CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_009012	Hungateiclostridium thermocellum ATCC 27405, complete sequence	5 crisprs	DinG,DEDDh,csa3,cas3,WYL,csm2gr11,csm3gr7,csx10gr5,cas10,cas6,csx1,cas2,cas1,cas4,cas5,cas7,cas8b1,csx19	0	32	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_009012_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009012_1

716798-720026

Orphan

Consensus_repeat	Method
GTTTGTATCGTACCTATGAGGAATTGAAAC	PILER-CR
GTTTGTATCGTACCTATGAGGAATTGAAAC	CRISPRCasFinder
GTTTGTATCGTACCTATGAGGAATTGAAAC	CRT

48 spacers

The CRISPR arrays of NC_009012_1

>merge|NC_009012|1|716798-720026|PILER-CR,CRISPRCasFinder,CRT
GTTTGTATCGTACCTATGAGGAATTGAAACTAAAACAAAGGAGAATTGTAAATGGAAGAGTATTTGAGTTTGTATCGTACCTATGAGGAATTGAAACTCGAGATTTTGGAACTTTGTTTCGCCATTCGTGTCTGTTTGTATCGTACCTATGAGGAATTGAAACTCCGCAAAAGAGAGAATCAGAGCTGCCGAACTTTTGGGTTTGTATCGTACCTATGAGGAATTGAAACCGTTTCATGGATTTGATAAGTTCAAGCTCTATCTCGTTTGTATCGTACCTATGAGGAATTGAAACGATTCAGAATTGAACGAGTACGTCAAAAGCGTTTTAGTTTGTATCGTACCTATGAGGAATTGAAACTAGATGAATCAAATAGTTCTACTGGACTTGGAGATACGTTTGTATCGTACCTATGAGGAATTGAAACAAATAAATCTAAAGGGTATGCCACGGAAACGTTATAGTTTGTATCGTACCTATGAGGAATTGAAACCCCAGTATGGAATGGCGGTGGAACTGTCCGGCTGGCGTTTGTATCGTACCTATGAGGAATTGAAACGCTCTAACAGTAATTCAATTATTTTTGTATTCATTTGGTTTGTATCGTACCTATGAGGAATTGAAACCGGGCCGCGCCTATTTGCGTGGGAACCCTTATAATGGGTTTGTATCGTACCTATGAGGAATTGAAACCGGTACTGCTGTGGTTATCGACGAGATTCAGACTTGGTTTGTATCGTACCTATGAGGAATTGAAACACGGAAGAGAAAAAACAGCAGATAATACAAAGCGTAGTTTGTATCGTACCTATGAGGAATTGAAACTCATTTTTTTCACGACTATACAATATACCATTTGAATGTTTGTATCGTACCTATGAGGAATTGAAACTGGCTGAAAGGTTATAGGTTGAAAGGAAAAGTCCCGTTTGTATCGTACCTATGAGGAATTGAAACTCTCGCCTTTTGGCGGTTCGACTTTTGCCGCTTTCAGTTTGTATCGTACCTATGAGGAATTGAAACGAATTGCCATTAAGTCTTTGGTTTCTTGTCTTGTCATGGTTTGTATCGTACCTATGAGGAATTGAAACTACAGCCTCCTTCATGCTTTCTCCTTTGTCAGCTAACTCGTTTGTATCGTACCTATGAGGAATTGAAACAAGGCTGGGGTGAGTGGGTTGAAGTAACTGAAGGTGGTTTGTATCGTACCTATGAGGAATTGAAACTTATTTTTAGTACATCATTATTTGTGATTATTCTAGTTTGTATCGTACCTATGAGGAATTGAAACTTTGCCCTCTCCTTTCTTTTCTTTTGTTTGTTTTAGCGGTTTGTATCGTACCTATGAGGAATTGAAACTCTACCTGTTGAGCTTCTGCCACTTGTTCTAATGTAGTTTGTATCGTACCTATGAGGAATTGAAACTTGTTCAGCCTCCTTTCTAAGCAATGTAATAATAAAAGTTTGTATCGTACCTATGAGGAATTGAAACCTTCATAATCTTTAGGGGTTCTTTTCTTCATATTGTCAGTTTGTATCGTACCTATGAGGAATTGAAACCAACACTCCTTTATTATTATTATTTTTCCTGCCTTTGCGTTTGTATCGTACCTATGAGGAATTGAAACTAGGCCAGCTCGAAAAAGCCGGCGCTAACACCGAAGGTTTGTATCGTACCTATGAGGAATTGAAACATGTGCCTCCGCCACGTCTTGTTATAATTGCTTCTCCGTTTGTATCGTACCTATGAGGAATTGAAACCATTGTTGCCTAGTTGTTTTTTTGGTTTTACTTCTCGTTTGTATCGTACCTATGAGGAATTGAAACATTGCCGGCGGCAAGTCTGAAGCGCCAAGAATTGACCGGTTTGTATCGTACCTATGAGGAATTGAAACCCGACTGTTCGACGTAGACGTCGACAGGAGGAAAGAGTTTGTATCGTACCTATGAGGAATTGAAACCCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGTGTTTGTATCGTACCTATGAGGAATTGAAACCAGAAAACTTGTGAACTACCGCCACTTATAGAAGTGGTTTGTATCGTACCTATGAGGAATTGAAACTTGTTCTGCAACTTATGTAAACATGTAGTCGAAATCAGTTTGTATCGTACCTATGAGGAATTGAAACTCTATCATGTAAACGGTAATGCATCCCATACACGCTGTTTGTATCGTACCTATGAGGAATTGAAACCCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGTGTTTGTATCGTACCTATGAGGAATTGAAACCCCCATTCAAGAATATTCACTGCTATTCACCTTCTTGTTTGTATCGTACCTATGAGGAATTGAAACATAATTCACATAATGCAAATGTTGCACAACTTGTATGTTTGTATCGTACCTATGAGGAATTGAAACCCGATAAGCTAAATGTCAACGCTGAGATGATGGTAAGTTTGTATCGTACCTATGAGGAATTGAAACAATCCCGCCCATTCGGCTGCCAAATCAATTCCGCCTAGTTTGTATCGTACCTATGAGGAATTGAAACTATTGTGCCAAGTGTCAATACTTTTGGTACAATATTTGTTTGTATCGTACCTATGAGGAATTGAAACCAAATAGGTCTGTATACATTCTATTTTGATACAAGTGTTTGTATCGTACCTATGAGGAATTGAAACTTGTGGCGACAGAACGGCGGGAATAGCAGTGTTGCAGTTTGTATCGTACCTATGAGGAATTGAAACATGTAACCAGCCCATGTCATTTCTGCCTTTTGCTCCAGTTTGTATCGTACCTATGAGGAATTGAAACTGAGGATAAAATACAGCAGTACCTTGAACTAGATGAGGTTTGTATCGTACCTATGAGGAATTGAAACATAAAACTATTTATTTTTTGTTCACAATTGTGTACAAGTTTGTATCGTACCTATGAGGAATTGAAACAAAAATGGCGAGCAGGCAGGGGGTTAGGACCCACCCGTTTGTATCGTACCTATGAGGAATTGAAATCGATTTTGCAGACAGTCAAGAAGATGCAGAACGTAAACGTTTGTATCGTACCTATGAGGAATTGAAATAGCAAATATTTGATTCAAAAATAGAGCTAGTAAAGAATGTTTGTATCGTACCTATGAGGAATTGAAATTTTTTCAAACTTGCAGGGCTAGGCAGGAATCGAACCTGCGTTTGTATCGTACCTATGAGGAATTGAAAC

>NC_009012|1|1|716798-719957|PILER-CR
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAAAACAAAGGAGAATTGTAAATGGAAGAGTATTTGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGAGATTTTGGAACTTTGTTTCGCCATTCGTGTCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCAAAAGAGAGAATCAGAGCTGCCGAACTTTTGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTTTCATGGATTTGATAAGTTCAAGCTCTATCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GATTCAGAATTGAACGAGTACGTCAAAAGCGTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGATGAATCAAATAGTTCTACTGGACTTGGAGATAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATAAATCTAAAGGGTATGCCACGGAAACGTTATA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCAGTATGGAATGGCGGTGGAACTGTCCGGCTGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTCTAACAGTAATTCAATTATTTTTGTATTCATTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGGCCGCGCCTATTTGCGTGGGAACCCTTATAATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGTACTGCTGTGGTTATCGACGAGATTCAGACTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGAAGAGAAAAAACAGCAGATAATACAAAGCGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCATTTTTTTCACGACTATACAATATACCATTTGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGGCTGAAAGGTTATAGGTTGAAAGGAAAAGTCCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTCGCCTTTTGGCGGTTCGACTTTTGCCGCTTTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GAATTGCCATTAAGTCTTTGGTTTCTTGTCTTGTCATG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TACAGCCTCCTTCATGCTTTCTCCTTTGTCAGCTAACTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAGGCTGGGGTGAGTGGGTTGAAGTAACTGAAGGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTATTTTTAGTACATCATTATTTGTGATTATTCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTTGCCCTCTCCTTTCTTTTCTTTTGTTTGTTTTAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTACCTGTTGAGCTTCTGCCACTTGTTCTAATGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCAGCCTCCTTTCTAAGCAATGTAATAATAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTTCATAATCTTTAGGGGTTCTTTTCTTCATATTGTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAACACTCCTTTATTATTATTATTTTTCCTGCCTTTGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGGCCAGCTCGAAAAAGCCGGCGCTAACACCGAAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTGCCTCCGCCACGTCTTGTTATAATTGCTTCTCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTGTTGCCTAGTTGTTTTTTTGGTTTTACTTCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTGCCGGCGGCAAGTCTGAAGCGCCAAGAATTGACCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGACTGTTCGACGTAGACGTCGACAGGAGGAAAGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAGAAAACTTGTGAACTACCGCCACTTATAGAAGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCTGCAACTTATGTAAACATGTAGTCGAAATCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATCATGTAAACGGTAATGCATCCCATACACGCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCCATTCAAGAATATTCACTGCTATTCACCTTCTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAATTCACATAATGCAAATGTTGCACAACTTGTAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGATAAGCTAAATGTCAACGCTGAGATGATGGTAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATCCCGCCCATTCGGCTGCCAAATCAATTCCGCCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TATTGTGCCAAGTGTCAATACTTTTGGTACAATATTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAAATAGGTCTGTATACATTCTATTTTGATACAAGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTGGCGACAGAACGGCGGGAATAGCAGTGTTGCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTAACCAGCCCATGTCATTTCTGCCTTTTGCTCCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGATAAAATACAGCAGTACCTTGAACTAGATGAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAAAACTATTTATTTTTTGTTCACAATTGTGTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAAAATGGCGAGCAGGCAGGGGGTTAGGACCCACCC
GTTTGTATCGTACCTATGAGGAATTGAAAT	CGATTTTGCAGACAGTCAAGAAGATGCAGAACGTAAAC
GTTTGTATCGTACCTATGAGGAATTGAAAT	AGCAAATATTTGATTCAAAAATAGAGCTAGTAAAGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAT

>NC_009012|1|1|716798-720026|CRISPRCasFinder
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAAAACAAAGGAGAATTGTAAATGGAAGAGTATTTGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGAGATTTTGGAACTTTGTTTCGCCATTCGTGTCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCAAAAGAGAGAATCAGAGCTGCCGAACTTTTGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTTTCATGGATTTGATAAGTTCAAGCTCTATCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GATTCAGAATTGAACGAGTACGTCAAAAGCGTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGATGAATCAAATAGTTCTACTGGACTTGGAGATAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATAAATCTAAAGGGTATGCCACGGAAACGTTATA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCAGTATGGAATGGCGGTGGAACTGTCCGGCTGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTCTAACAGTAATTCAATTATTTTTGTATTCATTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGGCCGCGCCTATTTGCGTGGGAACCCTTATAATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGTACTGCTGTGGTTATCGACGAGATTCAGACTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGAAGAGAAAAAACAGCAGATAATACAAAGCGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCATTTTTTTCACGACTATACAATATACCATTTGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGGCTGAAAGGTTATAGGTTGAAAGGAAAAGTCCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTCGCCTTTTGGCGGTTCGACTTTTGCCGCTTTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GAATTGCCATTAAGTCTTTGGTTTCTTGTCTTGTCATG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TACAGCCTCCTTCATGCTTTCTCCTTTGTCAGCTAACTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAGGCTGGGGTGAGTGGGTTGAAGTAACTGAAGGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTATTTTTAGTACATCATTATTTGTGATTATTCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTTGCCCTCTCCTTTCTTTTCTTTTGTTTGTTTTAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTACCTGTTGAGCTTCTGCCACTTGTTCTAATGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCAGCCTCCTTTCTAAGCAATGTAATAATAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTTCATAATCTTTAGGGGTTCTTTTCTTCATATTGTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAACACTCCTTTATTATTATTATTTTTCCTGCCTTTGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGGCCAGCTCGAAAAAGCCGGCGCTAACACCGAAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTGCCTCCGCCACGTCTTGTTATAATTGCTTCTCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTGTTGCCTAGTTGTTTTTTTGGTTTTACTTCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTGCCGGCGGCAAGTCTGAAGCGCCAAGAATTGACCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGACTGTTCGACGTAGACGTCGACAGGAGGAAAGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAGAAAACTTGTGAACTACCGCCACTTATAGAAGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCTGCAACTTATGTAAACATGTAGTCGAAATCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATCATGTAAACGGTAATGCATCCCATACACGCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCCATTCAAGAATATTCACTGCTATTCACCTTCTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAATTCACATAATGCAAATGTTGCACAACTTGTAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGATAAGCTAAATGTCAACGCTGAGATGATGGTAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATCCCGCCCATTCGGCTGCCAAATCAATTCCGCCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TATTGTGCCAAGTGTCAATACTTTTGGTACAATATTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAAATAGGTCTGTATACATTCTATTTTGATACAAGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTGGCGACAGAACGGCGGGAATAGCAGTGTTGCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTAACCAGCCCATGTCATTTCTGCCTTTTGCTCCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGATAAAATACAGCAGTACCTTGAACTAGATGAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAAAACTATTTATTTTTTGTTCACAATTGTGTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAAAATGGCGAGCAGGCAGGGGGTTAGGACCCACCC
GTTTGTATCGTACCTATGAGGAATTGAAAT	CGATTTTGCAGACAGTCAAGAAGATGCAGAACGTAAAC
GTTTGTATCGTACCTATGAGGAATTGAAAT	AGCAAATATTTGATTCAAAAATAGAGCTAGTAAAGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAT	TTTTTCAAACTTGCAGGGCTAGGCAGGAATCGAACCTGC
GTTTGTATCGTACCTATGAGGAATTGAAAC

>NC_009012|1|1|716798-720026|CRT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAAAACAAAGGAGAATTGTAAATGGAAGAGTATTTGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCGAGATTTTGGAACTTTGTTTCGCCATTCGTGTCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCCGCAAAAGAGAGAATCAGAGCTGCCGAACTTTTGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGTTTCATGGATTTGATAAGTTCAAGCTCTATCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GATTCAGAATTGAACGAGTACGTCAAAAGCGTTTTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGATGAATCAAATAGTTCTACTGGACTTGGAGATAC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAATAAATCTAAAGGGTATGCCACGGAAACGTTATA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCAGTATGGAATGGCGGTGGAACTGTCCGGCTGGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	GCTCTAACAGTAATTCAATTATTTTTGTATTCATTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGGCCGCGCCTATTTGCGTGGGAACCCTTATAATGG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CGGTACTGCTGTGGTTATCGACGAGATTCAGACTTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ACGGAAGAGAAAAAACAGCAGATAATACAAAGCGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCATTTTTTTCACGACTATACAATATACCATTTGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGGCTGAAAGGTTATAGGTTGAAAGGAAAAGTCCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTCGCCTTTTGGCGGTTCGACTTTTGCCGCTTTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	GAATTGCCATTAAGTCTTTGGTTTCTTGTCTTGTCATG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TACAGCCTCCTTCATGCTTTCTCCTTTGTCAGCTAACTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAGGCTGGGGTGAGTGGGTTGAAGTAACTGAAGGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTATTTTTAGTACATCATTATTTGTGATTATTCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTTGCCCTCTCCTTTCTTTTCTTTTGTTTGTTTTAGCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTACCTGTTGAGCTTCTGCCACTTGTTCTAATGTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCAGCCTCCTTTCTAAGCAATGTAATAATAAAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CTTCATAATCTTTAGGGGTTCTTTTCTTCATATTGTCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAACACTCCTTTATTATTATTATTTTTCCTGCCTTTGC
GTTTGTATCGTACCTATGAGGAATTGAAAC	TAGGCCAGCTCGAAAAAGCCGGCGCTAACACCGAAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTGCCTCCGCCACGTCTTGTTATAATTGCTTCTCC
GTTTGTATCGTACCTATGAGGAATTGAAAC	CATTGTTGCCTAGTTGTTTTTTTGGTTTTACTTCTC
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATTGCCGGCGGCAAGTCTGAAGCGCCAAGAATTGACCG
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGACTGTTCGACGTAGACGTCGACAGGAGGAAAGA
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAGAAAACTTGTGAACTACCGCCACTTATAGAAGTG
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTTCTGCAACTTATGTAAACATGTAGTCGAAATCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TCTATCATGTAAACGGTAATGCATCCCATACACGCT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCTCAATTTCATTGTATCACCGGAGCAGTGGAGCGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCCCATTCAAGAATATTCACTGCTATTCACCTTCTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAATTCACATAATGCAAATGTTGCACAACTTGTAT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CCGATAAGCTAAATGTCAACGCTGAGATGATGGTAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AATCCCGCCCATTCGGCTGCCAAATCAATTCCGCCTA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TATTGTGCCAAGTGTCAATACTTTTGGTACAATATTT
GTTTGTATCGTACCTATGAGGAATTGAAAC	CAAATAGGTCTGTATACATTCTATTTTGATACAAGT
GTTTGTATCGTACCTATGAGGAATTGAAAC	TTGTGGCGACAGAACGGCGGGAATAGCAGTGTTGCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATGTAACCAGCCCATGTCATTTCTGCCTTTTGCTCCA
GTTTGTATCGTACCTATGAGGAATTGAAAC	TGAGGATAAAATACAGCAGTACCTTGAACTAGATGAG
GTTTGTATCGTACCTATGAGGAATTGAAAC	ATAAAACTATTTATTTTTTGTTCACAATTGTGTACAA
GTTTGTATCGTACCTATGAGGAATTGAAAC	AAAAATGGCGAGCAGGCAGGGGGTTAGGACCCACCC
GTTTGTATCGTACCTATGAGGAATTGAAAT	CGATTTTGCAGACAGTCAAGAAGATGCAGAACGTAAAC
GTTTGTATCGTACCTATGAGGAATTGAAAT	AGCAAATATTTGATTCAAAAATAGAGCTAGTAAAGAAT
GTTTGTATCGTACCTATGAGGAATTGAAAT	TTTTTCAAACTTGCAGGGCTAGGCAGGAATCGAACCTGC
GTTTGTATCGTACCTATGAGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009012.1\|WP_003516489.1\|731946_733014_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003516491.1\|733086_733710_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NC_009012.1\|WP_003517657.1\|703584_704469_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NC_009012.1\|WP_011837875.1\|709431_710625_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|180720
NC_009012.1\|WP_003517677.1\|714452_715637_-\|response-regulator	unknown	unknown	gnl\|CDD\|369272
NC_009012.1\|WP_011837877.1\|726132_727285_+\|IS3-like-element-IS120-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_009012.1\|WP_003516493.1\|733974_734175_+\|sulfur-carrier-protein-ThiS	unknown	unknown	gnl\|CDD\|340451
NC_009012.1\|WP_004463235.1\|705302_705941_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|153431
NC_009012.1\|WP_003517679.1\|715766_716057_+\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
NC_009012.1\|WP_003516481.1\|727659_728325_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NC_009012.1\|WP_003517659.1\|704627_705290_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NC_009012.1\|WP_011837874.1\|706079_708290_-\|glycoside-hydrolase-family-9-protein	unknown	unknown	gnl\|CDD\|376383
NC_009012.1\|WP_003512473.1\|721918_723139_-\|IS256-like-element-ISCth5-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_009012.1\|WP_011838186.1\|720605_721758_-\|IS3-like-element-IS120-family-transposase	unknown	unknown	gnl\|CDD\|222853
NC_009012.1\|WP_011837876.1\|712661_714425_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226654
NC_009012.1\|WP_003516485.1\|729767_729968_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236757
NC_009012.1\|WP_003520265.1\|710638_712405_-\|NFACT-family-protein	unknown	unknown	gnl\|CDD\|336217
NC_009012.1\|WP_003512473.1\|730555_731776_+\|IS256-like-element-ISCth5-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_009012.1\|WP_003511744.1\|723749_724820_+\|IS30-like-element-ISCth3-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_009012.1\|WP_003517666.1\|708843_709365_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380326

Protein	Function_ID	Function_description	E-value
NC_009012.1\|WP_003516491.1\|733086_733710_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	1.78459e-100
NC_009012.1\|WP_003517657.1\|703584_704469_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	4.30315e-122
NC_009012.1\|WP_011837875.1\|709431_710625_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|180720	PRK06836, PRK06836, pyridoxal phosphate-dependent aminotransferase.	0
NC_009012.1\|WP_003517677.1\|714452_715637_-\|response-regulator	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	6.24847e-40
NC_009012.1\|WP_011837877.1\|726132_727285_+\|IS3-like-element-IS120-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.36162e-46
NC_009012.1\|WP_003516493.1\|733974_734175_+\|sulfur-carrier-protein-ThiS	gnl\|CDD\|340451	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS. ThiS, also termed Thiamine biosynthesis protein (ThiaminS), is a sulfur carrier protein involved in thiamin biosynthesis in prokaryotes. It has the beta-grasp ubiquitin-like (Ubl) fold with low sequence similarity to ubiquitin (Ub), and is activated in an ATP-dependent manner by sulfurtransferases, similar to the activation mechanism of Ub-activating enzyme E1. ThiS has common evolutionary origin with Ub-related protein modifiers in eukaryotes, a beta-grasp fold as Ub, and is closely related to proteins MoaD and Urm1.	1.86858e-21
NC_009012.1\|WP_004463235.1\|705302_705941_+\|thiamine-diphosphokinase	gnl\|CDD\|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	4.43411e-84
NC_009012.1\|WP_003517679.1\|715766_716057_+\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	9.86723e-34
NC_009012.1\|WP_003516481.1\|727659_728325_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.48542e-27
NC_009012.1\|WP_003517659.1\|704627_705290_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	3.95367e-121
NC_009012.1\|WP_011837874.1\|706079_708290_-\|glycoside-hydrolase-family-9-protein	gnl\|CDD\|376383	pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9.	8.89878e-157
NC_009012.1\|WP_003512473.1\|721918_723139_-\|IS256-like-element-ISCth5-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.63539e-162
NC_009012.1\|WP_011838186.1\|720605_721758_-\|IS3-like-element-IS120-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.97567e-46
NC_009012.1\|WP_011837876.1\|712661_714425_-\|PAS-domain-S-box-protein	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	6.11524e-58
NC_009012.1\|WP_003516485.1\|729767_729968_-\|hypothetical-protein	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0.0038102
NC_009012.1\|WP_003520265.1\|710638_712405_-\|NFACT-family-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NC_009012.1\|WP_003512473.1\|730555_731776_+\|IS256-like-element-ISCth5-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	7.63539e-162
NC_009012.1\|WP_003511744.1\|723749_724820_+\|IS30-like-element-ISCth3-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.60786e-85
NC_009012.1\|WP_003517666.1\|708843_709365_+\|nitroreductase-family-protein	gnl\|CDD\|380326	cd02151, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers..	4.29927e-84

>NC_009012.1|WP_003517679.1|715766_716057_+|DUF503-domain-containing-protein
MVVGVCRVILNINEAFSLKEKRQVVKSIVERVKSRFNASVAEVGFNDKWKNAIIGISCVSNEAGHTDSMMANIVNFIENDGRVELVDYSTENIYVD
>NC_009012.1|WP_003517677.1|714452_715637_-|response-regulator
MAKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINRKKLLMENERMTQELLAHRNYLQGLHDSAAKILLNMLPKNLPDIEGFNFAVDYKSCDGVGGDMYDVCDIGDYICFYVFDVSHHGILAAVISIIIKSFLQNIEYNYRQGINKRRFPEIVLDLNLELLSNTAQNVFASLFLGFIDKNSKKLYTVSAGHIPQYIMKENGLVPLESTGPILGVFEDSTYKCAVNQLEPGDKVLLFTDGIIESPSDSSDESSDGNQIFGYENMVKVLESCKNEPISTTIDKIMKAVKDFSGNRCTDDMTILGVEVLKEN
>NC_009012.1|WP_011837876.1|712661_714425_-|PAS-domain-S-box-protein
MRKNLHINENLPEDILESIVISSTEYAIIATDIHNRIIIWNKGAELIYGYSKEEMLGKQFPPDLHRKGLPNNEFLFVPNNETKSRLIDQTMYAKRKDGTFIPISITSTPRVNKNSKTLGLLILTRDITRYKLLDQFNSVLIEITHLINSSSSIDQMCSEVCNAISSFLGLPAVFICLFDRPGNFFYINAMTGLCKNCTGHTCGYHTCAKDVAENIKGCFKTYTQLTINHSPLSEHAIYEYMEAHLPGRGENFIIHIPLISDVSIMGILHIVVSEPQKTFLLKESQILSLVANEITTGIQRKRLIEEIKEYADNLEKMVKERTRELREKDAQLVQSEKLATLGEMATGIAHEINQPLGGISLITQGLILAKKRNKLTDEMLLEKLNAIIEQVDRIDKIIGHLRTFARQSDQTKTPVNIKMPLTDVFKLIGEQLKRQQISVDMDIEENLPYVLADHNRLEQVFLNLIINAKDALNEREKVQQRLVSENDADGQIVPPDKKITIKAFSDNKHVIIEITDNGIGISKSIINKIFEPFFTTKEVGKGTGIGLSISYGIVKEFNGTIEVESEEMKGSKFIIKFPIYKENSMQK
>NC_009012.1|WP_003520265.1|710638_712405_-|NFACT-family-protein
MPFDGIVTKNIVSELSDILTGARIEKIYQPEPDEIIINLRTKGQNLKLLLSANASYPRIHLTDVTKENPINPPVFCMLLRKHLSGGKITKIDFHDFERVVTIHIETIDELGDLTFKKLVVEIMGKHSNIILVNNENKIIDSIKHVDSDISRVREVMPARPYTLPPGQDKINPLELDIDLLFSKAKEQGDPRISKFFLNNIKGFSPLLCEEICHRADVDPRLPVSSLSEDTIQNLKKVLKEIISKIENSEFTPCIIWNGDDRQKAVDFHSLEIKQYNTVDFYPSISRVLDLFYTIKDTSERLAQKKADLAKILNNCIDRCNKKISIHMDTLREVAEREKFKLYGELITANIYCIPKNASKVSLLNYYSENGEYVEVPLDENLLPQENAQRYFKKYAKAKAAYIHATQQLEEARGELSYLESVLHSLENSNSFEDIDDIRQELAEQGYLPSKKKRPEKKNSKNFTPYTYKSTDGFYIYVGKNNVQNDFLTLKFASSNDIWLHTKNIPGSHVIIRKDRGEIPDSTLFQAAMLAAYHSKAKNSSHVEVDYTKVKNVKKPNGAKPGMVIYDNYKTIIVTPDENVVNNLRMENR
>NC_009012.1|WP_011837875.1|709431_710625_-|pyridoxal-phosphate-dependent-aminotransferase
MISESVVNSLKKASWIRAMFEEGEKLRKIHGADNVYDFTLGNPDHEPPSSVKETLKKIVTEDKPGIHRYMNNAGYEDVRQKVADYLNRTSGLSSISSQHIIMTCGAAGALNVVLKTLLNPGEEVIILAPYFAEYIFYVGNHGGKVVIVPPEKDSFKPDLKILENSITEKTKAIIINSPNNPSGYIYSEETLKEIFEVLEKKEKEYNSSIYAISDEPYYKLVYDNVKLPFLFRLYKKSFIVNSFSKSLALAGERIGYIAVNPEIPELELILESLIFCNRTLGYVNAPALFQKAIADSLDADIDVESYKQRRDLIYDTLTRLGFSCIKPQGTFYIFPKSPIEDDIQFIKHAVKYNILLVPGTGFGLPGHFRLSYCVSMDIIKKSLPAFEALAKDFNLIK
>NC_009012.1|WP_003517666.1|708843_709365_+|nitroreductase-family-protein
MLYDLLKSRRSIRKFQNKEVEKEKIDIILKSALMAPSSRSRRPWEFIAVTDKEKLEKLSKIREHSSDFLAGAPLGIVVVANPKTCDVWIEDSSIAAIIIQLSAQSLGLGSCWIQVRERFGRNNKRAGDIVKEILQIPDEYEVECIIAVGYSAEEKKPYNVDELPYNKLHFESF
>NC_009012.1|WP_011837874.1|706079_708290_-|glycoside-hydrolase-family-9-protein
MKKLIITVIVSAVLLTALIPQLPVFAADYNYGEALQKAIMFYEFQMSGKLPDNIRNNWRGDSCLGDGSDVGLDLTGGWFDAGDHVKFNLPMAYTATMLAWAVYEYKDALQKSGQLGYLMDQIKWASDYFIRCHPEKYVYYYQVGNGDMDHRWWVPAECIDVQAPRPSYKVDLSNPGSTVTAGTAAALAATALVFKDTDPAYAALCIRHAKELFDFAETTMSDKGYTAALNFYTSHSGWYDELSWAGAWIYLADGDETYLEKAEKYVDKWPIESQTTYIAYSWGHCWDDVHYGAALLLAKITNKSLYKEAIERHLDYWTVGFNGQRVRYTPKGLAHLTDWGVLRHATTTAFLACVYSDWSECPREKANIYIDFAKKQADYALGSSGRSYVVGFGVNPPQHPHHRTAHSSWCDSQKVPEYHRHVLYGALVGGPDASDAYVDDIGNYVTNEVACDYNAGFVGLLAKMYEKYGGNPIPNFMAIEEKTNEEIYVEATANSNNGVELKTYLYNKSGWPARVCDKLSFRYFMDLTEYVSAGYNPNDITVSIIYSAAPTAKISKPILYDASKNIYYCEIDLSGTKIFPGSNSDHQKETQFRIQPPAGAPWDNTNDFSYQGIKKNGEVVKEMPVYEDGILIFGVEPNGTGPATPTPKPSVNPSPSPTPTSDILYGDINLDGKINSSDVTLLKRYIVKSIDVFPTADPERSLIASDVNGDGRVNSTDYSYLKRYVLKIIPTIPGNS
>NC_009012.1|WP_004463235.1|705302_705941_+|thiamine-diphosphokinase
MMYALIVCNGSIIDYSFYRKFFDEADFIVCADGGALHLQRLGIKPDVLLGDFDSIESEHLEYYMKQNVEILKFPAEKDMTDTELAVNTAIDRGYKNIVIIGGTGTRLDHTLSNIFLLKLMLDRGVKGRIINEYNEMFLINDSTEIEAEDGCYLTLLPLTSKVEGITTEGLYYPLRGEAIEMGSTRGVSNCFVEKKARISITSGILIAIKTRE
>NC_009012.1|WP_003517659.1|704627_705290_+|ribulose-phosphate-3-epimerase
MLIKIAPSILSADFSKLGEEVLRIEKAGADLVHIDVMDGHFVPNITIGPPVVKSLKKVSKLPFDVHLMIENPDMYIESFADAGADIISVHAEACRHLHRTIQKIKQLGIKAAVALNPATPLCAVEWVMEDVDMILLMTVNPGFGGQKYINGVTRKIEELERIVESRGLNIDIEVDGGIDTETVQYVTKAGANVIVSGSTIFAAEDTAKIIQELRMNSYRK
>NC_009012.1|WP_003517657.1|703584_704469_+|ribosome-small-subunit-dependent-GTPase-A
MPSGIIIKGIGGFYYVKTENGIYECKARGVFRKDSKIPLPGDEVVISVIDEEKKKGYIEEICERKIQLIRPAVANINQIALVVSVKSPLPDFVLLDKLLITVMQKELNAIICINKIDLDEGYKDVIIDCYKGTGVETVCVSSVLNVGFEQLAKMLEGKTTVFAGQSGVGKSTILNKILDSYVMETGEISDKIERGRHTTRHAELLELKSGGFVVDTPGFSSFELSEIEPKELQNYYPEFRDYIGKCRFAGCSHISEPGCMVKSALENGMINKDRYGRYIIFYNMLKDKQRRKYS
>NC_009012.1|WP_011838186.1|720605_721758_-|IS3-like-element-IS120-family-transposase
MEKRKHFTPEQKAKIVIEVIKGERTLNEIAAEYGIHPNLLSRWKTEFISNAGRVFSKETDEVEKVKQSYEKEKDELLKQIGQLSYEVAWLKKNLASSKSREDRMKMIDRNEKKLSITRQAELLSLNRTSVYYKPAPVNEEEYLIKRIIDEIYASYPEYGYRRMTSILNKDYHIHINRKRTRRYMREMGIHGFCPGPNLSKRIHGKNLYPYLLRNLKIDHPNQVWSIDVTYCRMKRGFMYMVAIIDWYSRYIVGFELSNTLDKTFVIEAIQKAIKRYGKPEIMNSDQGSQFTSDDYINLLKNNGIKISMDGKGRALDNQRIERFFRSYKWEKLYLEECETVQQLRQITKEYVEHYNHRRPHQSLDYKTPAEYYFGGYDQLLAVV
>NC_009012.1|WP_003512473.1|721918_723139_-|IS256-like-element-ISCth5-family-transposase
MATNNRMALLEQLSKYVVEKDKDFLKEALTLLINALMDAEVTSIIGAEKYERNNNRNNYRNGYRLREWDTRVGTLQLSIPKLRHGSYFPSLLEPRKMSEKALLNVVQEAYVHGVSTRKVDELVEALGMKGIDKSEVSRISKQLDEFVEEFKNRRLEGEYPYLWLDATFPKVREGGRVCSMALVIAVGVNQQGEREILGFDVGMSEDGAFWEEFLRRLVARGLKGVRLVISDAHEGLKAAIKKILTGSAWQRCRVHFMRNVLSQVPKHYQGMVSSIIRTIFAQNDQESAREQLRHVVDELKNRFPKAMKILEEAEEEILAYMAFPREHWAQIHSTNPLERLNREIRRRTDVVCIFPNREAVIRLVGAMLMEQNDEWKVGRRYFSLESMSKITSINEFTLTPVALLHK
>NC_009012.1|WP_003511744.1|723749_724820_+|IS30-like-element-ISCth3-family-transposase
MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVYEKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRLKSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSELKNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEAYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQQWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIA
>NC_009012.1|WP_011837877.1|726132_727285_+|IS3-like-element-IS120-family-transposase
MEKRKHFTPEQKAKIVIEVIKGERTLSEIAAEYGIHPNLLSRWKTEFISNAGRVFSKETDEVEKVKQSYEKEKDELLKQIGQLSYEVAWLKKNLASSKSREDRMKMIDRNEKKLSITRQAELLSLNRTSVYYKPAPVNEEEYLIKRIIDEIYASYPEYGYRRMTSILNKDYHIHINRKRTRRYMREMGIHGFCPGPNLSKRIHGKNLYPYLLRNLKIDHPNQVWSIDVTYCRMKRGFMYMVAIIDWYSRYIVGFELSNTLDKTFVIEAIQKAIKRYGKPEIMNSDQGSQFTSDDYINLLKNNGIKISMDGKGRALDNQRIERFFRSYKWEKLYLEECETVQQLRQITKEYVEHYNHRRPHQSLDYKTPAEYYFGGYDQLLAVV
>NC_009012.1|WP_003516481.1|727659_728325_+|class-I-SAM-dependent-methyltransferase
MMSIKWEQEWDRIYKEQGEVQSEILPTVKVEKDIFKRFGCKKVMDLGCGTGRHTIYLAQNGYQVFAVDISETGIEVTRAKAEKLNLTNIEFAQLDMRNLSVDDNLMDAIMCVWTSGHGTFEDARKNLKEMYRILRLGEILVIDYVSREDENYGKGTEIEKNTFINNVEGEENIPHHYFAKEEIEELYTDFSDVDINPVDYYFTDSYGTRHTIKAFVVIAVK
>NC_009012.1|WP_003516485.1|729767_729968_-|hypothetical-protein
MESIQRNKQLINKFNEIQEEILKIGWNGIIQKYHPDINCDDENSEKTFKMYKCIYENMRKRLIVNP
>NC_009012.1|WP_003512473.1|730555_731776_+|IS256-like-element-ISCth5-family-transposase
MATNNRMALLEQLSKYVVEKDKDFLKEALTLLINALMDAEVTSIIGAEKYERNNNRNNYRNGYRLREWDTRVGTLQLSIPKLRHGSYFPSLLEPRKMSEKALLNVVQEAYVHGVSTRKVDELVEALGMKGIDKSEVSRISKQLDEFVEEFKNRRLEGEYPYLWLDATFPKVREGGRVCSMALVIAVGVNQQGEREILGFDVGMSEDGAFWEEFLRRLVARGLKGVRLVISDAHEGLKAAIKKILTGSAWQRCRVHFMRNVLSQVPKHYQGMVSSIIRTIFAQNDQESAREQLRHVVDELKNRFPKAMKILEEAEEEILAYMAFPREHWAQIHSTNPLERLNREIRRRTDVVCIFPNREAVIRLVGAMLMEQNDEWKVGRRYFSLESMSKITSINEFTLTPVALLHK
>NC_009012.1|WP_003516489.1|731946_733014_+|hypothetical-protein
MKTTLILGAGFSKNSGLPIQSEIPALLTKYKENSNFERSVSLVLESFMRDVFGFEKDIYPQLDDLLTCIDISTNSEHHLGINYSPVHLKALKRLIIYRIFTILEDSFTYSKEVEKLIRFFIENRLEYTGFLVLNWDTVLEKYISAIAPKAIIDYCNGGRYLTEDLRFEEKRDGKRKVEILKVHGSCNWLYCDNCRILINDTVSRVPNIRKVGFKKSDFKLFDEMKKVTDKVFFEDVRCFICGDIVSAHIATQSYRKSFRTNSFPSIWDKAEDMLTNSEKWVFIGYSLPQADYEFKHLLKICEHKLGHKKDRRLSIDVVLFDSETTAMRYKSFFGNKINRIFNSGIGEYISYLEST
>NC_009012.1|WP_003516491.1|733086_733710_+|YihA-family-ribosome-biogenesis-GTP-binding-protein
MKLKLNLNLNNARFEITAVRPEQYPKNDLPEITFVGRSNVGKSSLINTMLNRKNLAKVAATPGRTRVINFYNIDDKLYFVDLPGYGFAKVPKTMKTGWKDIIETYLIERKQLKKVIMLVDIRHSPTSDDVLMHEWLKAMRKSYVVVATKLDKIPRTKIKERISDIRSILKLEDDVKIIPFSSETRQGRDELWDEILDESYFVESYFS
>NC_009012.1|WP_003516493.1|733974_734175_+|sulfur-carrier-protein-ThiS
MFITLNGKQTEVDNGTTLVGLIQSKGLEPESIVVEYNYEVLPREKWDSVVLKENDNLEVLRFVGGG

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Crispr_ID: NC_009012_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009012_2

1712609-1719089

Orphan

Consensus_repeat	Method
GTTTTTATCGTACCTATGAGGAATTGAAAC	PILER-CR
GTTTTTATCGTACCTATGAGGAATTGAAAC	CRISPRCasFinder
GTTTTTATCGTACCTATGAGGAATTGAAAC	CRT

96 spacers

The CRISPR arrays of NC_009012_2

>merge|NC_009012|2|1712609-1719089|PILER-CR,CRISPRCasFinder,CRT
GTTTTTATCGTACCTATGAGGAATTGAAACCTACATTGAAACTGGCAATGCTACAGAAGCAGCAGTTTTTATCGTACCTATGAGGAATTGAAACCTATCTTTGTCAAACAGCAACCACATGAAAGCGTCGGCAAGTTTTTATCGTACCTATGAGGAATTGAAACAATCTACTATAAGTCAGTATGAAACATGCAAAAGAGAACGTTTTTATCGTACCTATGAGGAATTGAAACGGCGGTGTTGGTGCACATACAAAACTTCCAAGCACAGTTTTTATCGTACCTATGAGGAATTGAAACCACCTCATATGTTCAGGCATACATTTGTTTATATGGCAGTTTTTATCGTACCTATGAGGAATTGAAACTCTTCTTAGCCTGCCACTGCTCCCATCTGAAACCTTGTTTTTATCGTACCTATGAGGAATTGAAACTAAAAATATCTTCGGTAATTGCATCCGTTTTAATTTCGTTTTTATCGTACCTATGAGGAATTGAAACATTTTAAAAAACCCATATTATATCCTCCTTTAGTTTTCGTTTTTATCGTACCTATGAGGAATTGAAACTACTTTGCTTAAGTTTTTCATAATTATCAGATTTATCGTTTTTATCGTACCTATGAGGAATTGAAACTTGTAACCGAGAATGTCCCTCCAATGTTCTAACTTTGTTTTTATCGTACCTATGAGGAATTGAAACGTGATTGCAGACCCTGTTATTATTCAAGCCGCTGAAAGTTTTTATCGTACCTATGAGGAATTGAAACAAGCCGGATTTAGTGAGGCTTTTGGTGAGTCTAATGTCGTTTTTATCGTACCTATGAGGAATTGAAACATAAACCTCAGACATATGTCACAGCAAAAGGCGTTTCCTGTTTTTATCGTACCTATGAGGAATTGAAACGCCCAAAAGGTAGCTGTAGCTGTTGCTGGCGCAATTGTTTTTATCGTACCTATGAGGAATTGAAACTTTTCCCCAGGTGACTAATTTCAGGAACTTTTGTTAATGGTTTTTATCGTACCTATGAGGAATTGAAACTCTTGATAAAATAAACAATTTTTCTGTTGTAGATAGTTTTTATCGTACCTATGAGGAATTGAAACTGATGTGACTGTTGTGGTTCTCTACTGCTGCGCCTTGTTTTTATCGTACCTATGAGGAATTGAAACATTCAAGTCTCTTTTTTTTGGTGTTGTGCTTGCGAGCGTTTTTATCGTACCTATGAGGAATTGAAACTTCTATGGTCGGAGTGACTGGATTTGAACCAGCGACCTCGTTTTTATCGTACCTATGAGGAATTGAAACAAGGCGAAATAGGTTATAGAAAAATAAGTAATATAACGTTTTTATCGTACCTATGAGGAATTGAAACAACAGGAGCAGGAAGACAATGAAGCCATGCGCCAGGGCGTTTTTATCGTACCTATGAGGAATTGAAACCCATATCACCAAGTAAATTTGTTTCAACTCCGGCACCGTTTTTATCGTACCTATGAGGAATTGAAACAGAGAAGGGTTTGTAGAAGACGACTTTTTTACTGTCAGTTTTTATCGTACCTATGAGGAATTGAAACCCGACGCTGACTTTGCCGAGTGTGAAGAATGGCTGAGTTTTTATCGTACCTATGAGGAATTGAAACCTTCACGGGAAAGGTTCTTGCTGTAATATTCGGCCATAGTTTTTATCGTACCTATGAGGAATTGAAACAGGAACAGGACTTCATACAACGTCACCGTTGAAGTGGTTTTTATCGTACCTATGAGGAATTGAAACTAAGCCATCGGGCATGACGAACCATTATCGCATAAACGTTTTTATCGTACCTATGAGGAATTGAAACATCTCCAATCCACCTCCGGTATGCGGCTGCGTCTGCGTTTTTATCGTACCTATGAGGAATTGAAACTAAAGCTCTGGTCGGTAAATGTGCGGATTGGTCGCTCTGCGTTTTTATCGTACCTATGAGGAATTGAAACAACTCACCTTCTCCCCATTTACCGGACAAACTAACCGGTTTTTATCGTACCTATGAGGAATTGAAACGGTCTAGCTGTGTACCAGAAATACTGGCACAGCTTTTCGTTTTTATCGTACCTATGAGGAATTGAAACGGACTGGCTGCAACCTTGAACATAAACTTGAGTATGGTTTTTATCGTACCTATGAGGAATTGAAACGAGAGGCCTTTTGGCCGGAGGAAGTTGTGGAGGTGGTTTTTATCGTACCTATGAGGAATTGAAACTCGCCATATCTACCACATAACCAGCGGTTGTTGCCAATGTTTTTATCGTACCTATGAGGAATTGAAACATAGCATTTCTTGAAAAAAACCGTAAAGAGTGGGGATGTTTTTATCGTACCTATGAGGAATTGAAACTTTTTTTTGCAATTCCTTGTAACCCTGCTTTGCTACTCAGTTTTTATCGTACCTATGAGGAATTGAAACTACCTTTATTAGTCGATACAACACTTAAAGTCTATGACAAGTTTTTATCGTACCTATGAGGAATTGAAACCATACAGCGATGGTAGAAAGGTGAATATTGCTTCCTGTTTTTATCGTACCTATGAGGAATTGAAACTTGCCGCACTGCCCAAAACCAGCCCAATTTTTGAACCCAGTTTTTATCGTACCTATGAGGAATTGAAACTTCGACGTAGAAAATGCAATATCTATCGGGGAATGGTACTTGTTTTTATCGTACCTATGAGGAATTGAAACCCGAACATTTTATGCTCGTAGGGTACATCTTCGCAGAGTTTTTATCGTACCTATGAGGAATTGAAACCACGGCAGCACAACCAGCCGCACGTCTGCTTTGGCTTGTTTTTATCGTACCTATGAGGAATTGAAACCCGTTTCCCACATCTGATTGAGTTGTTTGTTGATAGTTTTTATCGTACCTATGAGGAATTGAAACTGCAATGATTTCGAATTCTTTGTAACATTGACTTTGGGTTTTTATCGTACCTATGAGGAATTGAAACAACCATAAAAAAGTAAACTGAACCATAAATGATACAGTTTTTATCGTACCTATGAGGAATTGAAACTGCCCCATTCTTTTCTTCGCTCTCCTTCGCCCATTAGGTTTTTATCGTACCTATGAGGAATTGAAACACTTTTTGTCTTCACCTACCATGTCCATATTCGTCATAAGTTTTTATCGTACCTATGAGGAATTGAAACCTTTTATAAATTGAAAAGGAGGATAAGTATGTCAAACAGTTTTTATCGTACCTATGAGGAATTGAAACTACCATCTGAGGGCTATTTTGAAAGGTTCGTCAGTGGTTTTTATCGTACCTATGAGGAATTGAAACTCGGTATGCACAAAGAAGTACATACCGCAATATCTCTCGTTTTTATCGTACCTATGAGGAATTGAAACGCTGCCATTTTGACAATGGTGTTCTGCTGATCTGCGTTTTTATCGTACCTATGAGGAATTGAAACTCTCGCTCGAATAAAATTGGTACATCATATTTTTCGTTTTTATCGTACCTATGAGGAATTGAAACAATAAAAAATTTAGCATACTTTATATTGACCTTGAAGCGGTTTTTATCGTACCTATGAGGAATTGAAACTAGACATGGATTATGTGAACGTTGTGGCAGACCGGGAAAGGTTTTTATCGTACCTATGAGGAATTGAAACGACTAAGTCCTGCATCAGATGGCAATGTCGGTTCAGGTTTTTATCGTACCTATGAGGAATTGAAACAAGAAAACTGACAATGCAGAAGCACAAAGAGAAAAGGTTTTTATCGTACCTATGAGGAATTGAAACTTCACCTCCTTTTTTCATGAACTTTGGTCCTCCAAGGTTTTTATCGTACCTATGAGGAATTGAAACATCATATATGATTCATGCAATGGATGTCAATATGGATGGTTTTTATCGTACCTATGAGGAATTGAAACGGTTTATAGGCTTTTAGTTCTCCGCTGTGTATCGCTCGTTTTTATCGTACCTATGAGGAATTGAAACCCGGCTTCACCTATCATCGCGAGAGTCGGAGCGTCTACGTTTTTATCGTACCTATGAGGAATTGAAACCCTGAAAATCTTCATTCAATGCGGCTATGCCACTGCGTTTTTATCGTACCTATGAGGAATTGAAACAATAAATTTTCCTTTTCCATTTATTTACCTCCTTTTGTTTTTATCGTACCTATGAGGAATTGAAACTCAAGCATTTCTTTCGGTAATGGTTCGCCGAAATCAATCGTTTTTATCGTACCTATGAGGAATTGAAACATTTTCCTCCTTTATATGTATAAAAGACCTTTATAAGTTTTTATCGTACCTATGAGGAATTGAAACGCCATATATACACCCCCTACAGGTAGCTTGGGGCAAACTCGTTTTTATCGTACCTATGAGGAATTGAAACATCTAAACGAAGAACAATTGCAAAAGCTAAATGACTGTTTTTATCGTACCTATGAGGAATTGAAACCATTGAAACCGAATGGGTTGAAGAAGGCGGTTTCTTTAGAGTTTTTATCGTACCTATGAGGAATTGAAACTACTATCTGTAAAATACTTGTAGCCTTGTCTTTTAATTGTTTTTATCGTACCTATGAGGAATTGAAACCCAATCCATTCTTTCCGCATCTTGTACTGCTGATACCGTTTTTATCGTACCTATGAGGAATTGAAACTTTGTATAAAGTGAGGTAAATAGTAAATATATATGCGTTTTTATCGTACCTATGAGGAATTGAAACAAATCAAAGAATCGGCAAAAGGAAAGACATACGAAATTGGTTTTTATCGTACCTATGAGGAATTGAAACTGCCTGCAATGTTCTCGATGGCATTGTCGAAGATGAGGTTTTTATCGTACCTATGAGGAATTGAAACTCCTCCCCTTGCCATGTTATGGTTTCGCCCACTCTTTGTTTTTATCGTACCTATGAGGAATTGAAACTCACCGTTAGGAAAGTTGATAGTGAACACGCTGTTAGTTTTTATCGTACCTATGAGGAATTGAAACTACAATATACACAAGCAGAATTCTTACAAATAATAAGTTTTTATCGTACCTATGAGGAATTGAAACCAAAAAGGAGGAGTAGTTCGTTTTGAGGAAATAGACGCGTTTTTATCGTACCTATGAGGAATTGAAACAGTGTTCTATATGTATTTGCTTTTCCTAAGCTTTTTGGTTTTTATCGTACCTATGAGAAATTGAAACTTTGTATAAAGTGAGGTAAATAGTAAATATATATGCGTTTTTATCGTACCTATGAGGAATTGAAACCGCTTTTTGCTACTTTGATTTACGCCATTTATTATTCAATGTTTTTATCGTACCTATGAGGAATTGAAACTGAACTGCACCTATCCGCCAGTTTCCAGTCATACTGGATGTTTTTATCGTACCTATGAGGAATTGAAACTGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTTGTTTTTATCGTACCTATGAGGAATTGAAACTGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTTGTTTTTATCGTACCTATGAGGAATTGAAACGAGCCGGACGTGTGAAAAACTATATCCCGGAAGATCGTTTTTATCGTACCTATGAGGAATTGAAACTAATTAATTAGCTTAAATAAGCTATAATTAATATTGAGTTTTTATCGTACCTATGAGGAATTGAAACAAATAAAATTGTAAGAATGAGTTAAGGGGTTCAAAAGTTTTTATCGTACCTATGAGGAATTGAAACTTTCCAGGCTCAAAAATAAACCTAATCATTGTTAAAACCGTTTTTATCGTACCTATGAGGAATTGAAACTACGGACTTGCAACCGTCTATAACTTGTTGTTATAGGTTTTTATCGTACCTATGAGGAATTGAAACAATCAATTTTGCTTTTAAATAGAGTTTAATGTATACGTTTTTATCGTACCTATGAGGAATTGAAACGCATGTTTTAAACTGTCAAGTATTTTTACTTTACAGAGTTTTTATCGTACCTATGAGGAATTGAAACCGGTGGATTAAATGAGCTTTATAATCTGCTGGATAAGTTTTTATCGTACCTATGAGGAATTGAAACATCAAACCCTGATAAATAGACGGCTAGATGCCATTTGTTTTTATCGTACCTATGAGGAATTGAAACTACTTGAGTCTGTCCTTGAAGGCATGGCTGAATACTGTTTTTATCGTACCTATGAGGAATTGAAACTATAGCAAAGGACAACGAAGTAAAAGAAAACTGGAAGTTTTTATCGTACCTATGAGGAATTGAAACTCAAAAAACACTGCGTAACTCATTATGCATAACTCCGTTTTTATCGTACCTATGAGGAATTGAAACGCATCTGTCAATTTATCACGGATTGCAGTATCGATTTGTTTTTATCGTACCTATGAGGAATTGAAACGTGAATTCCGATGCTGTTTCCCTTTCGGGTAAGTTTTGTTTTTATCGTGCCTATGAGGAATTAAAAC

>NC_009012|2|2|1712609-1719022|PILER-CR
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTACATTGAAACTGGCAATGCTACAGAAGCAGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTATCTTTGTCAAACAGCAACCACATGAAAGCGTCGGCAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCTACTATAAGTCAGTATGAAACATGCAAAAGAGAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGCGGTGTTGGTGCACATACAAAACTTCCAAGCACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACCTCATATGTTCAGGCATACATTTGTTTATATGGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTCTTAGCCTGCCACTGCTCCCATCTGAAACCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAAATATCTTCGGTAATTGCATCCGTTTTAATTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTAAAAAACCCATATTATATCCTCCTTTAGTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTTGCTTAAGTTTTTCATAATTATCAGATTTATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGTAACCGAGAATGTCCCTCCAATGTTCTAACTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GTGATTGCAGACCCTGTTATTATTCAAGCCGCTGAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGCCGGATTTAGTGAGGCTTTTGGTGAGTCTAATGTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAAACCTCAGACATATGTCACAGCAAAAGGCGTTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCCAAAAGGTAGCTGTAGCTGTTGCTGGCGCAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTCCCCAGGTGACTAATTTCAGGAACTTTTGTTAATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTGATAAAATAAACAATTTTTCTGTTGTAGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATGTGACTGTTGTGGTTCTCTACTGCTGCGCCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTCAAGTCTCTTTTTTTTGGTGTTGTGCTTGCGAGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCTATGGTCGGAGTGACTGGATTTGAACCAGCGACCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGGCGAAATAGGTTATAGAAAAATAAGTAATATAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACAGGAGCAGGAAGACAATGAAGCCATGCGCCAGGGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCATATCACCAAGTAAATTTGTTTCAACTCCGGCACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGAGAAGGGTTTGTAGAAGACGACTTTTTTACTGTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGACGCTGACTTTGCCGAGTGTGAAGAATGGCTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTCACGGGAAAGGTTCTTGCTGTAATATTCGGCCATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGGAACAGGACTTCATACAACGTCACCGTTGAAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAGCCATCGGGCATGACGAACCATTATCGCATAAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTCCAATCCACCTCCGGTATGCGGCTGCGTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAGCTCTGGTCGGTAAATGTGCGGATTGGTCGCTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACTCACCTTCTCCCCATTTACCGGACAAACTAACCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTCTAGCTGTGTACCAGAAATACTGGCACAGCTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGACTGGCTGCAACCTTGAACATAAACTTGAGTATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGAGGCCTTTTGGCCGGAGGAAGTTGTGGAGGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGCCATATCTACCACATAACCAGCGGTTGTTGCCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAGCATTTCTTGAAAAAAACCGTAAAGAGTGGGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTTTTTGCAATTCCTTGTAACCCTGCTTTGCTACTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCTTTATTAGTCGATACAACACTTAAAGTCTATGACAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATACAGCGATGGTAGAAAGGTGAATATTGCTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGCCGCACTGCCCAAAACCAGCCCAATTTTTGAACCCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCGACGTAGAAAATGCAATATCTATCGGGGAATGGTACTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGAACATTTTATGCTCGTAGGGTACATCTTCGCAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACGGCAGCACAACCAGCCGCACGTCTGCTTTGGCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGTTTCCCACATCTGATTGAGTTGTTTGTTGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCAATGATTTCGAATTCTTTGTAACATTGACTTTGG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACCATAAAAAAGTAAACTGAACCATAAATGATACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCCCATTCTTTTCTTCGCTCTCCTTCGCCCATTAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ACTTTTTGTCTTCACCTACCATGTCCATATTCGTCATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTTTATAAATTGAAAAGGAGGATAAGTATGTCAAACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCATCTGAGGGCTATTTTGAAAGGTTCGTCAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGGTATGCACAAAGAAGTACATACCGCAATATCTCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCTGCCATTTTGACAATGGTGTTCTGCTGATCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTCGCTCGAATAAAATTGGTACATCATATTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAAAAATTTAGCATACTTTATATTGACCTTGAAGCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAGACATGGATTATGTGAACGTTGTGGCAGACCGGGAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GACTAAGTCCTGCATCAGATGGCAATGTCGGTTCAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGAAAACTGACAATGCAGAAGCACAAAGAGAAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCACCTCCTTTTTTCATGAACTTTGGTCCTCCAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCATATATGATTCATGCAATGGATGTCAATATGGATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTTTATAGGCTTTTAGTTCTCCGCTGTGTATCGCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGGCTTCACCTATCATCGCGAGAGTCGGAGCGTCTAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCTGAAAATCTTCATTCAATGCGGCTATGCCACTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAATTTTCCTTTTCCATTTATTTACCTCCTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAGCATTTCTTTCGGTAATGGTTCGCCGAAATCAATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTCCTCCTTTATATGTATAAAAGACCTTTATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCATATATACACCCCCTACAGGTAGCTTGGGGCAAACTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTAAACGAAGAACAATTGCAAAAGCTAAATGACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATTGAAACCGAATGGGTTGAAGAAGGCGGTTTCTTTAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTATCTGTAAAATACTTGTAGCCTTGTCTTTTAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCAATCCATTCTTTCCGCATCTTGTACTGCTGATACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATCAAAGAATCGGCAAAAGGAAAGACATACGAAATTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCTGCAATGTTCTCGATGGCATTGTCGAAGATGAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCCTCCCCTTGCCATGTTATGGTTTCGCCCACTCTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCACCGTTAGGAAAGTTGATAGTGAACACGCTGTTA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACAATATACACAAGCAGAATTCTTACAAATAATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CAAAAAGGAGGAGTAGTTCGTTTTGAGGAAATAGACGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGTGTTCTATATGTATTTGCTTTTCCTAAGCTTTTTG
GTTTTTATCGTACCTATGAGAAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGCTTTTTGCTACTTTGATTTACGCCATTTATTATTCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGAACTGCACCTATCCGCCAGTTTCCAGTCATACTGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGCCGGACGTGTGAAAAACTATATCCCGGAAGATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAATTAATTAGCTTAAATAAGCTATAATTAATATTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATAAAATTGTAAGAATGAGTTAAGGGGTTCAAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTCCAGGCTCAAAAATAAACCTAATCATTGTTAAAACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACGGACTTGCAACCGTCTATAACTTGTTGTTATAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCAATTTTGCTTTTAAATAGAGTTTAATGTATAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATGTTTTAAACTGTCAAGTATTTTTACTTTACAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGGTGGATTAAATGAGCTTTATAATCTGCTGGATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCAAACCCTGATAAATAGACGGCTAGATGCCATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTGAGTCTGTCCTTGAAGGCATGGCTGAATACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TATAGCAAAGGACAACGAAGTAAAAGAAAACTGGAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAAAAACACTGCGTAACTCATTATGCATAACTCC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATCTGTCAATTTATCACGGATTGCAGTATCGATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC

>NC_009012|2|2|1712609-1719089|CRISPRCasFinder
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTACATTGAAACTGGCAATGCTACAGAAGCAGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTATCTTTGTCAAACAGCAACCACATGAAAGCGTCGGCAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCTACTATAAGTCAGTATGAAACATGCAAAAGAGAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGCGGTGTTGGTGCACATACAAAACTTCCAAGCACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACCTCATATGTTCAGGCATACATTTGTTTATATGGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTCTTAGCCTGCCACTGCTCCCATCTGAAACCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAAATATCTTCGGTAATTGCATCCGTTTTAATTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTAAAAAACCCATATTATATCCTCCTTTAGTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTTGCTTAAGTTTTTCATAATTATCAGATTTATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGTAACCGAGAATGTCCCTCCAATGTTCTAACTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GTGATTGCAGACCCTGTTATTATTCAAGCCGCTGAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGCCGGATTTAGTGAGGCTTTTGGTGAGTCTAATGTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAAACCTCAGACATATGTCACAGCAAAAGGCGTTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCCAAAAGGTAGCTGTAGCTGTTGCTGGCGCAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTCCCCAGGTGACTAATTTCAGGAACTTTTGTTAATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTGATAAAATAAACAATTTTTCTGTTGTAGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATGTGACTGTTGTGGTTCTCTACTGCTGCGCCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTCAAGTCTCTTTTTTTTGGTGTTGTGCTTGCGAGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCTATGGTCGGAGTGACTGGATTTGAACCAGCGACCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGGCGAAATAGGTTATAGAAAAATAAGTAATATAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACAGGAGCAGGAAGACAATGAAGCCATGCGCCAGGGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCATATCACCAAGTAAATTTGTTTCAACTCCGGCACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGAGAAGGGTTTGTAGAAGACGACTTTTTTACTGTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGACGCTGACTTTGCCGAGTGTGAAGAATGGCTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTCACGGGAAAGGTTCTTGCTGTAATATTCGGCCATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGGAACAGGACTTCATACAACGTCACCGTTGAAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAGCCATCGGGCATGACGAACCATTATCGCATAAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTCCAATCCACCTCCGGTATGCGGCTGCGTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAGCTCTGGTCGGTAAATGTGCGGATTGGTCGCTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACTCACCTTCTCCCCATTTACCGGACAAACTAACCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTCTAGCTGTGTACCAGAAATACTGGCACAGCTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGACTGGCTGCAACCTTGAACATAAACTTGAGTATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGAGGCCTTTTGGCCGGAGGAAGTTGTGGAGGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGCCATATCTACCACATAACCAGCGGTTGTTGCCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAGCATTTCTTGAAAAAAACCGTAAAGAGTGGGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTTTTTGCAATTCCTTGTAACCCTGCTTTGCTACTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCTTTATTAGTCGATACAACACTTAAAGTCTATGACAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATACAGCGATGGTAGAAAGGTGAATATTGCTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGCCGCACTGCCCAAAACCAGCCCAATTTTTGAACCCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCGACGTAGAAAATGCAATATCTATCGGGGAATGGTACTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGAACATTTTATGCTCGTAGGGTACATCTTCGCAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACGGCAGCACAACCAGCCGCACGTCTGCTTTGGCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGTTTCCCACATCTGATTGAGTTGTTTGTTGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCAATGATTTCGAATTCTTTGTAACATTGACTTTGG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACCATAAAAAAGTAAACTGAACCATAAATGATACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCCCATTCTTTTCTTCGCTCTCCTTCGCCCATTAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ACTTTTTGTCTTCACCTACCATGTCCATATTCGTCATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTTTATAAATTGAAAAGGAGGATAAGTATGTCAAACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCATCTGAGGGCTATTTTGAAAGGTTCGTCAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGGTATGCACAAAGAAGTACATACCGCAATATCTCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCTGCCATTTTGACAATGGTGTTCTGCTGATCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTCGCTCGAATAAAATTGGTACATCATATTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAAAAATTTAGCATACTTTATATTGACCTTGAAGCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAGACATGGATTATGTGAACGTTGTGGCAGACCGGGAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GACTAAGTCCTGCATCAGATGGCAATGTCGGTTCAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGAAAACTGACAATGCAGAAGCACAAAGAGAAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCACCTCCTTTTTTCATGAACTTTGGTCCTCCAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCATATATGATTCATGCAATGGATGTCAATATGGATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTTTATAGGCTTTTAGTTCTCCGCTGTGTATCGCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGGCTTCACCTATCATCGCGAGAGTCGGAGCGTCTAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCTGAAAATCTTCATTCAATGCGGCTATGCCACTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAATTTTCCTTTTCCATTTATTTACCTCCTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAGCATTTCTTTCGGTAATGGTTCGCCGAAATCAATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTCCTCCTTTATATGTATAAAAGACCTTTATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCATATATACACCCCCTACAGGTAGCTTGGGGCAAACTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTAAACGAAGAACAATTGCAAAAGCTAAATGACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATTGAAACCGAATGGGTTGAAGAAGGCGGTTTCTTTAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTATCTGTAAAATACTTGTAGCCTTGTCTTTTAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCAATCCATTCTTTCCGCATCTTGTACTGCTGATACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATCAAAGAATCGGCAAAAGGAAAGACATACGAAATTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCTGCAATGTTCTCGATGGCATTGTCGAAGATGAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCCTCCCCTTGCCATGTTATGGTTTCGCCCACTCTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCACCGTTAGGAAAGTTGATAGTGAACACGCTGTTA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACAATATACACAAGCAGAATTCTTACAAATAATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CAAAAAGGAGGAGTAGTTCGTTTTGAGGAAATAGACGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGTGTTCTATATGTATTTGCTTTTCCTAAGCTTTTTG
GTTTTTATCGTACCTATGAGAAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGCTTTTTGCTACTTTGATTTACGCCATTTATTATTCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGAACTGCACCTATCCGCCAGTTTCCAGTCATACTGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGCCGGACGTGTGAAAAACTATATCCCGGAAGATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAATTAATTAGCTTAAATAAGCTATAATTAATATTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATAAAATTGTAAGAATGAGTTAAGGGGTTCAAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTCCAGGCTCAAAAATAAACCTAATCATTGTTAAAACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACGGACTTGCAACCGTCTATAACTTGTTGTTATAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCAATTTTGCTTTTAAATAGAGTTTAATGTATAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATGTTTTAAACTGTCAAGTATTTTTACTTTACAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGGTGGATTAAATGAGCTTTATAATCTGCTGGATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCAAACCCTGATAAATAGACGGCTAGATGCCATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTGAGTCTGTCCTTGAAGGCATGGCTGAATACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TATAGCAAAGGACAACGAAGTAAAAGAAAACTGGAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAAAAACACTGCGTAACTCATTATGCATAACTCC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATCTGTCAATTTATCACGGATTGCAGTATCGATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GTGAATTCCGATGCTGTTTCCCTTTCGGGTAAGTTTT
GTTTTTATCGTGCCTATGAGGAATTAAAAC

>NC_009012|2|2|1712609-1719089|CRT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTACATTGAAACTGGCAATGCTACAGAAGCAGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTATCTTTGTCAAACAGCAACCACATGAAAGCGTCGGCAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCTACTATAAGTCAGTATGAAACATGCAAAAGAGAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGCGGTGTTGGTGCACATACAAAACTTCCAAGCACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACCTCATATGTTCAGGCATACATTTGTTTATATGGCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTCTTAGCCTGCCACTGCTCCCATCTGAAACCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAAATATCTTCGGTAATTGCATCCGTTTTAATTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTAAAAAACCCATATTATATCCTCCTTTAGTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTTGCTTAAGTTTTTCATAATTATCAGATTTATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGTAACCGAGAATGTCCCTCCAATGTTCTAACTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GTGATTGCAGACCCTGTTATTATTCAAGCCGCTGAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGCCGGATTTAGTGAGGCTTTTGGTGAGTCTAATGTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAAACCTCAGACATATGTCACAGCAAAAGGCGTTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCCAAAAGGTAGCTGTAGCTGTTGCTGGCGCAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTCCCCAGGTGACTAATTTCAGGAACTTTTGTTAATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTTGATAAAATAAACAATTTTTCTGTTGTAGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATGTGACTGTTGTGGTTCTCTACTGCTGCGCCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTCAAGTCTCTTTTTTTTGGTGTTGTGCTTGCGAGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCTATGGTCGGAGTGACTGGATTTGAACCAGCGACCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGGCGAAATAGGTTATAGAAAAATAAGTAATATAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACAGGAGCAGGAAGACAATGAAGCCATGCGCCAGGGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCATATCACCAAGTAAATTTGTTTCAACTCCGGCACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGAGAAGGGTTTGTAGAAGACGACTTTTTTACTGTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGACGCTGACTTTGCCGAGTGTGAAGAATGGCTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTCACGGGAAAGGTTCTTGCTGTAATATTCGGCCATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGGAACAGGACTTCATACAACGTCACCGTTGAAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAGCCATCGGGCATGACGAACCATTATCGCATAAAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTCCAATCCACCTCCGGTATGCGGCTGCGTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAAAGCTCTGGTCGGTAAATGTGCGGATTGGTCGCTCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACTCACCTTCTCCCCATTTACCGGACAAACTAACCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTCTAGCTGTGTACCAGAAATACTGGCACAGCTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGACTGGCTGCAACCTTGAACATAAACTTGAGTATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGAGGCCTTTTGGCCGGAGGAAGTTGTGGAGGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGCCATATCTACCACATAACCAGCGGTTGTTGCCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATAGCATTTCTTGAAAAAAACCGTAAAGAGTGGGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTTTTTTGCAATTCCTTGTAACCCTGCTTTGCTACTCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCTTTATTAGTCGATACAACACTTAAAGTCTATGACAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATACAGCGATGGTAGAAAGGTGAATATTGCTTCCT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTGCCGCACTGCCCAAAACCAGCCCAATTTTTGAACCCA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCGACGTAGAAAATGCAATATCTATCGGGGAATGGTACTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGAACATTTTATGCTCGTAGGGTACATCTTCGCAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CACGGCAGCACAACCAGCCGCACGTCTGCTTTGGCTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGTTTCCCACATCTGATTGAGTTGTTTGTTGATA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCAATGATTTCGAATTCTTTGTAACATTGACTTTGG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AACCATAAAAAAGTAAACTGAACCATAAATGATACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCCCATTCTTTTCTTCGCTCTCCTTCGCCCATTAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ACTTTTTGTCTTCACCTACCATGTCCATATTCGTCATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CTTTTATAAATTGAAAAGGAGGATAAGTATGTCAAACA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACCATCTGAGGGCTATTTTGAAAGGTTCGTCAGTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCGGTATGCACAAAGAAGTACATACCGCAATATCTCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCTGCCATTTTGACAATGGTGTTCTGCTGATCTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCTCGCTCGAATAAAATTGGTACATCATATTTTTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAAAAATTTAGCATACTTTATATTGACCTTGAAGCG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAGACATGGATTATGTGAACGTTGTGGCAGACCGGGAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GACTAAGTCCTGCATCAGATGGCAATGTCGGTTCAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAGAAAACTGACAATGCAGAAGCACAAAGAGAAAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTCACCTCCTTTTTTCATGAACTTTGGTCCTCCAAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCATATATGATTCATGCAATGGATGTCAATATGGATG
GTTTTTATCGTACCTATGAGGAATTGAAAC	GGTTTATAGGCTTTTAGTTCTCCGCTGTGTATCGCTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCGGCTTCACCTATCATCGCGAGAGTCGGAGCGTCTAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCTGAAAATCTTCATTCAATGCGGCTATGCCACTGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATAAATTTTCCTTTTCCATTTATTTACCTCCTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAGCATTTCTTTCGGTAATGGTTCGCCGAAATCAATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATTTTCCTCCTTTATATGTATAAAAGACCTTTATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCCATATATACACCCCCTACAGGTAGCTTGGGGCAAACTC
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCTAAACGAAGAACAATTGCAAAAGCTAAATGACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CATTGAAACCGAATGGGTTGAAGAAGGCGGTTTCTTTAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTATCTGTAAAATACTTGTAGCCTTGTCTTTTAATT
GTTTTTATCGTACCTATGAGGAATTGAAAC	CCAATCCATTCTTTCCGCATCTTGTACTGCTGATACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATCAAAGAATCGGCAAAAGGAAAGACATACGAAATTG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGCCTGCAATGTTCTCGATGGCATTGTCGAAGATGAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCCTCCCCTTGCCATGTTATGGTTTCGCCCACTCTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCACCGTTAGGAAAGTTGATAGTGAACACGCTGTTA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACAATATACACAAGCAGAATTCTTACAAATAATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CAAAAAGGAGGAGTAGTTCGTTTTGAGGAAATAGACGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	AGTGTTCTATATGTATTTGCTTTTCCTAAGCTTTTTG
GTTTTTATCGTACCTATGAGAAATTGAAAC	TTTGTATAAAGTGAGGTAAATAGTAAATATATATGC
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGCTTTTTGCTACTTTGATTTACGCCATTTATTATTCAAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGAACTGCACCTATCCGCCAGTTTCCAGTCATACTGGAT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TGATTTTTAATGTATTGTAATATTTCCATTTCCTTTTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GAGCCGGACGTGTGAAAAACTATATCCCGGAAGATC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TAATTAATTAGCTTAAATAAGCTATAATTAATATTGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	AAATAAAATTGTAAGAATGAGTTAAGGGGTTCAAAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TTTCCAGGCTCAAAAATAAACCTAATCATTGTTAAAACC
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACGGACTTGCAACCGTCTATAACTTGTTGTTATAG
GTTTTTATCGTACCTATGAGGAATTGAAAC	AATCAATTTTGCTTTTAAATAGAGTTTAATGTATAC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATGTTTTAAACTGTCAAGTATTTTTACTTTACAGA
GTTTTTATCGTACCTATGAGGAATTGAAAC	CGGTGGATTAAATGAGCTTTATAATCTGCTGGATAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	ATCAAACCCTGATAAATAGACGGCTAGATGCCATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TACTTGAGTCTGTCCTTGAAGGCATGGCTGAATACT
GTTTTTATCGTACCTATGAGGAATTGAAAC	TATAGCAAAGGACAACGAAGTAAAAGAAAACTGGAA
GTTTTTATCGTACCTATGAGGAATTGAAAC	TCAAAAAACACTGCGTAACTCATTATGCATAACTCC
GTTTTTATCGTACCTATGAGGAATTGAAAC	GCATCTGTCAATTTATCACGGATTGCAGTATCGATTT
GTTTTTATCGTACCTATGAGGAATTGAAAC	GTGAATTCCGATGCTGTTTCCCTTTCGGGTAAGTTTT
GTTTTTATCGTGCCTATGAGGAATTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009012.1\|WP_003518251.1\|1698327_1699863_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
NC_009012.1\|WP_003518285.1\|1720338_1720578_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NC_009012.1\|WP_003518283.1\|1719699_1720179_-\|transcriptional-regulator-MntR	unknown	unknown	gnl\|CDD\|179669
NC_009012.1\|WP_003518272.1\|1710972_1712220_-\|glycosyl-hydrolase-53-family-protein	unknown	unknown	gnl\|CDD\|311610
NC_009012.1\|WP_003511744.1\|1700857_1701928_-\|IS30-like-element-ISCth3-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_009012.1\|WP_003518268.1\|1707537_1710066_-\|xyloglucanase-Xgh74A	unknown	unknown	gnl\|CDD\|271215
NC_009012.1\|WP_004463800.1\|1725726_1726413_-\|polyphosphate-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143622
NC_009012.1\|WP_003518263.1\|1704900_1706445_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|197257
NC_009012.1\|WP_004463798.1\|1725010_1725697_-\|DUF4956-domain-containing-protein	unknown	unknown	gnl\|CDD\|379819
NC_009012.1\|WP_003518298.1\|1726588_1727287_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NC_009012.1\|WP_003518261.1\|1704624_1704816_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224042
NC_009012.1\|WP_003518280.1\|1719334_1719667_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_011838070.1\|1702078_1703848_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380161
NC_009012.1\|WP_003518300.1\|1727291_1728761_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NC_009012.1\|WP_004463804.1\|1728802_1729753_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NC_009012.1\|WP_011838074.1\|1722842_1724972_-\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NC_009012.1\|WP_011838073.1\|1720660_1722811_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NC_009012.1\|WP_003518265.1\|1706484_1707303_-\|glycosyltransferase-family-8-protein	unknown	unknown	gnl\|CDD\|133037
NC_009012.1\|WP_003518270.1\|1710414_1710861_-\|C-GCAxxG-C-C-family-protein	unknown	unknown	gnl\|CDD\|378246
NC_009012.1\|WP_011838071.1\|1703850_1704561_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NC_009012.1\|WP_003518251.1\|1698327_1699863_-\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NC_009012.1\|WP_003518285.1\|1720338_1720578_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.46103e-18
NC_009012.1\|WP_003518283.1\|1719699_1720179_-\|transcriptional-regulator-MntR	gnl\|CDD\|179669	PRK03902, PRK03902, transcriptional regulator MntR.	3.12796e-41
NC_009012.1\|WP_003518272.1\|1710972_1712220_-\|glycosyl-hydrolase-53-family-protein	gnl\|CDD\|311610	pfam07745, Glyco_hydro_53, Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold.	2.77546e-122
NC_009012.1\|WP_003511744.1\|1700857_1701928_-\|IS30-like-element-ISCth3-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.60786e-85
NC_009012.1\|WP_003518268.1\|1707537_1710066_-\|xyloglucanase-Xgh74A	gnl\|CDD\|271215	cd14256, Dockerin_I, Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.	1.45828e-20
NC_009012.1\|WP_004463800.1\|1725726_1726413_-\|polyphosphate-polymerase-domain-containing-protein	gnl\|CDD\|143622	cd07750, PolyPPase_VTC_like, Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, -3 and- 4, and similar proteins. Saccharomyces cerevisiae VTC-1, -2, -3, and -4 comprise the membrane-integral VTC complex. VTC-2, -3, and -4 contain polyP polymerase domains. For S. cerevisiae VTC4 it has been shown that this domain generates polyP from ATP by a phosphotransfer reaction releasing ADP. This activity is metal ion-dependent. The ATP gamma phosphate may be cleaved and then transferred to an acceptor phosphate to form polyP. PolyP is ubiquitous. In prokaryotes, it is a store of phosphate and energy. In eukaryotes, polyPs have roles in bone calcification, and osmoregulation, and in phosphate transport in the symbiosis of mycorrhizal fungi and plants. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.1215e-59
NC_009012.1\|WP_003518263.1\|1704900_1706445_-\|cardiolipin-synthase	gnl\|CDD\|197257	cd09160, PLDc_SMU_988_like_2, Putative catalytic domain, repeat 2, of Streptococcus mutans uncharacterized protein SMU_988 and similar proteins. Putative catalytic domain, repeat 2, of Streptococcus mutans uncharacterized protein SMU_988 and similar proteins. Although SMU_988 and similar proteins have not been functionally characterized, members in this subfamily show high sequence homology to bacterial cardiolipin (CL) synthases, which catalyze the reversible phosphatidyl group transfer between two phosphatidylglycerol molecules to form CL and glycerol. Members of this subfamily contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the phospholipase D (PLD) superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.	9.51237e-109
NC_009012.1\|WP_004463798.1\|1725010_1725697_-\|DUF4956-domain-containing-protein	gnl\|CDD\|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	3.71516e-11
NC_009012.1\|WP_003518298.1\|1726588_1727287_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.89995e-79
NC_009012.1\|WP_003518261.1\|1704624_1704816_-\|hypothetical-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	2.80198e-19
NC_009012.1\|WP_003518300.1\|1727291_1728761_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.90104e-53
NC_009012.1\|WP_011838070.1\|1702078_1703848_-\|HAMP-domain-containing-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	2.71872e-92
NC_009012.1\|WP_004463804.1\|1728802_1729753_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.77618e-79
NC_009012.1\|WP_011838074.1\|1722842_1724972_-\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	2.79356e-34
NC_009012.1\|WP_011838073.1\|1720660_1722811_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	1.61703e-150
NC_009012.1\|WP_003518265.1\|1706484_1707303_-\|glycosyltransferase-family-8-protein	gnl\|CDD\|133037	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.	1.79681e-77
NC_009012.1\|WP_003518270.1\|1710414_1710861_-\|C-GCAxxG-C-C-family-protein	gnl\|CDD\|378246	pfam09719, C_GCAxxG_C_C, Putative redox-active protein (C_GCAxxG_C_C). This entry represents a putative redox-active protein of about 140 residues, with four perfectly conserved Cys residues. It includes a CGAXXG motif. Most members are found within one or two loci of transporter or oxidoreductase genes. A member from Geobacter sulfurreducens, located in a molybdenum transporter operon, has a TAT (twin-arginine translocation) signal sequence for Sec-independent transport across the plasma membrane, a hallmark of bound prosthetic groups such as FeS clusters.	1.03559e-43
NC_009012.1\|WP_011838071.1\|1703850_1704561_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.64896e-88

>NC_009012.1|WP_003518272.1|1710972_1712220_-|glycosyl-hydrolase-53-family-protein
MLSKITKLTVIFILILSVTFLSMPKTYTQAAPTFAKGADVSWLPEMEANGYKFYNDDGIEQDCLQILKDHGIDSIRLRVWVNPPNGYCNKEETIKMALRAKKMGFRIMINFHYSDSWADPGKQTKPAAWAKYDFNGLMKAVYDYTYDVMSALKANGITPEWVQVGNETNNGMLWEDGKATNSMRNFAWLINCGYDAVKAVSPETKVIVHIANGYDNALYRWIFDGITANGARFDVIGMSLYPTASDWPQLTNQCLNNMKDMISRYGKEIMICEIGMDYWEAQACKDFITDIIQKTKSLPDNKGLGVFYWEPQCYNWQYYNKGAFDLSGKPTIALDAFLTSDTPDNLIYGDLNGDGRVNSTDYTLLKRYLLGAIQTFPYERGIKAADLNLDGRINSTDYTVLKRYLLNAIPSLPVK
>NC_009012.1|WP_003518270.1|1710414_1710861_-|C-GCAxxG-C-C-family-protein
MNGKSERAVELFKEGYNCSQAVLAAYCEDVGIDMKTALMIASPFGGGIGRLREVCGAASAMFMIAGLKYGYVDPKDMNAKKEHYELVQKLVERFKEENGSIICRELLGLNVVHDKPEPEKRTEGYYKKRPCAEIVRSAAEIVDELLKT
>NC_009012.1|WP_003518268.1|1707537_1710066_-|xyloglucanase-Xgh74A
MVKKFTSKIKAAVFAAVVAATAIFGPAISSQAVTSVPYKWDNVVIGGGGGFMPGIVFNETEKDLIYARADIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIAAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRSTDGGATWKNIWEWGMYPERILHYEIDISAAPWLDWGTEKQLPEINPKLGWMIGDIEIDPFNSDRMMYVTGATIYGCDNLTDWDRGGKVKIEVKATGIEECAVLDLVSPPEGAPLVSAVGDLVGFVHDDLKVGPKKMHVPSYSSGTGIDYAELVPNFMALVAKADLYDVKKISFSYDGGRNWFQPPNEAPNSVGGGSVAVAADAKSVIWTPENASPAVTTDNGNSWKVCTNLGMGAVVASDRVNGKKFYAFYNGKFYISTDGGLTFTDTKAPQLPKSVNKIKAVPGKEGHVWLAAREGGLWRSTDGGYTFEKLSNVDTAHVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRINDDEHGYGAVDTAITGDPRVYGRVYIATNGRGIVYGEPASDEPVPTPPQVDKGLVGDLNGDNRINSTDLTLMKRYILKSIEDLPVEDDLWAADINGDGKINSTDYTYLKKYLLQAIPELPKK
>NC_009012.1|WP_003518265.1|1706484_1707303_-|glycosyltransferase-family-8-protein
MKSILVTLDSNYLKPLKVMLKSLFINNPNEEFDIYLMHSSIKEEELEDLDRFIEAEGGRLKIVQINDSYFEDAPTLLHYTKAMYYRLLAFKFLPEELDRILYLDPDILVINPIDELYNMDIDNYLYAAAYHNIITIKRINRIRLNAYDIKEYYNSGVLLMNLKLQRETISEEEIFDFVKNNRSKLIMPDQDIINSLYSKKIKSIDEKLYNYDARYYSYYKITSNGKCDMDYVINNTVFIHFCGKKKPWKKSYSGKFHSLYKHYEKLAMNTKY
>NC_009012.1|WP_003518263.1|1704900_1706445_-|cardiolipin-synthase
MWSRIKSIVKFLYHRVVLISLAILIQLIALVSVVLKFNDYFVFFYWACLIISMIAVFLILNGKSNPSYKIAWIIPILLFPIFGGLFYIFFGGKKLSRRERRKLKSIGMKVENALVLQPEVLSEIMLHDDGAAVQSRYIQNVAHYPPHKNSTAEYLSIGEKKYEKLKEELKKAKHFIFMEYFIIQEGIMWNSILEILVEKAKNGVDVRLIYDDMGCLLFLPRNYNKKLESMGIKCCVFNPVSPILSAKINNRDHRKIAIIDGHTAFTGGINLADEYINEIKKHGHWKDTAIMIKGEAVWNMTVMFLSMWDYLRGIEEDFEKFRYKFKKESEIEDGYFQPFSDSPFDDETVGETVYLNLLNKAKRYVYITTPYLVIDYKMTQALASAAKSGIDVRIITPHIEDKWYVHAVTRSNYRFLVESGVKIYEYTPGFIHSKTLVSDDEYAVVGTINMDYRSFYLHFECGVWTYKSKSVLDIKEDFLSTLDVCTEITMDMIKKTKWYKTLIGTLLRVFAPLM
>NC_009012.1|WP_003518261.1|1704624_1704816_-|hypothetical-protein
MNDLLNDAKTTEKVYFHSLNVYKEYDIVELRKRVGMVFQKPNPFPMEIQMASCCKIQVIVKYI
>NC_009012.1|WP_011838071.1|1703850_1704561_-|response-regulator-transcription-factor
MAKKLIYIVEDEKHIQELLRFNLEENGYEVECFEDGETMFEVVERKKPDLFVLDIMLPGVDGFEICKKIKENYDLKKIPIIMLTAKNDELDRVLGLELGADDYISKPFSVREFVARVKVAFRRQADSFENSPKRVNVGRITIDFERREVYKDNQIIEMTFKEFELLKLLIMNRGKVLSRDMLLQKIWGFDFFGETRTVDVHIRYLRQKIEDDDNNPVYIETVRCIGYRFSDKEVRE
>NC_009012.1|WP_011838070.1|1702078_1703848_-|HAMP-domain-containing-protein
MKKKIFKYYLLLILIILSVTVIFIPKVSRKFYTQEVENKLEGIAFSIEYYLLNEAKNGEIDFDFIAKDYAAKYNQNSTFQGESLRITFISYDGKVLGDSDANFNQMENHLSRKEIQDALKGNVGKDIRSSKTLKLDLLYMAIPVEELNVIARVSVPLVQIKKINRLIWLYSILIFIMALIITVIVSLRIAGLVIRPLNDIISVSKEITNGNYSRRIKLKSKDELGQLAVHFNKMASKLERTISDLNTKKIELESIVESITNGIVAVDGNNKVILINPAAFTVFNLDADAEILGDDIENHIKNSQINSLLKDAIQKNKPLEAEVAIDGRVLLVNASPIRPKDSDIDNSGGIVFIQDITKVRKLEQIRTEFVSNVTHELKTPITPIRGFIETLKNGAMNNPVVAERFLEIIDIEAERLHELINDILLLSEIETKLKDTNLEIFDLKSMVDDVFKVMQNIAKEKKISLNNNVRDEVLMKANINRMKQLIMNLVDNGIKYNVQNGSVSVDGYREDGKVVISVKDTGIGIPSAHIPRIFERFYRVDKGRSRGMGGTGLGLSIVKHIVNLYNGEIKVNSVVGEGTEFIVKIPCQP
>NC_009012.1|WP_003511744.1|1700857_1701928_-|IS30-like-element-ISCth3-family-transposase
MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVYEKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRLKSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSELKNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEAYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQQWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIA
>NC_009012.1|WP_003518251.1|1698327_1699863_-|2-isopropylmalate-synthase
MRRIRIFDTTLRDGEQTPGVNLNIQEKVDIAKQLARLGVDVIEPGFPLTSPGDFEAVQRIAREVEGPYICGFSRAIIRDIDETWKAIKDAQKKCFHIFISSSDIQIKHQLGKTEKDVLEIVKSTVYHAKQYTDEVEYSPMDASRTRLEFLYEVIEAAIDNGATVINIPDTVGYATPIEFGELIQKIRKNVRNIDKAIISVHCHNDLGMAVANSIVAAMNGAQQIECTINGVGERAGNAALEEVVTHIAARKDYLGFETGIDLSQLYKTSKIVSRYMGIPIPVNKPIVGKNVFTHESGIHQDGVLKERSTYEVIDPRLVGRDDSVILLGKHSGRHALKVEAEKLGYDLDEERLNKLFNDFKKLTDVKKNVTTADLESLIIESAAKAVEEAYVLEKIRVVSGNIETPSAKVVIKDSKGNLLEAEQTGNGPVDAVFKAINSVIKETENLTLYKYSVSAVTEEMESLGEVSVTLREKEKLYTGIGTHTDIITSSAIAYIDAINKAIAANARAQKN
>NC_009012.1|WP_003518280.1|1719334_1719667_+|hypothetical-protein
MLNEVDYLDDILAKFVDVGVSGATILHSQGMASAIVNSENNKISLFSALKSIIENIRPYNKTIFTVLESEELVEKAVSAVQSVIGKAPTSGVGFMFTVPIGKIYPMGLQE
>NC_009012.1|WP_003518283.1|1719699_1720179_-|transcriptional-regulator-MntR
MENSEFHTVRGYQLIEQEKKLLTSAMEDYLEMIFRNIKKEGYMRINTLAEMLNVRPSSATKMVQKLSEKGFVEYKRYGIITLTEKGKALGEFLLKRHNIIEKFLRSIGISDNLLIETELIEHNLSVDTLRSIDELNSFFEEYPEILEKFRRYKNKKAKK
>NC_009012.1|WP_003518285.1|1720338_1720578_+|ferrous-iron-transport-protein-A
MAGKQITLASLPIGKKARVKSLTLDGTIRRRIMDLGLVSDTIVEALQKSPSGDPTAYHIRGAVIALRSEEASKIMVEVN
>NC_009012.1|WP_011838073.1|1720660_1722811_+|ferrous-iron-transport-protein-B
MGLTSQSTGAGVLENKLTIVKSTPVDKVIALAGNPNVGKSTVFNSLTGLNQHTGNWPGKTVTNAQGRYKHKDKNFIMVDIPGTYSLMANSVEEEVARDFVCFGQPDATVVVTDATCLERNLNLVLQTLEITNKVVVCVNLIDEAERKKIKIDYNKLSKHLGVPVIPTNARSNKGLDKLMDAVYEISTKETTSHPIKITYDDIVEEAIKMIQPKIETIAGEKINSRWVALKLLDNDGALLESLNNFLGFNLLDDNELAELVDMAKKHLLNNGIGQNQLRDKIVTRLVKIAEEICQSVITFENKQYDHLDRKIDKILTSRVFGIPVMLAMLGVIFWITITGANYPSQMLSTLFFWIEERLTDFFVWAKAPKWLHGLLVTGAYRTLAWVVSVMLPPMAIFFPLFTLLEDLGYLPRVAFNLDNFFKKACAHGKQSLTMCMGFGCNAAGVIGCRIIDSPRERLIATITNNFVPCNGRFPTLIAIITMFFVGNFAGFSQSVLSTLFLTGVILLGIVMTLLVSKLLSKTILKGLPSSFALELPPYRKPQIGRIIVRSIFDRTLFVLGRAVSVAIPAGFVIWIMANIYVGEQSLLSLCAGFLDPFARLIGLDGYILMAFILGFPANEIVVPIIIMSYMSSESMMELENLNQLKQLLVDNGWTWVTALCVMLFSLMHWPCSTTCLTIRKETQSWKWTLVSFLVPTLSGIVICFIVANLARLLALV
>NC_009012.1|WP_011838074.1|1722842_1724972_-|CotH-kinase-family-protein
MDENVNPKMVFKIVVTILCIALLITGMALVPKAFPNAAEADAQPDYIYKIFNDNVVNEINIEMDENDFEWLLENATLEEYRSCNITINGETFYNVGIRPKGNSSLSQIARSDSKRFSFKLDFSEYIDGQTYYGAEKIVLNNIMSDKTYMKEYLSYKLFDFMGVPSSACAYSNIRINGKDWGLYLAVEVIDESYIERHFGSVNGNLYKPEAMEIGGDRGEERGGQQNGGPNAMPFMRGRREQMQNAPGAEQRQNEAGREQVPNQFGMRQMPGGIEREQMPDRPGREEISNRDGTKQIQNQETKEQNSNESGMQQIPNGFGAQGRFGGFIGGFGRMGARGGADLKYIDDSPSSYWAIRNNAVFRTTTDADFKKVIEMIKKLNEGTDLEKYLDVDEILRFWAVNTFLVNLDGYSGGMYHNYYLYEENGVFSILPWDFNLSFAGFGINDASRAVNFPIDNPVTGNLENAPLIGKLLEVPEYKERYHGYLREIVEKYIYSGVYENSINRINALISDYVKNDATAFYTFEEYQKGVQAILTFGKDRAKSILAQLEGSQPSTSYGSIETTLNLSDMGGMGGMRGGMQPPRNMQIPDGMQIPGDMRMPNGIQMPDDMQMPDGMQIPGGMRMPDGMQIPDGMQMPDGGQMPNGMQMPNGMQMPNGMQPPGNMRFRGGMEMFRDNQQSETQSTVLILSVAALIPGLIFVAKFKRRKYRA
>NC_009012.1|WP_004463798.1|1725010_1725697_-|DUF4956-domain-containing-protein
MRNQINFNDIFKSSFLEKVSSVSLLDAAIAFGLAFCIGLFIYFVYKKTYKGVMYSRTFSISLIALTMITTLMILAVTSNVVLSLGMVGALSIVRFRSAIKDPMDIAYLFWSIAVGIVLGAGLIPLAVFGSLFIGIILVLFVNRNSIDNPYILVVNCEDDKAESNVMNIIKDKVRKYVVKSKTITGGKGIEVAVEVRLKSMETEFVNEISRQNGVLSAVMVSYNGDYMS
>NC_009012.1|WP_004463800.1|1725726_1726413_-|polyphosphate-polymerase-domain-containing-protein
MEKVKFRHEIKHYINAGDCLLLRRKLRCVMKTDSNAGPDGSYLVRSLYFDTPADKALMEKIDGVDNREKIRIRLYNHDDSFIKLEKKIKVNGLTAKFSANITKEQCKDILNGNIEWMKNSDDPLVVEIYHKMLHQQLKPRTIVDYIREAYVYNPGNVRVTIDKSIRTGLVSNDLFNRELPTVETLPRQLALLEVKYDEFLPEIINDILQIGDRQKLSVSKYALCRMYY
>NC_009012.1|WP_003518298.1|1726588_1727287_+|response-regulator-transcription-factor
MENKKLIYIADDEINICNIIKSFLVKEGYDVETFTDGRSILEAFNKKPADLLVIDIMMPEIDGFSLCSTIRRQSSVPIIIVSAKDTEPDKIAGLTLGSDDYLTKPFSPMELIARIKSIFRRIELDKMHNDSVREIRIGDIVINVDKKQAEFNGKNIGLTGTEFNLLYYLAKNKNRAVSRSELLDKVWGFENYVETRATDDTIKRLRKKLSDSGSSLKIETVWGFGFKVNEEG
>NC_009012.1|WP_003518300.1|1727291_1728761_+|HAMP-domain-containing-histidine-kinase
MKKNTIKWRIFKYNIIAISVLLALTTIVFNITIQSYIKNDIKEQLSTIAQRVEDTALYRGPDFFPPQEPQRPRPLPGRQNGMFRENNDLFRFYFFLDRSLREPLSILNADFILLDNNMDIITPPEGDFFKPSGEIANEIISKIKKLDGSKVQEYVYFNVNNTDYISIVKPVSDKNSFGLGWLIIYSSLQKVNQLKLGINMILIVIVLLSALIFAIFSSLAAKKISAPFSSLNQHIRAIAERNFGVKIEMPVDAELQELVNSINIMSEKLESYDKAQKTFFQNASHEFRTPLMSIQSYAEGIKYDVVDKNTAADIIIDETKRMTHLVEDLLYLSRLDTIEENYRFADLDFKDFINACQERMYGIASKSGINLEVENINEPVVVYADEEKLFRAFANIIGNCIRYANNTVSIVPKIIDRSKIEIVIRDDGPGIDSNELPNIFERFYKGKKGNVGLGLAISKNIIERHNGKITARNSESGAVFTIVLPVKQS
>NC_009012.1|WP_004463804.1|1728802_1729753_-|cation-transporter
MIKLLIRWFIKDYQNVDNKKVREAYGVLSGVTGIICNVFLFIVKITVGLVMNSIAVISDAFNNLSDLGSSLVGILGVKLSNRPPDEEHPHGHGRYEYISSLVVSFIIFGVGLELLRNSFWKIIKPEEVTLSTISILLLVISVAVKLWMFSYNRYIGKIINSGINKATAQDSLNDAIATTAVLAGTLIGRFVSFPLDGIMGLIISALIMYTGFGIAKDSVDLLLGLCPNSELIESINSYFLVGEKIKGTHDLKVHDYGPGRISASIHAEVPEGADIVEIHSIIDEIEQRIKNELGIDIVVHMDPVEEKKEDCCNDDK

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Crispr_ID: NC_009012_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009012_3

2729744-2741081

TypeI-B

Consensus_repeat	Method
GTTTCAATTCCTCATAGGTACGATAAAAAC	CRISPRCasFinder
TTTCAATTCCTCATAGGTACGATAAAAAC	CRT
GTTTTTATCGTACCTATGAGGAATTGAAAT	PILER-CR

168 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6

The CRISPR arrays of NC_009012_3

>merge|NC_009012|3|2729744-2741081|CRISPRCasFinder,CRT,PILER-CR
GTTTTAATTCGTCATAGATGCGATAAAAAGTTTATCAAAGCTTTTGAAAACAGTTGCCTGAAAATTTAGTTTCAATTCCTCATTGGTACGATAAAAACGTATTTGAACGGCACATCCTTCAAATCCGCACCATCGTTTCAATTCCTCATAGGTACGATAAAAACATGAGTATCAATTAAGATTATTACTTGAATTAAAGTGGTTTCAATTCCTCATAGGTACGATAAAAACAGCGAGAATAACAGCCGAAACCCTTGGTTTCCAAAGGTTTCAATTCCTCATAGGTACGATAAAAACGAAGACGACTACGATATAGATTACATTTATTGCGAAGGTTTCAATTCCTCATGGGTACGATAAAAACTTGCGCCTTCTCGCTTTTTGACAATGGACGATCTGCAGTTTCAATTCCTCATAGGTACGATAAAAACAATTGCAAATGCTATACGGTGGCTCAAAAACCAGGGATGTTTCAATTCCTCATAGGTACGATAAAAACATGGGACCCAATAAGGGGAAAATTCGATATATTATTTTGTTTCAATTCCTCATAGGTACGATAAAAACTGACAAAGAAGAAAACGGCATAACGCAATTGAGTTTGTTTCAATTCCTCATAGGTACGATAAAAACAAGGATTGACTTATACAGAAACAACAACAGTTAGATTGTTTCAATTCCTCATAGGTACGATAAAAACACTTAAAGGTACTGTATATTGCAAACAGAATTCCAATAGAGTTTCAATTCCTCATAGGTACGATAAAAACTTACACCTATAGCTGATAGAAAGATTGAGTACATAGGTTTCAATTCCTCATAGGTACGATAAAAACCCATTGCCGTTTCTGTCTTCCCGGCTCCACAGGGCAGTTTCAATTCCTCATAGGTACGATAAAAACGAAAAAGATATCTTATTCAGATATCTCAAATTTAAGGATGTTTCAATTCCTCATAGGTACGATAAAAACGATATATTCAGATACATCCGGAACTATTGTTCTTACTAGTTTCAATTCCTCATAGGTACGATAAAAACCGGAATGAACCAGTTCATAGCTTTGCAGGAAATGATGTTTCAATTCCTCATAGGTACGATAAAAACAGTCGTAAGCGCAAGAGAATTGCATGAGAAGCTCGGTAGTTTCAATTCCTCATAGGTACGATAAAAACGCCCAATTCCCGGATGATGACAACAACATGATCCGGAACATGTTTCAATTCCTCATAGGTACGATAAAAACGCATCAGATACTTCTGCAGATATAGCACCCAAGCCCTGTTTCAATTCCTCATAGGTACGATAAAAACTAGCGGCTTATCAATATTAGAATTGGGTTTACAATACGGGTTTCAATTCCTCATAGGTACGATAAAAACGCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAAGTTTCAATTCCTCATAGGTACGATAAAAACTTCCTAAGTTTATCGAGACTTTTATTATTTACATCATGTTTCAATTCCTCATAGGTACGATAAAAACAGACAGATCCTGGCGTCTCCCAGGCAACACGGAAGAGTTTCAATTCCTCATAGGTACGATAAAAACGCATATCTGACCTTCAAGTTCAGATTTTCGCCTGAATCTGTTTCAATTCCTCATAGGTACGATAAAAACATTCGTTTATCTTTATCAAATCACTCCCTCCCTTCAGGTTTCAATTCCTCATAGGTACGATAAAAACGCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAAGTTTCAATTCCTCATAGGTACGATAAAAACTGTAAACCTATTCGTCAACCAAAGTTAACAATTAAGTGTTTCAATTCCTCATAGGTACGATAAAAACTCTTTCATTGTCGGATATTACGACAGCGAAAAAGAAGGTTTCAATTCCTCATAGGTACGATAAAAACCACGATATCGTAGCCTTGGAATCCCAATTTTGAACAAGTTTCAATTCCTCATAGGTACGATAAAAACGATGCATTTTTATTCGCTAAGAGATTCTCAGTGGATGTGTTTCAATTCCTCATAGGTACGATAAAAACAACAAATTTGCTTGGTGATATGGCAAGCGGTGCCGAGGTTTCAATTCCTCATAGGTACGATAAAAACGTGTCGCAAAGAAACTCGCCAATGGTAACTATATTTTTGTGTTTCAATTCCTCATAGGTACGATAAAAACTTTCTTTAAGCATTGCTCTTTCATTCAAAGGAATACAACGTTTCAATTCCTCATAGGTACGATAAAAACAGGAACTTGAATGGGAGATATGAAGGTGAAAGGATTATGTTTCAATTCCTCATAGGTACGATAAAAACTTTAAGAATGTATTTTATATACTCATCCTCAGCCTGGTTTCAATTCCTCATAGGTACGATAAAAACAACAATGATGACGTACCTGCCATCCTTCAGCTTGGGTTTCAATTCCTCATAGGTACGATAAAAACATAGCAATAGGTGGGCTTCAAAACACCTCGTCAGCAGGTTTCAATTCCTCATAGGTACGATAAAAACTGGAGAAGTAGAATTTGAAAGAGTAGTTACGGTTGAGTAGTTTCAATTCCTCATAGGTACGATAAAAACTAGAAAAGCTACTCGGTAAATCAAAATTTGCAGAATTGTGTTTCAATTCCTCATAGGTACGATAAAAACAGAATGAACAGGATTTTCTAACGATTACGCTTCCAAGGTTTCAATTCCTCATAGGTACGATAAAAACTATACTGGTCCAGTGAATGGTCCAGTGAATTTGAAACGTTTCAATTCCTCATAGGTACGATAAAAACCGGAGAATATGTAGAATTAGGGAGGGGTTAGATGGAAGAGTTTCAATTCCTCATAGGTACGATAAAAACGAAAGAAAAAGCGATACTTTTGATGCACTTGATGAAGGTTTCAATTCCTCATAGGTACGATAAAAACTAACTGATGGAATCTATTACAAAAGAAAAAAGTTCAGTTTCAATTCCTCATAGGTACGATAAAAACATTTGCAACAAGGTGGAAATCACATCATATGGTTCGGCCTGTTTCAATTCCTCATAGGTACGATAAAAACCACGCTACTGCTTGACGTACTCCCACTCTCTCTGCTTGTGGTTTCAATTCCTCATAGGTACGATAAAAACGCAGAAAAAACAAACCAAGGCAATGCACTCACTATGTGTTTCAATTCCTCATAGGTACGATAAAAACGAAAAAAGAGAATTTGATGGAAACGTGTTTTATTTGTTTCAATTCCTCATAGGTACGATAAAAACTGGGCGGAGACCCACAGCTTGCTGGGAGCATCACGAATAGTTTCAATTCCTCATAGGTACGATAAAAACAAGATTTAGGCATTATTGATATATTCGGTAGCCTTGGTTTCAATTCCTCATAGGTACGATAAAAACGATTTAACAATACCAAACAATTTACCAAACTGTTCTTGAGGTTTCAATTCCTCATAGGTACGATAAAAACCTTCAAGAAGCCAGAGAGCGAGCCTTGGCAGAATTGTTTCAATTCCTCATAGGTACGATAAAAACTCTTTGATTACATACGTTTTGTCTGGCGCGACATCAGTTTCAATTCCTCATAGGTACGATAAAAACGGAGGGTGGTGCTCCCCTCAGGGAGCCTTCCACCTATTTCAATTCCTCATAGGTACGATAAAAACGCCGCAAGGGGCGAAAGTAAAACCTCTTACACCTGAATTTCAATTCCTCATAGGTACGATAAAAACGTGATGGTGGATGTTTACCGAAAAAGAGATTGAGGAATTTCAATTCCTCATAGGTACGATAAAAACATTAAGGGCGGAATAAACGGAACAATTGAATTATTTAAATTTCAATTCCTCATAGGTACGATAAAAACTTGGCACTTTAAAAAAATAAACAGTAACATTGAATTATATTTCAATTCCTCATAGGTACGATAAAAACGGCGATTACAAATACCGCCGGTATTGAAAGGAGGTATTGATTTCAATTCCTCATAGGTACGATAAAAACATATTCAACAGGATAAAAGAAGAAATAGAATATTATTAATTTCAATTCCTCATAGGTACGATAAAAACTATTGTCGGGAAAGCAAATTGGACCGCAGGAACCGCGGATTTCAATTCCTCATAGGTACGATAAAAACGCTGCAGAAATATATCAAATCACAAAAGAGCCAATCGAATTTCAATTCCTCATAGGTACGATAAAAACAAAACTGAAATATGCAACAGCCAATGACAATACCTTATTTCAATTCCTCATAGGTACGATAAAAACGCAACTTGCGTCCAGCAGATACCATAGAGTATATTTATTTCAATTCCTCATAGGTACGATAAAAACTCCTTCTCCATCTTTGACAGTGTAATTTTCATTGTCAAATTTCAATTCCTCATAGGTACGATAAAAACATTACTCTTAAATATATATTAACATATTTTTATTACAATTTCAATTCCTCATAGGTACGATAAAAACATGGCTATTTTGAGTGGTTTGACCCCTCTTCTTGGCTATTTCAATTCCTCATAGGTACGATAAAAACTGAAAATCTAGGATATAGTATTGGTCAATGGTTCGGATTTCAATTCCTCATAGGTACGATAAAAACTATATGTTCCTTCTACGGCTAGGTACTATGAATTGGATTTCAATTCCTCATAGGTACGATAAAAACGCGCATCGTTCTTGTATTCAGGCAGTGGTCTTGAATGATATTTCAATTCCTCATAGGTACGATAAAAACTGGTACCCGTGTTTTTGTTGTCTATAATAAGACTTATTTCAATTCCTCATAGGTACGATAAAAACCAACAATATATTTGGCAGCCGATGAACCAGAATAATTCTCATTTCAATTCCTCATAGGTACGATAAAAACGGAACATGCTATACCTGAATTAGACGCATTCAGATACAGATTTCAATTCCTCATAGGTACGATAAAAACGGAATACTTTGCCATTATAGCTTTGTTCTGTGCCAATTTCAATTCCTCATAGGTACGATAAAAACGAGTTCTGATATTGGATTTGGAACACTTGATATAGTATTTCAATTCCTCATAGGTACGATAAAAACCCAAAAGTTCGGCAGCTCTGATTCTCTCTTTTGCGGAATTTCAATTCCTCATAGGTACGATAAAAACTTAGCGAAGCCTTTGGAGAATCGAATGTTGAATCTAATTTCAATTCCTCATAGGTACGATAAAAACTACTGCCAAAATCAGGGCTTGCATATTCTCCAAAGGATTTCAATTCCTCATAGGTACGATAAAAACATAAGAATGACAAACAAAACTAGTTCAGTTGTTGGCCTATTTCAATTCCTCATAGGTACGATAAAAACTTGCCTGAATACAAGAACGATGCGCCGGAAGAACTAAAATTTCAATTCCTCATAGGTACGATAAAAACCAGATGAAAGTAGCATAGCTTCAGTTTTTTGCTTTGATTTCAATTCCTCATAGGTACGATAAAAACAAAAGAAATTGCAGATAGGGATGCACAGCTTGAGGAACATTTCAATTCCTCATAGGTACGATAAAAACCAACTCAAAAAATGCGTCTATTTCCTTTTTCCAACAATCATTTCAATTCCTCATAGGTACGATAAAAACTGACCTATAGAACTTGGTGATACATACAGTTCACCGTATTTCAATTCCTCATAGGTACGATAAAAACTGAACCTTTCACTTTATTTGGCTGTGTTACTTTTGTATTTCAATTCCTCATAGGTACGATAAAAACCAGGTTCAGGTTCCTAATAAGAGGGGCATAACAGCCCCTATTTCAATTCCTCATAGGTACGATAAAAACTTGAGATTCTCGCTCCAACGTTCTTCAAACCGTTTGATTTCAATTCCTCATAGGTACGATAAAAACAATATATTGCAGTCCATTGTCTTGTTGTTTATCTCTATTTCAATTCCTCATAGGTACGATAAAAACTAGAGAAGGATTATCATTATTTTCTTCTTTAGCAACATTTCAATTCCTCATAGGTACGATAAAAACCATACAGCCGTACAGGCGATTTGAGGTTCGTGCTCTTGCATTTCAATTCCTCATAGGTACGATAAAAACGTGTAGACCATACTCGCGAAACTCTAGCGGGTCCATATTAATTTCAATTCCTCATAGGTACGATAAAAACGCACCTTTTATCATATCCAAAATAATTTCCACTATCAAAATTTCAATTCCTCATAGGTACGATAAAAACAAAAGCAAATTTCTCGTCTAAAGCTTCCTTTATATCATATTTCAATTCCTCATAGGTACGATAAAAACGTTTTCAATTGGTTGCGTAAGAAACCCCAAGCTATCCGATTTCAATTCCTCATAGGTACGATAAAAACTGAAAGCGAAGCCCTTCCTAAAGGCTATAAAACTAAATTTCAATTCCTCATAGGTACGATAAAAACGCATATGCCAGTTTATACAATCTGAATGTTTCTCTGGTAATTTCAATTCCTCATAGGTACGATAAAAACAATCTGCGAACAAGTTAGCGGAAATCATCTAACAAGATTTCAATTCCTCATAGGTACGATAAAAACAGACAAGATTGATTTGCGAGAAGGTGGCTGCCGATGGCATTTCAATTCCTCATAGGTACGATAAAAACTCTTCCTTCCGATGTTTACGATTATTGGGTAATTATCAGATTTCAATTCCTCATAGGTACGATAAAAACCGATTGGGAAGATTTTGAAAGTCCGTATGAAGAGATGAAATATTTCAATTCCTCATAGGTACGATAAAAACTTCGGACTCCAAAAATCAACATTTTCGATTGTTAAGTATTTCAATTCCTCATAGGTACGATAAAAACTGCATCTTCTGTTTGGAACAACTTAGGCTTTCCTGCATTTCAATTCCTCATAGGTACGATAAAAACACACCCTGCAATATATCCAATTACTTGGCGCATAGATTTCAATTCCTCATAGGTACGATAAAAACGTGATATATTTCACACAGCGAAAGTTTGGAGTGAAAGATCATTTCAATTCCTCATAGGTACGATAAAAACTGCAACAAGCATTGATACGTCAAAGTCAAAACAAGGATTTCAATTCCTCATAGGTACGATAAAAACTAACGATTCCGGAGAGTTGCATGGACTATCAACAAAATTTCAATTCCTCATAGGTACGATAAAAACAAGAAAATGAACGGTGGTTTGACAGAGATGAAATGTAATTTCAATTCCTCATAGGTACGATAAAAACTATAGGTGGACTTGTCGGTTATGTAAGAGACGGTGGTAATTTCAATTCCTCATAGGTACGATAAAAACGACTGATGAAGAAAAAGCCTTGGAGGTTGCAAGGATATTTCAATTCCTCATAGGTACGATAAAAACAGCATTTATACCGTCTGAGGGTTACTTTGAAGGGTTCCTATTTCAATTCCTCATAGGTACGATAAAAACAACCATGACACACAAAGTGAAATTCACGCACAGCGAATTTCAATTCCTCATAGGTACGATAAAAACACGCCTGAAGAAGGAGCAGGCTGAAATCTACAAATTTCAATTCCTCATAGGTACGATAAAAACTTTGTAATGCCAATAAGATTTTTCTTGTACCGAATGATTTCAATTCCTCATAGGTACGATAAAAACTGATGAAGGACGCTGAAACAGGAATGTTCCAGGCTGATTTCAATTCCTCATAGGTACGATAAAAACTTTGTCGCGAATGCTGATCGTGCAGAATAGGTTCCCGTATTTCAATTCCTCATAGGTACGATAAAAACCCAGCATTCCGCCGACTATGGTGATCACTGGCAATAATTTCAATTCCTCATAGGTACGATAAAAACTGATTCTTCTGGGTGAAGACTACATCGTGATCGAACGATTTCAATTCCTCATAGGTACGATAAAAACCATCTATCCATTGGGATATTACTTCATCAAGTGCATATTTCAATTCCTCATAGGTACGATAAAAACGGACGACAAGGTCCAACTCATAGAAGCGCGATTCGGTAATTTCAATTCCTCATAGGTACGATAAAAACAAAAAGAATATGCTATGCTTCCTGAATCAACGAAGCAATATTTCAATTCCTCATAGGTACGATAAAAACAAAATTTCCCACAATAGCTTTTTGTTAGCCTTATCTTATTTCAATTCCTCATAGGTACGATAAAAACCACACAAAAAACGGTTCCGTCATATTCATCTGTCTGTCATTTCAATTCCTCATAGGTACGATAAAAACCCGACTTAAACAAATTACTGGAATAGCAGAATTATTATTTCAATTCCTCATAGGTACGATAAAAACTCGGTGCTGATGGATTACCGACTATTCGACGTGGACGATTTCAATTCCTCATAGGTACGATAAAAACCAAACCATTCTGCTACGGTCAATTTACTATTTGTTATTTGATTTCAATTCCTCATAGGTACGATAAAAACGTGGGTCTGGCTTATTATCAATTGGCAAGTTGTTTTCAATTTCAATTCCTCATAGGTACGATAAAAACTTTACTTTTTCCTGTAGCTCCTTTGGAGACTTGGCGATTTCAATTCCTCATAGGTACGATAAAAACTTTTAGATAGTATATAGCTTTATTTGACAAAGGAACAATTTCAATTCCTCATAGGTACGATAAAAACCAATGGCCCGGAGCAGTTCGCATGCTTAGTTGACAAATTTCAATTCCTCATAGGTACGATAAAAACATTACCTCCCCTGTTTTTTTACATCTGACTCACCTATATTTCAATTCCTCATAGGTACGATAAAAACGCTAGAGAAGTAAAACCAAAGAAGCTAGGTCAAAATGATTTCAATTCCTCATAGGTACGATAAAAACGCTCTGATGGGTCTCCTCTATACCAAATTCTATTTCTATTTCAATTCCTCATAGGTACGATAAAAACGAATGGCAAAGCAAACTTAAAGAACTTCAAAAAGAAATTTCAATTCCTCATAGGTACGATAAAAACCTTAAAATTCAAAAGTACAAATCTCTACGCAATCCAGATTTCAATTCCTCATAGGTACGATAAAAACGTGGATTCAATCGGTGAACAAATAGCATTGAAAAACAATTTCAATTCCTCATAGGTACGATAAAAACTCGATAGGGTGGGTTCACACCTTCTACTACTTCTTGCCATTTCAATTCCTCATAGGTACGATAAAAACGGTTTTGGGCAGCAGTACCTTCTACAGACTCAAGTAATTTCAATTCCTCATAGGTACGATAAAAACACGAAGCAGGTTTATACAGTTTGATATTGAAATCAAATTTCAATTCCTCATAGGTACGATAAAAACTTCCTAACTGTATCACTGGACGATTACACAAAGGTTTCAATTTCAATTCCTCATAGGTACGATAAAAACTTCGTTTTCAAGCTTGTCCATCTGCGTAATAATTTTGGAATTTCAATTCCTCATAGGTACGATAAAAACGCTGTTCTATTTCTGTTCTTATAGCATCTGCGTGAGCCTTATTTCAATTCCTCATAGGTACGATAAAAACTTTCGTACGACGGAAGAATTTCCAGCGAATTCAGAAAATTTCAATTCCTCATAGGTACGATAAAAACGAAGCAGCAAGAAGGGCTGGTTATAGCGAGAAAACAGCATTTCAATTCCTCATAGGTACGATAAAAACACGTAAGATTCATAGCGGATTACCAGCTCAAATAGTAGAATTTCAATTCCTCATAGGTACGATAAAAACGGACGCTGGCCTGACTACACTTGTGATTTTTATGGATTTCAATTCCTCATAGGTACGATAAAAACAGCTAATTTCTACCGTTTCCGGTACAGGAATTATGCATTTCAATTCCTCATAGGTACGATAAAAACGAAATTGTATATGATTATGTAGCAGAACATTGCAAAAATTTCAATTCCTCATAGGTACGATAAAAACGGTTTGGTGATATTTTAGCCAGTATTGAAAGTTTGGGATTTCAATTCCTCATAGGTACGATAAAAACCTGGTTCTAGTGTTACATTCGTTACGAAGCAAGAGGTATTTCAATTCCTCATAGGTACGATAAAAACAAGAAGGTCAAAAAATATGGGATGAGACAGCAGAAGAATTTCAATTCCTCATAGGTACGATAAAAACCCATTAGATAGAGAATTGAAAAATTGCCTGCAAATGTAGATTTCAATTCCTCATAGGTACGATAAAAACTCTGAAGACAAAATCCGGAGGAGCAAACAACGATCCATTTCAATTCCTCATAGGTACGATAAAAACCCTAAAGAGGTGGGAGTCTTCTTGCTATTTTCTTAGTATTTCAATTCCTCATAGGTACGATAAAAACGCTAATGGGCGAAGGAGAGCGAAGAAAAGAATGGGGCAATTTCAATTCCTCATAGGTACGATAAAAACTTCGTACGACGGACAAATTTCCAGCGAATTCAGAAAATTTCAATTCCTCATAGGTACGATAAAAACTGGCGACGCTTACGAAAGAGCAAAAAGAGAAGCTGAGATATTTCAATTCCTCATAGGTACGATAAAAACTGTATTAGCATAACTCTCTATAAATGCTTCGTAATATTTCAATTCCTCATAGGTACGATAAAAACATCGAAAGCAACTTCTTTTCTTGCTCAGCCAATATATATTTCAATTCCTCATAGGTACGATAAAAACAATAGCACGAAGAGGAACATAAGTTGTGCCGTTATAGTTATTTCAATTCCTCATAGGTACGATAAAAACCAAATATGCTGGGATTCCCAGTGCCAATGAACCGAAATTTCAATTCCTCATAGGTACGATAAAAACGAAGCAATAGACTTGTATGCAAAATATGGGATTGTGCAATTTCAATTCCTCATAGGTACGATAAAAACGCAAACGCAGGGATTCCGCCAAATACCAATGCCCCAAATTTCAATTCCTCATAGGTACGATAAAAACGGGTCCGGCTTATTATCAACCGGTAGATTGTTTTCGATTTCAATTCCTCATAGGTACGATAAAAACCTTATCTTTCACAACTTCCTCCGGCCAAAAGGCTTCCTATTTCAATTCCTCATAGGTACGATAAAAACGACAGCAGTAGAACTTGCAAAAACGAAGCTGCAAAATTTCAATTCCTCATAGGTACGATAAAAACTCAACAGCAAATTCAAGCTTGCACGCTTCAAACTCTTATTTCAATTCCTCATAGGTACGATAAAAACTAGAGTGGTCTAACTTTTTTTCTTTCAGCGGCTTGAAATTTCAATTCCTCATAGGTACGATAAAAACGGAAGACAAACTTGATGCTGCCAGCGCCAATGCATGATGATTTCAATTCCTCATAGGTACGATAAAAAC

>NC_009012|3|3|2729744-2741081|CRISPRCasFinder
GTTTTAATTCGTCATAGATGCGATAAAAAG	TTTATCAAAGCTTTTGAAAACAGTTGCCTGAAAATTTA
GTTTCAATTCCTCATTGGTACGATAAAAAC	GTATTTGAACGGCACATCCTTCAAATCCGCACCATC
GTTTCAATTCCTCATAGGTACGATAAAAAC	ATGAGTATCAATTAAGATTATTACTTGAATTAAAGTG
GTTTCAATTCCTCATAGGTACGATAAAAAC	AGCGAGAATAACAGCCGAAACCCTTGGTTTCCAAAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GAAGACGACTACGATATAGATTACATTTATTGCGAAG
GTTTCAATTCCTCATGGGTACGATAAAAAC	TTGCGCCTTCTCGCTTTTTGACAATGGACGATCTGCA
GTTTCAATTCCTCATAGGTACGATAAAAAC	AATTGCAAATGCTATACGGTGGCTCAAAAACCAGGGAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	ATGGGACCCAATAAGGGGAAAATTCGATATATTATTTT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TGACAAAGAAGAAAACGGCATAACGCAATTGAGTTT
GTTTCAATTCCTCATAGGTACGATAAAAAC	AAGGATTGACTTATACAGAAACAACAACAGTTAGATT
GTTTCAATTCCTCATAGGTACGATAAAAAC	ACTTAAAGGTACTGTATATTGCAAACAGAATTCCAATAGA
GTTTCAATTCCTCATAGGTACGATAAAAAC	TTACACCTATAGCTGATAGAAAGATTGAGTACATAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	CCATTGCCGTTTCTGTCTTCCCGGCTCCACAGGGCA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GAAAAAGATATCTTATTCAGATATCTCAAATTTAAGGAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	GATATATTCAGATACATCCGGAACTATTGTTCTTACTA
GTTTCAATTCCTCATAGGTACGATAAAAAC	CGGAATGAACCAGTTCATAGCTTTGCAGGAAATGAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	AGTCGTAAGCGCAAGAGAATTGCATGAGAAGCTCGGTA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCCCAATTCCCGGATGATGACAACAACATGATCCGGAACAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCATCAGATACTTCTGCAGATATAGCACCCAAGCCCT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TAGCGGCTTATCAATATTAGAATTGGGTTTACAATACGG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAA
GTTTCAATTCCTCATAGGTACGATAAAAAC	TTCCTAAGTTTATCGAGACTTTTATTATTTACATCAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	AGACAGATCCTGGCGTCTCCCAGGCAACACGGAAGA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCATATCTGACCTTCAAGTTCAGATTTTCGCCTGAATCT
GTTTCAATTCCTCATAGGTACGATAAAAAC	ATTCGTTTATCTTTATCAAATCACTCCCTCCCTTCAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAA
GTTTCAATTCCTCATAGGTACGATAAAAAC	TGTAAACCTATTCGTCAACCAAAGTTAACAATTAAGT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TCTTTCATTGTCGGATATTACGACAGCGAAAAAGAAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	CACGATATCGTAGCCTTGGAATCCCAATTTTGAACAA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GATGCATTTTTATTCGCTAAGAGATTCTCAGTGGATGT
GTTTCAATTCCTCATAGGTACGATAAAAAC	AACAAATTTGCTTGGTGATATGGCAAGCGGTGCCGAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GTGTCGCAAAGAAACTCGCCAATGGTAACTATATTTTTGT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TTTCTTTAAGCATTGCTCTTTCATTCAAAGGAATACAAC
GTTTCAATTCCTCATAGGTACGATAAAAAC	AGGAACTTGAATGGGAGATATGAAGGTGAAAGGATTAT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TTTAAGAATGTATTTTATATACTCATCCTCAGCCTG
GTTTCAATTCCTCATAGGTACGATAAAAAC	AACAATGATGACGTACCTGCCATCCTTCAGCTTGG
GTTTCAATTCCTCATAGGTACGATAAAAAC	ATAGCAATAGGTGGGCTTCAAAACACCTCGTCAGCAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	TGGAGAAGTAGAATTTGAAAGAGTAGTTACGGTTGAGTA
GTTTCAATTCCTCATAGGTACGATAAAAAC	TAGAAAAGCTACTCGGTAAATCAAAATTTGCAGAATTGT
GTTTCAATTCCTCATAGGTACGATAAAAAC	AGAATGAACAGGATTTTCTAACGATTACGCTTCCAAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	TATACTGGTCCAGTGAATGGTCCAGTGAATTTGAAAC
GTTTCAATTCCTCATAGGTACGATAAAAAC	CGGAGAATATGTAGAATTAGGGAGGGGTTAGATGGAAGA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GAAAGAAAAAGCGATACTTTTGATGCACTTGATGAAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	TAACTGATGGAATCTATTACAAAAGAAAAAAGTTCA
GTTTCAATTCCTCATAGGTACGATAAAAAC	ATTTGCAACAAGGTGGAAATCACATCATATGGTTCGGCCT
GTTTCAATTCCTCATAGGTACGATAAAAAC	CACGCTACTGCTTGACGTACTCCCACTCTCTCTGCTTGTG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GCAGAAAAAACAAACCAAGGCAATGCACTCACTATGT
GTTTCAATTCCTCATAGGTACGATAAAAAC	GAAAAAAGAGAATTTGATGGAAACGTGTTTTATTT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TGGGCGGAGACCCACAGCTTGCTGGGAGCATCACGAATA
GTTTCAATTCCTCATAGGTACGATAAAAAC	AAGATTTAGGCATTATTGATATATTCGGTAGCCTTG
GTTTCAATTCCTCATAGGTACGATAAAAAC	GATTTAACAATACCAAACAATTTACCAAACTGTTCTTGAG
GTTTCAATTCCTCATAGGTACGATAAAAAC	CTTCAAGAAGCCAGAGAGCGAGCCTTGGCAGAATT
GTTTCAATTCCTCATAGGTACGATAAAAAC	TCTTTGATTACATACGTTTTGTCTGGCGCGACATCA
GTTTCAATTCCTCATAGGTACGATAAAAAC	GGAGGGTGGTGCTCCCCTCAGGGAGCCTTCCACCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCCGCAAGGGGCGAAAGTAAAACCTCTTACACCTGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTGATGGTGGATGTTTACCGAAAAAGAGATTGAGGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATTAAGGGCGGAATAAACGGAACAATTGAATTATTTAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTGGCACTTTAAAAAAATAAACAGTAACATTGAATTAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGCGATTACAAATACCGCCGGTATTGAAAGGAGGTATTG
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATATTCAACAGGATAAAAGAAGAAATAGAATATTATTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TATTGTCGGGAAAGCAAATTGGACCGCAGGAACCGCGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCTGCAGAAATATATCAAATCACAAAAGAGCCAATCGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAAACTGAAATATGCAACAGCCAATGACAATACCTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCAACTTGCGTCCAGCAGATACCATAGAGTATATTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCCTTCTCCATCTTTGACAGTGTAATTTTCATTGTCAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATTACTCTTAAATATATATTAACATATTTTTATTACA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATGGCTATTTTGAGTGGTTTGACCCCTCTTCTTGGCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGAAAATCTAGGATATAGTATTGGTCAATGGTTCGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TATATGTTCCTTCTACGGCTAGGTACTATGAATTGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCGCATCGTTCTTGTATTCAGGCAGTGGTCTTGAATGAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGGTACCCGTGTTTTTGTTGTCTATAATAAGACTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAACAATATATTTGGCAGCCGATGAACCAGAATAATTCTC
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGAACATGCTATACCTGAATTAGACGCATTCAGATACAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGAATACTTTGCCATTATAGCTTTGTTCTGTGCCA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GAGTTCTGATATTGGATTTGGAACACTTGATATAGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CCAAAAGTTCGGCAGCTCTGATTCTCTCTTTTGCGGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTAGCGAAGCCTTTGGAGAATCGAATGTTGAATCTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TACTGCCAAAATCAGGGCTTGCATATTCTCCAAAGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATAAGAATGACAAACAAAACTAGTTCAGTTGTTGGCCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTGCCTGAATACAAGAACGATGCGCCGGAAGAACTAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAGATGAAAGTAGCATAGCTTCAGTTTTTTGCTTTG
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAAAGAAATTGCAGATAGGGATGCACAGCTTGAGGAAC
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAACTCAAAAAATGCGTCTATTTCCTTTTTCCAACAATC
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGACCTATAGAACTTGGTGATACATACAGTTCACCGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGAACCTTTCACTTTATTTGGCTGTGTTACTTTTGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAGGTTCAGGTTCCTAATAAGAGGGGCATAACAGCCCCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTGAGATTCTCGCTCCAACGTTCTTCAAACCGTTTG
ATTTCAATTCCTCATAGGTACGATAAAAAC	AATATATTGCAGTCCATTGTCTTGTTGTTTATCTCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TAGAGAAGGATTATCATTATTTTCTTCTTTAGCAAC
ATTTCAATTCCTCATAGGTACGATAAAAAC	CATACAGCCGTACAGGCGATTTGAGGTTCGTGCTCTTGC
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTGTAGACCATACTCGCGAAACTCTAGCGGGTCCATATTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCACCTTTTATCATATCCAAAATAATTTCCACTATCAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAAAGCAAATTTCTCGTCTAAAGCTTCCTTTATATCAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTTTTCAATTGGTTGCGTAAGAAACCCCAAGCTATCCG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGAAAGCGAAGCCCTTCCTAAAGGCTATAAAACTAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCATATGCCAGTTTATACAATCTGAATGTTTCTCTGGTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	AATCTGCGAACAAGTTAGCGGAAATCATCTAACAAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	AGACAAGATTGATTTGCGAGAAGGTGGCTGCCGATGGC
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCTTCCTTCCGATGTTTACGATTATTGGGTAATTATCAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	CGATTGGGAAGATTTTGAAAGTCCGTATGAAGAGATGAAAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTCGGACTCCAAAAATCAACATTTTCGATTGTTAAGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGCATCTTCTGTTTGGAACAACTTAGGCTTTCCTGC
ATTTCAATTCCTCATAGGTACGATAAAAAC	ACACCCTGCAATATATCCAATTACTTGGCGCATAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTGATATATTTCACACAGCGAAAGTTTGGAGTGAAAGATC
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGCAACAAGCATTGATACGTCAAAGTCAAAACAAGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TAACGATTCCGGAGAGTTGCATGGACTATCAACAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAGAAAATGAACGGTGGTTTGACAGAGATGAAATGTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TATAGGTGGACTTGTCGGTTATGTAAGAGACGGTGGTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GACTGATGAAGAAAAAGCCTTGGAGGTTGCAAGGAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	AGCATTTATACCGTCTGAGGGTTACTTTGAAGGGTTCCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	AACCATGACACACAAAGTGAAATTCACGCACAGCGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ACGCCTGAAGAAGGAGCAGGCTGAAATCTACAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTTGTAATGCCAATAAGATTTTTCTTGTACCGAATG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGATGAAGGACGCTGAAACAGGAATGTTCCAGGCTG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTTGTCGCGAATGCTGATCGTGCAGAATAGGTTCCCGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CCAGCATTCCGCCGACTATGGTGATCACTGGCAATA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGATTCTTCTGGGTGAAGACTACATCGTGATCGAACG
ATTTCAATTCCTCATAGGTACGATAAAAAC	CATCTATCCATTGGGATATTACTTCATCAAGTGCAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGACGACAAGGTCCAACTCATAGAAGCGCGATTCGGTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAAAAGAATATGCTATGCTTCCTGAATCAACGAAGCAAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAAATTTCCCACAATAGCTTTTTGTTAGCCTTATCTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CACACAAAAAACGGTTCCGTCATATTCATCTGTCTGTC
ATTTCAATTCCTCATAGGTACGATAAAAAC	CCGACTTAAACAAATTACTGGAATAGCAGAATTATT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCGGTGCTGATGGATTACCGACTATTCGACGTGGACG
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAAACCATTCTGCTACGGTCAATTTACTATTTGTTATTTG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTGGGTCTGGCTTATTATCAATTGGCAAGTTGTTTTCA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTTACTTTTTCCTGTAGCTCCTTTGGAGACTTGGCG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTTTAGATAGTATATAGCTTTATTTGACAAAGGAACA
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAATGGCCCGGAGCAGTTCGCATGCTTAGTTGACAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATTACCTCCCCTGTTTTTTTACATCTGACTCACCTAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCTAGAGAAGTAAAACCAAAGAAGCTAGGTCAAAATG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCTCTGATGGGTCTCCTCTATACCAAATTCTATTTCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GAATGGCAAAGCAAACTTAAAGAACTTCAAAAAGAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	CTTAAAATTCAAAAGTACAAATCTCTACGCAATCCAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	GTGGATTCAATCGGTGAACAAATAGCATTGAAAAACA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCGATAGGGTGGGTTCACACCTTCTACTACTTCTTGCC
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGTTTTGGGCAGCAGTACCTTCTACAGACTCAAGTA
ATTTCAATTCCTCATAGGTACGATAAAAAC	ACGAAGCAGGTTTATACAGTTTGATATTGAAATCAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTCCTAACTGTATCACTGGACGATTACACAAAGGTTTCA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTCGTTTTCAAGCTTGTCCATCTGCGTAATAATTTTGGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTTCTATTTCTGTTCTTATAGCATCTGCGTGAGCCTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTTCGTACGACGGAAGAATTTCCAGCGAATTCAGAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GAAGCAGCAAGAAGGGCTGGTTATAGCGAGAAAACAGC
ATTTCAATTCCTCATAGGTACGATAAAAAC	ACGTAAGATTCATAGCGGATTACCAGCTCAAATAGTAGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGACGCTGGCCTGACTACACTTGTGATTTTTATGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	AGCTAATTTCTACCGTTTCCGGTACAGGAATTATGC
ATTTCAATTCCTCATAGGTACGATAAAAAC	GAAATTGTATATGATTATGTAGCAGAACATTGCAAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGTTTGGTGATATTTTAGCCAGTATTGAAAGTTTGGG
ATTTCAATTCCTCATAGGTACGATAAAAAC	CTGGTTCTAGTGTTACATTCGTTACGAAGCAAGAGGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	AAGAAGGTCAAAAAATATGGGATGAGACAGCAGAAGA
ATTTCAATTCCTCATAGGTACGATAAAAAC	CCATTAGATAGAGAATTGAAAAATTGCCTGCAAATGTAG
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCTGAAGACAAAATCCGGAGGAGCAAACAACGATCC
ATTTCAATTCCTCATAGGTACGATAAAAAC	CCTAAAGAGGTGGGAGTCTTCTTGCTATTTTCTTAGT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCTAATGGGCGAAGGAGAGCGAAGAAAAGAATGGGGCA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TTCGTACGACGGACAAATTTCCAGCGAATTCAGAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGGCGACGCTTACGAAAGAGCAAAAAGAGAAGCTGAGAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TGTATTAGCATAACTCTCTATAAATGCTTCGTAAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	ATCGAAAGCAACTTCTTTTCTTGCTCAGCCAATATAT
ATTTCAATTCCTCATAGGTACGATAAAAAC	AATAGCACGAAGAGGAACATAAGTTGTGCCGTTATAGTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	CAAATATGCTGGGATTCCCAGTGCCAATGAACCGAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GAAGCAATAGACTTGTATGCAAAATATGGGATTGTGCA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GCAAACGCAGGGATTCCGCCAAATACCAATGCCCCAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGGTCCGGCTTATTATCAACCGGTAGATTGTTTTCG
ATTTCAATTCCTCATAGGTACGATAAAAAC	CTTATCTTTCACAACTTCCTCCGGCCAAAAGGCTTCCT
ATTTCAATTCCTCATAGGTACGATAAAAAC	GACAGCAGTAGAACTTGCAAAAACGAAGCTGCAAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	TCAACAGCAAATTCAAGCTTGCACGCTTCAAACTCTT
ATTTCAATTCCTCATAGGTACGATAAAAAC	TAGAGTGGTCTAACTTTTTTTCTTTCAGCGGCTTGAA
ATTTCAATTCCTCATAGGTACGATAAAAAC	GGAAGACAAACTTGATGCTGCCAGCGCCAATGCATGATG
ATTTCAATTCCTCATAGGTACGATAAAAAC

>NC_009012|3|3|2729745-2741081|CRT
TTTTAATTCGTCATAGATGCGATAAAAAG	TTTATCAAAGCTTTTGAAAACAGTTGCCTGAAAATTTAG
TTTCAATTCCTCATTGGTACGATAAAAAC	GTATTTGAACGGCACATCCTTCAAATCCGCACCATCG
TTTCAATTCCTCATAGGTACGATAAAAAC	ATGAGTATCAATTAAGATTATTACTTGAATTAAAGTGG
TTTCAATTCCTCATAGGTACGATAAAAAC	AGCGAGAATAACAGCCGAAACCCTTGGTTTCCAAAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAGACGACTACGATATAGATTACATTTATTGCGAAGG
TTTCAATTCCTCATGGGTACGATAAAAAC	TTGCGCCTTCTCGCTTTTTGACAATGGACGATCTGCAG
TTTCAATTCCTCATAGGTACGATAAAAAC	AATTGCAAATGCTATACGGTGGCTCAAAAACCAGGGATG
TTTCAATTCCTCATAGGTACGATAAAAAC	ATGGGACCCAATAAGGGGAAAATTCGATATATTATTTTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TGACAAAGAAGAAAACGGCATAACGCAATTGAGTTTG
TTTCAATTCCTCATAGGTACGATAAAAAC	AAGGATTGACTTATACAGAAACAACAACAGTTAGATTG
TTTCAATTCCTCATAGGTACGATAAAAAC	ACTTAAAGGTACTGTATATTGCAAACAGAATTCCAATAGAG
TTTCAATTCCTCATAGGTACGATAAAAAC	TTACACCTATAGCTGATAGAAAGATTGAGTACATAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	CCATTGCCGTTTCTGTCTTCCCGGCTCCACAGGGCAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAAAAGATATCTTATTCAGATATCTCAAATTTAAGGATG
TTTCAATTCCTCATAGGTACGATAAAAAC	GATATATTCAGATACATCCGGAACTATTGTTCTTACTAG
TTTCAATTCCTCATAGGTACGATAAAAAC	CGGAATGAACCAGTTCATAGCTTTGCAGGAAATGATG
TTTCAATTCCTCATAGGTACGATAAAAAC	AGTCGTAAGCGCAAGAGAATTGCATGAGAAGCTCGGTAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCCCAATTCCCGGATGATGACAACAACATGATCCGGAACATG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCATCAGATACTTCTGCAGATATAGCACCCAAGCCCTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TAGCGGCTTATCAATATTAGAATTGGGTTTACAATACGGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAAG
TTTCAATTCCTCATAGGTACGATAAAAAC	TTCCTAAGTTTATCGAGACTTTTATTATTTACATCATG
TTTCAATTCCTCATAGGTACGATAAAAAC	AGACAGATCCTGGCGTCTCCCAGGCAACACGGAAGAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCATATCTGACCTTCAAGTTCAGATTTTCGCCTGAATCTG
TTTCAATTCCTCATAGGTACGATAAAAAC	ATTCGTTTATCTTTATCAAATCACTCCCTCCCTTCAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTACATTTTGATTTTAATATAACAGAATTTCTCAAAG
TTTCAATTCCTCATAGGTACGATAAAAAC	TGTAAACCTATTCGTCAACCAAAGTTAACAATTAAGTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TCTTTCATTGTCGGATATTACGACAGCGAAAAAGAAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	CACGATATCGTAGCCTTGGAATCCCAATTTTGAACAAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GATGCATTTTTATTCGCTAAGAGATTCTCAGTGGATGTG
TTTCAATTCCTCATAGGTACGATAAAAAC	AACAAATTTGCTTGGTGATATGGCAAGCGGTGCCGAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGTCGCAAAGAAACTCGCCAATGGTAACTATATTTTTGTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTCTTTAAGCATTGCTCTTTCATTCAAAGGAATACAACG
TTTCAATTCCTCATAGGTACGATAAAAAC	AGGAACTTGAATGGGAGATATGAAGGTGAAAGGATTATG
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTAAGAATGTATTTTATATACTCATCCTCAGCCTGG
TTTCAATTCCTCATAGGTACGATAAAAAC	AACAATGATGACGTACCTGCCATCCTTCAGCTTGGG
TTTCAATTCCTCATAGGTACGATAAAAAC	ATAGCAATAGGTGGGCTTCAAAACACCTCGTCAGCAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	TGGAGAAGTAGAATTTGAAAGAGTAGTTACGGTTGAGTAG
TTTCAATTCCTCATAGGTACGATAAAAAC	TAGAAAAGCTACTCGGTAAATCAAAATTTGCAGAATTGTG
TTTCAATTCCTCATAGGTACGATAAAAAC	AGAATGAACAGGATTTTCTAACGATTACGCTTCCAAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	TATACTGGTCCAGTGAATGGTCCAGTGAATTTGAAACG
TTTCAATTCCTCATAGGTACGATAAAAAC	CGGAGAATATGTAGAATTAGGGAGGGGTTAGATGGAAGAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAAGAAAAAGCGATACTTTTGATGCACTTGATGAAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	TAACTGATGGAATCTATTACAAAAGAAAAAAGTTCAG
TTTCAATTCCTCATAGGTACGATAAAAAC	ATTTGCAACAAGGTGGAAATCACATCATATGGTTCGGCCTG
TTTCAATTCCTCATAGGTACGATAAAAAC	CACGCTACTGCTTGACGTACTCCCACTCTCTCTGCTTGTGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GCAGAAAAAACAAACCAAGGCAATGCACTCACTATGTG
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAAAAAGAGAATTTGATGGAAACGTGTTTTATTTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TGGGCGGAGACCCACAGCTTGCTGGGAGCATCACGAATAG
TTTCAATTCCTCATAGGTACGATAAAAAC	AAGATTTAGGCATTATTGATATATTCGGTAGCCTTGG
TTTCAATTCCTCATAGGTACGATAAAAAC	GATTTAACAATACCAAACAATTTACCAAACTGTTCTTGAGG
TTTCAATTCCTCATAGGTACGATAAAAAC	CTTCAAGAAGCCAGAGAGCGAGCCTTGGCAGAATTG
TTTCAATTCCTCATAGGTACGATAAAAAC	TCTTTGATTACATACGTTTTGTCTGGCGCGACATCAG
TTTCAATTCCTCATAGGTACGATAAAAAC	GGAGGGTGGTGCTCCCCTCAGGGAGCCTTCCACCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCCGCAAGGGGCGAAAGTAAAACCTCTTACACCTGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGATGGTGGATGTTTACCGAAAAAGAGATTGAGGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATTAAGGGCGGAATAAACGGAACAATTGAATTATTTAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTGGCACTTTAAAAAAATAAACAGTAACATTGAATTATA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGCGATTACAAATACCGCCGGTATTGAAAGGAGGTATTGA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATATTCAACAGGATAAAAGAAGAAATAGAATATTATTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TATTGTCGGGAAAGCAAATTGGACCGCAGGAACCGCGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTGCAGAAATATATCAAATCACAAAAGAGCCAATCGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAAACTGAAATATGCAACAGCCAATGACAATACCTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCAACTTGCGTCCAGCAGATACCATAGAGTATATTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCCTTCTCCATCTTTGACAGTGTAATTTTCATTGTCAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATTACTCTTAAATATATATTAACATATTTTTATTACAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATGGCTATTTTGAGTGGTTTGACCCCTCTTCTTGGCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGAAAATCTAGGATATAGTATTGGTCAATGGTTCGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TATATGTTCCTTCTACGGCTAGGTACTATGAATTGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCGCATCGTTCTTGTATTCAGGCAGTGGTCTTGAATGATA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGGTACCCGTGTTTTTGTTGTCTATAATAAGACTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAACAATATATTTGGCAGCCGATGAACCAGAATAATTCTCA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGAACATGCTATACCTGAATTAGACGCATTCAGATACAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGAATACTTTGCCATTATAGCTTTGTTCTGTGCCAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GAGTTCTGATATTGGATTTGGAACACTTGATATAGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CCAAAAGTTCGGCAGCTCTGATTCTCTCTTTTGCGGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTAGCGAAGCCTTTGGAGAATCGAATGTTGAATCTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TACTGCCAAAATCAGGGCTTGCATATTCTCCAAAGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATAAGAATGACAAACAAAACTAGTTCAGTTGTTGGCCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTGCCTGAATACAAGAACGATGCGCCGGAAGAACTAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAGATGAAAGTAGCATAGCTTCAGTTTTTTGCTTTGA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAAAGAAATTGCAGATAGGGATGCACAGCTTGAGGAACA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAACTCAAAAAATGCGTCTATTTCCTTTTTCCAACAATCA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGACCTATAGAACTTGGTGATACATACAGTTCACCGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGAACCTTTCACTTTATTTGGCTGTGTTACTTTTGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAGGTTCAGGTTCCTAATAAGAGGGGCATAACAGCCCCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTGAGATTCTCGCTCCAACGTTCTTCAAACCGTTTGA
TTTCAATTCCTCATAGGTACGATAAAAAC	AATATATTGCAGTCCATTGTCTTGTTGTTTATCTCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TAGAGAAGGATTATCATTATTTTCTTCTTTAGCAACA
TTTCAATTCCTCATAGGTACGATAAAAAC	CATACAGCCGTACAGGCGATTTGAGGTTCGTGCTCTTGCA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGTAGACCATACTCGCGAAACTCTAGCGGGTCCATATTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCACCTTTTATCATATCCAAAATAATTTCCACTATCAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAAAGCAAATTTCTCGTCTAAAGCTTCCTTTATATCATA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTTTTCAATTGGTTGCGTAAGAAACCCCAAGCTATCCGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGAAAGCGAAGCCCTTCCTAAAGGCTATAAAACTAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCATATGCCAGTTTATACAATCTGAATGTTTCTCTGGTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	AATCTGCGAACAAGTTAGCGGAAATCATCTAACAAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	AGACAAGATTGATTTGCGAGAAGGTGGCTGCCGATGGCA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCTTCCTTCCGATGTTTACGATTATTGGGTAATTATCAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	CGATTGGGAAGATTTTGAAAGTCCGTATGAAGAGATGAAATA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTCGGACTCCAAAAATCAACATTTTCGATTGTTAAGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGCATCTTCTGTTTGGAACAACTTAGGCTTTCCTGCA
TTTCAATTCCTCATAGGTACGATAAAAAC	ACACCCTGCAATATATCCAATTACTTGGCGCATAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGATATATTTCACACAGCGAAAGTTTGGAGTGAAAGATCA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGCAACAAGCATTGATACGTCAAAGTCAAAACAAGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TAACGATTCCGGAGAGTTGCATGGACTATCAACAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAGAAAATGAACGGTGGTTTGACAGAGATGAAATGTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TATAGGTGGACTTGTCGGTTATGTAAGAGACGGTGGTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GACTGATGAAGAAAAAGCCTTGGAGGTTGCAAGGATA
TTTCAATTCCTCATAGGTACGATAAAAAC	AGCATTTATACCGTCTGAGGGTTACTTTGAAGGGTTCCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	AACCATGACACACAAAGTGAAATTCACGCACAGCGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ACGCCTGAAGAAGGAGCAGGCTGAAATCTACAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTGTAATGCCAATAAGATTTTTCTTGTACCGAATGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGATGAAGGACGCTGAAACAGGAATGTTCCAGGCTGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTGTCGCGAATGCTGATCGTGCAGAATAGGTTCCCGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CCAGCATTCCGCCGACTATGGTGATCACTGGCAATAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGATTCTTCTGGGTGAAGACTACATCGTGATCGAACGA
TTTCAATTCCTCATAGGTACGATAAAAAC	CATCTATCCATTGGGATATTACTTCATCAAGTGCATA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGACGACAAGGTCCAACTCATAGAAGCGCGATTCGGTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAAAAGAATATGCTATGCTTCCTGAATCAACGAAGCAATA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAAATTTCCCACAATAGCTTTTTGTTAGCCTTATCTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CACACAAAAAACGGTTCCGTCATATTCATCTGTCTGTCA
TTTCAATTCCTCATAGGTACGATAAAAAC	CCGACTTAAACAAATTACTGGAATAGCAGAATTATTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCGGTGCTGATGGATTACCGACTATTCGACGTGGACGA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAAACCATTCTGCTACGGTCAATTTACTATTTGTTATTTGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGGGTCTGGCTTATTATCAATTGGCAAGTTGTTTTCAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTACTTTTTCCTGTAGCTCCTTTGGAGACTTGGCGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTTAGATAGTATATAGCTTTATTTGACAAAGGAACAA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAATGGCCCGGAGCAGTTCGCATGCTTAGTTGACAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATTACCTCCCCTGTTTTTTTACATCTGACTCACCTATA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTAGAGAAGTAAAACCAAAGAAGCTAGGTCAAAATGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTCTGATGGGTCTCCTCTATACCAAATTCTATTTCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	GAATGGCAAAGCAAACTTAAAGAACTTCAAAAAGAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	CTTAAAATTCAAAAGTACAAATCTCTACGCAATCCAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	GTGGATTCAATCGGTGAACAAATAGCATTGAAAAACAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCGATAGGGTGGGTTCACACCTTCTACTACTTCTTGCCA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGTTTTGGGCAGCAGTACCTTCTACAGACTCAAGTAA
TTTCAATTCCTCATAGGTACGATAAAAAC	ACGAAGCAGGTTTATACAGTTTGATATTGAAATCAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTCCTAACTGTATCACTGGACGATTACACAAAGGTTTCAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTCGTTTTCAAGCTTGTCCATCTGCGTAATAATTTTGGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTGTTCTATTTCTGTTCTTATAGCATCTGCGTGAGCCTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTTCGTACGACGGAAGAATTTCCAGCGAATTCAGAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAGCAGCAAGAAGGGCTGGTTATAGCGAGAAAACAGCA
TTTCAATTCCTCATAGGTACGATAAAAAC	ACGTAAGATTCATAGCGGATTACCAGCTCAAATAGTAGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGACGCTGGCCTGACTACACTTGTGATTTTTATGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	AGCTAATTTCTACCGTTTCCGGTACAGGAATTATGCA
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAATTGTATATGATTATGTAGCAGAACATTGCAAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGTTTGGTGATATTTTAGCCAGTATTGAAAGTTTGGGA
TTTCAATTCCTCATAGGTACGATAAAAAC	CTGGTTCTAGTGTTACATTCGTTACGAAGCAAGAGGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	AAGAAGGTCAAAAAATATGGGATGAGACAGCAGAAGAA
TTTCAATTCCTCATAGGTACGATAAAAAC	CCATTAGATAGAGAATTGAAAAATTGCCTGCAAATGTAGA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCTGAAGACAAAATCCGGAGGAGCAAACAACGATCCA
TTTCAATTCCTCATAGGTACGATAAAAAC	CCTAAAGAGGTGGGAGTCTTCTTGCTATTTTCTTAGTA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCTAATGGGCGAAGGAGAGCGAAGAAAAGAATGGGGCAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TTCGTACGACGGACAAATTTCCAGCGAATTCAGAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGGCGACGCTTACGAAAGAGCAAAAAGAGAAGCTGAGATA
TTTCAATTCCTCATAGGTACGATAAAAAC	TGTATTAGCATAACTCTCTATAAATGCTTCGTAATA
TTTCAATTCCTCATAGGTACGATAAAAAC	ATCGAAAGCAACTTCTTTTCTTGCTCAGCCAATATATA
TTTCAATTCCTCATAGGTACGATAAAAAC	AATAGCACGAAGAGGAACATAAGTTGTGCCGTTATAGTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	CAAATATGCTGGGATTCCCAGTGCCAATGAACCGAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GAAGCAATAGACTTGTATGCAAAATATGGGATTGTGCAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GCAAACGCAGGGATTCCGCCAAATACCAATGCCCCAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGGTCCGGCTTATTATCAACCGGTAGATTGTTTTCGA
TTTCAATTCCTCATAGGTACGATAAAAAC	CTTATCTTTCACAACTTCCTCCGGCCAAAAGGCTTCCTA
TTTCAATTCCTCATAGGTACGATAAAAAC	GACAGCAGTAGAACTTGCAAAAACGAAGCTGCAAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	TCAACAGCAAATTCAAGCTTGCACGCTTCAAACTCTTA
TTTCAATTCCTCATAGGTACGATAAAAAC	TAGAGTGGTCTAACTTTTTTTCTTTCAGCGGCTTGAAA
TTTCAATTCCTCATAGGTACGATAAAAAC	GGAAGACAAACTTGATGCTGCCAGCGCCAATGCATGATGA
TTTCAATTCCTCATAGGTACGATAAAAAC

>NC_009012|3|3|2732651-2741081|PILER-CR
TTTCAATTCCTCATAGGTACGATAAAAACT	AACTGATGGAATCTATTACAAAAGAAAAAAGTTCAG
TTTCAATTCCTCATAGGTACGATAAAAACA	TTTGCAACAAGGTGGAAATCACATCATATGGTTCGGCCTG
TTTCAATTCCTCATAGGTACGATAAAAACC	ACGCTACTGCTTGACGTACTCCCACTCTCTCTGCTTGTGG
TTTCAATTCCTCATAGGTACGATAAAAACG	CAGAAAAAACAAACCAAGGCAATGCACTCACTATGTG
TTTCAATTCCTCATAGGTACGATAAAAACG	AAAAAAGAGAATTTGATGGAAACGTGTTTTATTTG
TTTCAATTCCTCATAGGTACGATAAAAACT	GGGCGGAGACCCACAGCTTGCTGGGAGCATCACGAATAG
TTTCAATTCCTCATAGGTACGATAAAAACA	AGATTTAGGCATTATTGATATATTCGGTAGCCTTGG
TTTCAATTCCTCATAGGTACGATAAAAACG	ATTTAACAATACCAAACAATTTACCAAACTGTTCTTGAGG
TTTCAATTCCTCATAGGTACGATAAAAACC	TTCAAGAAGCCAGAGAGCGAGCCTTGGCAGAATTG
TTTCAATTCCTCATAGGTACGATAAAAACT	CTTTGATTACATACGTTTTGTCTGGCGCGACATCAG
TTTCAATTCCTCATAGGTACGATAAAAACG	GAGGGTGGTGCTCCCCTCAGGGAGCCTTCCACCTA
TTTCAATTCCTCATAGGTACGATAAAAACG	CCGCAAGGGGCGAAAGTAAAACCTCTTACACCTGAA
TTTCAATTCCTCATAGGTACGATAAAAACG	TGATGGTGGATGTTTACCGAAAAAGAGATTGAGGAA
TTTCAATTCCTCATAGGTACGATAAAAACA	TTAAGGGCGGAATAAACGGAACAATTGAATTATTTAAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TGGCACTTTAAAAAAATAAACAGTAACATTGAATTATA
TTTCAATTCCTCATAGGTACGATAAAAACG	GCGATTACAAATACCGCCGGTATTGAAAGGAGGTATTGA
TTTCAATTCCTCATAGGTACGATAAAAACA	TATTCAACAGGATAAAAGAAGAAATAGAATATTATTAA
TTTCAATTCCTCATAGGTACGATAAAAACT	ATTGTCGGGAAAGCAAATTGGACCGCAGGAACCGCGGA
TTTCAATTCCTCATAGGTACGATAAAAACG	CTGCAGAAATATATCAAATCACAAAAGAGCCAATCGAA
TTTCAATTCCTCATAGGTACGATAAAAACA	AAACTGAAATATGCAACAGCCAATGACAATACCTTA
TTTCAATTCCTCATAGGTACGATAAAAACG	CAACTTGCGTCCAGCAGATACCATAGAGTATATTTA
TTTCAATTCCTCATAGGTACGATAAAAACT	CCTTCTCCATCTTTGACAGTGTAATTTTCATTGTCAAA
TTTCAATTCCTCATAGGTACGATAAAAACA	TTACTCTTAAATATATATTAACATATTTTTATTACAA
TTTCAATTCCTCATAGGTACGATAAAAACA	TGGCTATTTTGAGTGGTTTGACCCCTCTTCTTGGCTA
TTTCAATTCCTCATAGGTACGATAAAAACT	GAAAATCTAGGATATAGTATTGGTCAATGGTTCGGA
TTTCAATTCCTCATAGGTACGATAAAAACT	ATATGTTCCTTCTACGGCTAGGTACTATGAATTGGA
TTTCAATTCCTCATAGGTACGATAAAAACG	CGCATCGTTCTTGTATTCAGGCAGTGGTCTTGAATGATA
TTTCAATTCCTCATAGGTACGATAAAAACT	GGTACCCGTGTTTTTGTTGTCTATAATAAGACTTA
TTTCAATTCCTCATAGGTACGATAAAAACC	AACAATATATTTGGCAGCCGATGAACCAGAATAATTCTCA
TTTCAATTCCTCATAGGTACGATAAAAACG	GAACATGCTATACCTGAATTAGACGCATTCAGATACAGA
TTTCAATTCCTCATAGGTACGATAAAAACG	GAATACTTTGCCATTATAGCTTTGTTCTGTGCCAA
TTTCAATTCCTCATAGGTACGATAAAAACG	AGTTCTGATATTGGATTTGGAACACTTGATATAGTA
TTTCAATTCCTCATAGGTACGATAAAAACC	CAAAAGTTCGGCAGCTCTGATTCTCTCTTTTGCGGAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TAGCGAAGCCTTTGGAGAATCGAATGTTGAATCTAA
TTTCAATTCCTCATAGGTACGATAAAAACT	ACTGCCAAAATCAGGGCTTGCATATTCTCCAAAGGA
TTTCAATTCCTCATAGGTACGATAAAAACA	TAAGAATGACAAACAAAACTAGTTCAGTTGTTGGCCTA
TTTCAATTCCTCATAGGTACGATAAAAACT	TGCCTGAATACAAGAACGATGCGCCGGAAGAACTAAAA
TTTCAATTCCTCATAGGTACGATAAAAACC	AGATGAAAGTAGCATAGCTTCAGTTTTTTGCTTTGA
TTTCAATTCCTCATAGGTACGATAAAAACA	AAAGAAATTGCAGATAGGGATGCACAGCTTGAGGAACA
TTTCAATTCCTCATAGGTACGATAAAAACC	AACTCAAAAAATGCGTCTATTTCCTTTTTCCAACAATCA
TTTCAATTCCTCATAGGTACGATAAAAACT	GACCTATAGAACTTGGTGATACATACAGTTCACCGTA
TTTCAATTCCTCATAGGTACGATAAAAACT	GAACCTTTCACTTTATTTGGCTGTGTTACTTTTGTA
TTTCAATTCCTCATAGGTACGATAAAAACC	AGGTTCAGGTTCCTAATAAGAGGGGCATAACAGCCCCTA
TTTCAATTCCTCATAGGTACGATAAAAACT	TGAGATTCTCGCTCCAACGTTCTTCAAACCGTTTGA
TTTCAATTCCTCATAGGTACGATAAAAACA	ATATATTGCAGTCCATTGTCTTGTTGTTTATCTCTA
TTTCAATTCCTCATAGGTACGATAAAAACT	AGAGAAGGATTATCATTATTTTCTTCTTTAGCAACA
TTTCAATTCCTCATAGGTACGATAAAAACC	ATACAGCCGTACAGGCGATTTGAGGTTCGTGCTCTTGCA
TTTCAATTCCTCATAGGTACGATAAAAACG	TGTAGACCATACTCGCGAAACTCTAGCGGGTCCATATTAA
TTTCAATTCCTCATAGGTACGATAAAAACG	CACCTTTTATCATATCCAAAATAATTTCCACTATCAAAA
TTTCAATTCCTCATAGGTACGATAAAAACA	AAAGCAAATTTCTCGTCTAAAGCTTCCTTTATATCATA
TTTCAATTCCTCATAGGTACGATAAAAACG	TTTTCAATTGGTTGCGTAAGAAACCCCAAGCTATCCGA
TTTCAATTCCTCATAGGTACGATAAAAACT	GAAAGCGAAGCCCTTCCTAAAGGCTATAAAACTAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	CATATGCCAGTTTATACAATCTGAATGTTTCTCTGGTAA
TTTCAATTCCTCATAGGTACGATAAAAACA	ATCTGCGAACAAGTTAGCGGAAATCATCTAACAAGA
TTTCAATTCCTCATAGGTACGATAAAAACA	GACAAGATTGATTTGCGAGAAGGTGGCTGCCGATGGCA
TTTCAATTCCTCATAGGTACGATAAAAACT	CTTCCTTCCGATGTTTACGATTATTGGGTAATTATCAGA
TTTCAATTCCTCATAGGTACGATAAAAACC	GATTGGGAAGATTTTGAAAGTCCGTATGAAGAGATGAAATA
TTTCAATTCCTCATAGGTACGATAAAAACT	TCGGACTCCAAAAATCAACATTTTCGATTGTTAAGTA
TTTCAATTCCTCATAGGTACGATAAAAACT	GCATCTTCTGTTTGGAACAACTTAGGCTTTCCTGCA
TTTCAATTCCTCATAGGTACGATAAAAACA	CACCCTGCAATATATCCAATTACTTGGCGCATAGA
TTTCAATTCCTCATAGGTACGATAAAAACG	TGATATATTTCACACAGCGAAAGTTTGGAGTGAAAGATCA
TTTCAATTCCTCATAGGTACGATAAAAACT	GCAACAAGCATTGATACGTCAAAGTCAAAACAAGGA
TTTCAATTCCTCATAGGTACGATAAAAACT	AACGATTCCGGAGAGTTGCATGGACTATCAACAAAA
TTTCAATTCCTCATAGGTACGATAAAAACA	AGAAAATGAACGGTGGTTTGACAGAGATGAAATGTAA
TTTCAATTCCTCATAGGTACGATAAAAACT	ATAGGTGGACTTGTCGGTTATGTAAGAGACGGTGGTAA
TTTCAATTCCTCATAGGTACGATAAAAACG	ACTGATGAAGAAAAAGCCTTGGAGGTTGCAAGGATA
TTTCAATTCCTCATAGGTACGATAAAAACA	GCATTTATACCGTCTGAGGGTTACTTTGAAGGGTTCCTA
TTTCAATTCCTCATAGGTACGATAAAAACA	ACCATGACACACAAAGTGAAATTCACGCACAGCGAA
TTTCAATTCCTCATAGGTACGATAAAAACA	CGCCTGAAGAAGGAGCAGGCTGAAATCTACAAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TTGTAATGCCAATAAGATTTTTCTTGTACCGAATGA
TTTCAATTCCTCATAGGTACGATAAAAACT	GATGAAGGACGCTGAAACAGGAATGTTCCAGGCTGA
TTTCAATTCCTCATAGGTACGATAAAAACT	TTGTCGCGAATGCTGATCGTGCAGAATAGGTTCCCGTA
TTTCAATTCCTCATAGGTACGATAAAAACC	CAGCATTCCGCCGACTATGGTGATCACTGGCAATAA
TTTCAATTCCTCATAGGTACGATAAAAACT	GATTCTTCTGGGTGAAGACTACATCGTGATCGAACGA
TTTCAATTCCTCATAGGTACGATAAAAACC	ATCTATCCATTGGGATATTACTTCATCAAGTGCATA
TTTCAATTCCTCATAGGTACGATAAAAACG	GACGACAAGGTCCAACTCATAGAAGCGCGATTCGGTAA
TTTCAATTCCTCATAGGTACGATAAAAACA	AAAAGAATATGCTATGCTTCCTGAATCAACGAAGCAATA
TTTCAATTCCTCATAGGTACGATAAAAACA	AAATTTCCCACAATAGCTTTTTGTTAGCCTTATCTTA
TTTCAATTCCTCATAGGTACGATAAAAACC	ACACAAAAAACGGTTCCGTCATATTCATCTGTCTGTCA
TTTCAATTCCTCATAGGTACGATAAAAACC	CGACTTAAACAAATTACTGGAATAGCAGAATTATTA
TTTCAATTCCTCATAGGTACGATAAAAACT	CGGTGCTGATGGATTACCGACTATTCGACGTGGACGA
TTTCAATTCCTCATAGGTACGATAAAAACC	AAACCATTCTGCTACGGTCAATTTACTATTTGTTATTTGA
TTTCAATTCCTCATAGGTACGATAAAAACG	TGGGTCTGGCTTATTATCAATTGGCAAGTTGTTTTCAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TTACTTTTTCCTGTAGCTCCTTTGGAGACTTGGCGA
TTTCAATTCCTCATAGGTACGATAAAAACT	TTTAGATAGTATATAGCTTTATTTGACAAAGGAACAA
TTTCAATTCCTCATAGGTACGATAAAAACC	AATGGCCCGGAGCAGTTCGCATGCTTAGTTGACAAA
TTTCAATTCCTCATAGGTACGATAAAAACA	TTACCTCCCCTGTTTTTTTACATCTGACTCACCTATA
TTTCAATTCCTCATAGGTACGATAAAAACG	CTAGAGAAGTAAAACCAAAGAAGCTAGGTCAAAATGA
TTTCAATTCCTCATAGGTACGATAAAAACG	CTCTGATGGGTCTCCTCTATACCAAATTCTATTTCTA
TTTCAATTCCTCATAGGTACGATAAAAACG	AATGGCAAAGCAAACTTAAAGAACTTCAAAAAGAAA
TTTCAATTCCTCATAGGTACGATAAAAACC	TTAAAATTCAAAAGTACAAATCTCTACGCAATCCAGA
TTTCAATTCCTCATAGGTACGATAAAAACG	TGGATTCAATCGGTGAACAAATAGCATTGAAAAACAA
TTTCAATTCCTCATAGGTACGATAAAAACT	CGATAGGGTGGGTTCACACCTTCTACTACTTCTTGCCA
TTTCAATTCCTCATAGGTACGATAAAAACG	GTTTTGGGCAGCAGTACCTTCTACAGACTCAAGTAA
TTTCAATTCCTCATAGGTACGATAAAAACA	CGAAGCAGGTTTATACAGTTTGATATTGAAATCAAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TCCTAACTGTATCACTGGACGATTACACAAAGGTTTCAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TCGTTTTCAAGCTTGTCCATCTGCGTAATAATTTTGGAA
TTTCAATTCCTCATAGGTACGATAAAAACG	CTGTTCTATTTCTGTTCTTATAGCATCTGCGTGAGCCTTA
TTTCAATTCCTCATAGGTACGATAAAAACT	TTCGTACGACGGAAGAATTTCCAGCGAATTCAGAAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	AAGCAGCAAGAAGGGCTGGTTATAGCGAGAAAACAGCA
TTTCAATTCCTCATAGGTACGATAAAAACA	CGTAAGATTCATAGCGGATTACCAGCTCAAATAGTAGAA
TTTCAATTCCTCATAGGTACGATAAAAACG	GACGCTGGCCTGACTACACTTGTGATTTTTATGGA
TTTCAATTCCTCATAGGTACGATAAAAACA	GCTAATTTCTACCGTTTCCGGTACAGGAATTATGCA
TTTCAATTCCTCATAGGTACGATAAAAACG	AAATTGTATATGATTATGTAGCAGAACATTGCAAAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	GTTTGGTGATATTTTAGCCAGTATTGAAAGTTTGGGA
TTTCAATTCCTCATAGGTACGATAAAAACC	TGGTTCTAGTGTTACATTCGTTACGAAGCAAGAGGTA
TTTCAATTCCTCATAGGTACGATAAAAACA	AGAAGGTCAAAAAATATGGGATGAGACAGCAGAAGAA
TTTCAATTCCTCATAGGTACGATAAAAACC	CATTAGATAGAGAATTGAAAAATTGCCTGCAAATGTAGA
TTTCAATTCCTCATAGGTACGATAAAAACT	CTGAAGACAAAATCCGGAGGAGCAAACAACGATCCA
TTTCAATTCCTCATAGGTACGATAAAAACC	CTAAAGAGGTGGGAGTCTTCTTGCTATTTTCTTAGTA
TTTCAATTCCTCATAGGTACGATAAAAACG	CTAATGGGCGAAGGAGAGCGAAGAAAAGAATGGGGCAA
TTTCAATTCCTCATAGGTACGATAAAAACT	TCGTACGACGGACAAATTTCCAGCGAATTCAGAAAA
TTTCAATTCCTCATAGGTACGATAAAAACT	GGCGACGCTTACGAAAGAGCAAAAAGAGAAGCTGAGATA
TTTCAATTCCTCATAGGTACGATAAAAACT	GTATTAGCATAACTCTCTATAAATGCTTCGTAATA
TTTCAATTCCTCATAGGTACGATAAAAACA	TCGAAAGCAACTTCTTTTCTTGCTCAGCCAATATATA
TTTCAATTCCTCATAGGTACGATAAAAACA	ATAGCACGAAGAGGAACATAAGTTGTGCCGTTATAGTTA
TTTCAATTCCTCATAGGTACGATAAAAACC	AAATATGCTGGGATTCCCAGTGCCAATGAACCGAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	AAGCAATAGACTTGTATGCAAAATATGGGATTGTGCAA
TTTCAATTCCTCATAGGTACGATAAAAACG	CAAACGCAGGGATTCCGCCAAATACCAATGCCCCAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	GGTCCGGCTTATTATCAACCGGTAGATTGTTTTCGA
TTTCAATTCCTCATAGGTACGATAAAAACC	TTATCTTTCACAACTTCCTCCGGCCAAAAGGCTTCCTA
TTTCAATTCCTCATAGGTACGATAAAAACG	ACAGCAGTAGAACTTGCAAAAACGAAGCTGCAAAA
TTTCAATTCCTCATAGGTACGATAAAAACT	CAACAGCAAATTCAAGCTTGCACGCTTCAAACTCTTA
TTTCAATTCCTCATAGGTACGATAAAAACT	AGAGTGGTCTAACTTTTTTTCTTTCAGCGGCTTGAAA
TTTCAATTCCTCATAGGTACGATAAAAACG	GAAGACAAACTTGATGCTGCCAGCGCCAATGCATGATGA
TTTCAATTCCTCATAGGTACGATAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009012.1\|WP_003513463.1\|2741247_2741511_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NC_009012.1\|WP_020457758.1\|2750580_2751399_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NC_009012.1\|WP_003513458.1\|2742530_2743037_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NC_009012.1\|WP_037294722.1\|2725444_2725708_-\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003513455.1\|2746073_2746958_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NC_009012.1\|WP_003513453.1\|2748651_2749374_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NC_009012.1\|WP_080514922.1\|2725601_2725889_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003518145.1\|2743055_2745308_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|187770
NC_009012.1\|WP_003513469.1\|2724056_2724776_-\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003513467.1\|2724754_2725435_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NC_009012.1\|WP_003513452.1\|2749630_2750551_+\|methylenetetrahydrofolate-reductase	unknown	unknown	gnl\|CDD\|238299
NC_009012.1\|WP_020457757.1\|2745329_2746055_-\|CRISPR-associated-protein-Cas5	cas5	cd09693_cas5_CAS-I	gnl\|CDD\|273860
NC_009012.1\|WP_020457683.1\|2728262_2729021_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NC_009012.1\|WP_003513460.1\|2741524_2742517_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NC_009012.1\|WP_020457682.1\|2726778_2728263_+\|IS21-like-element-ISCth9-family-transposase	unknown	unknown	gnl\|CDD\|226950
NC_009012.1\|WP_003513473.1\|2722447_2723380_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NC_009012.1\|WP_003513454.1\|2746963_2748640_-\|hypothetical-protein	cas8b1	mkCas0195_cas8b1_CAS-I-B	unknown
NC_009012.1\|WP_003513475.1\|2721585_2722146_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271192
NC_009012.1\|WP_003513478.1\|2720213_2720642_-\|purine-binding-chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|223905
NC_009012.1\|WP_003513471.1\|2723352_2723907_-\|phosphatidylethanolamine-binding-protein	unknown	unknown	gnl\|CDD\|376471

Protein	Function_ID	Function_description	E-value
NC_009012.1\|WP_003513463.1\|2741247_2741511_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.02576e-30
NC_009012.1\|WP_020457758.1\|2750580_2751399_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	1.49098e-102
NC_009012.1\|WP_003513458.1\|2742530_2743037_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.83668e-75
NC_009012.1\|WP_003513455.1\|2746073_2746958_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	7.89741e-108
NC_009012.1\|WP_003513452.1\|2749630_2750551_+\|methylenetetrahydrofolate-reductase	gnl\|CDD\|238299	cd00537, MTHFR, Methylenetetrahydrofolate reductase (MTHFR). 5,10-Methylenetetrahydrofolate is reduced to 5-methyltetrahydrofolate by methylenetetrahydrofolate reductase, a cytoplasmic, NAD(P)-dependent enzyme. 5-methyltetrahydrofolate is utilized by methionine synthase to convert homocysteine to methionine. The enzymatic mechanism is a ping-pong bi-bi mechanism, in which NAD(P)+ release precedes the binding of methylenetetrahydrofolate and the acceptor is free FAD. The family includes the 5,10-methylenetetrahydrofolate reductase EC:1.7.99.5 from prokaryotes and methylenetetrahydrofolate reductase EC: 1.5.1.20 from eukaryotes. The bacterial enzyme is a homotetramer and NADH is the preferred reductant while the eukaryotic enzyme is a homodimer and NADPH is the preferred reductant. In humans, there are several clinically significant mutations in MTHFR that result in hyperhomocysteinemia, which is a risk factor for the development of cardiovascular disease.	2.49944e-08
NC_009012.1\|WP_003518145.1\|2743055_2745308_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	1.43791e-67
NC_009012.1\|WP_003513453.1\|2748651_2749374_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.51211e-31
NC_009012.1\|WP_003513467.1\|2724754_2725435_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.99729e-67
NC_009012.1\|WP_020457757.1\|2745329_2746055_-\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.10366e-12
NC_009012.1\|WP_020457683.1\|2728262_2729021_+\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.3689e-75
NC_009012.1\|WP_003513460.1\|2741524_2742517_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	1.27933e-166
NC_009012.1\|WP_020457682.1\|2726778_2728263_+\|IS21-like-element-ISCth9-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.38159e-24
NC_009012.1\|WP_003513473.1\|2722447_2723380_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.16586e-25
NC_009012.1\|WP_003513475.1\|2721585_2722146_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271192	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain contains six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	2.52085e-54
NC_009012.1\|WP_003513478.1\|2720213_2720642_-\|purine-binding-chemotaxis-protein-CheW	gnl\|CDD\|223905	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms].	2.02437e-39
NC_009012.1\|WP_003513471.1\|2723352_2723907_-\|phosphatidylethanolamine-binding-protein	gnl\|CDD\|376471	pfam01161, PBP, Phosphatidylethanolamine-binding protein.	1.04619e-21

>NC_009012.1|WP_020457683.1|2728262_2729021_+|ATP-binding-protein
MPVNKMLIETYMKKLKMPQVAKTYESLAREAADNNLDYEEYLLCVLEQEVHQRENNRIQRGIRQAGFPVIKTIESFDFLAIPSLNKPRVLKLMQGEYIRRRENVILIGNSGVGKTHIATALGYEACRQGMKVKFYTAAGLINELLAAQQEYRLNKLEKQWLAPHLVILDELGYVPFSKIGAELLFQFCSSRYERGSLIITTNLEFPRWTEVLGDEQMTAALLDRLTHNAHILNINGESYRFKQALSKQANND
>NC_009012.1|WP_020457682.1|2726778_2728263_+|IS21-like-element-ISCth9-family-transposase
MIKMAQLEDIRKMYFMEGLSIREINRRTGIHRDTISKYISLEEPKPPKYKLTKERTHPVLGPYIPMIKQIIEDDKTRHRKQRHTGTKIFETLKKEGFSGGYNTVMDYLRKEYRKQREAFLPLEFELGAYAEVDWTEAYFYLKGKETKAHLFVMKLRGSGGFYVRAYPFEKQEAFFDGHIKCFEFMNGVPYKIAYDNLKTAVKKILEGSNREEQEQFIALRTHYLYESSFCRPAKGSDKGGVENAGKEAVRRFFVPYPEVDSFEELNEYLHNECIKLLESNPKWEAERAALRPLPAVRFDGARYKEAKVNRYSMVQFETNRYSVPTIYVGEKVTVKATADEVKILNKGTMIASHPRIYGRYQEQIKLDHYLELLLQKSRALGNTKVYKPQMLAPVYEQYRRSLNARSPRGNREFVKILMLHRDYPTALVTEAIEIAMAYNVYSYDGVFNILGQLLVSGSPKTAPVSKDKLQGIPEVVVIPPDLSKYSALMSGGGQ
>NC_009012.1|WP_080514922.1|2725601_2725889_+|hypothetical-protein
MIIDKRVYLPIKGIYSKFILADINSTNVPYPVKNPMTEPLYIDAILIKIVVNVIRKLHENHKKKPYTVRPLPEVLSYSNCREPAKSQQIKLNISC
>NC_009012.1|WP_037294722.1|2725444_2725708_-|hypothetical-protein
MGFLTGYGTLVLLISASINFEYIPLIGKYTLLSIINPASIMFLYLLEQKIVVFFGFVYYIALTAFLINMCASLVNKIDVSIPLRENG
>NC_009012.1|WP_003513467.1|2724754_2725435_-|ABC-transporter-ATP-binding-protein
MHTIELRNISKVIKNNIVLSNINYKFESGKVYGLKGRNGSGKSMLLRTISGLIRPTSGSVIIDGKELHKEIESPGNIGIVVENAGLYPDFTGFYNLKYLAGIMGQISDDEIINAIKRVGLDLYDKKIVKKYSLGMKQKIVIAQAIMEKPDFLLLDEPTNALDESGVKLLREIVQEEATRGALVIIASHNQEDIELLCDKVIIMADGKISDEYVNSREMNLCSEETQ
>NC_009012.1|WP_003513469.1|2724056_2724776_-|hypothetical-protein
MFRRNAIISVVIIILTVILGQIAKANLLVDNKILKIKTVDELNKLVFQFDLSLDDYIYPNYYTPEKALEVNDRAEIIAVVSPTGRIEQYHWLLRQEVVINKVVRGDKSLEGMTAKLDVSNGLVYYNIDEKRDPFDPRGFNLYYTNTVNIMQPGNEYLAFFNRMPLQDYAEDDIIFNCISTEYSYFNLSLPENDLLITDATANYKLEDLKEYEYFTGSKRMLDLWYDVKEAAVKKYLDPQ
>NC_009012.1|WP_003513471.1|2723352_2723907_-|phosphatidylethanolamine-binding-protein
MKRVSVFLLICVLAILTFSACSKSKQSLKTIKPGEEIKITSSSLNSDGKWKSVITAYMGENKSPQLSWTPVEGASCYAIYMIDTTASNWCHWIAKDVKVTELELGAELENSQYIGPYPPGGVHTYEVMIFALKNSPDSYEGYFDNSNPSLDKIIEALDTSGGTTGNILARGVLSGTYKAGDIVE
>NC_009012.1|WP_003513473.1|2722447_2723380_+|AraC-family-transcriptional-regulator
MDLFTRSYDKDWNRIVYLKVLENQEACLHLKDDKTCKLILLLEGNPTIRYNNQTAFIIAPSVLCLNHLDTVEFDYNPNCKMTVLFFRPSALNDQLEYSAFHSNLYEKMVGTTLFQDMVLLSSFYDINDSKRELILLDTVSAVSLMQLLNKINQELTEQKDGYWPCRSRSYFIELLFFLEGLRCNESLQKMRIILGKNKNSIVHNIIQYLNQNIDKKITLEHLEKTFACNRNQINKEFQKELNTTVMKYFTQMRMQLASILLRDTEIPILEVALRVGYSDAGYFSKTFKLYSGISPSEYRNSFYSTISPAL
>NC_009012.1|WP_003513475.1|2721585_2722146_+|tyrosine-type-recombinase/integrase
MTVEPIRNKAKIKQMYYYLNGKDPKYGLLFKFGLNTGLRISDILPLKVKDIYTPDNRFREYLILKEKKTDKEKKIKINDSLKKEIENYVKTHNLSQEDCLFSSKKGGHIGRVQSYRVLREAAEAVGIENFGTHSLRKTWGYWTYKMSRYNIGLIMDTFNHSSQRITLRYIGVNQDQKDELYSLVQF
>NC_009012.1|WP_003513478.1|2720213_2720642_-|purine-binding-chemotaxis-protein-CheW
MMNDLLTSQYVAYELAGEKYALKISDVYEIIKMQSITPIHNSKPFLEGVINLRGKIIPVANLHKRFGLGNYTPTKKTRIVVVKSRDEMIGIVVDKVNQVIRFSDIQPPPEMVAGIDGSYFEGVGITDEGVISILKIDKVLHE
>NC_009012.1|WP_003513463.1|2741247_2741511_-|CRISPR-associated-endonuclease-Cas2
MFVIMVYDAGERRNSKVLKVGRKYLHWVQNSVFEGELTEANYHKLKEEVRRKVDNEEDSVIFYKFRTMKYTEREVIGKNVDPNNFIL
>NC_009012.1|WP_003513460.1|2741524_2742517_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKKSAFIFSDGELKRKDSTVLFESEDSKNYLPIEDISDIYIFGEVTVTKKFLELATQKEILLHFYNYNEYYVGTYYPREHYNSGFMILKQAEHYLDEEKRMAIAKKFIHGSVKNMLAVLKYYNNREKDLDRQITAISDLAEKIDEMDEINKLMAIEGNIREIYYGSFDIIVDDEYFEFGKRTKQPPKNRMNSLISFGNSILYTTVLSEIYKTHLDPRIGYLHSTNHRRFTLNLDVAEIFKPIIVDRVIFTLIGKKMLGEKHFEEKAGGIVLNDKGRKQFVAQMLEKLNATLMYKPLGREVSYRRLIRLELYKLEKHLMGEQEYKPYVASW
>NC_009012.1|WP_003513458.1|2742530_2743037_-|CRISPR-associated-protein-Cas4
MYEADVRINGTLIWYYFICKREVWLISHGITADQEDENIEIGRFIHENAYSREKKEIDFDNFKVDVADSIDGKIIVQEVKKSSKFKKSARMQLLFYIYEIKKSGIDARGILLFPEERKREEVVLDEASQKELDSVIKDIFKIVNLEKPPIPEKCKYCRNCAYSELCWA
>NC_009012.1|WP_003518145.1|2743055_2745308_-|CRISPR-associated-helicase/endonuclease-Cas3
MYFAKPVDNYEGTYEYHVKRCAEILEFEIRSKYPAFKRILSSYGFDVEDFIEKMKTAVVFHDFGKLNPYFQEYMKRKIEKKKLSGIKHFRHEVLSCLFLMSNEKSKEAYFPYHILAVLGHHKMLSSDLKSFERERVWQDRWPEISEDAVKHAMEIASEFGIKVDGRSGPQGKSANNYLNALLKLALMLYEKDREKLKVVYSVSKGLLHNCDWIASSNLDYNRVCLIGVSANDIEKKLKEKLEKENKKYVRREFHSICANAVGDVVAIAPTGSGKTEAALMWALNSETTKIIFLMPTMVTSNSLYERLSTHYFPKESCGLSHSGAETYFYKKSKEDDTENDYDWSQILHQKAFIPAVMVSTVDQVLSTEFHTGLWNQKEYALVGSSVIFDEIHAYDGYTIGLITGVIKKIKKYGGRVMLMSATMPKFLRNHFLDLLDSKCLVVAEELMERASNEWAYLDTDLEGIREKVLKEVSEGKKVALIVNDVETAKKEYKYYSKKGFDVLCLHSEFTMKDRQEKEGRLTSKEGNPYRLVISTQVIEVSLDVSFDVMFSECAPIDSLVQRAGRCNRHGLINFGRFYVFNPSDTAVKYVYRKQKDILDKTVEVIRKNSGRLTEKQIMAMVEEVYEGFNLYDEDYKLGIDIVRDIEQRYNFFDVNIFQEDENLSTRKFDVVKVPVIPADEYMEIVEKLFESKDYKMISLYEIPVSISKFKKYIRRLEISNKYNLPIFKIKYSSEYGIDYEEDDSNTCYLY
>NC_009012.1|WP_020457757.1|2745329_2746055_-|CRISPR-associated-protein-Cas5
MYGLIVTLYAKTASFRDPGAQLYHETMSLPPPSTITGIAGAALGLSFEDALAFMKENAVMVGCNGSSEGRGKDLWNYTKIKSGEITNAIIIRNFLADLKVEIFFACEKREVITRLADAFENPVYAITLGNSDEIAKICSIEIFEEISCEKKKILTNTWLPGDYSRKLKVDWEKVKKAKISLTLKPPIVKKLPCDFEFDANGVRKAVKYLDITFMGDNHILETEAEVLVFGNKFAAVMKHEG
>NC_009012.1|WP_003513455.1|2746073_2746958_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKDAKAITVTYLTKASYSSLNGADKEADNIVSIKKIQMNDGKEYPYCSSQAVRRALREQLASMGWELSETTVAKQKKGAASTLCEPSKYIDDDLFGFMNADSSKTVKRTSPVRVSPLVALEPYGGGMDFGTNYMSVKAGGTPNIFETEIHSGYYVGTVLIELDRVGEKSPGDEYDLSLSQDEKKKRVNALVDAIQNLWTVGRQSRFLSDVSPKFVAAAVLKVKNPIFLECIKIGSSGSVDMSLVKNTVDDFHKQIIDYAIGERKGFFAQDSETALPLGQCFEKIHSWVEEYYKD
>NC_009012.1|WP_003513454.1|2746963_2748640_-|hypothetical-protein
MEYSIALRRHWWFDAGIAGLYSISKSRDDRLLEFDVEVKVDSENQALTFEGKDTDTLRAYFETCYEILAERYWNVSTIKQKENPELVVYDKEKDEIMLMPKRNPTPVVSLFIGARSWQGEGIPYGDITEPLKSRVDEFLEKTRAKLWGSKKLLLLSQPVCHQKLTILPEEKKKGKTEVCCVCGKHSLYMIEVGLPSFLLFASSNATKSFNSQGKNPAKLCWECEFISKFAIESASYKRTNDSIFVIQVTSPDIDKLIEMQKEFGSLSELRMLDDKYFYANIGLEEDSLIKKCSAPYELLWAFMEEKYSLLLKESSEGEETFDDVSADNFFFEFIEKLSKMPVQIYVLYATDSGQTFLTKNLVLYDELGYFYRLIHHMKKSGVNTRKLFSSLYEEKYDFREKILRNVLRKNSILRHIEQFAFRMVMRDQRISMGNILKFTIEYEQIIRGDEMNKEQIETAVNLGKQIVIQAVETARAENENEKQALKKIKGDLYQLRKSRTKTDFINQLNNLQFRYGIAVSKNILDGILEEVDFEDFRAYCVLGALNVYNAKNNKDKED
>NC_009012.1|WP_003513453.1|2748651_2749374_-|CRISPR-associated-endoribonuclease-Cas6
MRFKVGIEFDESLELPFNYNKILQGFIYRNIMDKDLARFIHDRGFSYEKRKYKMFTFSRLQGKFSIDSKKKKIIYQSPVELVVSSCYEDFFIDLSLSLLRRDVEIAGHKAYVSKMDIIMEEPKSIQKIRMLSPVTAYSTLDDKRTVYFSPYNHDFKRIIKENLIKKYKAFYKDDSKDNVDFDIELVSDKYAKVISSYDGFIIEGWMGDFVLKGDQEVIKLAYDAGIGGKNSQGFGCFKLI
>NC_009012.1|WP_003513452.1|2749630_2750551_+|methylenetetrahydrofolate-reductase
MLKQKILNRESGIITYGITPPKKNNTEEKIKEISQKHIERISGLDIDGLVIYDLQDEKERVSEERPFPFIETIDPQIYSENYLKDLKIPKIIYRCVGKYTPDEFRRLTRPVSGQDAFSVFVGAASRNQSVLLKLSDAYKIRQDVNPDLLLGGVAIPERHMKNTDEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMKWLGISIPRWLENDLMNCEDILNKSVSLSKSIFNELMEFCLEKGIPIGCNIESVSVRKVEIEASIALAKDIKYIMKGI
>NC_009012.1|WP_020457758.1|2750580_2751399_-|undecaprenyl-diphosphate-phosphatase
MLELIKAIFLGIVEGITEWLPISSTGHMILVEEFINMNLSDEFMEMFRVVIQLGAIMAVVVLYWNKLFPFSFEDRIQIKKDTFSLWIKVLAATLPAALIGVPFDDKIDELFYNYITVAITLIVYGVLFIIMENRNKSKIPAISTFEELGYKAVLLIGAFQVLALIPGTSRSGATILGAIMIGCSREIAAEFSFYLAIPVMFGASLLKLVKFGFAFSQTELIILLTGMIVAFAVSIFAIKFLMGYIKRNDFKAFGYYRIILGLIVVLYFLAVR

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Crispr_ID: NC_009012_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009012_4

3785203-3791136

TypeI-B

Consensus_repeat	Method
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CRISPRCasFinder
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACNN	CRT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	PILER-CR

80 spacers

cas8b1,cas7,cas5,cas3,cas6,csm3gr7,csx10gr5

The CRISPR arrays of NC_009012_4

>merge|NC_009012|4|3785203-3791136|CRISPRCasFinder,CRT,PILER-CR
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATGTAGATGAATGATTACGATGTTGGAGAAATATTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTGTATCCGCATGTCCTACAGCAGATGTCACATCTGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATCTTTTGTATATCAAAGGAAGCTACTTCTGTAATTAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAGTGCTGCAAACATCACAGCAGTATTCAATCAGGAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTCGCATTTTCTACATCAAACAAAGTTGCTCCGTCGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCCTCCAAGTTTCAGTCTCCATGAAGTACCATTCCCCTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTGAAACTTGCCGGTTTTTATGGCGTATCTGTAGATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTCAAAGTGCACAAATAAAAAGTGCTTGTGTCAATACGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCACAAGTTGCAAATGATGTATTGCCGCCGGTAATTTCCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGCCATCAGTGGCCGATAGATAAGGCACAATATCTAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTTGCTATTCGAGCAGAAAGAAACCCAAAAGTTATCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTGATATTATATTGAATCTGTTTAAATGAGATATTCAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCCACTGTCTTCTGTCAATTGTTATTATATCATATATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATGTATGTTCAAATACATCATAAATATGGTAAGGAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATCCTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTCCCCGCCGTGTTAATCCGATTGTAAACCTATTCGTCAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTAATTTGATTTATAAAAATGACTTAATTACAAATGAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTATAGATATGTATGGAGTACCGAAAGGCGACCCATGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAATACGGTGTCAGTGACGTTTTGAACCTCAACCAAGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTCTCCCATGTTCATTCCTCCTCTTTTCAAATTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAGATAGACGTACATATGACAGGAGGTTGAAGTTATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGAAGCTATGCCTTATGTGGGTGGACGCAGTTCTTCAGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTATTTTGTAATAATCACTTTTAATTTCATAACCTACAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAAATAGTACATAGGTGGAGAGCAGCAAACCCGCGAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTTGCAACGTTTCCGTTGCTGTTAACTACATAGCAAGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACGATGAGCTTAAAAACGATTACTAAAGAGAGGATGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATTTTTGCTTCTCTAGCTTGTCTTTTCGTATGTATGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTGCTTTAGCGTGATCCTTGTGACCGTGCGATACAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTGGACTTTGCTCAGGTCATTGGCCCGGAGAAACTGCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTCATTCTTGCAAGCCTGAATCAGCCCTTTTAGATAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGGTTCTATGATTTCGATATACGACCCGCCTCTATATCCGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTTTTCTTAATTTCAAATACTCTTTTTGCCATTTTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAATCCCAGCGAAGTCCTTTAGAGAACAGATTTTTGAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTAATTTTAAAGACTTATTCCGCAATGATATAAATATGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTTTGCCTAAGAAGAATAAAAGTATTCGTAGAATATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTAACATTATTCACACCTCCCATCAACGAACCTTTTTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTTAGCCGTTGCAGTGGGCTTACCTTCTAAAAATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACTTTCCTTGATATGTTTACCTGTAAAGTAAAAATAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTTATATATAGAACATAAATTTTTCTATAATATTAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCCCTTACAGTGGCGATATTTGTGGAATGAGGCTGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATCTCTTGTAGAATTTTCTCTGCCTTTTCTAAGCTACGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACAGTTATCATAGGCTATCCTCCTTATAAATGTTAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACAATAATCCAAAAGCATTTCTACTGCTTTTGGAAATTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATATTTACTCCGGCATCCCTCAGCCGGCGAAAAAGGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATAATTCTTCTCGTTTTTGTTTTAATTCGTTTATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTAATAAGCTGTCCAATCACCTCCTAGTTTTCCTGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTAGAACTTGAAAGAGAATCCTTCAGGGAGAGTGGTACTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTATCTTCAAAGTAATAGCTGTTATATGTGTCAAGTTCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTAATTCATCGCCATTTTTGCCTATAAGTCCATAAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTTCTTCGAAGCTACTAAAGGTGGCCGTGCAGTAGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATAGATAAGGCTATTGCAAGAGTAGCGAATGTGCTAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCAAATATTTCAGAAGCTATTGCGGATATATTTACTGTGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTGAATTCCTGCAATGTGGCAGGCTTTTCTCAACCTAGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTCCCTGTGATTTCAGCCAATTTATCGCATTTTCAATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACATACAGTTCGGTGTTTTCATCTAGTGCTACATTTATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCCAGCAGGTTGAGCGTTAGGCAGGTTTCCCTGCCCGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTGGAAGATGCGTTGTTTATGTCAGCAATTTCCGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCAAAATGGCAGGTGGTAAAACCACAGCTAATACATCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTTTCATCAACATCCATCTCGTCTACATAGAACTCAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATAACATATTTTAAAGCAAAAAGCAGAAAATCACTGGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTGATTGTAAAGGAATATGTATCCCCAAGCCTTACAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTGGATAGTGCAAACATAGATGAAGCCTCCGTAGGCCTTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTCTATTTCAGCAACAATATATTTGGCAGCCGATGAATGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATCATTGTATATATCTTTGGAGTAACGTATAATACCCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACAGGAACGTGCGTTCTCTGGACGAGGTAACTATCGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTAGCACACAACAGCAAAAAAACAAAGAAAAAAAGAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGCACCAACTTGTCTTTTTTGATGAGGCTTGCAACAAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATAATGTGCTGCTGGATGCCCGTACAGTCTTCCACTGTAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTAGATTGCGAAAAGCCTGCCACATTGCAGGTCACAAGGTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTGTTTTTTCACTTATAGACTTAATTCAGTGTGGCGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACCTTTCTCAATGGCTGACTTCGATGCGCCCTGGGCAAGCATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGTGCTGCTATCTCGGCTATTCTTTCATCTATACTCAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTTGCTCTTTATCCGGTGCTCTTATCTCATTCACAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACACGAGAACGGGAAAGCAATATTGAGAAAACCCTTTGGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTGGCGGCATAGCTTCTATTATAGAAAATTCTACTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACTTATATCGAAGAAAAAAGAACAAAAGTGAGGCGATTGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACATAATTTCGGGAGTGTAGAATTTCAACTCGGCAATAAGAGTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAACGAATGATTGAATCAATAACCATTATTGCCTGCAATTAGTTGAAGTGGTACTTCCAGAAACAAGGATTGAAACCATACTTCTATCAGTTTGTCGCGTTCTTCTCTTTCCAATGTTGAAATGGTATTTCCAGTAAAATGGGAATTCAAAT

>NC_009012|4|4|3785203-3790988|CRISPRCasFinder
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGTAGATGAATGATTACGATGTTGGAGAAATATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTGTATCCGCATGTCCTACAGCAGATGTCACATCTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTTTTGTATATCAAAGGAAGCTACTTCTGTAATTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AGTGCTGCAAACATCACAGCAGTATTCAATCAGGAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCGCATTTTCTACATCAAACAAAGTTGCTCCGTCGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCTCCAAGTTTCAGTCTCCATGAAGTACCATTCCCCT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGAAACTTGCCGGTTTTTATGGCGTATCTGTAGATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCAAAGTGCACAAATAAAAAGTGCTTGTGTCAATAC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CACAAGTTGCAAATGATGTATTGCCGCCGGTAATTTCC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GCCATCAGTGGCCGATAGATAAGGCACAATATCTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTGCTATTCGAGCAGAAAGAAACCCAAAAGTTATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGATATTATATTGAATCTGTTTAAATGAGATATTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCACTGTCTTCTGTCAATTGTTATTATATCATATATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGTATGTTCAAATACATCATAAATATGGTAAGGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATCCT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCCCCGCCGTGTTAATCCGATTGTAAACCTATTCGTCAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTAATTTGATTTATAAAAATGACTTAATTACAAATGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATAGATATGTATGGAGTACCGAAAGGCGACCCAT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATACGGTGTCAGTGACGTTTTGAACCTCAACCAAG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTCTCCCATGTTCATTCCTCCTCTTTTCAAATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AGATAGACGTACATATGACAGGAGGTTGAAGTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GAAGCTATGCCTTATGTGGGTGGACGCAGTTCTTCAGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATTTTGTAATAATCACTTTTAATTTCATAACCTACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AAATAGTACATAGGTGGAGAGCAGCAAACCCGCGAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTGCAACGTTTCCGTTGCTGTTAACTACATAGCAAG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGATGAGCTTAAAAACGATTACTAAAGAGAGGATGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTTTTGCTTCTCTAGCTTGTCTTTTCGTATGTATG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTGCTTTAGCGTGATCCTTGTGACCGTGCGATACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGGACTTTGCTCAGGTCATTGGCCCGGAGAAACTGC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCATTCTTGCAAGCCTGAATCAGCCCTTTTAGATA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GGTTCTATGATTTCGATATACGACCCGCCTCTATATCCG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTTTCTTAATTTCAAATACTCTTTTTGCCATTTTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATCCCAGCGAAGTCCTTTAGAGAACAGATTTTTGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTAATTTTAAAGACTTATTCCGCAATGATATAAATATG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTTGCCTAAGAAGAATAAAAGTATTCGTAGAATATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTAACATTATTCACACCTCCCATCAACGAACCTTTTTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTAGCCGTTGCAGTGGGCTTACCTTCTAAAAATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTTCCTTGATATGTTTACCTGTAAAGTAAAAATA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTATATATAGAACATAAATTTTTCTATAATATTAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCTTACAGTGGCGATATTTGTGGAATGAGGCTGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTCTTGTAGAATTTTCTCTGCCTTTTCTAAGCTAC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGTTATCATAGGCTATCCTCCTTATAAATGTTAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATAATCCAAAAGCATTTCTACTGCTTTTGGAAATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTTACTCCGGCATCCCTCAGCCGGCGAAAAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTCTTCTCGTTTTTGTTTTAATTCGTTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTAATAAGCTGTCCAATCACCTCCTAGTTTTCCTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGAACTTGAAAGAGAATCCTTCAGGGAGAGTGGTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TATCTTCAAAGTAATAGCTGTTATATGTGTCAAGTTC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTAATTCATCGCCATTTTTGCCTATAAGTCCATAAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCTTCGAAGCTACTAAAGGTGGCCGTGCAGTAGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGATAAGGCTATTGCAAGAGTAGCGAATGTGCTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAATATTTCAGAAGCTATTGCGGATATATTTACTGTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGAATTCCTGCAATGTGGCAGGCTTTTCTCAACCTAGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTGTGATTTCAGCCAATTTATCGCATTTTCAATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATACAGTTCGGTGTTTTCATCTAGTGCTACATTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCAGCAGGTTGAGCGTTAGGCAGGTTTCCCTGCCCG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGGAAGATGCGTTGTTTATGTCAGCAATTTCCGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAAATGGCAGGTGGTAAAACCACAGCTAATACATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTTCATCAACATCCATCTCGTCTACATAGAACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAACATATTTTAAAGCAAAAAGCAGAAAATCACTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGATTGTAAAGGAATATGTATCCCCAAGCCTTACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGGATAGTGCAAACATAGATGAAGCCTCCGTAGGCCTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTATTTCAGCAACAATATATTTGGCAGCCGATGAAT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATTGTATATATCTTTGGAGTAACGTATAATACCC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGGAACGTGCGTTCTCTGGACGAGGTAACTATCGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGCACACAACAGCAAAAAAACAAAGAAAAAAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GCACCAACTTGTCTTTTTTGATGAGGCTTGCAACAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATGTGCTGCTGGATGCCCGTACAGTCTTCCACTGTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGATTGCGAAAAGCCTGCCACATTGCAGGTCACAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTTTTTTCACTTATAGACTTAATTCAGTGTGGC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTCTCAATGGCTGACTTCGATGCGCCCTGGGCAAGCATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGCTGCTATCTCGGCTATTCTTTCATCTATACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTGCTCTTTATCCGGTGCTCTTATCTCATTCACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGAGAACGGGAAAGCAATATTGAGAAAACCCTTTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGGCGGCATAGCTTCTATTATAGAAAATTCTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTATATCGAAGAAAAAAGAACAAAAGTGAGGCGATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTTCGGGAGTGTAGAATTTCAACTCGGCAATAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC

>NC_009012|4|4|3785203-3791136|CRT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGTAGATGAATGATTACGATGTTGGAGAAATATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTGTATCCGCATGTCCTACAGCAGATGTCACATCTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTTTTGTATATCAAAGGAAGCTACTTCTGTAATTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AGTGCTGCAAACATCACAGCAGTATTCAATCAGGAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCGCATTTTCTACATCAAACAAAGTTGCTCCGTCGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCTCCAAGTTTCAGTCTCCATGAAGTACCATTCCCCT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGAAACTTGCCGGTTTTTATGGCGTATCTGTAGATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCAAAGTGCACAAATAAAAAGTGCTTGTGTCAATAC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CACAAGTTGCAAATGATGTATTGCCGCCGGTAATTTCC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GCCATCAGTGGCCGATAGATAAGGCACAATATCTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTGCTATTCGAGCAGAAAGAAACCCAAAAGTTATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGATATTATATTGAATCTGTTTAAATGAGATATTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCACTGTCTTCTGTCAATTGTTATTATATCATATATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGTATGTTCAAATACATCATAAATATGGTAAGGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATCCT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCCCCGCCGTGTTAATCCGATTGTAAACCTATTCGTCAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTAATTTGATTTATAAAAATGACTTAATTACAAATGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATAGATATGTATGGAGTACCGAAAGGCGACCCAT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATACGGTGTCAGTGACGTTTTGAACCTCAACCAAG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTCTCCCATGTTCATTCCTCCTCTTTTCAAATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AGATAGACGTACATATGACAGGAGGTTGAAGTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GAAGCTATGCCTTATGTGGGTGGACGCAGTTCTTCAGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATTTTGTAATAATCACTTTTAATTTCATAACCTACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AAATAGTACATAGGTGGAGAGCAGCAAACCCGCGAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTGCAACGTTTCCGTTGCTGTTAACTACATAGCAAG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGATGAGCTTAAAAACGATTACTAAAGAGAGGATGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTTTTGCTTCTCTAGCTTGTCTTTTCGTATGTATG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTGCTTTAGCGTGATCCTTGTGACCGTGCGATACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGGACTTTGCTCAGGTCATTGGCCCGGAGAAACTGC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCATTCTTGCAAGCCTGAATCAGCCCTTTTAGATA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GGTTCTATGATTTCGATATACGACCCGCCTCTATATCCG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTTTCTTAATTTCAAATACTCTTTTTGCCATTTTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATCCCAGCGAAGTCCTTTAGAGAACAGATTTTTGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTAATTTTAAAGACTTATTCCGCAATGATATAAATATG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTTGCCTAAGAAGAATAAAAGTATTCGTAGAATATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTAACATTATTCACACCTCCCATCAACGAACCTTTTTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTAGCCGTTGCAGTGGGCTTACCTTCTAAAAATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACTTTCCTTGATATGTTTACCTGTAAAGTAAAAATA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTATATATAGAACATAAATTTTTCTATAATATTAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCTTACAGTGGCGATATTTGTGGAATGAGGCTGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTCTTGTAGAATTTTCTCTGCCTTTTCTAAGCTAC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGTTATCATAGGCTATCCTCCTTATAAATGTTAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATAATCCAAAAGCATTTCTACTGCTTTTGGAAATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTTACTCCGGCATCCCTCAGCCGGCGAAAAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTCTTCTCGTTTTTGTTTTAATTCGTTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTAATAAGCTGTCCAATCACCTCCTAGTTTTCCTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGAACTTGAAAGAGAATCCTTCAGGGAGAGTGGTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TATCTTCAAAGTAATAGCTGTTATATGTGTCAAGTTC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTAATTCATCGCCATTTTTGCCTATAAGTCCATAAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCTTCGAAGCTACTAAAGGTGGCCGTGCAGTAGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGATAAGGCTATTGCAAGAGTAGCGAATGTGCTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAATATTTCAGAAGCTATTGCGGATATATTTACTGTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGAATTCCTGCAATGTGGCAGGCTTTTCTCAACCTAGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTGTGATTTCAGCCAATTTATCGCATTTTCAATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATACAGTTCGGTGTTTTCATCTAGTGCTACATTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCAGCAGGTTGAGCGTTAGGCAGGTTTCCCTGCCCG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGGAAGATGCGTTGTTTATGTCAGCAATTTCCGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAAATGGCAGGTGGTAAAACCACAGCTAATACATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTTCATCAACATCCATCTCGTCTACATAGAACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAACATATTTTAAAGCAAAAAGCAGAAAATCACTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGATTGTAAAGGAATATGTATCCCCAAGCCTTACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGGATAGTGCAAACATAGATGAAGCCTCCGTAGGCCTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTATTTCAGCAACAATATATTTGGCAGCCGATGAAT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATTGTATATATCTTTGGAGTAACGTATAATACCC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGGAACGTGCGTTCTCTGGACGAGGTAACTATCGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGCACACAACAGCAAAAAAACAAAGAAAAAAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GCACCAACTTGTCTTTTTTGATGAGGCTTGCAACAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATGTGCTGCTGGATGCCCGTACAGTCTTCCACTGTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGATTGCGAAAAGCCTGCCACATTGCAGGTCACAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTTTTTTCACTTATAGACTTAATTCAGTGTGGC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTCTCAATGGCTGACTTCGATGCGCCCTGGGCAAGCATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGCTGCTATCTCGGCTATTCTTTCATCTATACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTGCTCTTTATCCGGTGCTCTTATCTCATTCACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGAGAACGGGAAAGCAATATTGAGAAAACCCTTTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGGCGGCATAGCTTCTATTATAGAAAATTCTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTATATCGAAGAAAAAAGAACAAAAGTGAGGCGATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTTCGGGAGTGTAGAATTTCAACTCGGCAATAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GAATGATTGAATCAATAACCATTATTGCCTGCAATTA
GTTGAAGTGGTACTTCCAGAAACAAGGATTGAAACCA	TACTTCTATCAGTTTGTCGCGTTCTTCTCTTTCCAAT
GTTGAAATGGTATTTCCAGTAAAATGGGAATTCAAAT

>NC_009012|4|4|3788076-3791060|PILER-CR
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCTTACAGTGGCGATATTTGTGGAATGAGGCTGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTCTTGTAGAATTTTCTCTGCCTTTTCTAAGCTAC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGTTATCATAGGCTATCCTCCTTATAAATGTTAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	AATAATCCAAAAGCATTTCTACTGCTTTTGGAAATTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTTACTCCGGCATCCCTCAGCCGGCGAAAAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTCTTCTCGTTTTTGTTTTAATTCGTTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTAATAAGCTGTCCAATCACCTCCTAGTTTTCCTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGAACTTGAAAGAGAATCCTTCAGGGAGAGTGGTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TATCTTCAAAGTAATAGCTGTTATATGTGTCAAGTTC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTAATTCATCGCCATTTTTGCCTATAAGTCCATAAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCTTCGAAGCTACTAAAGGTGGCCGTGCAGTAGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGATAAGGCTATTGCAAGAGTAGCGAATGTGCTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAATATTTCAGAAGCTATTGCGGATATATTTACTGTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGAATTCCTGCAATGTGGCAGGCTTTTCTCAACCTAGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTGTGATTTCAGCCAATTTATCGCATTTTCAATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATACAGTTCGGTGTTTTCATCTAGTGCTACATTTATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CCAGCAGGTTGAGCGTTAGGCAGGTTTCCCTGCCCG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGGAAGATGCGTTGTTTATGTCAGCAATTTCCGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CAAAATGGCAGGTGGTAAAACCACAGCTAATACATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTTCATCAACATCCATCTCGTCTACATAGAACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAACATATTTTAAAGCAAAAAGCAGAAAATCACTGG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGATTGTAAAGGAATATGTATCCCCAAGCCTTACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TGGATAGTGCAAACATAGATGAAGCCTCCGTAGGCCTT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTATTTCAGCAACAATATATTTGGCAGCCGATGAAT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATTGTATATATCTTTGGAGTAACGTATAATACCC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGATAATGTTCTTTTCAATAGTGCCAAGGTCTAATC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACAGGAACGTGCGTTCTCTGGACGAGGTAACTATCGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGCACACAACAGCAAAAAAACAAAGAAAAAAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GCACCAACTTGTCTTTTTTGATGAGGCTTGCAACAA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATGTGCTGCTGGATGCCCGTACAGTCTTCCACTGTA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TAGATTGCGAAAAGCCTGCCACATTGCAGGTCACAAGGT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTTTTTTCACTTATAGACTTAATTCAGTGTGGC
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTCTCAATGGCTGACTTCGATGCGCCCTGGGCAAGCATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGCTGCTATCTCGGCTATTCTTTCATCTATACTCA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTGCTCTTTATCCGGTGCTCTTATCTCATTCACA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGAGAACGGGAAAGCAATATTGAGAAAACCCTTTG
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGGCGGCATAGCTTCTATTATAGAAAATTCTACT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	TTATATCGAAGAAAAAAGAACAAAAGTGAGGCGATT
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAATTTCGGGAGTGTAGAATTTCAACTCGGCAATAAGA
GTTGAAGTGGTACTTCCAGTAAAACAAGGATTGAAAC	GAATGATTGAATCAATAACCATTATTGCCTGCAATTA
GTTGAAGTGGTACTTCCAGAAACAAGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009012.1\|WP_003511809.1\|3802517_3803192_+\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_009012.1\|WP_020458054.1\|3791467_3793309_+\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
NC_009012.1\|WP_020458056.1\|3800182_3801253_-\|IS30-like-element-ISCth3-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_009012.1\|WP_020458053.1\|3782068_3784711_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NC_009012.1\|WP_003511811.1\|3803184_3804786_+\|CRISPR-associated-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|187831
NC_009012.1\|WP_003511813.1\|3804782_3806114_+\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|187857
NC_009012.1\|WP_003511791.1\|3780375_3780561_+\|YtxH-domain-containing-protein	unknown	unknown	gnl\|CDD\|378938
NC_009012.1\|WP_020458052.1\|3778202_3779564_-\|DUF1015-domain-containing-protein	unknown	unknown	gnl\|CDD\|377633
NC_009012.1\|WP_003511802.1\|3794967_3797370_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NC_009012.1\|WP_020458051.1\|3777694_3778120_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511789.1\|3779816_3780371_+\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|226398
NC_009012.1\|WP_003511793.1\|3780748_3781798_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NC_009012.1\|WP_004464084.1\|3798674_3799898_+\|IS256-like-element-ISCth4-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_009012.1\|WP_003511783.1\|3776836_3777487_-\|YhcN/YlaJ-family-sporulation-lipoprotein	unknown	unknown	gnl\|CDD\|378211
NC_009012.1\|WP_020458050.1\|3775853_3776564_+\|zinc-dependent-phospholipase-C-family-protein	unknown	unknown	gnl\|CDD\|211381
NC_009012.1\|WP_003511778.1\|3775000_3775630_-\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511800.1\|3794240_3794954_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NC_009012.1\|WP_020458055.1\|3797383_3798052_+\|CRISPR-associated-endonuclease-Cas6	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_009012.1\|WP_003511798.1\|3793308_3794226_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NC_009012.1\|WP_003511777.1\|3773636_3774857_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349778

Protein	Function_ID	Function_description	E-value
NC_009012.1\|WP_003511809.1\|3802517_3803192_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	2.08529e-11
NC_009012.1\|WP_020458054.1\|3791467_3793309_+\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	5.1977e-163
NC_009012.1\|WP_020458056.1\|3800182_3801253_-\|IS30-like-element-ISCth3-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.78254e-86
NC_009012.1\|WP_020458053.1\|3782068_3784711_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NC_009012.1\|WP_003511811.1\|3803184_3804786_+\|CRISPR-associated-protein	gnl\|CDD\|187831	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains.	4.81203e-12
NC_009012.1\|WP_003511813.1\|3804782_3806114_+\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	8.1844e-16
NC_009012.1\|WP_003511791.1\|3780375_3780561_+\|YtxH-domain-containing-protein	gnl\|CDD\|378938	pfam12732, YtxH, YtxH-like protein. This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.	0.00250347
NC_009012.1\|WP_020458052.1\|3778202_3779564_-\|DUF1015-domain-containing-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	9.63056e-106
NC_009012.1\|WP_003511802.1\|3794967_3797370_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.88311e-52
NC_009012.1\|WP_003511789.1\|3779816_3780371_+\|PRC-barrel-domain-containing-protein	gnl\|CDD\|226398	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only].	2.90119e-24
NC_009012.1\|WP_003511793.1\|3780748_3781798_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.0462e-48
NC_009012.1\|WP_004464084.1\|3798674_3799898_+\|IS256-like-element-ISCth4-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	2.74786e-122
NC_009012.1\|WP_003511783.1\|3776836_3777487_-\|YhcN/YlaJ-family-sporulation-lipoprotein	gnl\|CDD\|378211	pfam09580, Spore_YhcN_YlaJ, Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ). This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.	5.26069e-25
NC_009012.1\|WP_020458050.1\|3775853_3776564_+\|zinc-dependent-phospholipase-C-family-protein	gnl\|CDD\|211381	cd11009, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium.	3.21669e-62
NC_009012.1\|WP_003511800.1\|3794240_3794954_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	8.97432e-41
NC_009012.1\|WP_020458055.1\|3797383_3798052_+\|CRISPR-associated-endonuclease-Cas6	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	2.46783e-58
NC_009012.1\|WP_003511798.1\|3793308_3794226_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	2.05797e-95
NC_009012.1\|WP_003511777.1\|3773636_3774857_+\|AAA-family-ATPase	gnl\|CDD\|349778	cd17869, TadZ-like, pilus assembly protein TadZ. Pilus assembly protein TadZ is involved in the production of a variant of type IV pili. It is part of the SIMIBI superfamily which contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	5.58775e-30

>NC_009012.1|WP_020458053.1|3782068_3784711_+|alanine--tRNA-ligase
MEKLGLNELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTCQKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVSIYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHGTGPCGPCSEIYFDRGEDKGCGKPDCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEVDTIRRVLDYICKITGVEYGSSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRRLLRRAARHGKLLGMDRPFLSDVASVVIKESKGAYPELAERAENIKKVIRIEEEKFEETIDQGLVILSKYIEETRKKGEKVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARVLYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLIEAEGARVKVLDCKKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKYGDVVRVVKIGDYSIELCGGTHLNVTSQAGFIKIVSESGVASGVRRIEALTGEAALKHFDEEEKLLRDIAQVLKTNPSDSVKRIESLLNEIKAAQKEIEQLRSKLVSSSLDDVLAKAVEINGVKVVTARFDQFDMEALRNTGDTIRNKLGSGVVVLGTGFGGKVSLVVMATKDVVAKGIHAGNIIKEAAKVAGGGGGGRPDMAQAGGKDVSKIDEALKQAVKVIESQLAG
>NC_009012.1|WP_003511793.1|3780748_3781798_+|AI-2E-family-transporter
MVSARKIFTCIILSLLLVSILYFVVVHRDKIIKIIFPVLLGAVIAYILRPIVLKLESKNISRTKSIIMIYLVFGILLTTAVIFIAPIFVDNTREFINTVPEITTEYGEKFNKILKMIDTSGWSAEVKNAIYNEINNGVNIAENMLMDALRKTLVWLFKSLTGISNIILGMIIAYYIMKDAEFFKKGALSLVPRRWRNEIIGTCREINEILSCFIQGQLLTALIIGIMETVALAIIGVKYSPILGFIGGISNIIPYFGPFIGAIPSVAVALIDSPVKAFWTVVAFLVVQQIDNAFISPKIIEGRLGLHPITTILAVLAGGEFFGIIGMLVAVPVTAVLKVILKRLIEAIV
>NC_009012.1|WP_003511791.1|3780375_3780561_+|YtxH-domain-containing-protein
MMRNNFTRGLIIGSIIGASVGMVMSSDTMMSSRTKRRMRRKGMDLVKKSGALISDMVELFR
>NC_009012.1|WP_003511789.1|3779816_3780371_+|PRC-barrel-domain-containing-protein
MHRYSEVLGLPVICTADGKNLGTIKDIIFCPKEKSVVAFLIECKGYNRRKKVVFASDVLSLGRDALIVNDADDVRDLKKVLHRPEFKDKGDILGLPIYTKNGEDLGTAKDVLFDLKHGKIDGIEVSDGLLQDIVKGRSVLPLIGKVEFGEENILVDNEAVEEMMETGGGIKNLIEGNKKVQRKG
>NC_009012.1|WP_020458052.1|3778202_3779564_-|DUF1015-domain-containing-protein
MIDKKTYNEIGVHIPSILLPKEGIDMQKWSVVACDQYTSEPEYWEEVEKKVGDNPSTLHLIFPEIYLEHGNADERIKRINNEMKRYINEGILVSQKPCMLLVDRSTPHTKSRKGLILAVDLEKYDYSAGSQTLIRATEGTVIERLPPRVKIRENAILELPHVMLLIDDPDKTVIEPLAGKLDSFEKVYDFELMMNGGHIRGYRIDDGETLKGILKAIEALADPEVFKSKYKVGDDKGVLLFAVGDGNHSLASAKVHWENVKKSLSEAEVEDHPARFALVEVVNVHDDGIVFEPIHRVLFNIEPESVLNALQDFFGSSCCSLEKFDSLESVNKRLSELKREEAVHSFGFVTDRSFGVFTVQNLKHNLEVATLQGFLDYYLGKQKEAKVDYIHGEDVVTKLGSKPGNIGFYLPSMEKHDLFKTVILDGVLPRKTFSMGEAEEKRFYLECRKIVKD
>NC_009012.1|WP_020458051.1|3777694_3778120_+|hypothetical-protein
MYGKDCMYSMPHMMNIPAWQQQYHPMAAMPVQQLENMYPRTYYIVYPRVQHYCDMMDMNYGCLYCPTKEELDRMCDKICDEVEADVEAAICEEMKEEADRQLGFGGRRLLRAFVGTLLIRELLTRRRPYGFPGYWYGYYGY
>NC_009012.1|WP_003511783.1|3776836_3777487_-|YhcN/YlaJ-family-sporulation-lipoprotein
MNKNFIKAASLSLGLVVASLSLAGCNMGGGTDQGNRTTRQNTQQLTTPDGNTNRFLNMDMNPGNNNGTNNNLFGRNNGADNNGLLGGNMMGSPAASPGQNTPAPQGNAVMREKATNITSQLAAMPEIKEANALVVGNSCIVAYSPENAQGDANARKNMVINKVKEIDPSITNVIATESRDIMNRITQITNNMNNKSMDQINNEIMQLMNEVAPAAS
>NC_009012.1|WP_020458050.1|3775853_3776564_+|zinc-dependent-phospholipase-C-family-protein
MAGRLERTYGKAFRYLLFALNPFKKAVIKTECMVHKYINIQALEILKNDKYIDAYCLFSDYIDDLNKGVTWADQDLKSANHFYNPDRKKGLYGNNNALSLAVTYYNKALEYWYDLQPNLAMFYLGAAVHLVQDMTVPHHANVRLLDNHRQYENFIKRTYLNTPRFTVDRGGYYLSGIEEYIVCNARNAIKIYSRLKDIKDVSKRFYTITKFTLTLAQRTTAGCFLTFYKDISKRHL
>NC_009012.1|WP_003511778.1|3775000_3775630_-|hypothetical-protein
MDDLIELEISKTQCIRIYLPCKKEDLDFFDCVTIEYLKEQTEYILYYKDLSGAAIISLKELLEKALNFKLQIENEYKDKGIGYYHSIYTNNIYANKLQTAGSQDLIDPTKDFLVWSTLGPTSIGTFIYNDQDKIYIEISPLYEWFNHIFDDILEEYNEVKDEDASFDDFLNNYKPIDIVAIDRKVAEKWLEFCCEMIEILKANDKKQLK
>NC_009012.1|WP_003511777.1|3773636_3774857_+|AAA-family-ATPase
MRRLNLVIADTDEGYVRNVVNHLMTNYLDKLRVSSFTRRELLYDFLSGLNKVDVLLISPDMYSKDLPIDSDTKVFLLTKGEPSSKGAGIDYVDKHQVGDEFVNKLVGMFFEGEVEKKEEPVVMESIAGKNVADEDNTGEDITVEDISGEDTVVEEEPFRDVETKVVAIYSPIGGSGKTTVAVNSAVHCAKKGLEVFYLNLENFQSTPLYFNCKKERNLSELLRCLKQGRNVAAKIRQIKQKDADYGVHYFVPPENVVDLKEMDSDEINVLINAFRSMRFYDIVIVDMSSELDDKNIALLNSADEVIMVLAQDAVSNVKAEYVSEQLEKHLAGHGLNLSGKLTVALNKYNFHMALEVDTVCIDGEVVSVYLPFVPGMTAVKGIAQMADIQGDFGAGIEELMGKYIKL
>NC_009012.1|WP_020458054.1|3791467_3793309_+|TIGR02556-family-CRISPR-associated-protein
MLAGVLQLGQYALNKKSTDTEEYLQVIENPNDKGNYNHVLKIAFESTEGNIVYRGVEYEEFSSKKINNYAYKKGSARGGDVTPTSKYTDSMKTLNKIMISFNDILKSANQNNDEQKIFKGIYEYMVSNQENIANDITEKIKSISLKKGESFIITVTLFDNNTEKYMGNFQLIRNHLARILNEQYYNKYGKTSKGKGICYYCKNEGEVFGFVNTYNSYTVDKIGFVTGGFKQENAWKNYPVCSCCAQKLEQGKKYIRENLTSKFSGFDYFVIPKAVISDEHDEAEFIETLEEFEKNTNFSTQESTKQNLLGSEKDFLEIMKDSKNYLNYNMLVFKEEQSGSVFRILLYIEDIVPSRVKNILRVKDRVDETVLFKNLPGKDNATYDLKFGFDKIRTFFPNNKTEGNFDKSFLEILNNVFTYKKISYKFLLGRMISKIRSDFAREEYVKNLVLQALMCIMFIDKLNLLSGKGKEVQKIMIEKTEKNKKYLDFFENESYKDVFNSDYKRAVFLTGVLTEKLLNIQYKERGSKPFYSRLNGLKLNKNIVKRIYTEAINKLNEYNKNYYKELEYLIGMYMLSEESQKNVSDDEISFYFVLGMSLARFFNEEKKDGEDEE
>NC_009012.1|WP_003511798.1|3793308_3794226_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MIKNRQEILFLYDVTDANPNGDPLDENKPRIDEETGINIVTDVRLKRTIRDYLYDYKGFDGSNGKDIFVREIESEKGGIKDGKARAKDFNENVDEILQKAIDIRLFGGVIPLDKASITFTGPVQFNMGRSLNKVNLKHIKGTGAFASGEGKAQKTFREEYIVPYSIIAFHGIINENAAKRTGLTDEDVDLLDDAMWNGTKNLITRSKMGHMPRLMLRVVYKPGENFFIGDLQNRISLNFDVEEEKIRSIKDFSIKLDELIDELANYGDKIEKVVFVADKNLRLSYKGREINLKDIKDIRFEEKTF
>NC_009012.1|WP_003511800.1|3794240_3794954_+|type-I-B-CRISPR-associated-protein-Cas5
MVEKYLVFDISASYGHFKKPYTTTSPLTYSIPTRTAVSGIIAAVLGFGKEDYQEHFTKPQAKIAIGIRNPVKKVRISENLINTKKSMNIIHERTQIKIEFLKDACYRIYFTHTDKQIYERLKESLKEHRTVYTISMGLSENLANYTFTGEFDGREVKGNKEIVEFSSVVPLDILKKGDIEFEDDREYFTETIPVEMDAERNINEYREVLFERNGCKVRARVDSYIKIEGIDENILII
>NC_009012.1|WP_003511802.1|3794967_3797370_+|CRISPR-associated-helicase/endonuclease-Cas3
MLLSHPGKLLLDHLKNVFLIGDCILMQKKTEFESFSEHDIRQLNKLNLLTHDLGKATSYFQDYIRNLDDNTQKNDERKRHGLLSGVLSFKIVNAVMKNEILAFLSYMVVSKHHGELDDFTNFISVISGDEKNKTLLKLQFESIDKGKLQEVITRLGIDFDILSYTVDEFENDIDYITSRKVRKKVKELMGLEIFLLIDYLFSLLIFSDKLEAIYNSENMNIEEFIEKNTNRPRISSDCVDKFKKSLEIKNIRMAEWRNRAYQDVLGSVENLSLEEKILSINLPTGSGKTLTALKAALRLKERLIEEKGYNPRIIYVLPFTSIIEQNFDVFQKVLGTTESNVLLKHHYLSQRVYQWEKEGEIESLSDTVSEHLVESWDSEIVVSTFVQLLHSIFTNRNRKLKKFHNIVNSIIILDEVQSIPHRYWNLVRETFSAMAKYLNCHFIFMTATMPLIFSEENKEIYELVKDKRKYFEEFSRITIDAKRLTDKTTLDEYKTLLLDDILRYKKDDFLIVMNTIRTSIEIYSFIKEELKDEAEIYYLSTNIIPKERLDRIKKIKESKNRKIIVSTQMIEAGVDIDIDRVYRDFGPMDSINQTAGRCNREWGDKKGLVTLVNLVNENHHSRPYATYIYDNVLIEETKKALSGLEMIEEKEIFHLAEKYYVGLKSHGSDESQKLLDCIKELRYREAFECGKDDKNSGVFELIRQDFNTVDVFIEIDDDATEVWQEYQSIKKIKDRFERKRKFNQFKKDLYMYVLSLPEFAVRKQVDIDEKDITFINREMVFNTYDKDTGFMRDLEKDYFF
>NC_009012.1|WP_020458055.1|3797383_3798052_+|CRISPR-associated-endonuclease-Cas6
MDIKILTVRLEGNRVESRDIPKIRGYLAGRFPQYLELHNHLGENKFNYGYPVIQYKSINGVPNILAINEASKILIDIFYDVKEIDMKDKVMSILEKGYVLKTRELKTTERMIEYRFLSPWLALNQENYEKFINSDSGERVEILKKILTGNILSMAKGLGYCVDKPIEVFVNLRPVQVNYKNRKMIGFKGEFITNFIIPDYLGLGKSVARGFGTVERVGKGFV
>NC_009012.1|WP_004464084.1|3798674_3799898_+|IS256-like-element-ISCth4-family-transposase
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPQIEEWQKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQIMFEGRI
>NC_009012.1|WP_020458056.1|3800182_3801253_-|IS30-like-element-ISCth3-family-transposase
MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVYEKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRLKSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSELKNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEVYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQQWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIA
>NC_009012.1|WP_003511809.1|3802517_3803192_+|hypothetical-protein
MEEYTLKIELLTDAVFGSGNSVPGFVDADVLHDEYGFLYINGKTLKGKLGEMASVFVNILMEIDECREIAEILQKKKEELFGVAEKYSHSKLKFSDCEFSKNIKDYFKCYMKDSDIKPEEILEALTHIETQTSINYVSGVAKKNSLRNYRVINRGIVLYSSVYSPKKLDDEDKILLASACSMLRHLGSNETKGKGEVRVSLWLKEKEVTHEYIRLLEKKVKLNA
>NC_009012.1|WP_003511811.1|3803184_3804786_+|CRISPR-associated-protein
MHKCIQFDIQALEPLKLGKFERDSNNEYSYSYIPGSVVKGAVAWGLVEEKGFVPKEILNGSSIFYNAYPLLDGNPAIPMMQGYMGDKQEIRSNKDNVRVVHSFNRKIENSIPLNNYEFVVKDAENEKLLLGYNPGKIENLHINKKDALNDSSKLKMFRYEAIRKGECFRAYIRVPEEHYDDIVKILSKDYIYFGGSRGSGYGKCRVTGIKEVSAVCLYESDLDIKEDLYIYFLSDAILYYDGKVNTYIPENELKEMLGIEGKCEYVESYSGLGVAASYNTLYRTNTVCYTAVLKGSVIKYRVEGKINPDRIKKLASEGVGLRREDGYGQIAVLGKIQDDMVVSRYRKNDIVEKSDIELTDEDKRVVNMILCNIFKTRSKLQIEKMVIELLKDVNRPQESLQSQIGKLLNIFQNGFYQTEDDFRKYLNEYLEHIRKKKGKAVWHKLYDFTVANTLDKFRSERLSIQKMLEDFVQNKFNSVFREIENIVNKGITLGIYKYPVESQKAQVLHNLKMDFFISFFEYCLRMKEKEVIS
>NC_009012.1|WP_003511813.1|3804782_3806114_+|hypothetical-protein
MIYKNRLLKTIRYNVKATTISPLAIRDDEDNLKIDQLTGKVYIPGSSVAGAFRNYYENYIDKNSNENFNELFGGQKTGMSQIVFYDGYLVNDYVKEMISSRPGIKMDLKRMTVEVSDDAKKSGKKFKRRFLNEGLTFEFVFELNNYEDDAGKFEEKQRKFEELLKAFSIGDISLGSNKMIGYGRFRVDSISKSVFDFTNINDLLKYMLMETDSTEITQDILGREQETSKVRFKIKGKTVTPLLVKDETVRLSNESDGINIKDSRGNYIIPGSSIKGVIRSRAERLHRTFPCIGEEILTNIFGIESKKDDDGHISRLSCFDAVVKNPNKGIYNKIKIDYFTGGVMQGALMNDEVVMGDVEIECTFNTSGLNDYKREIGLLLLVLRDLCKEDLSIGSGYAVGRGYIKAETLELYDGEKLVLDFKSPNREVLKRFDSYISSLMNVG

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Crispr_ID: NC_009012_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_009012_5

3813209-3816348

Unclear

Consensus_repeat	Method
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	PILER-CR
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CRISPRCasFinder
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CRT

42 spacers

csx1,csm3gr7,csx19,csx10gr5,cas6,cas1,cas2,cas4

The CRISPR arrays of NC_009012_5

>merge|NC_009012|5|3813209-3816348|PILER-CR,CRISPRCasFinder,CRT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCTTTTTTTATCTCGTTATCTTCACCGTCTGTGTATCGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATTTCTCATATTCAATTTTTACCTTTTCCATTTTTTAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATCTTGGGGTGCAAGAGGTCGCTGGTTCAAATCCAGTCACGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATGGGCATGCTCATATGGTGTATCCCTCAACGCTATAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCTATCTGTTGCGATTCTCCGCCACTGGGATTATCACCGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATTCACAAAATCAGCACTCAAGATGGGAAGTGACTTGGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATCATACTACCCATAAAACCTTCTAATTGCTTTAGCGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTTTCCTTACAATTGTTAAACATCCAAATATCGTCATGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCGCACATTTCTATCCCTATACTGTTGCGGTTGGTAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTATGTATCATAATGCACGTGGCACTAACTGTAAGACTTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACACGACAACATGAGAAGAAAAGGGGATGAAGCACAGAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTCTTCTCTTAAAGCACTACCAGTATCTTCTACTATTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTGTATGTATTTTATTAATATAGTGTGCTTGTAATTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGGATTTGTCAAGTCTGCTAAAATAGCGGGCGGCAAAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCCTTCTCCCCATTTACCACCGGGCAAATTAACTGTAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGTTAATCCCAAATTATGCTCAAAAGAAAAAAACCAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAATATTGGAATCCAAAATAACCTTCAATTTTCCACCAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGTGACGTTTTGGCGTCTATTGAAAATCTAGGATATGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTTCACATGCATAATATGTGAAATAGCGACCGAACAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAACCTCCTTTTTATATTTCTGGATCATCATCATAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCAGTATTGCATTGTTATTCCTCGCTTTCTTTTTGTTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATACACTTCAAGAGAATAATGTCCAGTTCGTGTCGGGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATGGTGATGAAGTGAGGTATGAAGCTGGAAGCGGAGAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTTTATAGTAGATTAAGTTTTCTGCGTTAAAATAATGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATTGTCTTGAACTCAGGGTCTATATACCGCACCAAGCAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCTTCGGATAATCCGTCTTCTCGTTTAATTCTTAAGCCAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACACATATACGAAGGTTTAAACAGGACAGCAGAGCAAAGGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGACTACATTCTTTTAATTTTTAAAAAAGAAATATTAAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAATCTTCTGCGAGCAGAAGGAGTTCGTTTCTGTTGCAACGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCCCAAAGAAAGCGCATGATAGGGTCTTTAGGTGGCTTCGGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATATTACAGTAACAACTAAAGCAGGACATAAAAGTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTACATGATATTACCTCCTATTTTTATTTTTCTTCCAGGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAGCATCCCTACTTAAAGAGACTGGGGGCATATAACCCCGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTCAATCGTGGCCTCCAGGGAACGGGCGTAAAACAGTTCTTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACATAGAAGGGGCTTAAGCCCTTTTTATTCTGACCTGAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAGGAAGCAGAGGATTACGTACGTCAGAAAACAGACTTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACTTTTGTCAAGCCATTGATACATCCTTTAATGTCTAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGTATAGCACAGGCCCAAGTAAAAGAAAGGAGTTCATCAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACCTACAGCTATAGCTTGCTTGAATACAAACTCAACGAGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACGTCCCTCCTTATGCTTCAACATTGATTGCTACGCCTGTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAACAACCTTACTATGATGTTATAACATACAAAGGTTGTAAAGTTGAAGAGGTATTTCCAGTAAAACAAGGATTGAAACCTCAAACTCAGTGATACTAAGTATTTTAAAAGAAAAGTTGAAGAGGTACTTCCAGTAAAACAAGGATAAAAAC

>NC_009012|5|5|3813209-3816275|PILER-CR
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTTTTTATCTCGTTATCTTCACCGTCTGTGTATC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTTCTCATATTCAATTTTTACCTTTTCCATTTTTTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTTGGGGTGCAAGAGGTCGCTGGTTCAAATCCAGTCAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGGCATGCTCATATGGTGTATCCCTCAACGCTATA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATCTGTTGCGATTCTCCGCCACTGGGATTATCACC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTCACAAAATCAGCACTCAAGATGGGAAGTGACTTG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATACTACCCATAAAACCTTCTAATTGCTTTAGC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTCCTTACAATTGTTAAACATCCAAATATCGTCAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CGCACATTTCTATCCCTATACTGTTGCGGTTGGTAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TATGTATCATAATGCACGTGGCACTAACTGTAAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGACAACATGAGAAGAAAAGGGGATGAAGCACAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTTCTCTTAAAGCACTACCAGTATCTTCTACTATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTATGTATTTTATTAATATAGTGTGCTTGTAATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GGATTTGTCAAGTCTGCTAAAATAGCGGGCGGCAAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCTTCTCCCCATTTACCACCGGGCAAATTAACTGTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTAATCCCAAATTATGCTCAAAAGAAAAAAACCAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATATTGGAATCCAAAATAACCTTCAATTTTCCACCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGACGTTTTGGCGTCTATTGAAAATCTAGGATAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTCACATGCATAATATGTGAAATAGCGACCGAACA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTCCTTTTTATATTTCTGGATCATCATCATAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CAGTATTGCATTGTTATTCCTCGCTTTCTTTTTGTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATACACTTCAAGAGAATAATGTCCAGTTCGTGTCGG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGTGATGAAGTGAGGTATGAAGCTGGAAGCGGAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTATAGTAGATTAAGTTTTCTGCGTTAAAATAAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTGTCTTGAACTCAGGGTCTATATACCGCACCAAGCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCGGATAATCCGTCTTCTCGTTTAATTCTTAAGCCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATATACGAAGGTTTAAACAGGACAGCAGAGCAAAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GACTACATTCTTTTAATTTTTAAAAAAGAAATATTAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATCTTCTGCGAGCAGAAGGAGTTCGTTTCTGTTGCAAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCAAAGAAAGCGCATGATAGGGTCTTTAGGTGGCTTCG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTACAGTAACAACTAAAGCAGGACATAAAAGT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TACATGATATTACCTCCTATTTTTATTTTTCTTCCAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGCATCCCTACTTAAAGAGACTGGGGGCATATAACCCC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTCAATCGTGGCCTCCAGGGAACGGGCGTAAAACAGTTCTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGAAGGGGCTTAAGCCCTTTTTATTCTGACCTGAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGGAAGCAGAGGATTACGTACGTCAGAAAACAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTGTCAAGCCATTGATACATCCTTTAATGTCTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTATAGCACAGGCCCAAGTAAAAGAAAGGAGTTCATCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTACAGCTATAGCTTGCTTGAATACAAACTCAACGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTCCTTATGCTTCAACATTGATTGCTACGCCT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTTACTATGATGTTATAACATACAAAGGTTGTAAA
GTTGAAGAGGTATTTCCAGTAAAACAAGGATTGAAAC

>NC_009012|5|5|3813209-3816348|CRISPRCasFinder
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTTTTTATCTCGTTATCTTCACCGTCTGTGTATC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTTCTCATATTCAATTTTTACCTTTTCCATTTTTTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTTGGGGTGCAAGAGGTCGCTGGTTCAAATCCAGTCAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGGCATGCTCATATGGTGTATCCCTCAACGCTATA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATCTGTTGCGATTCTCCGCCACTGGGATTATCACC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTCACAAAATCAGCACTCAAGATGGGAAGTGACTTG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATACTACCCATAAAACCTTCTAATTGCTTTAGC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTCCTTACAATTGTTAAACATCCAAATATCGTCAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CGCACATTTCTATCCCTATACTGTTGCGGTTGGTAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TATGTATCATAATGCACGTGGCACTAACTGTAAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGACAACATGAGAAGAAAAGGGGATGAAGCACAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTTCTCTTAAAGCACTACCAGTATCTTCTACTATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTATGTATTTTATTAATATAGTGTGCTTGTAATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GGATTTGTCAAGTCTGCTAAAATAGCGGGCGGCAAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCTTCTCCCCATTTACCACCGGGCAAATTAACTGTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTAATCCCAAATTATGCTCAAAAGAAAAAAACCAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATATTGGAATCCAAAATAACCTTCAATTTTCCACCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGACGTTTTGGCGTCTATTGAAAATCTAGGATAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTCACATGCATAATATGTGAAATAGCGACCGAACA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTCCTTTTTATATTTCTGGATCATCATCATAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CAGTATTGCATTGTTATTCCTCGCTTTCTTTTTGTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATACACTTCAAGAGAATAATGTCCAGTTCGTGTCGG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGTGATGAAGTGAGGTATGAAGCTGGAAGCGGAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTATAGTAGATTAAGTTTTCTGCGTTAAAATAAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTGTCTTGAACTCAGGGTCTATATACCGCACCAAGCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCGGATAATCCGTCTTCTCGTTTAATTCTTAAGCCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATATACGAAGGTTTAAACAGGACAGCAGAGCAAAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GACTACATTCTTTTAATTTTTAAAAAAGAAATATTAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATCTTCTGCGAGCAGAAGGAGTTCGTTTCTGTTGCAAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCAAAGAAAGCGCATGATAGGGTCTTTAGGTGGCTTCG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTACAGTAACAACTAAAGCAGGACATAAAAGT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TACATGATATTACCTCCTATTTTTATTTTTCTTCCAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGCATCCCTACTTAAAGAGACTGGGGGCATATAACCCC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTCAATCGTGGCCTCCAGGGAACGGGCGTAAAACAGTTCTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGAAGGGGCTTAAGCCCTTTTTATTCTGACCTGAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGGAAGCAGAGGATTACGTACGTCAGAAAACAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTGTCAAGCCATTGATACATCCTTTAATGTCTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTATAGCACAGGCCCAAGTAAAAGAAAGGAGTTCATCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTACAGCTATAGCTTGCTTGAATACAAACTCAACGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTCCTTATGCTTCAACATTGATTGCTACGCCT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTTACTATGATGTTATAACATACAAAGGTTGTAAA
GTTGAAGAGGTATTTCCAGTAAAACAAGGATTGAAAC	CTCAAACTCAGTGATACTAAGTATTTTAAAAGAAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATAAAAAC

>NC_009012|5|5|3813209-3816348|CRT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTTTTTTATCTCGTTATCTTCACCGTCTGTGTATC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTTCTCATATTCAATTTTTACCTTTTCCATTTTTTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCTTGGGGTGCAAGAGGTCGCTGGTTCAAATCCAGTCAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGGCATGCTCATATGGTGTATCCCTCAACGCTATA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTATCTGTTGCGATTCTCCGCCACTGGGATTATCACC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTCACAAAATCAGCACTCAAGATGGGAAGTGACTTG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATCATACTACCCATAAAACCTTCTAATTGCTTTAGC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTCCTTACAATTGTTAAACATCCAAATATCGTCAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CGCACATTTCTATCCCTATACTGTTGCGGTTGGTAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TATGTATCATAATGCACGTGGCACTAACTGTAAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACGACAACATGAGAAGAAAAGGGGATGAAGCACAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TCTTCTCTTAAAGCACTACCAGTATCTTCTACTATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTGTATGTATTTTATTAATATAGTGTGCTTGTAATT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GGATTTGTCAAGTCTGCTAAAATAGCGGGCGGCAAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCTTCTCCCCATTTACCACCGGGCAAATTAACTGTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTTAATCCCAAATTATGCTCAAAAGAAAAAAACCAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATATTGGAATCCAAAATAACCTTCAATTTTCCACCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTGACGTTTTGGCGTCTATTGAAAATCTAGGATAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTCACATGCATAATATGTGAAATAGCGACCGAACA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTCCTTTTTATATTTCTGGATCATCATCATAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CAGTATTGCATTGTTATTCCTCGCTTTCTTTTTGTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATACACTTCAAGAGAATAATGTCCAGTTCGTGTCGG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATGGTGATGAAGTGAGGTATGAAGCTGGAAGCGGAGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTATAGTAGATTAAGTTTTCTGCGTTAAAATAAT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATTGTCTTGAACTCAGGGTCTATATACCGCACCAAGCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTTCGGATAATCCGTCTTCTCGTTTAATTCTTAAGCCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ACATATACGAAGGTTTAAACAGGACAGCAGAGCAAAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GACTACATTCTTTTAATTTTTAAAAAAGAAATATTAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AATCTTCTGCGAGCAGAAGGAGTTCGTTTCTGTTGCAAC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CCCAAAGAAAGCGCATGATAGGGTCTTTAGGTGGCTTCG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATATTACAGTAACAACTAAAGCAGGACATAAAAGT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TACATGATATTACCTCCTATTTTTATTTTTCTTCCAG
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGCATCCCTACTTAAAGAGACTGGGGGCATATAACCCC
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTCAATCGTGGCCTCCAGGGAACGGGCGTAAAACAGTTCTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	ATAGAAGGGGCTTAAGCCCTTTTTATTCTGACCTGAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AGGAAGCAGAGGATTACGTACGTCAGAAAACAGACTT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	TTTTGTCAAGCCATTGATACATCCTTTAATGTCTA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTATAGCACAGGCCCAAGTAAAAGAAAGGAGTTCATCA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	CTACAGCTATAGCTTGCTTGAATACAAACTCAACGA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	GTCCCTCCTTATGCTTCAACATTGATTGCTACGCCT
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC	AACCTTACTATGATGTTATAACATACAAAGGTTGTAAA
GTTGAAGAGGTATTTCCAGTAAAACAAGGATTGAAAC	CTCAAACTCAGTGATACTAAGTATTTTAAAAGAAAA
GTTGAAGAGGTACTTCCAGTAAAACAAGGATAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_009012.1\|WP_003511809.1\|3802517_3803192_+\|hypothetical-protein	csm3gr7	mkCas0198_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|377130
NC_009012.1\|WP_003511822.1\|3808629_3809880_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
NC_009012.1\|WP_020458056.1\|3800182_3801253_-\|IS30-like-element-ISCth3-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_009012.1\|WP_003511830.1\|3816439_3817435_+\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NC_009012.1\|WP_003511811.1\|3803184_3804786_+\|CRISPR-associated-protein	csx10gr5	cls000715_csx10gr5_CAS-III-D	gnl\|CDD\|187831
NC_009012.1\|WP_003519516.1\|3818695_3818836_-\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511813.1\|3804782_3806114_+\|hypothetical-protein	csm3gr7	cd09726_csm3gr7_CAS-III-D	gnl\|CDD\|187857
NC_009012.1\|WP_020458060.1\|3820448_3821249_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511818.1\|3806500_3808486_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	csm3gr7	cls000253_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|274902
NC_009012.1\|WP_020458059.1\|3819664_3820312_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511815.1\|3806120_3806486_+\|hypothetical-protein	csx19	mkCas0124_csx19_CAS-III-D	gnl\|CDD\|274900
NC_009012.1\|WP_003511856.1\|3823878_3824391_+\|DUF5104-domain-containing-protein	unknown	unknown	gnl\|CDD\|379921
NC_009012.1\|WP_004464084.1\|3798674_3799898_+\|IS256-like-element-ISCth4-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_009012.1\|WP_003511836.1\|3817693_3818308_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NC_009012.1\|WP_003511843.1\|3821296_3821794_+\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511844.1\|3822303_3823164_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NC_009012.1\|WP_020458055.1\|3797383_3798052_+\|CRISPR-associated-endonuclease-Cas6	cas6	cls000004_cas6_CAS-I:CAS-III	gnl\|CDD\|379957
NC_009012.1\|WP_020458057.1\|3810125_3811349_+\|IS256-like-element-ISCth4-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_009012.1\|WP_003511839.1\|3818366_3818585_-\|hypothetical-protein	unknown	unknown	unknown
NC_009012.1\|WP_003511834.1\|3817428_3817719_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856

Protein	Function_ID	Function_description	E-value
NC_009012.1\|WP_003511809.1\|3802517_3803192_+\|hypothetical-protein	gnl\|CDD\|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	2.08529e-11
NC_009012.1\|WP_003511822.1\|3808629_3809880_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	3.34196e-69
NC_009012.1\|WP_020458056.1\|3800182_3801253_-\|IS30-like-element-ISCth3-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.78254e-86
NC_009012.1\|WP_003511830.1\|3816439_3817435_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	8.93318e-96
NC_009012.1\|WP_003511811.1\|3803184_3804786_+\|CRISPR-associated-protein	gnl\|CDD\|187831	cd09700, Csx10, CRISPR/Cas system-associated RAMP superfamily protein Csx10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains.	4.81203e-12
NC_009012.1\|WP_003511856.1\|3823878_3824391_+\|DUF5104-domain-containing-protein	gnl\|CDD\|379921	pfam17117, DUF5104, Domain of unknown function (DUF5104). This is a family of gut microbes of unknown function.	1.68066e-38
NC_009012.1\|WP_003511813.1\|3804782_3806114_+\|hypothetical-protein	gnl\|CDD\|187857	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily proteins.	8.1844e-16
NC_009012.1\|WP_003511818.1\|3806500_3808486_+\|TIGR03986-family-CRISPR-associated-RAMP-protein	gnl\|CDD\|274902	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein. Members of this protein family, part of the larger RAMP family, are found exclusively in species with CRISPR systems, in local contexts containing other RAMP (Repeat-Associated Mystery Proteins).	2.13318e-147
NC_009012.1\|WP_003511815.1\|3806120_3806486_+\|hypothetical-protein	gnl\|CDD\|274900	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family. Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).	0.00348704
NC_009012.1\|WP_004464084.1\|3798674_3799898_+\|IS256-like-element-ISCth4-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	2.74786e-122
NC_009012.1\|WP_003511836.1\|3817693_3818308_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	2.36773e-32
NC_009012.1\|WP_003511844.1\|3822303_3823164_+\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	4.04252e-05
NC_009012.1\|WP_020458055.1\|3797383_3798052_+\|CRISPR-associated-endonuclease-Cas6	gnl\|CDD\|379957	pfam17262, DUF5328, Family of unknown function (DUF5328). This family of unknown function can be found in Bacteria and Archaea. Some of the proteins in this family are annotated in UniProt as putative DNA repair proteins.	2.46783e-58
NC_009012.1\|WP_020458057.1\|3810125_3811349_+\|IS256-like-element-ISCth4-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	3.12564e-122
NC_009012.1\|WP_003511834.1\|3817428_3817719_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.78723e-22

>NC_009012.1|WP_020458057.1|3810125_3811349_+|IS256-like-element-ISCth4-family-transposase
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPEIEEWQKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLKDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQIMFEGRI
>NC_009012.1|WP_003511822.1|3808629_3809880_+|TIGR02221-family-CRISPR-associated-protein
MAKKLFAFLGIGDYKSVEYYFQNKKEGYKTEYIQEAITKLLNEQDLNVTVFVTAEARKKHWEPENNKGLESRLKKLNINCKAVNIPDGKANDDVWKIFTSVYSEIEFNDEIYVDVTHSLRNIPIIFMSVLNYAKVTKNCTIKGIFYGAYEAKENERAPIYDLTLFDQIGEWSSGVEQLLTTGECEMFCSTVEKTLDPLLREAKGKDELIKLVKKCSKLIKEFYTDLKLVRGKSVLEDGRKLYQVLCEIKALNTEKHITMQPFFHILERVENQVAFFQNENLIENILECVKLCKKFGQYQQAYTFLRENIINYVCINTGLDWKKEDPDRLKAEELIGKLYMRKIKKVQIEVSEDIKSILENGEDFICDDAIELFGELIEFRNDLDHAQFRMINPSKDKITCKLDSFIERFEKYYISK
>NC_009012.1|WP_003511818.1|3806500_3808486_+|TIGR03986-family-CRISPR-associated-RAMP-protein
MGNNENVVYKSKAPYNFIGLEDFILDKCSDEEELLMHERYHEGLKTGCIQYEIEVITPLHISAGKKESGKEKEDSEEESTREEELFKNPLGQYVIPGNTIRGLTRYNASIFSFASVINEPKGKKDIENKRFFYRTFASKDANIRKWYSDTLGMRLRQRGSFKYTVLEKVHAGYIRKRGEEYVITPAVKIGNKNVDDESRMKSYMPIHEWELRNLNVQGVYYLYNDNLKKEDYKSDSTLRENRNSQYRPYFIEVRYNVAEGKPKIDINGKFKGMLANSNYINSKRHHYLIFEEDKNSAEIVVSKKLAELYTDDLKYTQERNAASKEIYKEYYELPKEGEVKPVFFVKEGDRLIFGFTPYLRIPAEGDIYGGIPEVHKNYTGTDFVDAMFGWRDFRTKLSFLDAVCESPNPEITKEYEMMLAEPKPSWYKGYLKQRKDTLESYSTEGYEIRGRKFYWMKESLDIKGMEEQEKKERLVTRMKCYAENTKFIGKVKFENLTDEELGLLIYSLKQGDTEGYFNLGKGKPYGFGKCRIRILGLFVENIKEKYTSFNANYLKEEKSDKYVEAFRKYIIEHYRKKVSNVNEIISYREFELSKKILKNSETRYMKVGEFAQRAELPMLEDAVRETGNVISTKMKGAEKKNSNHKVKSDKRKNHNESNKTT
>NC_009012.1|WP_003511815.1|3806120_3806486_+|hypothetical-protein
MKIEKIKSGDIASLIKDFDNRIIYYFDNLKFGKGQIELDTDNVNEAFFFEEGKCLHIYREDGIKGILYIEEPEDKEFISEEQILEERILKEPLKVLVVKKYIEYDEDGQAYISRTLPAKFI
>NC_009012.1|WP_003511813.1|3804782_3806114_+|hypothetical-protein
MIYKNRLLKTIRYNVKATTISPLAIRDDEDNLKIDQLTGKVYIPGSSVAGAFRNYYENYIDKNSNENFNELFGGQKTGMSQIVFYDGYLVNDYVKEMISSRPGIKMDLKRMTVEVSDDAKKSGKKFKRRFLNEGLTFEFVFELNNYEDDAGKFEEKQRKFEELLKAFSIGDISLGSNKMIGYGRFRVDSISKSVFDFTNINDLLKYMLMETDSTEITQDILGREQETSKVRFKIKGKTVTPLLVKDETVRLSNESDGINIKDSRGNYIIPGSSIKGVIRSRAERLHRTFPCIGEEILTNIFGIESKKDDDGHISRLSCFDAVVKNPNKGIYNKIKIDYFTGGVMQGALMNDEVVMGDVEIECTFNTSGLNDYKREIGLLLLVLRDLCKEDLSIGSGYAVGRGYIKAETLELYDGEKLVLDFKSPNREVLKRFDSYISSLMNVG
>NC_009012.1|WP_003511811.1|3803184_3804786_+|CRISPR-associated-protein
MHKCIQFDIQALEPLKLGKFERDSNNEYSYSYIPGSVVKGAVAWGLVEEKGFVPKEILNGSSIFYNAYPLLDGNPAIPMMQGYMGDKQEIRSNKDNVRVVHSFNRKIENSIPLNNYEFVVKDAENEKLLLGYNPGKIENLHINKKDALNDSSKLKMFRYEAIRKGECFRAYIRVPEEHYDDIVKILSKDYIYFGGSRGSGYGKCRVTGIKEVSAVCLYESDLDIKEDLYIYFLSDAILYYDGKVNTYIPENELKEMLGIEGKCEYVESYSGLGVAASYNTLYRTNTVCYTAVLKGSVIKYRVEGKINPDRIKKLASEGVGLRREDGYGQIAVLGKIQDDMVVSRYRKNDIVEKSDIELTDEDKRVVNMILCNIFKTRSKLQIEKMVIELLKDVNRPQESLQSQIGKLLNIFQNGFYQTEDDFRKYLNEYLEHIRKKKGKAVWHKLYDFTVANTLDKFRSERLSIQKMLEDFVQNKFNSVFREIENIVNKGITLGIYKYPVESQKAQVLHNLKMDFFISFFEYCLRMKEKEVIS
>NC_009012.1|WP_003511809.1|3802517_3803192_+|hypothetical-protein
MEEYTLKIELLTDAVFGSGNSVPGFVDADVLHDEYGFLYINGKTLKGKLGEMASVFVNILMEIDECREIAEILQKKKEELFGVAEKYSHSKLKFSDCEFSKNIKDYFKCYMKDSDIKPEEILEALTHIETQTSINYVSGVAKKNSLRNYRVINRGIVLYSSVYSPKKLDDEDKILLASACSMLRHLGSNETKGKGEVRVSLWLKEKEVTHEYIRLLEKKVKLNA
>NC_009012.1|WP_020458056.1|3800182_3801253_-|IS30-like-element-ISCth3-family-transposase
MAVQYKSTTTEHKFKHLSVYERGQIAALLKEGKSQRYIANKLGRSPSTISREIKRGTTMQMRTDLSTYKVYFPETGQAVYEKNRMNCGAKRKLAQVEDFLKFAEDKILREKWSPDAVVGLCRRDPKWQNSTIVCTKTLYNYIDLGLIKVRNIDLNLKLRLKSKIKRIRQNKRVVGKSIDQRPEEVQSRQTFGHWEIDTVTGKKSNDSVILTLTERKTRYELLFLLDAKDSNTVNEALSELKNCYGKDVSNVFRTITADNGSEFSRLSEMLQGLGIEVYFTHPYSSWERGTNERHNGLIRRFIPKGKAIKDFSEETIKRIQQWLNSLPRRILGYKTPEECFNEEIHNLVNKNISAIA
>NC_009012.1|WP_004464084.1|3798674_3799898_+|IS256-like-element-ISCth4-family-transposase
MARKRIITPEKKELIRNLISEYNITSAKDLQEALKDLLGDTIQNMLEAELDEHLGYEKYESTEEAKSNYRNGYTSKTLKSSVGQVEIDIPRDRNAEFEPKIVPRYKRDISEIENKIIAMYARGMSTREINEQIQEIYGFEVSAEMVSKITDKILPQIEEWQKRPLGEVYPIVFIDAIHFSVKNDGIVGKKAVYIVLAIDIEGQKDVIGIYVGENESSKFWLSVLNDLKNRGVKDILILCADALSGIKDAINAAFPNTEYQRCIVHQIRNTLKYVSDKDRKEFARDLKRIYTAPNEKAGYDQMLEVSEKWEKKYPAAMKSWKSNWDVICPFFKYSEELRKIMYTTNTIESLNSSYRRINKSRTVFPGDQSLLKSIYLATVKITSKWTMRYKNWGLILGQLQIMFEGRI
>NC_009012.1|WP_020458055.1|3797383_3798052_+|CRISPR-associated-endonuclease-Cas6
MDIKILTVRLEGNRVESRDIPKIRGYLAGRFPQYLELHNHLGENKFNYGYPVIQYKSINGVPNILAINEASKILIDIFYDVKEIDMKDKVMSILEKGYVLKTRELKTTERMIEYRFLSPWLALNQENYEKFINSDSGERVEILKKILTGNILSMAKGLGYCVDKPIEVFVNLRPVQVNYKNRKMIGFKGEFITNFIIPDYLGLGKSVARGFGTVERVGKGFV
>NC_009012.1|WP_003511830.1|3816439_3817435_+|CRISPR-associated-endonuclease-Cas1
MKLILNTPGLYLCKRGECFQIQSENEKREIAATKVDQIMITTHAALTTDAIELALEYNIDIIFLKNTGQPMGRVWHSKLGSISTIRRKQLFLQDSPLGLQLVKEWILEKMDNQIRLLKKLEVNRRDDEKRAIIRDTIEKIEKQKANIMSINNKETVNNVRNMLLGYEGTAGRVYFETLGKLIPEKYAFEARSRNPAKDPFNCMLNYSYGILYSSVEKACIIAGLDPYIGIMHTDNYNKKALVYDMVEMYRGYMDEIVFRLFSTKKVQDDFFDKIEDGYYLNKEGKQLLISEYNKELEVKMNYRGRRIEFANIIQYDCHQIANRILKEDIPC
>NC_009012.1|WP_003511834.1|3817428_3817719_+|CRISPR-associated-endonuclease-Cas2
MLTWVIYDIASNKTRNNIIKKCKNAGLYRVQKSVFLGDIESNKFDELKLELDSIIDKDNDSVYMFTMTKAELNKAGLLGQAFDKELVTDEIISKFF
>NC_009012.1|WP_003511836.1|3817693_3818308_+|CRISPR-associated-protein-Cas4
MKSSQSFFNENQYYITPSDMIEFLYCKRYIYYMKCLGIDQNVEKRFKVMIGREIHEKRGEQNKNYLPKKIGSIHKMIGVNLVSEKYGIKGNADEVHTLADGTMAPLDYKFARYDERLFKTYKNQLVMYAIMIEETFGRKVNKGFLVYCREGNRLVEVCVTEEDKDKLCRCIEEYKMVLDGYYPEATKQKSKCLDCCYKNICIKI
>NC_009012.1|WP_003511839.1|3818366_3818585_-|hypothetical-protein
MWKVVQENYGSVLGCKTIEASLVYDNKMYYRLYTAYDADSKNLKPKVFKPGMLVNVIKQEQYNFTFRYYYGS
>NC_009012.1|WP_003519516.1|3818695_3818836_-|hypothetical-protein
MNKVNEAIECYKPGIKNNPKELSFYMSLSDLLLYAGNVSEAMECLN
>NC_009012.1|WP_020458059.1|3819664_3820312_+|hypothetical-protein
MKRKIFLLFMSLIMLLNVGIGNVYADETGKNALNFRKIYKEHRTYSSAVGISANSLGDIAIGFNDDYINVYDKQGSFKYSFAFEVNGNYFFEFDNENNIVIFSVTDGMRYYFNNDAELIKTEKISDPKELKNYYKNRPDKENVNIDGVNYSLKQVLGYIKFAKTDADGNESVIYETGLQYAVKAFVALTVLAFLAIVICGFIKTISTEMKKYTEV
>NC_009012.1|WP_020458060.1|3820448_3821249_+|hypothetical-protein
MPSLDWNSDRYKNIGKDETCNNEDIVKTSLTNTDFLKIVDDGKVYYGGNQNWFQKYTQSFGGCGPTAAANILAYMAMTDPKFAKLYEYDLKNITKADFVKFMEEVYKYVTPLEVPVFSHMSDKKGKQAGIPSLGITGLAAFAKGVEKFAKSRGIKLKAKWSGEKPTFDNAVSYIREGLRKNRPVALLNMFNPVSMQWSDPETSKIKSMTYERHWVTITGMIENRKTGEVTLEVSTWGGKATLSFNELYNNMDWNEMIFPAGIIYFE
>NC_009012.1|WP_003511843.1|3821296_3821794_+|hypothetical-protein
MKNGKKVAWILVSVCFLSMIALVIIYVNSSPPVEGWKDFKKNSIRNYSFVDDVNLDRITPVDFRISYTLNRKITQEEVDSVFSWTTKYIQSEKVFSDLKKYHAKRYRYSFARLAIVFTYRDNNEHFECNIFSSPVSNGEPNYADYKTWYIEYNGKSSEVYNPMLK
>NC_009012.1|WP_003511844.1|3822303_3823164_+|hypothetical-protein
MNKRLILFIISMLCFTTLTGCGIDRRELVGDIIIGNGYTGIADYLIKYNPAANEFESVVPGFYYEVEYNEDKSKILCYKSLRYSEILNSEICEYDIKSNEFSEAIFNWSEYPDEFEGNVKYVPNSDSISFILGDALHIYDRSSGTLTKLFKVAFDWYSWDNTGKKLLYGDYDENIYMYDMESKEEKKILEGRHPVYSNSNEYIAYMGKDQKLTVYNVNTGENWRTVTIGSSTRYIFSPDDKYILLGTEYWDIVSIPHYIIYALDYKTGKKKRLFGGEGNVPSLDWK
>NC_009012.1|WP_003511856.1|3823878_3824391_+|DUF5104-domain-containing-protein
MIKKIVLLILLTNSFMLTSCLYRGGPVYVGEERAAKKRIKEILAAIENKDKEAMKALFSKKALAEVNDFDEGVDYLFDFFQGDVQSWEIDAWSSGESIERGKKSIMLRVWYIVTTDKEKYMFFVIDYIKDTMNPDNAGLYTLRVIKAEDEETEFGYWQDMVIPGIYKPEQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	MN871480	UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome	29655-29690	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	MT133560	Pseudomonas phage fnug, complete genome	254740-254775	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	DI373487	KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof	53100-53135	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	61553-61588	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	NC_042081	Pseudomonas phage SL2, complete genome	31437-31472	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	KU521356	Pseudomonas phage KTN4, complete genome	255290-255325	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	MW057919	Pseudomonas phage vB_PaeM_kmuB, complete genome	254129-254164	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	NC_042060	Pseudomonas phage PA7, partial genome	53100-53135	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	AP019418	Pseudomonas phage PA02 DNA, nearly complete genome	248790-248825	6	0.833
NC_009012_3	3.44\|2732680\|36\|NC_009012\|CRISPRCasFinder	2732680-2732715	36	NC_004629	Pseudomonas phage phiKZ, complete genome	255110-255145	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	MN871480	UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome	29655-29690	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	MT133560	Pseudomonas phage fnug, complete genome	254740-254775	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	DI373487	KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof	53100-53135	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	61553-61588	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	NC_042081	Pseudomonas phage SL2, complete genome	31437-31472	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	KU521356	Pseudomonas phage KTN4, complete genome	255290-255325	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	MW057919	Pseudomonas phage vB_PaeM_kmuB, complete genome	254129-254164	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	NC_042060	Pseudomonas phage PA7, partial genome	53100-53135	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	AP019418	Pseudomonas phage PA02 DNA, nearly complete genome	248790-248825	6	0.833
NC_009012_3	3.337\|2732681\|36\|NC_009012\|PILER-CR	2732681-2732716	36	NC_004629	Pseudomonas phage phiKZ, complete genome	255110-255145	6	0.833
NC_009012_4	4.67\|3790103\|35\|NC_009012\|CRISPRCasFinder,CRT,PILER-CR	3790103-3790137	35	NZ_CP017832	Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence	4799-4833	6	0.829
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	MT133560	Pseudomonas phage fnug, complete genome	254740-254776	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	KU521356	Pseudomonas phage KTN4, complete genome	255290-255326	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	MW057919	Pseudomonas phage vB_PaeM_kmuB, complete genome	254129-254165	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	NC_004629	Pseudomonas phage phiKZ, complete genome	255110-255146	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	MN871480	UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome	29654-29690	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	DI373487	KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof	53099-53135	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	61552-61588	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	NC_042081	Pseudomonas phage SL2, complete genome	31436-31472	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	NC_042060	Pseudomonas phage PA7, partial genome	53099-53135	7	0.811
NC_009012_3	3.212\|2732680\|37\|NC_009012\|CRT	2732680-2732716	37	AP019418	Pseudomonas phage PA02 DNA, nearly complete genome	248789-248825	7	0.811
NC_009012_4	4.67\|3790103\|35\|NC_009012\|CRISPRCasFinder,CRT,PILER-CR	3790103-3790137	35	NZ_LR135490	Enterococcus faecium isolate E8414 plasmid 3	25697-25731	7	0.8
NC_009012_4	4.67\|3790103\|35\|NC_009012\|CRISPRCasFinder,CRT,PILER-CR	3790103-3790137	35	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	107600-107634	7	0.8
NC_009012_1	1.31\|718826\|36\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	718826-718861	36	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	70589-70624	8	0.778
NC_009012_3	3.95\|2736112\|36\|NC_009012\|CRISPRCasFinder	2736112-2736147	36	MN693289	Marine virus AFVG_25M43, complete genome	21565-21600	8	0.778
NC_009012_3	3.311\|2739337\|39\|NC_009012\|CRT	2739337-2739375	39	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	202897-202935	8	0.795
NC_009012_3	3.388\|2736113\|36\|NC_009012\|PILER-CR	2736113-2736148	36	MN693289	Marine virus AFVG_25M43, complete genome	21565-21600	8	0.778
NC_009012_1	1.9\|717358\|37\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	717358-717394	37	AP014424	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S46-C243, * SEQUENCING IN PROGRESS *, 3 ordered pieces	188-224	9	0.757
NC_009012_2	2.52\|1716069\|35\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	1716069-1716103	35	MG945712	UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome	973-1007	9	0.743
NC_009012_2	2.74\|1717551\|36\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	1717551-1717586	36	KX397372	Erwinia phage vB_EamM_Phobos, complete genome	135396-135431	9	0.75
NC_009012_3	3.3\|2729908\|37\|NC_009012\|CRISPRCasFinder	2729908-2729944	37	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	102383-102419	9	0.757
NC_009012_3	3.62\|2733892\|38\|NC_009012\|CRISPRCasFinder	2733892-2733929	38	NZ_CP018748	Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed3	9243-9280	9	0.763
NC_009012_3	3.62\|2733892\|38\|NC_009012\|CRISPRCasFinder	2733892-2733929	38	NZ_CP028868	Borreliella garinii strain 20047 plasmid cp32-6, complete sequence	9294-9331	9	0.763
NC_009012_3	3.75\|2734764\|36\|NC_009012\|CRISPRCasFinder	2734764-2734799	36	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	593629-593664	9	0.75
NC_009012_3	3.75\|2734764\|36\|NC_009012\|CRISPRCasFinder	2734764-2734799	36	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	132690-132725	9	0.75
NC_009012_3	3.75\|2734764\|36\|NC_009012\|CRISPRCasFinder	2734764-2734799	36	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	662573-662608	9	0.75
NC_009012_3	3.75\|2734764\|36\|NC_009012\|CRISPRCasFinder	2734764-2734799	36	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	662589-662624	9	0.75
NC_009012_3	3.148\|2739672\|37\|NC_009012\|CRISPRCasFinder	2739672-2739708	37	NC_010523	Tetragenococcus halophilus plasmid pHDC DNA, complete sequence	11093-11129	9	0.757
NC_009012_3	3.243\|2734764\|37\|NC_009012\|CRT	2734764-2734800	37	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	593629-593665	9	0.757
NC_009012_3	3.243\|2734764\|37\|NC_009012\|CRT	2734764-2734800	37	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	132689-132725	9	0.757
NC_009012_3	3.243\|2734764\|37\|NC_009012\|CRT	2734764-2734800	37	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	662572-662608	9	0.757
NC_009012_3	3.243\|2734764\|37\|NC_009012\|CRT	2734764-2734800	37	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	662588-662624	9	0.757
NC_009012_3	3.263\|2736112\|37\|NC_009012\|CRT	2736112-2736148	37	MN693289	Marine virus AFVG_25M43, complete genome	21564-21600	9	0.757
NC_009012_3	3.355\|2733893\|38\|NC_009012\|PILER-CR	2733893-2733930	38	NZ_CP018748	Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed3	9243-9280	9	0.763
NC_009012_3	3.355\|2733893\|38\|NC_009012\|PILER-CR	2733893-2733930	38	NZ_CP028868	Borreliella garinii strain 20047 plasmid cp32-6, complete sequence	9294-9331	9	0.763
NC_009012_3	3.368\|2734765\|36\|NC_009012\|PILER-CR	2734765-2734800	36	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	593629-593664	9	0.75
NC_009012_3	3.368\|2734765\|36\|NC_009012\|PILER-CR	2734765-2734800	36	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	132690-132725	9	0.75
NC_009012_3	3.368\|2734765\|36\|NC_009012\|PILER-CR	2734765-2734800	36	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	662573-662608	9	0.75
NC_009012_3	3.368\|2734765\|36\|NC_009012\|PILER-CR	2734765-2734800	36	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	662589-662624	9	0.75
NC_009012_3	3.441\|2739673\|37\|NC_009012\|PILER-CR	2739673-2739709	37	NC_010523	Tetragenococcus halophilus plasmid pHDC DNA, complete sequence	11093-11129	9	0.757
NC_009012_4	4.45\|3788480\|35\|NC_009012\|CRISPRCasFinder,CRT,PILER-CR	3788480-3788514	35	KP282675	Acidianus rod-shaped virus 2 strain ARV2, complete genome	4154-4188	9	0.743
NC_009012_5	5.21\|3814717\|36\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	3814717-3814752	36	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	188027-188062	9	0.75
NC_009012_1	1.31\|718826\|36\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	718826-718861	36	NZ_CP026602	Clostridiaceae bacterium 14S0207 plasmid unnamed2, complete sequence	30162-30197	10	0.722
NC_009012_3	3.41\|2732477\|37\|NC_009012\|CRISPRCasFinder	2732477-2732513	37	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	619-655	10	0.73
NC_009012_3	3.41\|2732477\|37\|NC_009012\|CRISPRCasFinder	2732477-2732513	37	MN699848	Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence	49357-49393	10	0.73
NC_009012_3	3.66\|2734160\|37\|NC_009012\|CRISPRCasFinder	2734160-2734196	37	NZ_LR217736	Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi	1630-1666	10	0.73
NC_009012_3	3.143\|2739337\|38\|NC_009012\|CRISPRCasFinder	2739337-2739374	38	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	202898-202935	10	0.737
NC_009012_3	3.171\|2729908\|38\|NC_009012\|CRT	2729908-2729945	38	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	102383-102420	10	0.737
NC_009012_3	3.359\|2734161\|37\|NC_009012\|PILER-CR	2734161-2734197	37	NZ_LR217736	Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi	1630-1666	10	0.73
NC_009012_3	3.436\|2739338\|38\|NC_009012\|PILER-CR	2739338-2739375	38	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	202898-202935	10	0.737
NC_009012_4	4.49\|3788774\|36\|NC_009012\|CRISPRCasFinder,CRT,PILER-CR	3788774-3788809	36	MN657047	Psychrobacter sp. strain ANT_H19 plasmid pA19H1, complete sequence	4232-4267	10	0.722
NC_009012_5	5.17\|3814426\|37\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	3814426-3814462	37	NC_015221	Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence	28542-28578	10	0.73
NC_009012_5	5.17\|3814426\|37\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	3814426-3814462	37	NC_015223	Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence	53347-53383	11	0.703
NC_009012_5	5.37\|3815908\|35\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	3815908-3815942	35	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	1150650-1150684	11	0.686
NC_009012_2	2.19\|1713847\|39\|NC_009012\|PILER-CR,CRISPRCasFinder,CRT	1713847-1713885	39	KR296695	UNVERIFIED: Salmonella phage 41, complete genome	88649-88687	12	0.692

1. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

2. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

3. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

4. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

5. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

6. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

7. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

8. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

9. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

10. spacer 3.44|2732680|36|NC_009012|CRISPRCasFinder matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

11. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

12. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

13. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

14. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

15. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

16. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

17. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

18. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

19. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

20. spacer 3.337|2732681|36|NC_009012|PILER-CR matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 6, identity: 0.833

taactgatggaatctattacaaaagaaaa--aagttca	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggtt--	Protospacer
 ***************** ******** *  *.***

21. spacer 4.67|3790103|35|NC_009012|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 6, identity: 0.829

tagcacacaacagcaaaaaaacaaagaaaaaaaga	CRISPR spacer
gaaaaaacaacagcataaacacaaagaaaaaaaga	Protospacer
 *. * ********* *** ***************

22. spacer 3.212|2732680|37|NC_009012|CRT matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

23. spacer 3.212|2732680|37|NC_009012|CRT matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

24. spacer 3.212|2732680|37|NC_009012|CRT matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

25. spacer 3.212|2732680|37|NC_009012|CRT matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

26. spacer 3.212|2732680|37|NC_009012|CRT matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

27. spacer 3.212|2732680|37|NC_009012|CRT matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

28. spacer 3.212|2732680|37|NC_009012|CRT matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

29. spacer 3.212|2732680|37|NC_009012|CRT matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

30. spacer 3.212|2732680|37|NC_009012|CRT matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

31. spacer 3.212|2732680|37|NC_009012|CRT matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 7, identity: 0.811

taactgatggaatctattacaaaagaaaa--aagttcag	CRISPR spacer
gaactgatggaatctatttcaaaagaatatcaggttt--	Protospacer
 ***************** ******** *  *.***.

32. spacer 4.67|3790103|35|NC_009012|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR135490 (Enterococcus faecium isolate E8414 plasmid 3) position: , mismatch: 7, identity: 0.8

tagc-acacaacagcaaaaaaacaaagaaaaaaaga	CRISPR spacer
-agcaattgaaaagcaaaaagacaaagaaaaaaagg	Protospacer
 *** *.  ** ********.**************.

33. spacer 4.67|3790103|35|NC_009012|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 7, identity: 0.8

tagc-acacaacagcaaaaaaacaaagaaaaaaaga	CRISPR spacer
-agcaattgaaaagcaaaaagacaaagaaaaaaagg	Protospacer
 *** *.  ** ********.**************.

34. spacer 1.31|718826|36|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 8, identity: 0.778

cagaaaacttgtgaactaccgccacttatagaagtg	CRISPR spacer
cttatatattgtgaactaccaccacttatagaagat	Protospacer
*  * *  ************.*************

35. spacer 3.95|2736112|36|NC_009012|CRISPRCasFinder matches to MN693289 (Marine virus AFVG_25M43, complete genome) position: , mismatch: 8, identity: 0.778

tgaaagcgaagcccttcctaaaggctataaaactaa	CRISPR spacer
taaacttgaagagcttcctaaaggctataaaacaat	Protospacer
*.**  .****  ******************** *

36. spacer 3.311|2739337|39|NC_009012|CRT matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 8, identity: 0.795

gaagcagcaagaagggctggttatagc----gagaaaacagca	CRISPR spacer
gaagcagcaaaaagggctggatatagcgctagaggcaac----	Protospacer
**********.********* ******    ***. ***

37. spacer 3.388|2736113|36|NC_009012|PILER-CR matches to MN693289 (Marine virus AFVG_25M43, complete genome) position: , mismatch: 8, identity: 0.778

tgaaagcgaagcccttcctaaaggctataaaactaa	CRISPR spacer
taaacttgaagagcttcctaaaggctataaaacaat	Protospacer
*.**  .****  ******************** *

38. spacer 1.9|717358|37|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to AP014424 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S46-C243, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 9, identity: 0.757

gctctaa--cagtaattcaattatttttgtattcatttg	CRISPR spacer
--tgtgatcccataatttaattttttttgtattcatttt	Protospacer
  * *.*  * .*****.**** ***************

39. spacer 2.52|1716069|35|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to MG945712 (UNVERIFIED: Microviridae sp. isolate 1921-1801, complete genome) position: , mismatch: 9, identity: 0.743

tctcgctcgaataaaattggtacatcatatttttc	CRISPR spacer
cgtaaattgaataaagtttgtacatcatattttta	Protospacer
. * . *.*******.** ***************

40. spacer 2.74|1717551|36|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to KX397372 (Erwinia phage vB_EamM_Phobos, complete genome) position: , mismatch: 9, identity: 0.75

tcaccgttaggaaagttgatagtgaacacgctgtta	CRISPR spacer
gtaccgtcagaaaagttgatagtgaacaccgcggca	Protospacer
 .*****.**.******************  .* .*

41. spacer 3.3|2729908|37|NC_009012|CRISPRCasFinder matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 9, identity: 0.757

atgagtatcaattaagattattacttgaattaaagtg	CRISPR spacer
tttcttataaattaagattgttacttgaattataaag	Protospacer
 *   *** **********.************ *. *

42. spacer 3.62|2733892|38|NC_009012|CRISPRCasFinder matches to NZ_CP018748 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed3) position: , mismatch: 9, identity: 0.763

gctgcagaaatatatcaaatcacaaaaga---gccaatcga	CRISPR spacer
catgcagaaatatttcaaatcataaaagatgtggcaac---	Protospacer
  *********** ********.******   * ***.

43. spacer 3.62|2733892|38|NC_009012|CRISPRCasFinder matches to NZ_CP028868 (Borreliella garinii strain 20047 plasmid cp32-6, complete sequence) position: , mismatch: 9, identity: 0.763

gctgcagaaatatatcaaatcacaaaaga---gccaatcga	CRISPR spacer
catgcagaaatatttcaaatcataaaagatgtggcaac---	Protospacer
  *********** ********.******   * ***.

44. spacer 3.75|2734764|36|NC_009012|CRISPRCasFinder matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

45. spacer 3.75|2734764|36|NC_009012|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

46. spacer 3.75|2734764|36|NC_009012|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

47. spacer 3.75|2734764|36|NC_009012|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

48. spacer 3.148|2739672|37|NC_009012|CRISPRCasFinder matches to NC_010523 (Tetragenococcus halophilus plasmid pHDC DNA, complete sequence) position: , mismatch: 9, identity: 0.757

ggtttggtgatattttagccagtattgaaagtttggg	CRISPR spacer
agaaagttgatattttaactagtattgaaagttcagg	Protospacer
.*   * **********.*.*************..**

49. spacer 3.243|2734764|37|NC_009012|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.757

gagttctgatattggatttggaacacttgatatagta	CRISPR spacer
tgattacgatattggttttggaacaattgatatggaa	Protospacer
 ..** .******** ********* *******.* *

50. spacer 3.243|2734764|37|NC_009012|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.757

gagttctgatattggatttggaacacttgatatagta	CRISPR spacer
tgattacgatattggttttggaacaattgatatggaa	Protospacer
 ..** .******** ********* *******.* *

51. spacer 3.243|2734764|37|NC_009012|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.757

gagttctgatattggatttggaacacttgatatagta	CRISPR spacer
tgattacgatattggttttggaacaattgatatggaa	Protospacer
 ..** .******** ********* *******.* *

52. spacer 3.243|2734764|37|NC_009012|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.757

gagttctgatattggatttggaacacttgatatagta	CRISPR spacer
tgattacgatattggttttggaacaattgatatggaa	Protospacer
 ..** .******** ********* *******.* *

53. spacer 3.263|2736112|37|NC_009012|CRT matches to MN693289 (Marine virus AFVG_25M43, complete genome) position: , mismatch: 9, identity: 0.757

tgaaagcgaagcccttcctaaaggctataaaactaaa	CRISPR spacer
taaacttgaagagcttcctaaaggctataaaacaatg	Protospacer
*.**  .****  ******************** * .

54. spacer 3.355|2733893|38|NC_009012|PILER-CR matches to NZ_CP018748 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed3) position: , mismatch: 9, identity: 0.763

gctgcagaaatatatcaaatcacaaaaga---gccaatcga	CRISPR spacer
catgcagaaatatttcaaatcataaaagatgtggcaac---	Protospacer
  *********** ********.******   * ***.

55. spacer 3.355|2733893|38|NC_009012|PILER-CR matches to NZ_CP028868 (Borreliella garinii strain 20047 plasmid cp32-6, complete sequence) position: , mismatch: 9, identity: 0.763

gctgcagaaatatatcaaatcacaaaaga---gccaatcga	CRISPR spacer
catgcagaaatatttcaaatcataaaagatgtggcaac---	Protospacer
  *********** ********.******   * ***.

56. spacer 3.368|2734765|36|NC_009012|PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

57. spacer 3.368|2734765|36|NC_009012|PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

58. spacer 3.368|2734765|36|NC_009012|PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

59. spacer 3.368|2734765|36|NC_009012|PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.75

gagttctgatattggatttggaacacttgatatagt	CRISPR spacer
tgattacgatattggttttggaacaattgatatgga	Protospacer
 ..** .******** ********* *******.*

60. spacer 3.441|2739673|37|NC_009012|PILER-CR matches to NC_010523 (Tetragenococcus halophilus plasmid pHDC DNA, complete sequence) position: , mismatch: 9, identity: 0.757

ggtttggtgatattttagccagtattgaaagtttggg	CRISPR spacer
agaaagttgatattttaactagtattgaaagttcagg	Protospacer
.*   * **********.*.*************..**

61. spacer 4.45|3788480|35|NC_009012|CRISPRCasFinder,CRT,PILER-CR matches to KP282675 (Acidianus rod-shaped virus 2 strain ARV2, complete genome) position: , mismatch: 9, identity: 0.743

ataattcttctcgtttttgttttaattcgtttatt	CRISPR spacer
ctaatttttctcatttttgttttaatattactact	Protospacer
 *****.*****.************* .  .**.*

62. spacer 5.21|3814717|36|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.75

cagtattgcattgttattcctcgctttctttttgtt	CRISPR spacer
cctagtcccattgttattcctcgctttctacttgta	Protospacer
*   .*. ********************* .****

63. spacer 1.31|718826|36|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026602 (Clostridiaceae bacterium 14S0207 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.722

cagaaaacttgtgaactaccgccacttatagaagtg	CRISPR spacer
acattaggttgtgaactaccaccacttatagaagat	Protospacer
  .  *. ************.*************

64. spacer 3.41|2732477|37|NC_009012|CRISPRCasFinder matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 10, identity: 0.73

tatactggtccagtgaatggtccagtgaatttgaaac	CRISPR spacer
cttctttttccagtgcatggtctagtgaatttgataa	Protospacer
. * .*  ******* ******.*********** *

65. spacer 3.41|2732477|37|NC_009012|CRISPRCasFinder matches to MN699848 (Citrobacter pasteurii strain 175G8 plasmid pCfr-OXA-198, complete sequence) position: , mismatch: 10, identity: 0.73

tatactggtccagtgaatggtccagtgaatttgaaac	CRISPR spacer
cttctttttccagtgcatggtctagtgaatttgataa	Protospacer
. * .*  ******* ******.*********** *

66. spacer 3.66|2734160|37|NC_009012|CRISPRCasFinder matches to NZ_LR217736 (Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi) position: , mismatch: 10, identity: 0.73

attactcttaaatatatattaacatatttttattaca	CRISPR spacer
acttattttaagtatatattaatatatttttatatgt	Protospacer
*.*  *.****.**********.**********

67. spacer 3.143|2739337|38|NC_009012|CRISPRCasFinder matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 10, identity: 0.737

gaagcagcaagaagggctggttatagcgagaaaacagc	CRISPR spacer
gaagcagcaaaaagggctggatatagcgctagaggcaa	Protospacer
**********.********* *******  *.*.  .

68. spacer 3.171|2729908|38|NC_009012|CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 10, identity: 0.737

atgagtatcaattaagattattacttgaattaaagtgg	CRISPR spacer
tttcttataaattaagattgttacttgaattataaaga	Protospacer
 *   *** **********.************ *. *.

69. spacer 3.359|2734161|37|NC_009012|PILER-CR matches to NZ_LR217736 (Candidatus Erwinia haradaeae strain ErCisplendens isolate 3004 plasmid pBioThi) position: , mismatch: 10, identity: 0.73

attactcttaaatatatattaacatatttttattaca	CRISPR spacer
acttattttaagtatatattaatatatttttatatgt	Protospacer
*.*  *.****.**********.**********

70. spacer 3.436|2739338|38|NC_009012|PILER-CR matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 10, identity: 0.737

gaagcagcaagaagggctggttatagcgagaaaacagc	CRISPR spacer
gaagcagcaaaaagggctggatatagcgctagaggcaa	Protospacer
**********.********* *******  *.*.  .

71. spacer 4.49|3788774|36|NC_009012|CRISPRCasFinder,CRT,PILER-CR matches to MN657047 (Psychrobacter sp. strain ANT_H19 plasmid pA19H1, complete sequence) position: , mismatch: 10, identity: 0.722

ttaattcatcgccatttttgcctataagtccataaa	CRISPR spacer
atagttcatcgccattttttcctataattgggtgtt	Protospacer
 **.*************** ******* *  .*.

72. spacer 5.17|3814426|37|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NC_015221 (Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequence) position: , mismatch: 10, identity: 0.73

aatattggaatccaaaataaccttcaattttccacca	CRISPR spacer
aatattgcaatccaaattaaccttcagtgaagctctg	Protospacer
******* ******** *********.*    * *..

73. spacer 5.17|3814426|37|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NC_015223 (Nitrosomonas sp. AL212 plasmid pNAL21201, complete sequence) position: , mismatch: 11, identity: 0.703

aatattggaatccaaaataaccttcaattttccacca	CRISPR spacer
aatattgcaatccaaattaaccttcagtgaagctttg	Protospacer
******* ******** *********.*    * ...

74. spacer 5.37|3815908|35|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 11, identity: 0.686

ttttgtcaagccattgatacatcctttaatgtcta	CRISPR spacer
tcgccataagcctttgatacattctttaatgtgac	Protospacer
*. .  .***** *********.*********

75. spacer 2.19|1713847|39|NC_009012|PILER-CR,CRISPRCasFinder,CRT matches to KR296695 (UNVERIFIED: Salmonella phage 41, complete genome) position: , mismatch: 12, identity: 0.692

ttctatggtcggagtgactggatttgaaccagcgacctc	CRISPR spacer
gaatttggtcggggtgactggattcgaaccagcatatag	Protospacer
   * *******.***********.********.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

302271 : 380377

Bacillus_phage(23.08%)

protease,coat,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003512006.1\|302271_303219_-\|transposase	IS982-like element ISCth1 family transposase	NA	NA	NA	NA
WP_003518160.1\|303360_305769_+	peptidase C11	NA	NA	NA	NA
WP_003512380.1\|305802_306993_+	RNA-splicing ligase RtcB	A0A0S2MUF8	Bacillus_phage	5.2e-139	60.4
WP_003512382.1\|307067_309608_+	transglutaminase domain-containing protein	NA	NA	NA	NA
WP_003512384.1\|309625_310777_+	hypothetical protein	NA	NA	NA	NA
WP_003512386.1\|310733_311723_+	MoxR family ATPase	NA	NA	NA	NA
WP_003512387.1\|311723_313064_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_003512389.1\|313067_313691_+	hypothetical protein	NA	NA	NA	NA
WP_003518163.1\|313875_316014_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_165480303.1\|316133_317189_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA
WP_003512395.1\|317318_318728_+	LytTR family transcriptional regulator	E5ERA2	Bathycoccus_sp._RCC1105_virus	1.8e-08	37.0
WP_003512397.1\|318751_319336_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_011837788.1\|319558_321682_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_003512401.1\|321845_322499_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_003512405.1\|322557_323853_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.9e-82	42.2
WP_003512407.1\|324118_324490_+	hypothetical protein	NA	NA	NA	NA
WP_003512409.1\|324590_325016_+	hypothetical protein	NA	NA	NA	NA
WP_003512411.1\|325266_326388_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_003512414.1\|326613_328101_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	8.0e-12	48.5
WP_003512416.1\|328213_330250_-	anti-sigma factor domain-containing protein	NA	NA	NA	NA
WP_003512418.1\|330230_331028_-	RNA polymerase sigma-I factor	NA	NA	NA	NA
WP_003512420.1\|331570_333004_+	endoglucanase	NA	NA	NA	NA
WP_003518171.1\|333150_334605_+	glycoside hydrolase	A0A1X9VNM7	Mimivirus	1.3e-59	33.8
WP_003512422.1\|334820_335747_+	type 3a, cellulose-binding protein	NA	NA	NA	NA
WP_003518173.1\|335876_337031_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_011837790.1\|337172_338777_-	diguanylate cyclase	G3MA91	Bacillus_virus	5.2e-09	32.1
WP_003518175.1\|339018_340710_-	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_003518177.1\|341279_343715_+	glycosyl transferase	NA	NA	NA	NA
WP_003512427.1\|343979_344939_+	D-2-hydroxyacid dehydrogenase	M1HTA3	Paramecium_bursaria_Chlorella_virus	2.0e-24	29.8
WP_041734449.1\|345501_346374_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003512434.1\|346370_347066_+	RNA pseudouridine synthase	NA	NA	NA	NA
WP_003512436.1\|347153_347372_+	hypothetical protein	NA	NA	NA	NA
WP_003512438.1\|347374_347683_+\|coat	spore coat protein	NA	NA	NA	NA
WP_003512440.1\|347989_349432_+	glycogen synthase GlgA	NA	NA	NA	NA
WP_003512442.1\|349656_350604_-	aldo/keto reductase family protein	NA	NA	NA	NA
WP_003518182.1\|350816_352175_+	ATP-binding protein	NA	NA	NA	NA
WP_003512448.1\|352375_353584_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_003512454.1\|353825_355100_+	hybrid sensor histidine kinase/response regulator	W8CYF6	Bacillus_phage	2.8e-29	30.6
WP_011837794.1\|355144_358627_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	1.3e-28	30.4
WP_003512457.1\|358783_359893_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_011837795.1\|359966_362324_+	ATP-dependent DNA helicase	NA	NA	NA	NA
WP_011837796.1\|362394_363681_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_003512463.1\|363972_366015_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_003512473.1\|366399_367620_+\|transposase	IS256-like element ISCth5 family transposase	A0A220NQR7	Corynebacterium_phage	5.6e-96	49.0
WP_003512474.1\|367691_368135_+	hypothetical protein	NA	NA	NA	NA
WP_037295399.1\|368349_368598_+	hypothetical protein	NA	NA	NA	NA
WP_041734217.1\|368545_368734_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003512475.1\|368997_370116_-	phosphoserine transaminase	NA	NA	NA	NA
WP_003519284.1\|370826_372302_+	hypothetical protein	NA	NA	NA	NA
WP_003512478.1\|372381_372765_+	MCP four helix bundle domain-containing protein	NA	NA	NA	NA
WP_011837797.1\|372820_374623_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-07	42.6
WP_003512482.1\|374725_376096_+	MATE family efflux transporter	NA	NA	NA	NA
WP_011837798.1\|376195_376813_-\|coat	SafA/ExsA family spore coat assembly protein	A0A0E3T7R5	Bacillus_phage	3.7e-56	55.0
WP_011837799.1\|376993_377749_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003512488.1\|377768_378209_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003512490.1\|378254_378449_-	hypothetical protein	NA	NA	NA	NA
WP_003512492.1\|378535_378982_-	hypothetical protein	NA	NA	NA	NA
WP_003511744.1\|379306_380377_+\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7

DBSCAN-SWA_2

720605 : 793682

Enterobacteria_phage(16.67%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011838186.1\|720605_721758_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_003512473.1\|721918_723139_-\|transposase	IS256-like element ISCth5 family transposase	A0A220NQR7	Corynebacterium_phage	5.6e-96	49.0
WP_003511744.1\|723749_724820_+\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7
WP_011837877.1\|726132_727284_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_003516481.1\|727659_728325_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003516485.1\|729767_729968_-	hypothetical protein	NA	NA	NA	NA
WP_003512473.1\|730555_731776_+\|transposase	IS256-like element ISCth5 family transposase	A0A220NQR7	Corynebacterium_phage	5.6e-96	49.0
WP_003516489.1\|731946_733014_+	hypothetical protein	NA	NA	NA	NA
WP_003516491.1\|733086_733710_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003516493.1\|733974_734175_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_003516495.1\|734177_734945_+	thiazole synthase	NA	NA	NA	NA
WP_003516497.1\|735073_736183_+	2-iminoacetate synthase ThiH	NA	NA	NA	NA
WP_003516498.1\|736259_736904_+	sulfur carrier protein ThiS adenylyltransferase ThiF	NA	NA	NA	NA
WP_003520957.1\|736903_737974_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_003516504.1\|737975_739274_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_003516505.1\|739754_740279_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003516507.1\|740303_740561_+	hypothetical protein	NA	NA	NA	NA
WP_004463247.1\|740564_741677_+	C40 family peptidase	A0A0A8WF62	Clostridium_phage	2.2e-22	43.5
WP_003516511.1\|741756_744093_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	4.3e-36	34.8
WP_004463251.1\|744283_745333_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_003516515.1\|745326_746376_+	M42 family metallopeptidase	NA	NA	NA	NA
WP_003516517.1\|746422_747400_+	M42 family metallopeptidase	NA	NA	NA	NA
WP_004463254.1\|747662_748730_+	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_011837879.1\|748840_750466_+	MBL fold metallo-hydrolase	Q331V3	Clostridium_botulinum_C_phage	4.6e-21	32.2
WP_004463257.1\|750622_752134_+	sodium:solute symporter family protein	NA	NA	NA	NA
WP_004463260.1\|752449_754186_+	indolepyruvate ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA
WP_003516525.1\|754188_754764_+	indolepyruvate oxidoreductase subunit beta	NA	NA	NA	NA
WP_004463266.1\|754873_756175_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_003516528.1\|756229_756661_+	ACT domain-containing protein	NA	NA	NA	NA
WP_003516530.1\|756694_757993_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.4e-116	53.3
WP_003516532.1\|758152_758317_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_003516534.1\|758313_760479_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_003520966.1\|760552_760774_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_003516540.1\|761094_761487_+	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_003516545.1\|761563_762592_-	S-methyl-5-thioribose-1-phosphate isomerase	NA	NA	NA	NA
WP_003516547.1\|762636_763443_-	S-methyl-5'-thioadenosine phosphorylase	NA	NA	NA	NA
WP_003516549.1\|763712_764351_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_003516552.1\|765031_769837_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_003520969.1\|770400_772533_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_003516556.1\|772746_774159_+	hypothetical protein	NA	NA	NA	NA
WP_003516558.1\|774346_775222_+	hypothetical protein	NA	NA	NA	NA
WP_003516560.1\|775191_776028_+	hypothetical protein	NA	NA	NA	NA
WP_003516561.1\|776049_777495_+	CpaF family protein	NA	NA	NA	NA
WP_003516564.1\|777484_778462_+	hypothetical protein	NA	NA	NA	NA
WP_003516566.1\|778455_779340_+	hypothetical protein	NA	NA	NA	NA
WP_003516568.1\|779401_779617_+	hypothetical protein	NA	NA	NA	NA
WP_003516570.1\|779674_780277_+	hypothetical protein	NA	NA	NA	NA
WP_003516571.1\|780295_780781_+	hypothetical protein	NA	NA	NA	NA
WP_003516573.1\|780811_782899_-	DUF5050 domain-containing protein	A0A1V0SBL0	Catovirus	6.6e-12	27.2
WP_004463275.1\|783021_783852_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_003516577.1\|783987_784236_-	EsaB/YukD family protein	NA	NA	NA	NA
WP_003516579.1\|784387_784690_-	WXG100 family type VII secretion target	NA	NA	NA	NA
WP_003516581.1\|784826_789506_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	3.6e-50	23.1
WP_003516583.1\|789711_790914_-	glycoside hydrolase	NA	NA	NA	NA
WP_003516585.1\|791132_792881_+	dockerin	A0A1X9VNR6	Mimivirus	6.5e-13	26.7
WP_003516586.1\|793146_793332_+	hypothetical protein	NA	NA	NA	NA
WP_003516587.1\|793439_793682_-\|coat	spore coat protein	NA	NA	NA	NA

DBSCAN-SWA_3

1289869 : 1342918

Bacillus_phage(22.22%)

protease,transposase,integrase,coat

attL 1340314:1340331|attR 1347689:1347706

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003515715.1\|1289869_1290919_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_003515717.1\|1290924_1291962_+\|coat	CotS family spore coat protein	NA	NA	NA	NA
WP_011837962.1\|1291978_1293271_+	glycosyltransferase	NA	NA	NA	NA
WP_003515721.1\|1293342_1294329_+	GDP-mannose 4,6-dehydratase	M1HHF3	Acanthocystis_turfacea_Chlorella_virus	1.6e-48	36.7
WP_003515723.1\|1294406_1294670_-	DUF3343 domain-containing protein	NA	NA	NA	NA
WP_003515725.1\|1294738_1295479_-	hypothetical protein	NA	NA	NA	NA
WP_003515727.1\|1295750_1296017_-	stage V sporulation protein S	J9PTX7	Bacillus_phage	2.5e-09	43.8
WP_003515729.1\|1296182_1296965_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_004463536.1\|1297089_1298664_-	ribonuclease Y	NA	NA	NA	NA
WP_003515733.1\|1298781_1299459_-	hypothetical protein	A7KV15	Bacillus_phage	4.6e-31	40.3
WP_003515736.1\|1299553_1300411_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	9.2e-37	37.7
WP_003515738.1\|1300519_1302439_-	YgiQ family radical SAM protein	M1QSD9	Pseudomonas_phage	1.2e-44	39.5
WP_003521254.1\|1302530_1304957_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.8e-90	49.6
WP_003515744.1\|1305130_1305355_-	YlzJ-like family protein	NA	NA	NA	NA
WP_003515746.1\|1305351_1306125_-\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA
WP_003521255.1\|1306275_1307565_-	hypothetical protein	NA	NA	NA	NA
WP_011837963.1\|1307592_1310142_-	hypothetical protein	NA	NA	NA	NA
WP_011837964.1\|1310218_1310740_-	type II secretion system protein	NA	NA	NA	NA
WP_004463543.1\|1310785_1312078_-	hypothetical protein	NA	NA	NA	NA
WP_003515756.1\|1312077_1312629_-	PilN domain-containing protein	NA	NA	NA	NA
WP_011837965.1\|1312654_1313221_-	type II secretion system protein	NA	NA	NA	NA
WP_011837966.1\|1313330_1313861_-	type II secretion system protein	NA	NA	NA	NA
WP_004463551.1\|1314017_1315232_-	type II secretion system F family protein	NA	NA	NA	NA
WP_011837967.1\|1315690_1316746_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_003515767.1\|1316761_1319125_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_157881697.1\|1319450_1319612_-	hypothetical protein	NA	NA	NA	NA
WP_011837968.1\|1320464_1321319_-	permease	NA	NA	NA	NA
WP_003519126.1\|1321427_1321829_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	1.1e-19	40.0
WP_041734232.1\|1321853_1322909_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_003519130.1\|1323044_1323443_-	winged helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	1.6e-12	54.4
WP_011837971.1\|1327371_1329258_-	TniQ family protein	NA	NA	NA	NA
WP_011837972.1\|1329263_1330919_-	ATP-binding protein	NA	NA	NA	NA
WP_011837973.1\|1330911_1333077_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_011837974.1\|1333073_1333919_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_020458088.1\|1334224_1334416_+	hypothetical protein	NA	NA	NA	NA
WP_011837975.1\|1334483_1335353_-	hypothetical protein	NA	NA	NA	NA
WP_011837976.1\|1335349_1336144_-	hypothetical protein	NA	NA	NA	NA
WP_011837977.1\|1336157_1336532_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011837978.1\|1336696_1336978_-	hypothetical protein	NA	NA	NA	NA
WP_041734234.1\|1336978_1337158_-	hypothetical protein	NA	NA	NA	NA
WP_020458076.1\|1337352_1337574_-	hypothetical protein	NA	NA	NA	NA
WP_011837980.1\|1337686_1338523_-	DUF1848 domain-containing protein	NA	NA	NA	NA
WP_011837981.1\|1338775_1339555_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_020458077.1\|1339691_1339949_-	hypothetical protein	NA	NA	NA	NA
WP_011837982.1\|1340012_1340231_-	hypothetical protein	NA	NA	NA	NA
1340314:1340331	attL	NA	NA	NA	NA
WP_020458078.1\|1340387_1340606_-	hypothetical protein	NA	NA	NA	NA
WP_011837983.1\|1340799_1341273_-	hypothetical protein	NA	NA	NA	NA
WP_011837984.1\|1342012_1342918_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JB04	uncultured_Caudovirales_phage	8.6e-09	23.9
1347689:1347706	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1507661 : 1517084

Prochlorococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004463623.1\|1507661_1508834_+	glycosyltransferase	A0A1V0SAH6	Catovirus	3.2e-16	43.5
WP_003517447.1\|1508880_1510140_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_004463626.1\|1510164_1511709_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.3e-46	51.8
WP_004463628.1\|1511772_1512402_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.8e-21	37.2
WP_003517454.1\|1512395_1513418_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.6e-70	46.1
WP_004463634.1\|1513510_1514977_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	7.8e-60	33.2
WP_003517457.1\|1515027_1515549_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.8e-26	52.1
WP_003517459.1\|1515686_1517084_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	6.5e-48	31.5

DBSCAN-SWA_5

1938475 : 2016575

Erysipelothrix_phage(56.0%)

portal,tail,head,holin,transposase,protease,capsid,terminase,integrase

attL 2000661:2000720|attR 2016575:2018022

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004400096.1\|1938475_1938967_-	hypothetical protein	A0A2K5B2B3	Erysipelothrix_phage	1.8e-21	42.3
WP_004400095.1\|1938930_1940499_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	4.3e-149	51.7
WP_004400094.1\|1940560_1940779_-	hypothetical protein	NA	NA	NA	NA
WP_004400093.1\|1940836_1941841_-	N-acetylmuramoyl-L-alanine amidase	H7BV89	unidentified_phage	5.4e-12	71.4
WP_004400092.1\|1941837_1942257_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	4.6e-50	69.1
WP_041734274.1\|1942343_1944812_-	glycosyl hydrolase	A0A2K5B2A1	Erysipelothrix_phage	0.0e+00	68.6
WP_011838142.1\|1944808_1945384_-	hypothetical protein	A0A2K5B2A0	Erysipelothrix_phage	6.2e-53	52.9
WP_011838143.1\|1945393_1945588_-	hypothetical protein	A0A2K5B299	Erysipelothrix_phage	6.3e-18	64.6
WP_011838144.1\|1945598_1948121_-\|tail	phage tail protein	A0A2K5B298	Erysipelothrix_phage	0.0e+00	63.1
WP_011838145.1\|1948125_1948899_-\|tail	phage tail family protein	A0A2I4R672	Erysipelothrix_phage	6.5e-74	51.6
WP_011838146.1\|1948912_1951201_-	hypothetical protein	A0A2K5B297	Erysipelothrix_phage	2.5e-12	38.5
WP_004463997.1\|1951334_1951607_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_004463999.1\|1951603_1952008_+	putative toxin-antitoxin system toxin component, PIN family	NA	NA	NA	NA
WP_011838147.1\|1952056_1952248_-	hypothetical protein	A0A2K5B296	Erysipelothrix_phage	5.1e-12	75.6
WP_011838148.1\|1952244_1952628_-	hypothetical protein	A0A2K5B295	Erysipelothrix_phage	1.8e-40	69.6
WP_011838149.1\|1952630_1953227_-\|tail	phage tail protein	A0A2K5B294	Erysipelothrix_phage	3.0e-79	74.2
WP_004400082.1\|1953232_1953577_-	hypothetical protein	A0A2K5B293	Erysipelothrix_phage	2.6e-30	55.9
WP_004400081.1\|1953573_1954005_-	HK97 gp10 family phage protein	A0A2K5B292	Erysipelothrix_phage	5.5e-46	62.9
WP_004400080.1\|1954021_1954357_-\|head,tail	head-tail adaptor protein	A0A2K5B291	Erysipelothrix_phage	2.3e-28	56.0
WP_004400079.1\|1954359_1954668_-\|head,tail	phage gp6-like head-tail connector protein	A0A2K5B290	Erysipelothrix_phage	3.0e-38	75.5
WP_004400078.1\|1954689_1955892_-\|capsid	phage major capsid protein	A0A2I4R671	Erysipelothrix_phage	2.1e-175	77.9
WP_004400077.1\|1955942_1956671_-\|protease	Clp protease ClpP	A0A2K5B288	Erysipelothrix_phage	8.6e-76	64.4
WP_004400076.1\|1956609_1957932_-\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	2.0e-187	74.8
WP_011838151.1\|1958008_1959793_-	AIPR family protein	NA	NA	NA	NA
WP_011838152.1\|1961572_1961767_-	DUF5049 domain-containing protein	NA	NA	NA	NA
WP_011838153.1\|1961770_1962238_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_011838154.1\|1962299_1963199_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	5.3e-51	40.1
WP_041734278.1\|1963340_1963571_-	DUF4314 domain-containing protein	NA	NA	NA	NA
WP_011838156.1\|1963596_1964289_-	virulence factor	A0A2K5B280	Erysipelothrix_phage	1.2e-29	36.1
WP_011838157.1\|1964405_1965659_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	2.7e-101	46.9
WP_011838158.1\|1965664_1966963_-	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	8.1e-77	40.3
WP_004400063.1\|1966937_1967120_-	hypothetical protein	NA	NA	NA	NA
WP_011838159.1\|1967119_1967671_-\|terminase	P27 family phage terminase small subunit	A0A2K5B277	Erysipelothrix_phage	6.9e-70	67.6
WP_011838160.1\|1967791_1968151_-	HNH endonuclease	A0A2K5B276	Erysipelothrix_phage	4.9e-40	62.2
WP_011838161.1\|1968272_1968515_-	hypothetical protein	NA	NA	NA	NA
WP_011838162.1\|1968658_1969657_-	DUF4065 domain-containing protein	A0A0N9SGM1	Paenibacillus_phage	4.7e-16	37.1
WP_034844757.1\|1969696_1970107_-	hypothetical protein	NA	NA	NA	NA
WP_011838164.1\|1970345_1970801_-	hypothetical protein	NA	NA	NA	NA
WP_011838165.1\|1970892_1971195_-	VRR-NUC domain-containing protein	I3VYX6	Thermoanaerobacterium_phage	4.4e-26	64.0
WP_011838166.1\|1971495_1974051_-	DNA primase	D6R422	Bacillus_phage	2.2e-49	39.0
WP_011838167.1\|1974047_1974473_-	hypothetical protein	A0A2K5B270	Erysipelothrix_phage	2.9e-47	61.0
WP_011838168.1\|1974488_1975286_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVZ8	Staphylococcus_phage	2.2e-69	50.2
WP_011838169.1\|1975290_1977213_-	bifunctional 3'-5' exonuclease/DNA polymerase	A0A142F1Q9	Bacillus_phage	5.1e-51	29.2
WP_011838170.1\|1977270_1978023_-	hypothetical protein	I3VYY1	Thermoanaerobacterium_phage	1.0e-47	43.6
WP_041734282.1\|1978144_1978585_-	hypothetical protein	I3VYY4	Thermoanaerobacterium_phage	1.2e-32	53.9
WP_011838173.1\|1980281_1982201_-	hypothetical protein	E4ZFJ9	Streptococcus_phage	3.0e-104	34.8
WP_011838174.1\|1982359_1982566_+	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	1.1e-20	75.0
WP_011838186.1\|1983045_1984198_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_011838175.1\|1984292_1985645_+	potassium transporter TrkH	NA	NA	NA	NA
WP_011838176.1\|1985655_1986309_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_003512006.1\|1987730_1988678_-\|transposase	IS982-like element ISCth1 family transposase	NA	NA	NA	NA
WP_011838186.1\|1988982_1990135_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_011838177.1\|1990390_1990819_-	RidA family protein	NA	NA	NA	NA
WP_034839221.1\|1990972_1991686_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_011838179.1\|1991678_1992521_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_003512006.1\|1992712_1993660_+\|transposase	IS982-like element ISCth1 family transposase	NA	NA	NA	NA
WP_011838180.1\|1993827_1994544_-	ABC transporter permease	NA	NA	NA	NA
WP_011838181.1\|1994545_1995250_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-27	31.3
WP_148206048.1\|1995390_1995627_+	hypothetical protein	NA	NA	NA	NA
WP_080514912.1\|1995512_1996121_+	recombinase zinc beta ribbon domain-containing protein	A0A2K5B2B2	Erysipelothrix_phage	2.5e-36	37.6
WP_011838183.1\|1996121_1996553_+	recombinase	NA	NA	NA	NA
WP_011838184.1\|1996539_1998108_+	recombinase family protein	A0A2K5B2B4	Erysipelothrix_phage	4.9e-161	56.9
WP_011838185.1\|1998189_1998786_-	DUF998 domain-containing protein	NA	NA	NA	NA
WP_011838186.1\|1999177_2000329_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
2000661:2000720	attL	NA	NA	NA	NA
WP_011838186.1\|2000719_2001871_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_141695943.1\|2002396_2002882_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_041734284.1\|2003275_2003461_-	hypothetical protein	NA	NA	NA	NA
WP_011838188.1\|2003457_2004093_-	Vat family streptogramin A O-acetyltransferase	A0A1V0SJ47	Klosneuvirus	2.4e-13	31.4
WP_011838189.1\|2004151_2004883_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	7.1e-70	50.8
WP_011838190.1\|2004914_2005760_-	nucleotidyltransferase domain-containing protein	A0A1X9I6C9	Streptococcus_phage	7.9e-81	50.4
WP_080514913.1\|2006329_2006545_-\|transposase	transposase	NA	NA	NA	NA
WP_080514935.1\|2006581_2006881_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_011838186.1\|2007000_2008152_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_011838191.1\|2008355_2008961_-\|transposase	transposase	NA	NA	NA	NA
WP_011838192.1\|2009035_2010760_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-45	28.4
WP_011838186.1\|2010945_2012097_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_011838193.1\|2012329_2013310_-	radical SAM protein	NA	NA	NA	NA
WP_011838194.1\|2013319_2014165_-	PqqD family protein	NA	NA	NA	NA
WP_011838195.1\|2014167_2015160_-	radical SAM protein	NA	NA	NA	NA
WP_011838186.1\|2015422_2016575_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
2016575:2018022	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2025971 : 2062706

Streptococcus_phage(18.52%)

portal,tail,head,holin,transposase,protease,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011838206.1\|2025971_2026382_-\|holin	phage holin family protein	A0A2K5B2A2	Erysipelothrix_phage	1.6e-42	61.9
WP_011838207.1\|2026398_2028087_-	hypothetical protein	Q0H227	Geobacillus_phage	1.7e-13	36.6
WP_011838208.1\|2028098_2029256_-	hypothetical protein	NA	NA	NA	NA
WP_011838209.1\|2029268_2031173_-\|tail	phage tail protein	A0A0A7RUI9	Clostridium_phage	5.8e-47	40.8
WP_011838210.1\|2031172_2031877_-\|tail	phage tail family protein	A0A141E160	Streptococcus_phage	2.9e-12	29.0
WP_011838211.1\|2031876_2034156_-\|tail	phage tail tape measure protein	M4QNS0	Tetraselmis_viridis_virus	1.4e-31	33.3
WP_011838212.1\|2034365_2034689_-	hypothetical protein	NA	NA	NA	NA
WP_035381367.1\|2034817_2035258_-	DUF4275 family protein	NA	NA	NA	NA
WP_080514936.1\|2035317_2035566_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_011837761.1\|2035655_2036768_-\|transposase	IS30-like element ISCth2 family transposase	H7BWC8	unidentified_phage	2.1e-89	53.1
WP_011838214.1\|2037022_2037595_-\|tail	tail protein	A0A1L2BYA0	Clostridium_phage	6.1e-53	57.9
WP_011838215.1\|2037597_2037927_-	hypothetical protein	A0A0S2SY15	Bacillus_phage	1.5e-16	46.7
WP_011838216.1\|2037923_2038316_-	HK97 gp10 family phage protein	A0A2H4J368	uncultured_Caudovirales_phage	3.8e-14	34.8
WP_011838217.1\|2038308_2038635_-\|head	phage head closure protein	A0A2H4J220	uncultured_Caudovirales_phage	1.5e-11	42.4
WP_011838218.1\|2038631_2039204_-\|head,tail	phage head-tail connector protein	C7BGH1	Burkholderia_phage	2.7e-08	25.9
WP_127837226.1\|2039245_2039689_-	hypothetical protein	NA	NA	NA	NA
WP_011838220.1\|2039698_2040988_-\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_011838221.1\|2041015_2041759_-\|protease	Clp protease ClpP	A6M950	Geobacillus_virus	2.0e-64	54.3
WP_011838222.1\|2041763_2043023_-\|portal	phage portal protein	Q8HAD4	Salmonella_phage	1.9e-70	40.2
WP_167524728.1\|2043034_2045632_-\|terminase	terminase	A0A2K5B285	Erysipelothrix_phage	5.7e-21	66.7
WP_011838224.1\|2045576_2046059_-\|terminase	phage terminase small subunit P27 family	Q6DMU4	Streptococcus_phage	4.7e-62	74.3
WP_041734294.1\|2046117_2046333_-	hypothetical protein	NA	NA	NA	NA
WP_011838225.1\|2046325_2047078_-	hypothetical protein	NA	NA	NA	NA
WP_011838226.1\|2047191_2047503_-	hypothetical protein	NA	NA	NA	NA
WP_011838227.1\|2047573_2048053_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_011838228.1\|2048197_2049121_-	amidoligase family protein	A0A2K9V489	Faecalibacterium_phage	1.4e-46	41.2
WP_080514914.1\|2049220_2050681_-	DNA (cytosine-5-)-methyltransferase	A0A1X9I6A7	Streptococcus_phage	9.6e-143	53.8
WP_011838230.1\|2050673_2051909_-	DNA modification methylase	E4ZFL4	Streptococcus_phage	7.8e-162	66.2
WP_011838231.1\|2051913_2052339_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	4.6e-29	46.5
WP_011838232.1\|2052751_2053132_-	HNH endonuclease	Q38456	Bacillus_phage	1.6e-28	51.3
WP_020458081.1\|2053312_2053558_-	hypothetical protein	NA	NA	NA	NA
WP_011838233.1\|2053626_2054031_-	DUF1492 domain-containing protein	A0A2K5B275	Erysipelothrix_phage	1.2e-13	34.3
WP_011838234.1\|2054032_2054335_-	hypothetical protein	NA	NA	NA	NA
WP_011838235.1\|2054532_2056407_-	DNA primase family protein	H7BVJ4	unidentified_phage	5.8e-185	51.6
WP_041734476.1\|2056607_2058296_-	DNA polymerase	A0A2H4J041	uncultured_Caudovirales_phage	4.7e-186	55.5
WP_011838237.1\|2058301_2058760_-	DUF669 domain-containing protein	A0A2H4J1S8	uncultured_Caudovirales_phage	6.9e-39	51.3
WP_011838238.1\|2058778_2060371_-	AAA family ATPase	A0A1B1P7N0	Bacillus_phage	1.3e-137	50.8
WP_011838239.1\|2060292_2060658_-	VRR-NUC domain-containing protein	A0A2H4J095	uncultured_Caudovirales_phage	1.6e-22	50.5
WP_011838241.1\|2061941_2062706_-	hypothetical protein	Q4ZCB0	Staphylococcus_virus	2.7e-48	42.1

DBSCAN-SWA_7

2224042 : 2239013

uncultured_virus(33.33%)

integrase,transposase

attL 2216974:2216988|attR 2241928:2241942

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2216974:2216988	attL	NA	NA	NA	NA
WP_080514916.1\|2224042_2225527_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_003512622.1\|2225682_2226906_-\|transposase	IS256-like element ISCth4 family transposase	A0A218MNI5	uncultured_virus	1.3e-47	47.1
WP_011838280.1\|2226952_2227729_-	hypothetical protein	NA	NA	NA	NA
WP_011838281.1\|2227715_2228570_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_014253649.1\|2228928_2229120_+	hypothetical protein	NA	NA	NA	NA
WP_011838282.1\|2229187_2230057_-	hypothetical protein	NA	NA	NA	NA
WP_011838283.1\|2230053_2230848_-	hypothetical protein	NA	NA	NA	NA
WP_011838284.1\|2230861_2231236_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011838186.1\|2231418_2232570_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_041734481.1\|2232850_2233132_-	hypothetical protein	NA	NA	NA	NA
WP_020458084.1\|2233484_2233712_-	hypothetical protein	NA	NA	NA	NA
WP_011838286.1\|2234191_2236258_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_011838287.1\|2236697_2237987_-\|transposase	IS110-like element ISCth8 family transposase	A0A0U3ULR1	Bacillus_phage	2.0e-35	28.9
WP_041734304.1\|2238440_2239013_+\|integrase	phage integrase N-terminal SAM-like domain-containing protein	NA	NA	NA	NA
2241928:2241942	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2356640 : 2460095

Enterobacteria_phage(26.67%)

tRNA,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011838186.1\|2356640_2357792_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_020457675.1\|2357995_2358322_-	hypothetical protein	NA	NA	NA	NA
WP_003518419.1\|2358380_2358626_-	hypothetical protein	NA	NA	NA	NA
WP_041734319.1\|2360354_2361161_-	bifunctional DNA primase/polymerase	A0A2H4UW41	Bodo_saltans_virus	1.1e-10	33.9
WP_003513997.1\|2361285_2361423_-	hypothetical protein	NA	NA	NA	NA
WP_003513999.1\|2361415_2361805_-	hypothetical protein	NA	NA	NA	NA
WP_003514003.1\|2362024_2362267_-	hypothetical protein	NA	NA	NA	NA
WP_049756136.1\|2362282_2362504_-	hypothetical protein	NA	NA	NA	NA
WP_020457677.1\|2362635_2363820_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_041734483.1\|2364245_2364548_-	hypothetical protein	NA	NA	NA	NA
WP_049756138.1\|2366419_2368579_-	bifunctional DNA primase/polymerase	D6R422	Bacillus_phage	2.2e-95	44.2
WP_003514970.1\|2368699_2368837_-	hypothetical protein	NA	NA	NA	NA
WP_041734321.1\|2368829_2369219_-	hypothetical protein	NA	NA	NA	NA
WP_003514026.1\|2369413_2369692_-	hypothetical protein	NA	NA	NA	NA
WP_003514015.1\|2371522_2371870_-	hypothetical protein	NA	NA	NA	NA
WP_011838186.1\|2373482_2374634_+\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_011837913.1\|2375283_2376798_+\|transposase	IS21-like element ISCth12 family transposase	NA	NA	NA	NA
WP_003512270.1\|2376791_2377517_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	5.4e-30	35.4
WP_003511744.1\|2378815_2379886_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7
WP_011838186.1\|2380862_2382015_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_003515213.1\|2382105_2382582_-	hypothetical protein	NA	NA	NA	NA
WP_003515210.1\|2382627_2382822_-	hypothetical protein	NA	NA	NA	NA
WP_020457682.1\|2383681_2385166_+\|transposase	IS21-like element ISCth9 family transposase	NA	NA	NA	NA
WP_020457683.1\|2385165_2385924_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.1e-45	39.7
WP_020457684.1\|2387413_2387932_-	hypothetical protein	NA	NA	NA	NA
WP_003514068.1\|2388910_2390149_-	DUF1910 domain-containing protein	NA	NA	NA	NA
WP_011838186.1\|2391318_2392471_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_003514070.1\|2393380_2393764_-	hypothetical protein	NA	NA	NA	NA
WP_023062624.1\|2394410_2394554_-	hypothetical protein	NA	NA	NA	NA
WP_003512473.1\|2395007_2396228_+\|transposase	IS256-like element ISCth5 family transposase	A0A220NQR7	Corynebacterium_phage	5.6e-96	49.0
WP_020457685.1\|2396458_2397694_-	DUF1910 domain-containing protein	NA	NA	NA	NA
WP_020457686.1\|2397726_2399574_-	hypothetical protein	NA	NA	NA	NA
WP_041734327.1\|2400021_2400828_-	bifunctional DNA primase/polymerase	A0A286QQG9	Streptococcus_phage	1.6e-14	26.7
WP_003519487.1\|2400952_2401093_-	hypothetical protein	NA	NA	NA	NA
WP_041734328.1\|2401082_2401472_-	hypothetical protein	NA	NA	NA	NA
WP_003514026.1\|2401666_2401945_-	hypothetical protein	NA	NA	NA	NA
WP_158303342.1\|2401978_2402119_-	hypothetical protein	NA	NA	NA	NA
WP_020457688.1\|2402348_2403539_-\|transposase	IS110-like element ISCth14 family transposase	NA	NA	NA	NA
WP_003514975.1\|2404024_2404582_-	recombinase family protein	NA	NA	NA	NA
WP_003514976.1\|2404848_2405199_-	hypothetical protein	NA	NA	NA	NA
WP_003514061.1\|2405947_2406751_-	hypothetical protein	NA	NA	NA	NA
WP_020457689.1\|2406777_2408454_-	hypothetical protein	NA	NA	NA	NA
WP_003513861.1\|2408633_2409110_-\|transposase	IS200/IS605-like element ISCth10 family transposase	A0A1P8BMC0	Lactococcus_phage	4.1e-18	38.6
WP_020457690.1\|2409328_2415343_-	hypothetical protein	NA	NA	NA	NA
WP_003514077.1\|2415445_2415760_-	hypothetical protein	NA	NA	NA	NA
WP_020457691.1\|2415756_2417640_-	protein kinase	NA	NA	NA	NA
WP_080514919.1\|2418194_2418449_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_037295074.1\|2418436_2418715_-	hypothetical protein	NA	NA	NA	NA
WP_020457693.1\|2421510_2423934_-	dockerin	NA	NA	NA	NA
WP_020457694.1\|2424457_2428213_-	helicase-exonuclease AddAB subunit AddA	G3MA40	Bacillus_virus	9.7e-14	23.2
WP_003514090.1\|2428241_2431682_-	helicase-exonuclease AddAB subunit AddB	NA	NA	NA	NA
WP_003514092.1\|2431799_2432246_-	hypothetical protein	NA	NA	NA	NA
WP_020457696.1\|2433679_2434282_-	hypothetical protein	NA	NA	NA	NA
WP_003514095.1\|2436336_2436849_-	hypothetical protein	NA	NA	NA	NA
WP_020457697.1\|2436870_2438571_-	HNH endonuclease	NA	NA	NA	NA
WP_003516789.1\|2438747_2439275_-	hypothetical protein	NA	NA	NA	NA
WP_080514921.1\|2439316_2440222_-	hypothetical protein	NA	NA	NA	NA
WP_003516785.1\|2440184_2441024_-	CRISPR-associated RAMP protein	NA	NA	NA	NA
WP_003514102.1\|2441016_2441799_-	CRISPR-associated RAMP protein	NA	NA	NA	NA
WP_003514104.1\|2441829_2442222_-	hypothetical protein	NA	NA	NA	NA
WP_003514106.1\|2442223_2443471_-	hypothetical protein	NA	NA	NA	NA
WP_003514108.1\|2443455_2444001_-	hypothetical protein	NA	NA	NA	NA
WP_003514110.1\|2444006_2445926_-	hypothetical protein	NA	NA	NA	NA
WP_003514112.1\|2445933_2446875_-	hypothetical protein	NA	NA	NA	NA
WP_003514114.1\|2446981_2448814_-	TIGR02221 family CRISPR-associated protein	NA	NA	NA	NA
WP_003514117.1\|2449202_2449730_-	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	1.9e-40	61.7
WP_003514120.1\|2450390_2451035_-	RNA polymerase sporulation sigma factor SigH	NA	NA	NA	NA
WP_003514124.1\|2451336_2452170_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_003514126.1\|2452320_2452743_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_003514128.1\|2452929_2454465_+	spore germination protein	NA	NA	NA	NA
WP_020457700.1\|2454454_2455576_+	GerAB/ArcD/ProY family transporter	NA	NA	NA	NA
WP_020457701.1\|2455559_2456831_+	Ger(x)C family spore germination protein	NA	NA	NA	NA
WP_003514134.1\|2456919_2458326_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	7.8e-49	30.6
WP_003516780.1\|2458312_2459059_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_003514136.1\|2459687_2460095_+\|holin	phage holin family protein	NA	NA	NA	NA

DBSCAN-SWA_9

2533914 : 2606886

unidentified_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011838186.1\|2533914_2535067_-\|transposase	IS3-like element IS120 family transposase	Q6H9S6	Enterobacteria_phage	3.1e-19	30.0
WP_020457717.1\|2535140_2537513_+	carbohydrate-binding protein	NA	NA	NA	NA
WP_003520229.1\|2537842_2539585_+	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_020457718.1\|2539644_2542593_+	AbfB domain-containing protein	NA	NA	NA	NA
WP_003516691.1\|2542822_2544145_-	DUF4830 domain-containing protein	NA	NA	NA	NA
WP_003514254.1\|2544296_2544491_-	hypothetical protein	NA	NA	NA	NA
WP_003514256.1\|2544544_2545732_-	HD domain-containing protein	NA	NA	NA	NA
WP_003514291.1\|2546254_2546854_-	recombination protein RecR	NA	NA	NA	NA
WP_003514292.1\|2546885_2547227_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_020457719.1\|2547343_2548987_-	DNA polymerase III subunit gamma/tau	E7DN81	Pneumococcus_phage	4.2e-54	36.9
WP_041734346.1\|2549982_2550264_+	hypothetical protein	NA	NA	NA	NA
WP_041734348.1\|2550227_2550950_+	hypothetical protein	NA	NA	NA	NA
WP_003516880.1\|2550951_2551293_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_020457720.1\|2551538_2553521_+	cellulase family glycosylhydrolase	H2DE45	Erwinia_phage	8.1e-44	29.1
WP_003516878.1\|2553635_2554400_-	carbohydrate binding domain-containing protein	NA	NA	NA	NA
WP_003516877.1\|2554447_2555737_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003516876.1\|2555781_2557128_-	hypothetical protein	NA	NA	NA	NA
WP_041734349.1\|2557229_2559599_-	hypothetical protein	NA	NA	NA	NA
WP_003515176.1\|2559647_2560166_-	GtrA family protein	NA	NA	NA	NA
WP_003511744.1\|2560521_2561592_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7
WP_020457722.1\|2561860_2562736_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003516873.1\|2562994_2564890_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_003515182.1\|2564949_2565228_-	hypothetical protein	NA	NA	NA	NA
WP_020457723.1\|2565281_2565614_-	hypothetical protein	NA	NA	NA	NA
WP_020457724.1\|2567577_2568438_-	carbohydrate-binding domain-containing protein	NA	NA	NA	NA
WP_020457725.1\|2568489_2570883_-	CotH kinase family protein	NA	NA	NA	NA
WP_003515065.1\|2571194_2571353_-	hypothetical protein	NA	NA	NA	NA
WP_020458085.1\|2571651_2571774_-	cyclic lactone autoinducer peptide	NA	NA	NA	NA
WP_020457726.1\|2571865_2572747_-	hypothetical protein	NA	NA	NA	NA
WP_020457727.1\|2572919_2573636_-	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_003515069.1\|2573865_2574201_-	STAS domain-containing protein	NA	NA	NA	NA
WP_003515070.1\|2574675_2574816_+	hypothetical protein	NA	NA	NA	NA
WP_003515071.1\|2574876_2575035_-	rubredoxin	NA	NA	NA	NA
WP_003516868.1\|2575186_2575780_-\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	6.0e-19	45.8
WP_003516867.1\|2576032_2577169_+	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_003516866.1\|2577169_2578312_-	glycoside hydrolase	NA	NA	NA	NA
WP_003515075.1\|2578457_2580653_-	peptidase M4	NA	NA	NA	NA
WP_003515076.1\|2580771_2581593_-	metallophosphoesterase	NA	NA	NA	NA
WP_003516865.1\|2581756_2582866_+	amidase domain-containing protein	NA	NA	NA	NA
WP_020457728.1\|2582902_2585872_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_003516863.1\|2586067_2586271_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_011837761.1\|2586511_2587624_-\|transposase	IS30-like element ISCth2 family transposase	H7BWC8	unidentified_phage	2.1e-89	53.1
WP_020457730.1\|2587648_2589610_-	transcription termination factor Rho	NA	NA	NA	NA
WP_003513709.1\|2590125_2590794_-	hypothetical protein	NA	NA	NA	NA
WP_020457731.1\|2591106_2591985_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003513706.1\|2592106_2592304_+	hypothetical protein	NA	NA	NA	NA
WP_003513703.1\|2592429_2592891_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_020457732.1\|2593347_2596116_-	pectate lyase	A0A076FFT1	Aureococcus_anophage	2.2e-18	33.0
WP_041734352.1\|2596979_2598278_+	chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.1e-73	43.3
WP_014522658.1\|2598691_2599405_+	hypothetical protein	A0A0U2S5Z2	Escherichia_phage	6.7e-33	37.7
WP_003513693.1\|2599445_2602235_+	phosphodiester glycosidase family protein	NA	NA	NA	NA
WP_020457734.1\|2602442_2603312_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.1e-85	54.1
WP_003513688.1\|2603533_2604364_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_003513685.1\|2604433_2604718_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_003513683.1\|2604783_2605200_-	single-stranded DNA-binding protein	S5MNH0	Brevibacillus_phage	1.1e-27	46.0
WP_003513680.1\|2605209_2605497_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_003511744.1\|2605815_2606886_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7

DBSCAN-SWA_10

2931282 : 2966457

Clostridium_phage(21.21%)

portal,tail,plate,transposase,capsid,terminase,integrase

attL 2931143:2931196|attR 2968318:2968371

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2931143:2931196	attL	NA	NA	NA	NA
WP_020457800.1\|2931282_2932395_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	2.8e-78	45.4
WP_020457801.1\|2932452_2932875_-	TIR domain-containing protein	NA	NA	NA	NA
WP_041734518.1\|2932962_2933160_+	hypothetical protein	A0A1J0MFE5	Staphylococcus_phage	7.8e-16	61.3
WP_020457803.1\|2933135_2933600_-	DUF4231 domain-containing protein	A0A0S2MYH2	Enterococcus_phage	2.0e-17	35.9
WP_020457804.1\|2933629_2934070_-	ImmA/IrrE family metallo-endopeptidase	Q9T201	Bacillus_phage	4.8e-21	41.1
WP_020457805.1\|2934085_2934514_-	helix-turn-helix transcriptional regulator	A0A1L2JY18	Aeribacillus_phage	3.7e-10	38.9
WP_020457806.1\|2934641_2934881_+	helix-turn-helix transcriptional regulator	A0A290G4F8	Caldibacillus_phage	1.2e-05	37.8
WP_020457807.1\|2934899_2935646_+	phage antirepressor KilAC domain-containing protein	A0A290FZK7	Caldibacillus_phage	1.1e-46	40.8
WP_041734369.1\|2935648_2935867_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_020458092.1\|2935962_2936175_+	hypothetical protein	NA	NA	NA	NA
WP_020458093.1\|2936161_2936335_+	hypothetical protein	NA	NA	NA	NA
WP_020458094.1\|2936350_2936569_+	hypothetical protein	NA	NA	NA	NA
WP_020457809.1\|2936561_2937113_+	host-nuclease inhibitor Gam family protein	A0A0K2CZ48	Paenibacillus_phage	1.6e-29	39.3
WP_041734523.1\|2937128_2938019_+	hypothetical protein	A6M982	Geobacillus_virus	8.9e-67	51.5
WP_148206050.1\|2938210_2938396_+	hypothetical protein	NA	NA	NA	NA
WP_020458096.1\|2938385_2938574_+	hypothetical protein	NA	NA	NA	NA
WP_020457811.1\|2938590_2939673_+	hypothetical protein	H7BWC5	unidentified_phage	2.5e-23	52.7
WP_020457812.1\|2939669_2940506_+	ATP-binding protein	H7BWC4	unidentified_phage	2.1e-57	45.4
WP_020457813.1\|2940507_2940882_+	hypothetical protein	A0A1B1IPD8	uncultured_Mediterranean_phage	2.4e-13	44.7
WP_020457814.1\|2940929_2941352_+	DUF1492 domain-containing protein	I3VYX3	Thermoanaerobacterium_phage	1.9e-11	31.9
WP_020457815.1\|2941810_2942653_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	2.9e-75	51.8
WP_041734531.1\|2942681_2943926_+	transcriptional regulator	NA	NA	NA	NA
WP_020457817.1\|2944118_2944964_+	hypothetical protein	A0A0S2MYE5	Enterococcus_phage	5.7e-47	43.9
WP_020458098.1\|2945033_2945183_+	hypothetical protein	NA	NA	NA	NA
WP_020457818.1\|2945215_2945665_+\|terminase	terminase small subunit	A0A0M4RU19	Bacillus_phage	2.2e-37	60.5
WP_041734371.1\|2945651_2946899_+\|terminase	PBSX family phage terminase large subunit	B6CXD2	Clostridium_phage	2.1e-122	52.6
WP_020457820.1\|2946914_2948348_+\|portal	phage portal protein	A0A0A7S074	Clostridium_phage	6.8e-117	46.3
WP_158303343.1\|2948344_2948494_+	hypothetical protein	NA	NA	NA	NA
WP_020457821.1\|2948504_2949914_+\|capsid	minor capsid protein	S6B1L4	Thermus_phage	3.6e-70	34.9
WP_020457822.1\|2949910_2950117_+	hypothetical protein	NA	NA	NA	NA
WP_037295857.1\|2950283_2950847_+	phage scaffolding protein	S5MUG0	Brevibacillus_phage	7.5e-11	32.2
WP_020457824.1\|2950865_2951789_+	hypothetical protein	A0A1V0DZW0	Clostridioides_phage	7.5e-93	57.1
WP_167524727.1\|2951801_2951948_+	hypothetical protein	NA	NA	NA	NA
WP_041734373.1\|2951988_2952327_+	bacteriophage QLRG family, DNA packaging	NA	NA	NA	NA
WP_020457826.1\|2952323_2952659_+	hypothetical protein	A0A0A7S083	Clostridium_phage	3.0e-07	38.1
WP_020457827.1\|2952655_2953066_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_020457828.1\|2953055_2953475_+	hypothetical protein	NA	NA	NA	NA
WP_011838287.1\|2953637_2954927_-\|transposase	IS110-like element ISCth8 family transposase	A0A0U3ULR1	Bacillus_phage	2.0e-35	28.9
WP_020457829.1\|2955378_2956425_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	1.3e-53	34.0
WP_020457830.1\|2956445_2956922_+\|tail	phage tail tube protein	S5MA61	Brevibacillus_phage	4.8e-19	37.3
WP_020457831.1\|2956938_2957352_+\|portal	phage portal protein	Q20DC6	Lactobacillus_phage	5.5e-11	40.8
WP_020457832.1\|2957544_2959380_+	tape measure protein	S6AVU8	Thermus_phage	9.4e-71	36.1
WP_148206056.1\|2959517_2960036_+	LysM peptidoglycan-binding domain-containing protein	A0A0A7RVP5	Clostridium_phage	2.8e-28	44.1
WP_041734533.1\|2960038_2960977_+	hypothetical protein	H7BWD8	unidentified_phage	3.0e-57	37.3
WP_020457835.1\|2961203_2961599_+	DUF2634 domain-containing protein	A0A0A7RTH1	Clostridium_phage	5.0e-30	53.6
WP_020457836.1\|2961598_2962657_+\|plate	baseplate J/gp47 family protein	X5JAB8	Clostridium_phage	4.2e-63	38.5
WP_020457837.1\|2962646_2963249_+	YmfQ family protein	A0A0K2CNM8	Brevibacillus_phage	4.1e-15	33.5
WP_158303344.1\|2963345_2963543_+	hypothetical protein	NA	NA	NA	NA
WP_020457839.1\|2963545_2964928_+	SBBP repeat-containing protein	NA	NA	NA	NA
WP_020457840.1\|2964932_2965253_+	hypothetical protein	NA	NA	NA	NA
WP_020458100.1\|2965253_2965406_+	XkdX family protein	NA	NA	NA	NA
WP_007515979.1\|2965494_2965785_+	hypothetical protein	NA	NA	NA	NA
WP_041734377.1\|2965791_2966457_+	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	2.8e-33	46.7
2968318:2968371	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3204695 : 3273547

unidentified_phage(10.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003511744.1\|3204695_3205766_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7
WP_011837761.1\|3205862_3206975_+\|transposase	IS30-like element ISCth2 family transposase	H7BWC8	unidentified_phage	2.1e-89	53.1
WP_003515024.1\|3207217_3207367_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_003515023.1\|3207455_3207698_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_003515022.1\|3207753_3208287_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.2e-10	32.9
WP_003515021.1\|3208428_3208854_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_003515020.1\|3208954_3209650_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_003515019.1\|3209922_3210459_+	50S ribosomal protein L10	NA	NA	NA	NA
WP_003515018.1\|3210546_3210936_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_020457900.1\|3211434_3215187_+	DNA-directed RNA polymerase subunit beta	A0A2P0VMZ3	Tetraselmis_virus	1.3e-37	25.8
WP_020457901.1\|3215204_3218702_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	2.7e-66	25.7
WP_003514302.1\|3218843_3219083_+	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA
WP_003514304.1\|3219170_3219599_+	30S ribosomal protein S12	NA	NA	NA	NA
WP_003514305.1\|3219778_3220249_+	30S ribosomal protein S7	NA	NA	NA	NA
WP_003515361.1\|3220321_3222415_+	elongation factor G	E4ZFJ7	Streptococcus_phage	2.5e-59	25.9
WP_020457902.1\|3222530_3223733_+	elongation factor Tu	A0A2K9L516	Tupanvirus	4.3e-16	26.3
WP_003514311.1\|3224038_3224593_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_003514312.1\|3224589_3225192_+	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_003514313.1\|3225302_3225677_+	hypothetical protein	NA	NA	NA	NA
WP_003515357.1\|3225713_3226553_+	VanW family protein	NA	NA	NA	NA
WP_003514315.1\|3226728_3226998_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_003515355.1\|3227001_3228756_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_003514317.1\|3228761_3230639_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003514320.1\|3230645_3231353_+	metallophosphoesterase	NA	NA	NA	NA
WP_003514322.1\|3231570_3232857_+	trigger factor	NA	NA	NA	NA
WP_003514324.1\|3232926_3233511_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.3e-53	55.2
WP_003514326.1\|3233524_3234820_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.9e-150	62.7
WP_003514329.1\|3235054_3236731_+\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	1.1e-17	38.0
WP_003514331.1\|3236942_3237962_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	S4VW33	Pandoravirus	1.4e-36	33.6
WP_003514333.1\|3238675_3239362_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.8e-38	64.7
WP_003514336.1\|3239578_3239902_-	hypothetical protein	NA	NA	NA	NA
WP_003514338.1\|3240237_3240708_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_003514339.1\|3240767_3241616_+	phosphatase	NA	NA	NA	NA
WP_003514341.1\|3241795_3242260_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.6e-41	55.6
WP_003514372.1\|3242780_3242960_+	hypothetical protein	NA	NA	NA	NA
WP_020457904.1\|3243870_3245376_+\|transposase	IS21-like element ISCth15 family transposase	NA	NA	NA	NA
WP_020457905.1\|3245368_3246094_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.2e-37	42.5
WP_003515349.1\|3247109_3247283_+	hypothetical protein	NA	NA	NA	NA
WP_020457907.1\|3247669_3249001_+	MBL fold metallo-hydrolase	Q332B9	Clostridium_botulinum_C_phage	1.5e-86	43.8
WP_003514376.1\|3249011_3249224_+	DUF3006 domain-containing protein	NA	NA	NA	NA
WP_003514377.1\|3249318_3250035_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_020457908.1\|3250073_3250895_+	ADP-ribosylglycohydrolase family protein	A0A1J0FA18	Only_Syngen_Nebraska_virus	6.0e-09	26.5
WP_020457909.1\|3251705_3253322_+	potassium/proton antiporter	NA	NA	NA	NA
WP_003514381.1\|3253725_3254604_+	AraC family transcriptional regulator	D0R0F8	Streptococcus_phage	1.2e-31	31.6
WP_020457910.1\|3255100_3257986_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_020457911.1\|3258150_3260274_+	glycoside hydrolase family 9 protein	NA	NA	NA	NA
WP_003514384.1\|3260723_3262061_+	WYL domain-containing protein	NA	NA	NA	NA
WP_020457912.1\|3262044_3263097_+	WYL domain-containing protein	NA	NA	NA	NA
WP_020457913.1\|3263551_3265015_+	TROVE domain-containing protein	K4JRQ9	Caulobacter_phage	2.1e-41	33.3
WP_003515337.1\|3265026_3266607_+	hypothetical protein	NA	NA	NA	NA
WP_023062832.1\|3266619_3266859_+	hypothetical protein	NA	NA	NA	NA
WP_020457915.1\|3266984_3268382_+	3' terminal RNA ribose 2'-O-methyltransferase Hen1	NA	NA	NA	NA
WP_020457916.1\|3268378_3270991_+	polynucleotide kinase-phosphatase	A0A1V0SJW2	Klosneuvirus	4.1e-35	22.2
WP_003515331.1\|3271106_3271808_-	iron-sulfur cluster repair di-iron protein	NA	NA	NA	NA
WP_003511763.1\|3272257_3273547_+\|transposase	IS110-like element ISCth8 family transposase	A0A0U3ULR1	Bacillus_phage	2.0e-35	28.9

DBSCAN-SWA_12

3324050 : 3389049

Bacillus_phage(28.57%)

tRNA,capsid,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003515275.1\|3324050_3325652_-\|tRNA	lysine--tRNA ligase	NA	NA	NA	NA
WP_003512473.1\|3325991_3327212_-\|transposase	IS256-like element ISCth5 family transposase	A0A220NQR7	Corynebacterium_phage	5.6e-96	49.0
WP_003514493.1\|3328546_3328972_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_003514496.1\|3328987_3330796_+	chemotaxis protein CheA	NA	NA	NA	NA
WP_003518813.1\|3330829_3335254_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-17	45.0
WP_003514500.1\|3335366_3336200_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_003514503.1\|3336178_3337273_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_003514505.1\|3337477_3338464_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003514509.1\|3339489_3339627_+	hypothetical protein	NA	NA	NA	NA
WP_041734393.1\|3339747_3340554_+	bifunctional DNA primase/polymerase	A0A286QQG9	Streptococcus_phage	3.9e-13	26.4
WP_158303345.1\|3340629_3340803_+	hypothetical protein	NA	NA	NA	NA
WP_020457931.1\|3340945_3342793_+	hypothetical protein	NA	NA	NA	NA
WP_020457932.1\|3342815_3344054_+	DUF1911 domain-containing protein	NA	NA	NA	NA
WP_020457933.1\|3344803_3345274_+	hypothetical protein	NA	NA	NA	NA
WP_020457683.1\|3346044_3346803_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.1e-45	39.7
WP_020457682.1\|3346802_3348287_-\|transposase	IS21-like element ISCth9 family transposase	NA	NA	NA	NA
WP_003514015.1\|3349681_3350029_+	hypothetical protein	NA	NA	NA	NA
WP_003515094.1\|3351869_3352448_+	hypothetical protein	NA	NA	NA	NA
WP_020457937.1\|3352629_3353019_+	hypothetical protein	NA	NA	NA	NA
WP_003514012.1\|3353011_3353149_+	hypothetical protein	NA	NA	NA	NA
WP_020457938.1\|3354476_3356318_+	hypothetical protein	NA	NA	NA	NA
WP_020457939.1\|3356344_3357583_+	DUF1910 domain-containing protein	NA	NA	NA	NA
WP_041734397.1\|3358086_3358431_+	KilA-N domain-containing protein	NA	NA	NA	NA
WP_003515117.1\|3361684_3361972_+	hypothetical protein	NA	NA	NA	NA
WP_003515119.1\|3362169_3362559_+	hypothetical protein	NA	NA	NA	NA
WP_003515128.1\|3362548_3362689_+	hypothetical protein	NA	NA	NA	NA
WP_049756143.1\|3362815_3364975_+	bifunctional DNA primase/polymerase	D6R422	Bacillus_phage	4.9e-95	43.8
WP_020457942.1\|3365246_3366560_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_037296008.1\|3366785_3367121_+	hypothetical protein	NA	NA	NA	NA
WP_020457943.1\|3367448_3368705_+\|transposase	IS110-like element ISCth6 family transposase	NA	NA	NA	NA
WP_158303346.1\|3368984_3369125_+	hypothetical protein	NA	NA	NA	NA
WP_003515136.1\|3369137_3369425_+	hypothetical protein	NA	NA	NA	NA
WP_003514509.1\|3369929_3370067_+	hypothetical protein	NA	NA	NA	NA
WP_041734399.1\|3370187_3370994_+	bifunctional DNA primase/polymerase	A0A2H4UW41	Bodo_saltans_virus	2.5e-07	31.0
WP_020457944.1\|3371389_3373237_+	hypothetical protein	NA	NA	NA	NA
WP_020457945.1\|3373260_3374499_+	DUF1911 domain-containing protein	NA	NA	NA	NA
WP_003515088.1\|3374707_3375235_+	hypothetical protein	NA	NA	NA	NA
WP_003514981.1\|3375247_3375718_+	hypothetical protein	NA	NA	NA	NA
WP_041734401.1\|3377699_3378047_+	hypothetical protein	NA	NA	NA	NA
WP_167524725.1\|3378189_3378969_+	hypothetical protein	NA	NA	NA	NA
WP_167524729.1\|3379513_3379900_+	glycohydrolase toxin TNT-related protein	NA	NA	NA	NA
WP_020457947.1\|3379901_3380144_+	hypothetical protein	NA	NA	NA	NA
WP_020457948.1\|3380248_3380851_+	hypothetical protein	NA	NA	NA	NA
WP_158303347.1\|3381064_3382069_+	Hint domain-containing protein	NA	NA	NA	NA
WP_020458101.1\|3382075_3382312_+	hypothetical protein	NA	NA	NA	NA
WP_020457949.1\|3382429_3382819_+	hypothetical protein	NA	NA	NA	NA
WP_014254768.1\|3382811_3382949_+	hypothetical protein	NA	NA	NA	NA
WP_049756144.1\|3383069_3385229_+	bifunctional DNA primase/polymerase	D6R422	Bacillus_phage	5.5e-94	43.8
WP_020457951.1\|3385499_3386813_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_041734402.1\|3387104_3387440_+	hypothetical protein	NA	NA	NA	NA
WP_020457953.1\|3387792_3389049_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

3759641 : 3828682

unidentified_phage(42.86%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003511744.1\|3759641_3760712_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	6.1e-54	36.7
WP_011837761.1\|3760866_3761979_+\|transposase	IS30-like element ISCth2 family transposase	H7BWC8	unidentified_phage	2.1e-89	53.1
WP_020458045.1\|3762303_3763701_+	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_020458046.1\|3763747_3765199_+	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_049756145.1\|3765280_3766360_+\|tRNA	tRNA-guanine transglycosylase	NA	NA	NA	NA
WP_003511751.1\|3766431_3768183_+	B12-binding domain-containing radical SAM protein	NA	NA	NA	NA
WP_003511753.1\|3768204_3768627_-	ATP-binding protein	NA	NA	NA	NA
WP_003516105.1\|3768942_3770430_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_041734436.1\|3770579_3771281_+	hypothetical protein	NA	NA	NA	NA
WP_041734578.1\|3771314_3773456_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	2.7e-69	28.4
WP_003511777.1\|3773636_3774857_+	AAA family ATPase	NA	NA	NA	NA
WP_003511778.1\|3775000_3775630_-	hypothetical protein	NA	NA	NA	NA
WP_020458050.1\|3775853_3776564_+	zinc dependent phospholipase C family protein	NA	NA	NA	NA
WP_003511783.1\|3776836_3777487_-	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_020458051.1\|3777694_3778120_+	hypothetical protein	NA	NA	NA	NA
WP_020458052.1\|3778202_3779564_-	DUF1015 domain-containing protein	NA	NA	NA	NA
WP_003511789.1\|3779816_3780371_+	PRC-barrel domain-containing protein	NA	NA	NA	NA
WP_003511791.1\|3780375_3780561_+	YtxH domain-containing protein	NA	NA	NA	NA
WP_003511793.1\|3780748_3781798_+	AI-2E family transporter	NA	NA	NA	NA
WP_020458053.1\|3782068_3784711_+\|tRNA	alanine--tRNA ligase	A0A2K9L3D8	Tupanvirus	2.6e-66	36.3
WP_020458054.1\|3791467_3793309_+	TIGR02556 family CRISPR-associated protein	NA	NA	NA	NA
WP_003511798.1\|3793308_3794226_+	type I-B CRISPR-associated protein Cas7/Csh2	NA	NA	NA	NA
WP_003511800.1\|3794240_3794954_+	type I-B CRISPR-associated protein Cas5	NA	NA	NA	NA
WP_003511802.1\|3794967_3797370_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA
WP_020458055.1\|3797383_3798052_+	CRISPR-associated endonuclease Cas6	NA	NA	NA	NA
WP_004464084.1\|3798674_3799898_+\|transposase	IS256-like element ISCth4 family transposase	A0A218MNI5	uncultured_virus	1.3e-47	47.1
WP_020458056.1\|3800182_3801253_-\|transposase	IS30-like element ISCth3 family transposase	H7BUM7	unidentified_phage	2.1e-54	36.7
WP_003511809.1\|3802517_3803192_+	hypothetical protein	NA	NA	NA	NA
WP_003511811.1\|3803184_3804786_+	CRISPR-associated protein	NA	NA	NA	NA
WP_003511813.1\|3804782_3806114_+	hypothetical protein	NA	NA	NA	NA
WP_003511815.1\|3806120_3806486_+	hypothetical protein	NA	NA	NA	NA
WP_003511818.1\|3806500_3808486_+	TIGR03986 family CRISPR-associated RAMP protein	NA	NA	NA	NA
WP_003511822.1\|3808629_3809880_+	TIGR02221 family CRISPR-associated protein	NA	NA	NA	NA
WP_020458057.1\|3810125_3811349_+\|transposase	IS256-like element ISCth4 family transposase	A0A218MNI5	uncultured_virus	1.7e-47	47.1
WP_003511830.1\|3816439_3817435_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_003511834.1\|3817428_3817719_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_003511836.1\|3817693_3818308_+	CRISPR-associated protein Cas4	NA	NA	NA	NA
WP_003511839.1\|3818366_3818585_-	hypothetical protein	NA	NA	NA	NA
WP_003519516.1\|3818695_3818836_-	hypothetical protein	NA	NA	NA	NA
WP_020458059.1\|3819664_3820312_+	hypothetical protein	NA	NA	NA	NA
WP_020458060.1\|3820448_3821249_+	hypothetical protein	NA	NA	NA	NA
WP_003511843.1\|3821296_3821794_+	hypothetical protein	NA	NA	NA	NA
WP_003511844.1\|3822303_3823164_+	hypothetical protein	NA	NA	NA	NA
WP_003511856.1\|3823878_3824391_+	DUF5104 domain-containing protein	NA	NA	NA	NA
WP_003511858.1\|3824637_3825426_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_020458061.1\|3825604_3826408_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_003511862.1\|3826481_3827282_+	copper amine oxidase N-terminal domain-containing protein	NA	NA	NA	NA
WP_003519693.1\|3827464_3828682_+\|transposase	IS701-like element ISCth16 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_009012

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection