WP_012574330.1\|690165_690429_+	hypothetical protein	S6AVW9	Thermus_phage	1.2e-14	44.8
WP_041638029.1\|690428_690653_+	hypothetical protein	NA	NA	NA	NA
WP_012574332.1\|690649_690823_+	hypothetical protein	NA	NA	NA	NA
WP_148205013.1\|690935_691172_+	hypothetical protein	NA	NA	NA	NA
WP_012574334.1\|691242_691560_+	VRR-NUC domain-containing protein	A0A1B1P7M6	Bacillus_phage	1.9e-11	46.2
WP_041639270.1\|691519_692725_+	DEAD/DEAH box helicase	A0A2H4J064	uncultured_Caudovirales_phage	3.7e-31	28.0
WP_012574336.1\|692729_693623_+	YqaJ viral recombinase family protein	NA	NA	NA	NA
WP_012574337.1\|693624_694494_+	AAA family ATPase	A0A0A1ENB5	Lactobacillus_phage	1.9e-61	50.2
WP_012574338.1\|694545_695016_+	hypothetical protein	NA	NA	NA	NA
WP_012574339.1\|695027_696716_+	DNA polymerase B	A0A2H4J041	uncultured_Caudovirales_phage	2.9e-74	33.6
WP_012574340.1\|696728_697238_+	phage-related protein, containing Zn-ribbon domain	NA	NA	NA	NA
WP_012574341.1\|697240_697630_+	dUTP diphosphatase	A0A2H4IZM2	uncultured_Caudovirales_phage	9.6e-34	67.6
WP_012574342.1\|697629_697863_+	hypothetical protein	S6B9Y8	Thermus_phage	7.1e-16	79.6
WP_012574343.1\|697867_699730_+	phage associated DNA primase	A0A2H4JBE3	uncultured_Caudovirales_phage	1.2e-33	30.9
WP_012574344.1\|700079_700580_+	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	7.2e-58	66.5
WP_167316061.1\|700682_700838_+	hypothetical protein	S6C472	Thermus_phage	7.5e-06	58.8
WP_041638031.1\|700881_701178_+	HNH endonuclease	Q0H266	Geobacillus_phage	1.2e-33	70.7
WP_041638032.1\|701261_701618_+\|terminase	P27 family phage terminase small subunit	Q0H265	Geobacillus_phage	2.0e-54	91.5
WP_012574347.1\|701614_703339_+\|terminase	terminase large subunit	Q0H264	Geobacillus_phage	0.0e+00	90.9
WP_148205014.1\|703343_704540_+\|portal	phage portal protein	Q0H263	Geobacillus_phage	3.5e-199	83.9
WP_041638033.1\|704523_705132_+\|head,protease	HK97 family phage prohead protease	Q0H262	Geobacillus_phage	1.7e-93	87.1
WP_012574350.1\|705094_706369_+\|capsid	phage major capsid protein	Q0H261	Geobacillus_phage	8.0e-170	90.3
WP_012574351.1\|706376_706562_+	hypothetical protein	Q0H260	Geobacillus_phage	8.6e-17	71.4
WP_012574352.1\|706561_706837_+	hypothetical protein	A6XMJ8	Bacillus_virus	6.8e-42	92.2
WP_049753989.1\|706856_707183_+	hypothetical protein	A0A2I6UHP8	Bacillus_phage	4.3e-11	33.6
WP_012574354.1\|707194_707500_+\|head	phage head closure protein	A6XMK0	Bacillus_virus	8.9e-43	82.2
WP_041638034.1\|707492_707876_+	HK97 gp10 family phage protein	A6M956	Geobacillus_virus	2.6e-39	65.4
WP_041638035.1\|707877_708198_+	hypothetical protein	A6M957	Geobacillus_virus	6.9e-46	84.0
WP_012574357.1\|708202_708781_+\|tail	tail protein	A6M958	Geobacillus_virus	1.2e-83	77.6
WP_012574358.1\|708784_709132_+	hypothetical protein	A6M959	Geobacillus_virus	4.0e-31	59.6
WP_167316062.1\|709154_709316_+	hypothetical protein	A6M960	Geobacillus_virus	2.9e-08	57.9
WP_012574359.1\|709299_712251_+\|tail	phage tail tape measure protein	A6M961	Geobacillus_virus	4.7e-80	48.0
WP_012574360.1\|712252_713116_+\|tail	phage tail family protein	A0A0K2CZA8	Paenibacillus_phage	1.1e-69	46.2
WP_049753993.1\|713129_714755_+	hypothetical protein	S6B1J7	Thermus_phage	1.3e-60	47.4
WP_012574362.1\|714766_715150_+	hypothetical protein	S6C455	Thermus_phage	8.8e-48	76.0
WP_012574363.1\|715357_716503_+	siphovirus ReqiPepy6 Gp37-like family protein	A0A0K2CZQ1	Paenibacillus_phage	1.5e-87	42.5
WP_012574364.1\|716540_716759_+	hemolysin XhlA family protein	A6M968	Geobacillus_virus	3.5e-25	84.7
WP_012574365.1\|716755_717016_+	hypothetical protein	E5DV67	Deep-sea_thermophilic_phage	1.3e-31	91.7
WP_012574366.1\|717012_717654_+	M15 family metallopeptidase	A0A0H3V0Q8	Geobacillus_virus	9.9e-52	55.3
WP_012574367.1\|717683_717944_-	hypothetical protein	NA	NA	NA	NA
WP_041638037.1\|717940_718141_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012574369.1\|718434_718638_+	hypothetical protein	NA	NA	NA	NA
WP_012574370.1\|718684_718855_+	hypothetical protein	U5PZ86	Bacillus_phage	2.4e-05	49.1
WP_012574371.1\|718987_720160_+	cell division protein FtsK	A0A0A0RNH5	Bacillus_phage	6.3e-113	54.8
WP_049753995.1\|720095_720704_+	replication-relaxation family protein	A0A0U4II60	Bacillus_phage	2.9e-29	39.7
WP_080513055.1\|720700_720790_+	Ltp family lipoprotein	NA	NA	NA	NA
WP_006320433.1\|721303_722326_+	rod shape-determining protein	NA	NA	NA	NA
WP_012574373.1\|722345_723206_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_012574374.1\|723202_723727_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_041638038.1\|723764_724457_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_006320437.1\|724459_725266_+	septum site-determining protein MinD	A0A0K2FLP4	Brevibacillus_phage	3.9e-05	26.4
WP_012574377.1\|725353_726085_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_012574378.1\|726077_726941_+	stage IV sporulation protein FB	NA	NA	NA	NA
WP_032100208.1\|727078_727387_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_006320440.1\|727397_727733_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003396301.1\|727746_728037_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_012574380.1\|728125_728671_+	Spo0B domain-containing protein	NA	NA	NA	NA
WP_006320445.1\|728701_729988_+	GTPase ObgE	NA	NA	NA	NA
WP_041638040.1\|730010_730451_+	ACT domain-containing protein	NA	NA	NA	NA
WP_012574382.1\|730465_731329_+	prephenate dehydratase	NA	NA	NA	NA
WP_012574383.1\|731341_731875_-	transcription repressor NadR	NA	NA	NA	NA
WP_041638041.1\|731871_733008_-	IscS subfamily cysteine desulfurase	A0A1X6WFP1	Pacmanvirus	1.0e-35	28.6
WP_012574385.1\|733100_734633_+	L-aspartate oxidase	NA	NA	NA	NA
WP_041638042.1\|734629_735460_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_012574387.1\|735472_736576_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_012574388.1\|736711_737644_+\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA
WP_012574389.1\|737718_738459_+	NAD(+) synthase	A0A0K0KVL1	Prochlorococcus_phage	7.2e-30	37.1
WP_041638043.1\|738537_739233_+	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_012574391.1\|739317_740055_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_012574392.1\|740104_740569_+	BofC C-terminal domain-containing protein	NA	NA	NA	NA
WP_012574393.1\|740662_741256_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_041638044.1\|741268_742273_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	2.0e-06	31.6
WP_012574395.1\|742344_743520_+\|transposase	transposase	Q4Z968	Staphylococcus_phage	1.2e-95	48.7
WP_012574396.1\|743681_743888_+	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_041638045.1\|743912_744944_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_012574398.1\|744964_746104_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.5e-82	43.4

DBSCAN-SWA_3

1017794 : 1023515

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012574660.1\|1017794_1018871_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.2e-62	38.8
WP_041639300.1\|1018876_1019515_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.3e-43	43.8
WP_041638184.1\|1019520_1020714_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	9.3e-120	54.6
WP_006318211.1\|1020726_1021191_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.2e-44	61.7
WP_006318213.1\|1021273_1021618_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012574663.1\|1021624_1022152_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_041639302.1\|1022179_1022941_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.1e-08	24.2
WP_080513062.1\|1022933_1023515_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-14	36.4

DBSCAN-SWA_4

1607336 : 1657687

Lactococcus_phage(16.67%)

tail,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041638476.1\|1607336_1607801_-\|tail	phage tail protein	NA	NA	NA	NA
WP_012575199.1\|1607845_1608235_-	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_041638478.1\|1608231_1608483_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_012575201.1\|1608694_1609066_-	iron chaperone	NA	NA	NA	NA
WP_041638480.1\|1609226_1610201_+	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	2.1e-13	27.2
WP_012575203.1\|1610197_1610584_+	hypothetical protein	NA	NA	NA	NA
WP_049754161.1\|1610608_1611550_-	redoxin domain-containing protein	NA	NA	NA	NA
WP_012575205.1\|1611739_1612132_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_041638482.1\|1612161_1612623_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_041638484.1\|1612694_1613474_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_041638485.1\|1613634_1614204_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_012575209.1\|1614251_1614959_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_012575210.1\|1615211_1615589_-	VOC family protein	NA	NA	NA	NA
WP_012575211.1\|1615687_1616827_-	virulence factor	NA	NA	NA	NA
WP_041638486.1\|1616963_1617392_-	NUDIX hydrolase	NA	NA	NA	NA
WP_041639336.1\|1617444_1617927_-	NUDIX hydrolase	D0R7I2	Paenibacillus_phage	1.5e-07	30.4
WP_012575214.1\|1618068_1620192_-	hypothetical protein	NA	NA	NA	NA
WP_041638488.1\|1620255_1620771_-	hypothetical protein	NA	NA	NA	NA
WP_041638490.1\|1622208_1623492_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_041638491.1\|1623858_1624155_+	hypothetical protein	NA	NA	NA	NA
WP_012575219.1\|1624158_1624653_+	PIN domain-containing protein	NA	NA	NA	NA
WP_041638492.1\|1625026_1625335_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012575222.1\|1626447_1628415_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_012575224.1\|1628809_1630120_-	DUF3895 domain-containing protein	NA	NA	NA	NA
WP_012575225.1\|1630307_1632017_-	AAA family ATPase	NA	NA	NA	NA
WP_012575226.1\|1632667_1634617_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_012575227.1\|1634652_1635012_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_041638499.1\|1635334_1636189_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012575032.1\|1637017_1637530_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	8.3e-09	29.5
WP_012575033.1\|1637547_1638078_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_167316068.1\|1639537_1639687_-	hypothetical protein	NA	NA	NA	NA
WP_012575232.1\|1640630_1641077_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041638501.1\|1641475_1643179_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_167316069.1\|1643269_1643443_-	hypothetical protein	NA	NA	NA	NA
WP_041638502.1\|1643533_1645024_-	malate:quinone oxidoreductase	NA	NA	NA	NA
WP_041638504.1\|1645296_1646745_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_012575236.1\|1647241_1648357_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.4e-24	38.9
WP_041638505.1\|1648387_1649050_-	DUF975 family protein	NA	NA	NA	NA
WP_012574977.1\|1649334_1650564_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	7.7e-85	47.7
WP_041638507.1\|1650986_1651361_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_012575239.1\|1651381_1652851_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	4.8e-142	56.2
WP_012575240.1\|1653075_1653492_+	universal stress protein	NA	NA	NA	NA
WP_012575242.1\|1653673_1654678_-	CapA family protein	NA	NA	NA	NA
WP_049754163.1\|1654767_1655988_-	GntP family permease	NA	NA	NA	NA
WP_041638511.1\|1656553_1657687_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1992128 : 2049736

uncultured_Caudovirales_phage(18.18%)

integrase,transposase

attL 2034885:2034944|attR 2050261:2050342

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012575559.1\|1992128_1993232_-\|transposase	transposase	A0A288TXV8	Enterococcus_phage	1.8e-85	50.4
WP_041638689.1\|1993726_1994005_-	hypothetical protein	NA	NA	NA	NA
WP_012575561.1\|1993997_1995257_-	AAA family ATPase	NA	NA	NA	NA
WP_041638691.1\|1995455_1997183_+	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_012575564.1\|1997326_1997482_-	hypothetical protein	NA	NA	NA	NA
WP_012575565.1\|1997478_1997619_-	hypothetical protein	NA	NA	NA	NA
WP_041638693.1\|1997702_1998044_+	DUF3905 domain-containing protein	NA	NA	NA	NA
WP_012575567.1\|1998185_1999001_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_012575568.1\|1999013_1999904_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_012575569.1\|2000007_2001276_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012575570.1\|2001330_2002020_-	beta-phosphoglucomutase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	7.7e-10	27.8
WP_041638697.1\|2002016_2004359_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_041639346.1\|2004429_2005446_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_148205054.1\|2005682_2007431_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-11	35.8
WP_012575574.1\|2007505_2008609_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012575575.1\|2008704_2010117_+	glycolate oxidase subunit GlcD	NA	NA	NA	NA
WP_012575576.1\|2010113_2011457_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_041638699.1\|2011468_2012278_-	DnaD domain protein	A0A0U4JX08	Bacillus_phage	2.1e-30	55.4
WP_041638701.1\|2012362_2012866_-	ferritin	NA	NA	NA	NA
WP_041638703.1\|2012921_2013707_-	TerC family protein	A0A068EP98	Bacillus_phage	5.3e-31	40.4
WP_012575580.1\|2013956_2015372_-	amino acid permease	NA	NA	NA	NA
WP_012575581.1\|2015464_2016736_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_012575582.1\|2016854_2018021_+	tetracycline resistance MFS efflux pump	NA	NA	NA	NA
WP_041638705.1\|2018029_2019025_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	3.0e-47	38.1
WP_012575584.1\|2019021_2020734_-	membrane protein	NA	NA	NA	NA
WP_012575585.1\|2020785_2021349_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_012575586.1\|2021509_2022145_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_148205032.1\|2022358_2022889_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_012575589.1\|2023371_2024472_-	alanine/ornithine racemase family PLP-dependent enzyme	NA	NA	NA	NA
WP_041638707.1\|2024468_2025551_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_012575591.1\|2025796_2027212_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_012575592.1\|2027244_2028654_-	aspartate ammonia-lyase	NA	NA	NA	NA
WP_041638709.1\|2028654_2029665_-	asparaginase	NA	NA	NA	NA
WP_041638711.1\|2029848_2030181_+	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	1.0e-07	33.6
WP_012575595.1\|2030195_2030957_-	serine/threonine-protein kinase	A0A2H4UVE2	Bodo_saltans_virus	1.8e-15	27.8
WP_012575596.1\|2030956_2031130_-	hypothetical protein	NA	NA	NA	NA
WP_041638714.1\|2031258_2031948_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_012575598.1\|2031937_2032240_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_041638716.1\|2032276_2033155_-	DMT family transporter	NA	NA	NA	NA
WP_012575600.1\|2033898_2034483_-	hypothetical protein	NA	NA	NA	NA
2034885:2034944	attL	NA	NA	NA	NA
WP_012576225.1\|2036263_2037445_+\|transposase	IS701-like element ISAfl1 family transposase	NA	NA	NA	NA
WP_012575601.1\|2037541_2038672_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_012575602.1\|2038743_2041806_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	4.7e-67	24.5
WP_012575603.1\|2041841_2043092_-	restriction endonuclease subunit S	E3T4D5	Cafeteria_roenbergensis_virus	5.9e-16	27.2
WP_012575604.1\|2043088_2044636_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_012575605.1\|2044961_2045840_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_012575606.1\|2045935_2047114_+	hypothetical protein	NA	NA	NA	NA
WP_041637668.1\|2047185_2048634_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_148205033.1\|2048775_2049372_+	hypothetical protein	NA	NA	NA	NA
WP_080513108.1\|2049493_2049736_+\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	8.1e-07	39.7
2050261:2050342	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2190660 : 2241945

Clostridium_botulinum_C_phage(16.67%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012575746.1\|2190660_2191821_-\|transposase	transposase	Q331V1	Clostridium_botulinum_C_phage	1.4e-117	56.1
WP_012575747.1\|2191817_2192414_-\|transposase	IS607 family transposase	Q331V0	Clostridium_botulinum_C_phage	1.5e-78	68.5
WP_012575748.1\|2193759_2194377_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_012575749.1\|2194393_2194543_+	hypothetical protein	NA	NA	NA	NA
WP_041638823.1\|2194630_2195161_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012575751.1\|2195175_2195691_+\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	1.9e-08	29.9
WP_041639361.1\|2195727_2196021_-	hypothetical protein	NA	NA	NA	NA
WP_012575754.1\|2197027_2197525_+	response regulator transcription factor	NA	NA	NA	NA
WP_041638825.1\|2197552_2199145_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.8e-39	25.6
WP_009361956.1\|2199284_2199509_+	spore germination protein	NA	NA	NA	NA
WP_012575757.1\|2199512_2199734_+	spore germination protein	NA	NA	NA	NA
WP_006319008.1\|2199746_2199959_+	spore germination protein GerPB	NA	NA	NA	NA
WP_012575758.1\|2200031_2200616_+	spore germination protein GerPC	NA	NA	NA	NA
WP_012575759.1\|2200612_2200810_+	hypothetical protein	NA	NA	NA	NA
WP_041638828.1\|2200806_2201202_+	spore germination protein GerPE	NA	NA	NA	NA
WP_012575761.1\|2201176_2201398_+	spore germination protein	NA	NA	NA	NA
WP_012575762.1\|2201394_2201673_-	HNH endonuclease	NA	NA	NA	NA
WP_012575763.1\|2201685_2205045_-	AAA family ATPase	G3MAB6	Bacillus_virus	6.4e-09	24.1
WP_041638831.1\|2205041_2206202_-	exonuclease subunit SbcD	NA	NA	NA	NA
WP_012575765.1\|2206203_2209833_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	1.4e-20	22.6
WP_041638832.1\|2209837_2213302_-	helicase-exonuclease AddAB subunit AddB	NA	NA	NA	NA
WP_012575767.1\|2213318_2213921_-	TVP38/TMEM64 family protein	NA	NA	NA	NA
WP_041638835.1\|2214359_2215478_+\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	2.6e-87	45.0
WP_041638839.1\|2216110_2218096_+	AAA family ATPase	NA	NA	NA	NA
WP_012575770.1\|2218096_2219908_+	ATP-dependent helicase	A7KV33	Bacillus_phage	1.7e-32	24.0
WP_041639364.1\|2220258_2221989_-	N-6 DNA methylase	NA	NA	NA	NA
WP_012575772.1\|2222125_2222371_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012575773.1\|2222374_2223499_+	hypothetical protein	NA	NA	NA	NA
WP_012575774.1\|2223879_2225160_-	isocitrate lyase	NA	NA	NA	NA
WP_012575775.1\|2225378_2226626_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_012575776.1\|2226769_2227360_+	SCO family protein	NA	NA	NA	NA
WP_012575777.1\|2227446_2229558_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.5e-07	64.2
WP_148205034.1\|2229575_2229938_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012575779.1\|2230066_2231434_+	HD domain-containing protein	NA	NA	NA	NA
WP_148205055.1\|2231543_2232053_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_012575781.1\|2232068_2233289_+	EAL domain-containing protein	NA	NA	NA	NA
WP_041638842.1\|2233390_2235763_+	EAL domain-containing protein	NA	NA	NA	NA
WP_041638844.1\|2235775_2236570_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	7.8e-14	28.0
WP_041638846.1\|2236535_2237510_-	ABC transporter permease	NA	NA	NA	NA
WP_080513080.1\|2237527_2238514_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041638848.1\|2238619_2240170_-	fatty acid--CoA ligase family protein	A0A2H4PQM9	Staphylococcus_phage	2.8e-52	30.3
WP_080513081.1\|2240417_2240642_+\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_148205035.1\|2240823_2241945_-\|transposase	transposase	A0A0P0IJS6	Lactobacillus_phage	1.5e-58	38.0

DBSCAN-SWA_7

2308086 : 2356341

Streptococcus_phage(33.33%)

tRNA,integrase,transposase,protease

attL 2331223:2331240|attR 2339087:2339104

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012575858.1\|2308086_2309052_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_012575859.1\|2309048_2309981_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_041638899.1\|2309985_2310444_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	3.3e-25	43.7
WP_012575861.1\|2310544_2310796_+	YhdB family protein	NA	NA	NA	NA
WP_041638900.1\|2310824_2311532_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_041638902.1\|2311603_2313343_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.6e-160	49.8
WP_041638904.1\|2313654_2314086_-	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	1.5e-11	33.6
WP_012575865.1\|2314213_2314642_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_012575866.1\|2314638_2315103_+	thioredoxin family protein	NA	NA	NA	NA
WP_006319180.1\|2315127_2315520_-	YhcU family protein	NA	NA	NA	NA
WP_041638907.1\|2315625_2316537_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_012575869.1\|2316615_2318103_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	2.1e-129	50.2
WP_041639368.1\|2318097_2319435_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_012575871.1\|2319481_2320168_-	zinc metallopeptidase	NA	NA	NA	NA
WP_012575872.1\|2320322_2321456_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_012575873.1\|2321509_2321737_-	glutaredoxin family protein	NA	NA	NA	NA
WP_006319186.1\|2321819_2322596_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_006319187.1\|2322644_2322872_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_012575874.1\|2322883_2323279_-	DsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA
WP_012575875.1\|2323275_2323857_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_035048092.1\|2323868_2324168_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_041639369.1\|2324312_2325473_-	sporulation protein YhbH	X2JIL8	Bacillus_phage	4.9e-25	45.8
WP_041638911.1\|2325692_2327588_-	PrkA family serine protein kinase	A0MN77	Thermus_phage	4.3e-103	36.6
WP_012575879.1\|2327869_2328352_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_041638915.1\|2328354_2329212_-	amidase domain-containing protein	NA	NA	NA	NA
WP_012575881.1\|2329270_2330407_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_049754096.1\|2330467_2331130_+\|tRNA	tRNA synthetase subunit beta	NA	NA	NA	NA
2331223:2331240	attL	NA	NA	NA	NA
WP_148205037.1\|2331641_2331833_-	hypothetical protein	NA	NA	NA	NA
WP_012575883.1\|2331915_2332944_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_148205038.1\|2333034_2333868_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_012575885.1\|2333888_2334815_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_041639370.1\|2334875_2336165_-	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_041638917.1\|2336348_2337701_-	beta-glucosidase	A0A0B5JD41	Pandoravirus	1.3e-69	33.7
WP_041638919.1\|2338133_2338406_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_049754097.1\|2345416_2346331_-	DMT family transporter	NA	NA	NA	NA
2339087:2339104	attR	NA	NA	NA	NA
WP_003398734.1\|2346367_2347045_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	3.3e-13	37.1
WP_080513084.1\|2347738_2348005_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012575892.1\|2348227_2349565_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_004892278.1\|2349643_2350114_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_041638924.1\|2352848_2353037_-	hypothetical protein	NA	NA	NA	NA
WP_041639373.1\|2353578_2354943_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_012575894.1\|2355105_2356341_+\|transposase	ISL3 family transposase	A9YX10	Burkholderia_phage	4.3e-11	24.0

DBSCAN-SWA_8

2596555 : 2611870

Bacillus_phage(66.67%)

bacteriocin,integrase,transposase,protease

attL 2607738:2607751|attR 2612844:2612857

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012576101.1\|2596555_2597278_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_012576102.1\|2597288_2598947_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_012576103.1\|2598959_2601155_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.9e-58	30.3
WP_075039767.1\|2601633_2601876_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_128713019.1\|2601953_2602187_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_012576108.1\|2602688_2602898_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_019417539.1\|2603126_2604104_+	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_012576110.1\|2604100_2605438_+	sensor histidine kinase	NA	NA	NA	NA
WP_012576111.1\|2605451_2606093_+	response regulator transcription factor	NA	NA	NA	NA
WP_012576112.1\|2606945_2607380_+	hypothetical protein	NA	NA	NA	NA
WP_012576113.1\|2607624_2608005_+	hypothetical protein	NA	NA	NA	NA
2607738:2607751	attL	NA	NA	NA	NA
WP_049754113.1\|2610055_2610454_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_035067544.1\|2610410_2610653_-	hypothetical protein	NA	NA	NA	NA
WP_167316078.1\|2611132_2611474_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.9e-19	50.9
WP_080513092.1\|2611480_2611870_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5P429	Shigella_phage	2.5e-26	51.7
2612844:2612857	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2731825 : 2763779

Bacillus_virus(25.0%)

protease,transposase,tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012576219.1\|2731825_2733496_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_012576220.1\|2733492_2733930_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_012576221.1\|2734034_2735252_-\|transposase	transposase	G3MB42	Bacillus_virus	8.6e-97	44.8
WP_012576222.1\|2735248_2735851_-\|transposase	IS607 family transposase	A0A1V0SJI5	Klosneuvirus	2.8e-40	44.4
WP_012576223.1\|2736276_2736735_+	hypothetical protein	NA	NA	NA	NA
WP_012576224.1\|2736785_2737358_+	VanZ family protein	NA	NA	NA	NA
WP_012576225.1\|2737453_2738635_+\|transposase	IS701-like element ISAfl1 family transposase	NA	NA	NA	NA
WP_004893113.1\|2738826_2739699_-	agmatinase	NA	NA	NA	NA
WP_026011432.1\|2739711_2740539_-	polyamine aminopropyltransferase	NA	NA	NA	NA
WP_041639168.1\|2740714_2742766_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_012576228.1\|2742904_2743411_-	YwhD family protein	NA	NA	NA	NA
WP_041639170.1\|2743428_2744097_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003397075.1\|2744227_2744416_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_148205044.1\|2744426_2744939_-	YwgA family protein	NA	NA	NA	NA
WP_012576232.1\|2744951_2746274_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.4e-23	29.3
WP_003397078.1\|2746371_2746596_-	DUF1450 domain-containing protein	NA	NA	NA	NA
WP_041639171.1\|2746741_2747413_+	RsfA family transcriptional regulator	A0A1D6X8E5	Bacillus_phage	3.3e-05	47.0
WP_041639174.1\|2747439_2748267_-	lipoate--protein ligase family protein	NA	NA	NA	NA
WP_012576236.1\|2748263_2749247_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_012576237.1\|2749443_2750007_+	DedA family protein	NA	NA	NA	NA
WP_035020173.1\|2750074_2750821_+	heme-dependent peroxidase	NA	NA	NA	NA
WP_012576238.1\|2750942_2751365_+	cell wall hydrolase	NA	NA	NA	NA
WP_006321023.1\|2751379_2751823_+\|coat	spore coat protein GerQ	NA	NA	NA	NA
WP_012576239.1\|2751849_2752212_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_012576240.1\|2752223_2752460_-	YwdI family protein	NA	NA	NA	NA
WP_012576241.1\|2752558_2754175_+	alpha-glucosidase	NA	NA	NA	NA
WP_041639176.1\|2754192_2755188_-	potassium channel protein	NA	NA	NA	NA
WP_041639178.1\|2755365_2756040_-	uracil-DNA glycosylase	A0A0B5IW78	Pandoravirus	5.5e-53	47.7
WP_012576245.1\|2756098_2757481_-\|tRNA	glycine--tRNA ligase	A0A1V0SAN4	Catovirus	2.4e-50	29.7
WP_012576246.1\|2757780_2759310_-	alkyl hydroperoxide reductase subunit F	A0A1W6JK46	Lactococcus_phage	1.1e-19	30.1
WP_012576247.1\|2759323_2759887_-	peroxiredoxin	NA	NA	NA	NA
WP_012576248.1\|2760123_2760357_-	hypothetical protein	NA	NA	NA	NA
WP_041639180.1\|2760368_2761184_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_012576250.1\|2761245_2762442_-	MFS transporter	NA	NA	NA	NA
WP_041639182.1\|2762603_2763779_-\|transposase	transposase	D2XQ03	Bacillus_virus	1.1e-99	51.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_011567

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection