CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_008525	Pediococcus pentosaceus ATCC 25745, complete sequence	2 crisprs	cas3,DEDDh,WYL,DinG,csa3	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_008525_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008525_1

676780-676885

Orphan

Consensus_repeat	Method
TTAGCTCAGTTGGGAGAGCATCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_008525_1

>merge|NC_008525|1|676780-676885|CRISPRCasFinder
TTAGCTCAGTTGGGAGAGCATCTGCCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCGTTAGCTCAGTTGGTAGAGCATCTG

>NC_008525|1|1|676780-676885|CRISPRCasFinder
TTAGCTCAGTTGGGAGAGCATCTG	CCTTACAAGCAGGAGGTCACAGGTTCGAGCCCTGTATCCCCCATTATATTTTGAGCCG
TTAGCTCAGTTGGTAGAGCATCTG

Protein	Signature genes	Signature genes Name	Protein_function
NC_008525.1\|WP_002833898.1\|669124_670141_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NC_008525.1\|WP_002833744.1\|684322_684886_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377744
NC_008525.1\|WP_002833746.1\|685857_688275_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NC_008525.1\|WP_002833905.1\|661798_662161_+\|DUF1634-domain-containing-protein	unknown	unknown	gnl\|CDD\|377927
NC_008525.1\|WP_011673185.1\|682809_684276_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_008525.1\|WP_002833742.1\|681544_682735_+\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NC_008525.1\|WP_002833897.1\|670154_671189_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NC_008525.1\|WP_011673186.1\|684878_685511_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NC_008525.1\|WP_002833899.1\|667899_669075_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340844
NC_008525.1\|WP_002833900.1\|667036_667810_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NC_008525.1\|WP_002833902.1\|664973_665240_+\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NC_008525.1\|WP_011673183.1\|678837_680571_+\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
NC_008525.1\|WP_011673187.1\|688478_690164_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NC_008525.1\|WP_002833903.1\|664639_664828_+\|hypothetical-protein	unknown	unknown	unknown
NC_008525.1\|WP_002833749.1\|690914_691754_-\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|238576
NC_008525.1\|WP_011673182.1\|665239_666964_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NC_008525.1\|WP_041526957.1\|662215_664435_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NC_008525.1\|WP_011673184.1\|680640_681372_-\|hypothetical-protein	unknown	unknown	unknown
NC_008525.1\|WP_002833906.1\|660953_661799_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NC_008525.1\|WP_002833748.1\|690172_690892_+\|16S-rRNA-pseudouridine(516)-synthase	unknown	unknown	gnl\|CDD\|211327

Protein	Function_ID	Function_description	E-value
NC_008525.1\|WP_002833898.1\|669124_670141_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.79241e-34
NC_008525.1\|WP_011673187.1\|688478_690164_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.01369e-136
NC_008525.1\|WP_002833746.1\|685857_688275_+\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NC_008525.1\|WP_002833905.1\|661798_662161_+\|DUF1634-domain-containing-protein	gnl\|CDD\|377927	pfam07843, DUF1634, Protein of unknown function (DUF1634). This family contains many hypothetical bacterial and archaeal proteins. A few members of this family are annotated as being putative transmembrane proteins, and the region in question in fact contains many hydrophobic residues.	1.23608e-28
NC_008525.1\|WP_011673185.1\|682809_684276_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.50566e-64
NC_008525.1\|WP_002833744.1\|684322_684886_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	3.74975e-74
NC_008525.1\|WP_002833897.1\|670154_671189_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	8.50457e-33
NC_008525.1\|WP_011673186.1\|684878_685511_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.97509e-52
NC_008525.1\|WP_002833899.1\|667899_669075_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340844	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (EC 2.4.1.337, UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.	3.14908e-136
NC_008525.1\|WP_002833900.1\|667036_667810_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.25951e-24
NC_008525.1\|WP_002833902.1\|664973_665240_+\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	1.69391e-54
NC_008525.1\|WP_011673183.1\|678837_680571_+\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
NC_008525.1\|WP_002833749.1\|690914_691754_-\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	6.78853e-78
NC_008525.1\|WP_011673182.1\|665239_666964_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NC_008525.1\|WP_041526957.1\|662215_664435_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
NC_008525.1\|WP_002833742.1\|681544_682735_+\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NC_008525.1\|WP_002833906.1\|660953_661799_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.61547e-34
NC_008525.1\|WP_002833748.1\|690172_690892_+\|16S-rRNA-pseudouridine(516)-synthase	gnl\|CDD\|211327	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like. This group is comprised of eukaryotic and bacterial proteins similar to Escherichia coli RsuA. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E.coli RsuA makes psi516 in 16S RNA. Psi at this position is not generally conserved in other organisms.	3.21573e-88

>NC_008525.1|WP_002833897.1|670154_671189_+|flippase-like-domain-containing-protein
MSRRNKVVLAVMILAGIIIFGFSLRNVNLNQMARDVVHLNMWWLLVALGCIVLYLGLEAVATKMLIQSNGDRLSWRDAIRIPLIEQLFNGITPFSSGGQPAQLVALMQNGIEGGRASSVLLMKFVVFQSMVVINFIFSLLIGFQYLEEKIRFLSWFVLFGFLIHLAVIIGLLMIMYWHNFTKRLISAIFIPIKHFVSKERYTTWKVTLNEKVDSFYQESVRMKSQWRLLAKVALVTFLQLLFYYLIPYFILLALGKSDVNIVMVTCLHVLIFMVISLFPIPGGAGGAEYGFSVIFAQFVGNNSKLVLAMMIWRILTYYFGMFAGMVATVVKPHKVNRVKVVKNE
>NC_008525.1|WP_002833898.1|669124_670141_+|glycosyltransferase-family-4-protein
MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLPETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEVNNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNAADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEYSEDHLADIWLDFYSSLTK
>NC_008525.1|WP_002833899.1|667899_669075_+|glycosyltransferase-family-4-protein
MNIGLFTDTYFPQVSGVATSIKTLRDQLEKQGHQVYIFTTTDPKVDTNVYERNIFRFTSVPFVSFTDRRIAVSGFIRAAQLAKELNLDIVHTQTEFSLGWMGKFVAKSLKIPLIHTYHTMYEDYLHYVANGKLLKPYHVKQMTRAFCYHIDGIVAPSERVLDTIEGYGINVPIRVIPTGVNLEQYQKPNKRKQWREKLGYDESSPILLSLSRLAYEKNIQEVIDSFPAILKEVPNAQLLIVGDGPARTSLENQVHDLHLEDSVQFTGEINNDHVYGFYQLADLFVSASDTESQGLTYIEALASNLKVVAKSGPYTDELLDDISLGKVFNTEDQLVAAIKDYIEHPDAYNDPAPREKKLYEISADYFGKQVVDYYSSAISTHTDLELDEDSE
>NC_008525.1|WP_002833900.1|667036_667810_+|alpha/beta-hydrolase
MKLKLKSGAQIFFEDEGQGTPILFLTGFGGNTEIWSGQVNFFLQRGYRVIRLDYLNHGQSDRVDGELQIGDLADEVLQLVDYLQLKEPIGIGNSMGAAVLWNIINLRGWDFLSKAIFVDQSPKMLNDQQWHLGFKNLAEDNFDEVMNEPIVRPAYKHIDDFVFKNSKAIDSAYPFSQPRNRALVKGHAKKDWRFVLEQATKPVLFIMGEKSPFFDSTKTAELSALNANITVNVMKNVGHIPMAEDPTEFNRLVLQFV
>NC_008525.1|WP_011673182.1|665239_666964_+|phosphoenolpyruvate--protein-phosphotransferase
MAGTLKGIAASDGIAIAKAYLMVDPDLSFEKKNITDVDAEIKRLHDALEKSKEELSLIKAKAAENLGAEEAEVFEAHLTILSDPELIGNIEDKIKNDTINAEEATKEVTDNFISMFEAMTDNAYMQERAADIRDVTKRLMSHLLGVELPNPALIDSEVVIVAHDLTPSDTAQLDRRYVKGFITDIGGRTSHSAIMSRTLEIPAVVGSEKATTSIKQGEMMIVDGLTGDAIIAPTDDEIKAYQQKGEEFKAQKAEWEKLKNEKTVSKDGVHFDLAANIGTPDDLQGVLDNGGEAVGLFRSEFLYMNASELPSEDEQFEAYKKVVEGMNGKQVVVRTMDIGGDKELPYLPLPEEMNPFLGYRAIRISLDRTDLFRTQLRALLRASAFGKLAIMFPMIATVAEFKKARAIYDDERQKMVDAGQEVGEIQVGMMMEIPAAAMIADKLARYVDFFSIGTNDLIQYSFAADRGNEKVSYLYQPYNPSLLRLIKQTIDASHAEGKWTGMCGEMAGDQIAVPILMGLGLDEFSMSATSILKTRSLMKKLTTDDMKKLAEKAVTEAETNEDVIKLVQETVDNI
>NC_008525.1|WP_002833902.1|664973_665240_+|phosphocarrier-protein-HPr
MEKRDFHVIAETGIHARPATLLVQSASKFNSDIQLTYKDKSVNLKSIMGVMSLGVGQGADVTISADGDDEADAIAALEDTMKKEGLSD
>NC_008525.1|WP_002833903.1|664639_664828_+|hypothetical-protein
MRDYLQLLNDLKDGSIKELKITAEEFQDFQPRFMEFPERKQVIGKADRGGIVVYHFERIKDK
>NC_008525.1|WP_041526957.1|662215_664435_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MLCQNCQKNEASIHLYTNVNGQRTEVNLCQNCYQLLKNQRNNNINRNGGARMAQDPFGFGNLDDIFRAMQGGNMGQPENLYGQQVPPTQPGGGNGSGGNPNNRGNGGSLLSQYGLNLTDLAKQGKIDPVIGRDSEIERVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQRIVEGSVPQKLVNKQIVRLDVVSLVQGTGIRGQFEQRMQQLMKEVQANKDMVVFIDEIHEIVGAGNAEGGMDAGNVLKPALARGDFQLVGATTLKEFRDIEKDAALARRLQPVQVDEPSEEEAIKILKGIQKKYEDYHHVHYTDDAIEAAVKLSKRYIQDRFLPDKAIDLLDEAGSKKNLTINIADPETIQKKIDEAEAQKKAALQSEDYEKAAYYRDQVSKLEKNKDGATSSEEQPTVTEEDMEKIIETKTDIPVGDLQKQEQEQLQNLSENLKDHVIGQNEAVDKISRAIRRNRIGLNGTGRPIGSFLFVGPTGVGKTELAKQLAQQLFGSKDSMIRFDMSEYMEPHSISKLIGSPPGYVGYEEAGQLTEQVRRHPYSLVLLDEVEKAHPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTGDVQADVGFGAAAQGKTHSVLDKLGNYFKPEFLNRFDDIVEFQALTKENLMQIVDLMIADVNSMLATQGLHVDVTKPVEERLVDLGYNPKMGARPLRRVIQEQIEDRIADFYLDHPAEKQLNAKIKDDQIEITGAPKKD
>NC_008525.1|WP_002833905.1|661798_662161_+|DUF1634-domain-containing-protein
MNAKKQEMQHVELVIGRVLQVGVYISALVILLGIGLWLFKNGSGYSGALPTRITPIFHGVLAFKPYAVLMFGIFLLILTPVLRVIVSIYAFAKEGDRLYVVITTIVLVILIIGMAIGYRG
>NC_008525.1|WP_002833906.1|660953_661799_+|sulfite-exporter-TauE/SafE-family-protein
MASHLIILLLVGLMAGIFGAILGIGGGMIITPVLTVAMGLDIKYAIGASIIAVIATSSGATIAYLKDEMLNLRVAMFLEIATTVGAIVGAIMTGIFNSTVLFVLFGSFLVFSSWNMYRKLRRGGGEEGSTKNDRLANQLNLNGSYYDKALKKNVDYQVENVPGGSAVMFGAGLASGLLGIGSGAFKVMAMDNIMKMPLKPSSATSNLMMGVTAAASAMVYFFNGSIHADIAGPLAIGILFGAQLGSRIMQHLQPRWIRMIFIPVLLYMGLQMILKGFGVNI
>NC_008525.1|WP_011673183.1|678837_680571_+|pyruvate-oxidase
MTEKINASDAMIKVLESWGVHNVYGLPGGSFDSTMNALYNRKSTINYVQVRHEEVGALAAVGEAKVTGKLGVTFGSAGPGAVHLLNGLYDAKHDHMPVLALVGQVPTTLMNTDYFQELNENPIFTDVAVYNRTVMTAEQMPHVVDEAIRQAYKYSGVAVVTIPKDLGWQPIEDNYVSSANLYQAPILPEPDVKQVDEALEILSNAKHPVMYIGQGTRGAGSDIIALSEKLHIPIVTSALAKGIVPDSYKANMGSAGRVATKPGVEVLQAADAVMFVGSDFPFQPYFVAPDAKYIQVDIDASKFGRRHVVDLAILADSHKFLKVMLEKAETTAESKWYKAALENKKNWEEWKNSFVGQQDTPLNVENVFAKINALATDDAIFQVDVGNVTIDGMRFLKADQAQRFTTSGWYATMGYALPAAIGAQAEYPDRQVWSISGDGGYAMVMQDVLTQVKYHMPIINVILTNESLGFIEAEQDDSKQPHSGVDLIDADYGTSAQALGAEGFEVRTYDELEQAFEKAKDRKGPVVIDIKITNLRPLPVEQLLLDKETQDPEAVEQFVKKYHAESLIPFRKLLEEA
>NC_008525.1|WP_011673184.1|680640_681372_-|hypothetical-protein
MNKINLPKFNYPIEKKSYLPAINALLLSVVPWYLSSHFSSEIFSKHLSIQILFFLATFMVNFLTIDRLTNKTNLRLMAPLAIIPILTFIILLFSENTYVALLGLLSFVPFLTTFLPFEQKNGVGLLTFSLSVGTLAPLAFFYIRNGFVTSILLKMGLLLSLMIIVILFAIFIKTSFKFAIFALALTLIITIFAFILLKSWTALIYPILAVFSWFVPKLHLPRNFTLLVLIALIGLASFFITIN
>NC_008525.1|WP_002833742.1|681544_682735_+|methionine-adenosyltransferase
MSERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETREGHEDRLNQIGAGDQGLMFGYATNETEELMPLPIMLSHHLMQRIAKLRKEQVISYLRPDAKAEVTVEYDDNDHPVRVDTVVLSTQHDPDVTLEQIRQDVIEQVIKAVIPATLLDENTNFYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGAARHGGGAFSGKDATKVDRSASYAARYIAKNIVAAKLAERVEVQIAYAIGVAEPVSVMVDTFGTGTVSEEKLTQAVRKIFDLRPAGIIEMLDLKRPIYKQTAAYGHFGRTDVELPWEKTDKVEALNDFFKN
>NC_008525.1|WP_011673185.1|682809_684276_+|MFS-transporter
MEKKQTNVVVVTVAIFVATFMSAIEGTIVSTAMPTIVGDLHGVSLMNWVISIFLLTNAIFTPIYGKLSDIFGRKRVFIFGIIIFLIGSMLSGMAHSMGFLILWRALQGIGAGSIMPVSNTIIADIYPIEKRAKVMGLNGSAWGIASIIAPLLGGFIVDNLSWHWIFFINLPIGIITIFLIQFFLKEEVSVHSKKIDYLGSFWLMVALLGLMYGFQLMGESSFSWITLVISFVIFIVGAGLFIRQEKRAEDPIIFLDLFNNRTFVIQNVATMLVSGLLIGFEVYLPSWTQGILGVPASLAGFAVTPSSILWIFGSFLAGRMIVKLKANQILTISLSILAVGSLLLALVPASTPFLAFFFIAAILGVGFGITITSTLVISQQLVTKDRIGVATSFNTLAKTLGQTIMMSVFGIIMNGTMNAGVKANPKINMDMMNKVINPQTAKTLPETLLPTLRNVLYQALHNIYIGCFILIVVALIINAFDRRSKDNI
>NC_008525.1|WP_002833744.1|684322_684886_-|class-I-SAM-dependent-methyltransferase
MLDNAMQYSHQLLTEIVQPGDVVIDATMGNGHDTLFLSELVQSTGRVFSFDVQKAALEQTRALFEHQHQTLINVELIHASHDQIDHYVTEPITGAIFNLGYLPGGDKSIITHPTSTISAVQQSLNQLKIGGRIILVCYYGHPGGQEELQQLLSFVAELDQHHYSCLRYEFINQINNPPILLCIERKK
>NC_008525.1|WP_011673186.1|684878_685511_-|phosphatase-PAP2-family-protein
MHSRKYTHLLINILPTLLFILIVSLVIFKPSWVHAYDNSISSLVQSVRTPGFNQVVSIYTQLGNSIPYIIISLIVCLILILKHLKKAALFLACNIVLGNGLNHLIKQIIQRQRPEFRLISIGGYSFPSGHSVAAMVLFGSLIFITFQVVHHQLKRNLLALIYLILMLGIGLSRIYLNVHFPTDVTAGFLLGLIVLQFTTYLFYGRKIKNA
>NC_008525.1|WP_002833746.1|685857_688275_+|leucine--tRNA-ligase
MAYNHKDIEQKWQQFWSDNETFKTVEDADKPKYYALDMFPYPSGQGLHVGHPEGYTATDIMSRMKRMQGYKVLHPMGWDAFGLPAEQYAMKTGNNPRDFTAKNIQNFKRQIQSLGFSYDWSREVNTTDPAYYKWTQWIFEQLYKKGLAYEKETLVNWAPDLMGGTVVANEEVVDGKTERGGFPVYRKPMKQWILKITAYADRLIDDLDLVDWPDSIKEMQKNWIGRSVGASVFFNVEDSEKQIEVFTTRPDTLFGATYLVISPEHDLVDQITTPESKAAVEEYKKAVATKSDLERTDLNKDKTGVFTGAYAVNPVNGKKIPVWISDYVLASYGTGAVMAVPAHDGRDYEFAKKFKIDMVPVYEGGNLEDGVLDSEGGLINSGFLDGMDKQTAIDTMISWLEEHGVGHKKVNYRLRDWVFSRQRYWGEPIPVIHWEDGETTLIPEDELPLRLPAATDIRPSGTGESPLANLDDWVNVVDENGRKGRRETNTMPQWAGSSWYFLRYVDPKNDQKIADEDLLKEWLPVDLYVGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLVNQGMILGSNHEKMSKSKGNVVNPDDIVERFGADTLRLYEMFMGPLTESVAWSEDGLNGSRKWIDRVWRLMIDDENQLRDHIVTENDGSLDMIYNQTVKKVTDDYENMRFNTAISQMMVFVNEAYKADKLPAVYMEGLVKMLAPIIPHVAEELWSLLGHEGGISYAEWPTYDESKLVEATVQVILQVNGKVRSKITVDKDIAKEELEKLALADAKIQQWTADKTVRKVIVIPNKIVNIVVG
>NC_008525.1|WP_011673187.1|688478_690164_+|polysaccharide-biosynthesis-protein
MDKQSEMDNSESLYMGSQPLRDNSGKSSSKAKMLEGSAWMTAGSIFSRILGAIYIIPWVIWFGVYSDQANALFTKGYNIYSFFLIAAIAGIPSAISKQVSHYNAINEFALGQRLYKRGLLLSVGTGIICAAILYFGAPFLKDGDPNVITVLHALAWAVLVIPTMSLTRGFFQGYQEMGPSAVSQFIEQLARVIYMLTTAYFIMGKSGQGDWVYGVSQSTFAAFIGALGGLLVLGIYFIKYRKRLSYLSQHSANELVVSTSTLYKEIIAQAVPFIIIGSAITIFQLIDQYTFFRIMNAVSDYSTAVLNNMYAIFAFNANKLVMIVISLASAMAVTSVPILSEAKTRGDRAEISRQVTDSILLFAFLMIPAALGMAAVAQPAYTLFYHLSDVGTAILQFNSYVAIVLGLFTVISAIMQGIGENVLAVKYFCVGMIVKFIFQFPMVALFSAVGSLISTAIGFMVVNWMILRHINLEYGLDYRRINTFIGKIITYAFGTFLIAMVVTNGLYIVMDPASKVQSLLVIAAAVVLGGAFYLYFVLKSRLADEIVGARAAGLRRMLKIS
>NC_008525.1|WP_002833748.1|690172_690892_+|16S-rRNA-pseudouridine(516)-synthase
MRVDKFLHDMNMGTRTQIRKMIKDKLIFVNDTVVKTGRVKVDPVVDEVRLKDQVIEYQQYFYFMMNKPLGVLTATEDRKQKTVMDLFNKVDLRNDLFPVGRLDKDTQGLLLITNNGQLAHDLLAPERHVDKTYEAVVTGKITDQAVEEFQKGITLRDGTTLKPAQLIIEHYSELDDQTVVKVVLKEGKYHQVRRMFGSLGEKVVTLRRTSFGPLELDVGLLPGTYRELTDDEINRLVEG
>NC_008525.1|WP_002833749.1|690914_691754_-|NAD(P)H-hydrate-dehydratase
MLKINQDGLNNLWPVRSNDSHKGSYGRILIVAGNDQYGGAGILSSSAAVYAGGGLVTLATDKTNFTAVRSTLAEVMLLDFLDFDALKAALKKSTGVVIGPGLGTNATSLKILKFVLDHVQPQTPLVIDGSAIDLIATHQIQVDHPQTIFTPHQMEWQRLSGIKIVDQNPSLNQRAVDRLKAMVVLKHYETEIYAPHTDFRQIMAGNPGMATGGSGDALTGVIIALVNQVDSLALGVTLGTFLHSYTADQIYQKEAVVLPHRLIRRLPFTLKQLQKNKLL

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Crispr_ID: NC_008525_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_008525_2

1756205-1756319

Orphan

Consensus_repeat	Method
TGACTTCCTGAATCTAACTGTTGAACGCCAC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NC_008525_2

>merge|NC_008525|2|1756205-1756319|CRISPRCasFinder
TGACTTCCTGAATCTAACTGTTGAACGCCACTAATCAAGGTTCCTGTGCTTCCGTTTAGAGTTTGAAGTCCGCTATTCAATGTGTGACTTCCTGAATCTAATTGTTGAACGCCAC

>NC_008525|2|2|1756205-1756319|CRISPRCasFinder
TGACTTCCTGAATCTAACTGTTGAACGCCAC	TAATCAAGGTTCCTGTGCTTCCGTTTAGAGTTTGAAGTCCGCTATTCAATGTG
TGACTTCCTGAATCTAATTGTTGAACGCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_008525.1\|WP_011673874.1\|1753622_1754276_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380313
NC_008525.1\|WP_049752783.1\|1759183_1759687_-\|DUF1836-domain-containing-protein	unknown	unknown	gnl\|CDD\|378076
NC_008525.1\|WP_011673869.1\|1747587_1748706_-\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|213783
NC_008525.1\|WP_011673870.1\|1748717_1749704_-\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NC_008525.1\|WP_011673886.1\|1766853_1768056_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NC_008525.1\|WP_011673888.1\|1770230_1771481_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NC_008525.1\|WP_011673873.1\|1752872_1753586_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NC_008525.1\|WP_011673867.1\|1743913_1745320_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798
NC_008525.1\|WP_011673868.1\|1745322_1746612_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NC_008525.1\|WP_011673879.1\|1759706_1760570_-\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257
NC_008525.1\|WP_011673885.1\|1766131_1766857_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|376350
NC_008525.1\|WP_011673875.1\|1754533_1755169_-\|DUF4767-domain-containing-protein	unknown	unknown	gnl\|CDD\|374270
NC_008525.1\|WP_011673880.1\|1760772_1761612_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|236841
NC_008525.1\|WP_011673872.1\|1751330_1752713_-\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NC_008525.1\|WP_011673871.1\|1749972_1751316_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NC_008525.1\|WP_002834184.1\|1746604_1747585_-\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NC_008525.1\|WP_011673887.1\|1768735_1770178_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NC_008525.1\|WP_011673884.1\|1765243_1766080_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|252986
NC_008525.1\|WP_011673881.1\|1762029_1763835_-\|DUF2207-domain-containing-protein	unknown	unknown	gnl\|CDD\|378333
NC_008525.1\|WP_011673877.1\|1758771_1759092_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042

Protein	Function_ID	Function_description	E-value
NC_008525.1\|WP_011673874.1\|1753622_1754276_-\|nitroreductase	gnl\|CDD\|380313	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB. Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.	1.22912e-40
NC_008525.1\|WP_049752783.1\|1759183_1759687_-\|DUF1836-domain-containing-protein	gnl\|CDD\|378076	pfam08876, DUF1836, Domain of unknown function (DUF1836). This family of proteins are functionally uncharacterized.	9.77839e-38
NC_008525.1\|WP_011673869.1\|1747587_1748706_-\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl\|CDD\|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	2.73298e-159
NC_008525.1\|WP_011673870.1\|1748717_1749704_-\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	1.05582e-87
NC_008525.1\|WP_011673886.1\|1766853_1768056_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.37902e-49
NC_008525.1\|WP_011673888.1\|1770230_1771481_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	3.64249e-82
NC_008525.1\|WP_011673873.1\|1752872_1753586_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.10343e-54
NC_008525.1\|WP_011673867.1\|1743913_1745320_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NC_008525.1\|WP_011673868.1\|1745322_1746612_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	3.65771e-161
NC_008525.1\|WP_011673879.1\|1759706_1760570_-\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	1.57368e-94
NC_008525.1\|WP_011673885.1\|1766131_1766857_-\|EAL-domain-containing-protein	gnl\|CDD\|376350	pfam00563, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site.	3.26463e-22
NC_008525.1\|WP_011673875.1\|1754533_1755169_-\|DUF4767-domain-containing-protein	gnl\|CDD\|374270	pfam15983, DUF4767, Domain of unknown function (DUF4767). This domain family is found in bacteria, and is approximately 140 amino acids in length. There is a single completely conserved residue Q that may be functionally important.	4.49139e-48
NC_008525.1\|WP_011673880.1\|1760772_1761612_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|236841	PRK11088, rrmA, 23S rRNA methyltransferase A; Provisional.	2.35429e-39
NC_008525.1\|WP_011673872.1\|1751330_1752713_-\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	3.1049e-172
NC_008525.1\|WP_011673871.1\|1749972_1751316_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	2.22632e-117
NC_008525.1\|WP_002834184.1\|1746604_1747585_-\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	2.88289e-177
NC_008525.1\|WP_011673887.1\|1768735_1770178_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.25243e-61
NC_008525.1\|WP_011673884.1\|1765243_1766080_+\|manganese-catalase-family-protein	gnl\|CDD\|252986	pfam05067, Mn_catalase, Manganese containing catalase. Catalases are important antioxidant metalloenzymes that catalyze disproportionation of hydrogen peroxide, forming dioxygen and water. Two families of catalases are known, one having a heme cofactor, and this family that is a structurally distinct family containing non-heme manganese.	2.02993e-119
NC_008525.1\|WP_011673881.1\|1762029_1763835_-\|DUF2207-domain-containing-protein	gnl\|CDD\|378333	pfam09972, DUF2207, Predicted membrane protein (DUF2207). This domain, found in various hypothetical bacterial proteins, has no known function.	9.19183e-116
NC_008525.1\|WP_011673877.1\|1758771_1759092_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	8.63436e-15

>NC_008525.1|WP_011673875.1|1754533_1755169_-|DUF4767-domain-containing-protein
MRHMKKPEKRSFGSINSVVWVILALIVVIAGYKFFYPNHVTNTTSSSDRSSSTKVIKVEEGKSSSSKAQSSSKKTKKTEKKIWTDKQDSELAAFISSWQQTMGQTYTGTNANASVSFGGVSFPDYLSKGQIYVNQQEVSMQWTRSEKADSEYKVVAVYTGDQYMYLFTFHNGQPEVLVTSQSASNGMNFKVTENADLVAEFQKVAAENTDK
>NC_008525.1|WP_011673874.1|1753622_1754276_-|nitroreductase
MEVKQAIQKRHSVRHFTDQKIDSKQLKEMIGIAQKAPSWVNSQPQKVYVAQGETLEAIRKQQQELAITGAKTNSDIPPMSRKRWSEQAQKNMAEWSHGIPAVLGDNWQETLGKEASQLYNAQAVVYLTLPKGYTPWSLFDLGAFSQNILLATTEQGIDSIVAYNFVKYPQILREELNIPSDEEIIVGIGLGFEDEQAQVNRITSKRMDTESILKIKK
>NC_008525.1|WP_011673873.1|1752872_1753586_+|GntR-family-transcriptional-regulator
MYKYEKISQAIRKQIIEQKIKPGALLPDQNQLAKEFNTTRITIGKALQSLIIEGLIYSKRGAGTFVRKDAHLNDEFTNDVDKPLGTTSTHPHSKVTSKYIHLTARIANEVEKKNLLLEDGETVYVIKRTRFIEGKAYSYEQTIMPTKIATITEEVLKKSIYQYLEHEYHLELAGSHRQITARKVSEEDAKFLGEKLGDPILVISQTSYLVDGTPFEFSESRFPYRSSAVSADVNLLE
>NC_008525.1|WP_011673872.1|1751330_1752713_-|glycoside-hydrolase-family-1-protein
MKGKLPDNFLWGNSTSSMQTEGGVHEGGKGPSVYDTYEATETTSNWDVAIDNYHHYEEDLDLMANQGMNCYRFQISWSRVNPTGDGDFNEEGIQYYDRLINDLLKRGIKPMICLYHFDMPLHLAEKYNGFMSRHVVDAFVRFGKKMVDCFSDRVKLWVTFNEQNLYSQTEAFHIAGYLKGDQTDEELQLIAHHVMTAHAQVANYVHETSDAQIGGMLAYVESYPKNCRPRDVYVARQIDEFLNRNLLEAWVHGHYSTEVTQYIKNHHFDIDFTEQDQIAFEKLKSDFISFSYYASNVVDSTKIPQGTMPNRYLDYGGVENPYLKATDWGWNIDPLGFRDVITKTYNEYGIPMFPIENGIGYREKFDGTEIQDDYRIEYHRDHIQAMIDAVVEDGVPVLGYLGWGLIDIPSSSGNMEKRYGMVYVNRGNHELRDMKRVPKKSYKWFKKVIETNGNDLENDL
>NC_008525.1|WP_011673871.1|1749972_1751316_-|PTS-sugar-transporter-subunit-IIC
MGSSNKESVNDKMQNSKFIAKFTEISVKVGNWVYLRSLRDAFAVILPMFIVAGIGVLLNNVVFTWFLSGDMLTKFQVIGNAIVNGTLNVAGILVAPMIGYSLARNKGFNNPIAAAAMSLASIFILMPGSIQLGTVASAGAKMATVTGGLSYLNTGTQGMFGGIFVGLIATGLFIKLASIKKLQIHLGENVPPAVSASFSVLIPAILLMSFFAIIAALLAGFFNTDLINLIKTWIQEPLRGFNTSIVGYCVIYTLANFLFGLGIHQTVLSGALLDPLVLVNMNENMTAYAHHQAIPNIITTSFVSNYTLIGGSGSTIALIIAILIFSKAKSSRQIAGLSLAPGIFNINEPMIFGFPIVFNLPLIIPFVLFPVVGSLMGYFATLWGWVSRTVVLVPWTTPPLIGPYLSTAGDWRAVILQILIIVVGVFLYLPFLKISERVSEIQAEENL
>NC_008525.1|WP_011673870.1|1748717_1749704_-|lipoate--protein-ligase
MRYVTYMGTDAYTNIATDTWLLNNLNAKEPVFALWQNNNAIIVGQNQNTFGEVNQDFVDEHQIEVVRRVTGGGAVYHDLGNLNFTLFVPIESAANVDFKKFSEPVLRALHTLGIDAEASGRNDLLVNGKKISGVAQRYAKGYLMHHGTLLFDSNVDTMVRSLNVADEKFISKAAKSVRSRVGMIKDAAPKGLTLQDFWDAVQYELTDHGKDQEIVLTPQQKQEIIQLTADKFSTWDWNYGRSPEFNFKNHAKYDGGIIDVQVQAEGGTIRDINFTGDFLGLRDWREIKDQFIGLPFETVEIKPVFERNHEGRYFGNITDDELIKLFEA
>NC_008525.1|WP_011673869.1|1747587_1748706_-|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MAVKDDNKQVLDFNLQMEKQTDSFPMLQVLNNDGEIVDEDALKEAGLSDDQLVELMKQMVFSRVLHERSTKLAKQGRLGFYAPTIGEEASQIASNYAFEKGDWLFPGYRDIPQLVMKGWPIYKAFLWSRGHYEGNEFDDVNGWMPQIIIGAQYVEAAGAALGLKMRKQPNVAYAYTGDGGTSQGDFYEGMNFAGAYNAPAVFFSQNNEYAISTPRKLQTKAPHLAAKGWAAGLPSLVVDGMDPIAMYLASKKARQWAVDGNGPVFIETITNRLGAHSMSGDDPLRYRTQEEIDEWTKKEPLIRFRKYLEGLGFWSEEIENDWTEVVNEQIDDGVKQADGIDKQKISDFIEQTLEVPGQAAQEQINKFRGEGK
>NC_008525.1|WP_002834184.1|1746604_1747585_-|alpha-ketoacid-dehydrogenase-subunit-beta
MAQKTYIQAITEAQDLALANDENVVIFGEDVGKNGGVFRATDGLQAKYGEDRVFNTPLAESGIGGMAIGMTTQNYRPIMEIQFFGFVYEVMDSLAGQMARGRFRFHGTRTFPIVVRSPYGGGTKTPEMHADSLEGLVAQTPGLRVVMPATPADAKGLLLSAVESNDPVIFLENLRLYRSIRGDVPEGYYTTPLDKANVIREGKDVSIITYGGMVHTSLAAAEELAKDGIDAEVVDLRTVSPLDLDTIGESVEKTGRVVVAQEAQRQAGIGAMVMSEISERFIMSLKAPIGRVAAPDSVYPFALAENEWLPKADDIIEKVKEVVNFD
>NC_008525.1|WP_011673868.1|1745322_1746612_-|2-oxo-acid-dehydrogenase-subunit-E2
MTEIFKMPDIGEGMAEGEIANWLVKVGDTIKEEDAVAEVQNDKLLQEILSPYGGKITKLFVEAGTVVKVGEPLIEFDGDGSGAGAESEVPKETPASTEPEPESSAPVDQTAPEVTKVGAEYTSNGQLLAMPSVREYARKNDIDLTQVPATGRHGHITMADVENFKASPAPAASVPETESEKAPSAPVTPAAPAEVKAGRVPLSPVRKVIAKTLTNQVQTIPHVTIMDEVEVSKLMDLRNQFKEQAKQKGYKLTYMPFIAKALAGAAHKYPELSAMVDIEKQEIVYYEDTNVSFAVDTDNGLFVPNVKNVKSKSIMEVAQEIDDMAIRGRAGDLKPNELKGGTVTITNIGSESGSGFFTPIINPGESAILGIGRIRKTPVVNEDGELAVGNTLKLSLSFDHRLIDGALAQKIMNELKALLSNPAYMLMEV
>NC_008525.1|WP_011673867.1|1743913_1745320_-|dihydrolipoyl-dehydrogenase
MVVGTQAINVDTLIIGSGPGGYVAAIRAAELGQKVVIVERDYIGGVCLNVGCIPSKALIQAGHLYSTLQHGNPFGVSVSESKIDFTKTQEWKQNQVVNKLTGGVELLLKKHKVAIVRGEAYFNDNETVNVINGDDSHVYRFKRALIATGSRPVEIPHFKFSGRVIDSTGALNLKDVPEHLIIIGGGVIGAELAGAYMNLGSKITIIEGLDHILNGFDGELIQPVLNNFKKNGVEIVTEATAVEANQTDKDVTVTYEADGTTKTVNGDYCLVSVGRRPNTDQLGLNNTNIKLSKRGLIEVNDSMQTSVKHIYAIGDVVAGPALAHKASFEAKVAAAAMGGEDAHDTHYVLPAVAYTNIELATVGETPQSIAEKKLDAKSSKFPFAASGRAMTMDQTEGFIRLITDNPTGGIIGAQIVGPEASNLISELTLAIENGLTIKDIELTIHPHPTLGEEIMDAAELAAGLPIHV
>NC_008525.1|WP_011673877.1|1758771_1759092_-|winged-helix-turn-helix-transcriptional-regulator
MVKNNAALAAFKKNIPLLDALSDERRQQIMITLGESDAGLTVSELTKLIGLSQPAVSHHIKQLKDLNLVSVRKVGTSNIYQLTIKDALAQVQELIDILRKDKKLLR
>NC_008525.1|WP_049752783.1|1759183_1759687_-|DUF1836-domain-containing-protein
MDSKQLENFAKMSLPKWDELPNIELHLDQVIDLANNYLRPLEVDLLTPTMMHNYLKQAVIIRPQGKLYGRMQLAAVIIIGCLKSILSLDEIKRGFEAELKLTSSRRAYNNFVNAFNEEVQRISQHGPRNLWNELLAETAVVSLQHSAIISMLTKKMAKDLLSDLEEK
>NC_008525.1|WP_011673879.1|1759706_1760570_-|DegV-family-protein
MLKQKIAVLVDSCSDVPAEIANREYFEMIPMGVFFGEEEYQDRVNIEPDEFYQKLAKANPLPTTASPKGELITKALDNLSKRGFTQIIAVCISSGLSGTAQQVKIYAKNYPQLQIEVIDTKNIGIASGFAAVRASEVIEEGWEFDQIVEEVQRVANQTKVFFYVPTLKYLIAGGRIGRVAGLVGSIINLKPIISCDDEGIYYPVAKAHGEKKALKKMLQLVDDTLENAQKFNLAVVHGLNEGLMNQISTEFKNKYPNMGKFYNGDISPALGVHTGPGLIGIGVQIIK
>NC_008525.1|WP_011673880.1|1760772_1761612_+|methyltransferase-domain-containing-protein
MNKIELATQFIQRHLHQFQCPICKSNFNEVQSGTLICNNQHSFNIAKKGSLFFLNNPVNTEYTNEMLTYRNQFLTAGFFNPMLEEVINNISGDLILDAGCGEGTTTKWMASHFDGDFVGLDISKPAINIAGSGIAPQPYPLFMVGDLAQLPFADQGLTSIVNILSPANYQEFDRTLATHGELIKVIPGNHYLSELRQLVYPDGEHATYDNAPVKNHFIEHYEHVEFSKISYKFPLNDKLFTALFNMTPLTWQAQDRKEAILQDGLKEITAEFEIGVVHK
>NC_008525.1|WP_011673881.1|1762029_1763835_-|DUF2207-domain-containing-protein
MKFFTKRTFLLLVTMLTFGIFWNVKTVKADYEISQFRMQINVNKDGSANINQSVLYDFDDDYHGVYLTQDLRGTAGAELEGITVSNNKGTQNQVPINNSGENLTAKVESSKKQMKIRVYNAVSSDDQTKITYHYRINGVVTNYKDTAEINWKVIGSGWDVPLEDAQVTIKLPGKNVKGLHAWSHGEAAGYTTVDKAKGKVTLDIGDNPENTFVEAHMVFPTALTPDNKKIVNQNHLAAVKKQEYQLVKRENEAQARAQRIAAYAKITSAIISVLILIGMMGWLKKHGYHQYDIPTPMEHSFDVPSISPAEAEALFNKSKADTKGVSAEMLVLAAEGKLKFKQIPYGKRGKETTEIERQGKFNMSFVDRCLDRIGDGQQVTIKQINDYAKKDKKNNVATWYKEWQSEVDTNLARFKDTYNISYRHGLLGLAIATPILAFIVGIIGRFGEATNLYWIGGIVLTLIIEAWVLATWDKVSMYNEAGLQQYNQIRGFKQMMKDIAHFNTAEIGDLILWEQILPYATAFGLAEKVAKKLKTDFGTQLNENVPFYAYYYGINGMHVGIANSISTSISHSVSASSSGSSGGFSGGSSGGFGGGSGGGAF
>NC_008525.1|WP_011673884.1|1765243_1766080_+|manganese-catalase-family-protein
MFKHQKELQFEAKPDRPDPIVAKYLQELIGGQYGEMSVAMQYLFQGWSCRGEEKYKDMIMDIATEEIGHVEMLATMVARLLEDAPIADQQAAMQANPTVGAIISGMNPQHAIVAGLGPRPADSVGNPWSGAYIIASGNLLADFRANLNAESQGRLQVARIYEMIDDQGVKDLLSVLLARDSYHQNLWASAVKELEEKEGSMLVPTTFPRDKERKDIAYDFYNFSQGDESSTGPWASGEALDGEGEYHWYDEPKVEGSAPNLKPVSPKMYGTSENKSEI
>NC_008525.1|WP_011673885.1|1766131_1766857_-|EAL-domain-containing-protein
MSELEQKLEGICFYEQPIFLIDAAEKEEKKVIGSELLLRKTGGENRFPAMLYKEYMRDDASNLVFCTWLVKNIIEIINDNPGIQYSFNLDPQQLLYDSTFEAMKGLIPYCDRVMIEVTESIPSNRDIDQYFNYSVRDQIKRIHEMGFSVAVDDVSSGMNSFNAVREYTQDIDRLKLSLIQLRNVEEGMITVTISLWKALAASTGIDLVIEGIDSLEVSKWLLENGLEKQQGYYFATPRKLK
>NC_008525.1|WP_011673886.1|1766853_1768056_-|GGDEF-domain-containing-protein
MENTVMNTIIYWAKGFFSFNTVVIAAITVGVLFMLAAGTYVVEMNMDKTKTSSTLIEELLWGVGLTIAMVFLQNVFTHLYSTIASSELGWEYSTAQFVVLFYCLYIVHRKVVLWFNIILPMYVYGLGIVRGQIGFDIAPILAILVIILISYTIYQQNDTLIDENVKYYSTLIMFGLAWWFVLKDIHHLTIVDIICLTLEFLIAMSIVHFGNKKVRMIMKQYLNLMQEVDTDALTGVYNRNSFNKVVKGVFEFYSNNDAPLTMVMFDIDHFKQFNDQYGHQVGDKVLRLVADRFSYELVDRKAHGQLFRVGGEEFAIIFRGRTADDCEKIVRAIRDDLVKETIRVNNHDRIGIKVSIGISQLRDDDFDFQTFYKRVDDYLYQSKRNKRNSITVEGKVASLN
>NC_008525.1|WP_011673887.1|1768735_1770178_+|MFS-transporter
MESTSFVNNPEIQKHRWWILIAVCSFTFMSTLDGSIVNIALPVMSSTMHVPMNVPMNKAEWVVSIYLIVICTLLLLFGKLGDAHGKIRVFKIGTMLFTIGSLLCGFNTGLTFLLIARIIQAVGAAMTMSTNNGIITEVFPAQERGRALGMIGSFVALGSIAGPGIGGLILAHFNWGYIFWINVPIGLLAILVGHKILPKDVIMTHQKIDKPGTILFAITMITLFVGISMGQEVGFTQPLILTMLFVALIALGTFLYVELHVETPILALYIFKNMRFTLSIICAFLIFITGFFFNVISPFYLENTLGLPANYAGYTLMIYPLINVVTAPVAGAISDKIGSEKLTFVGLLIILAAQLGYIVTNLATPLWLFMIFIGLNGLGNGIFQAPNNALVMGSVEPKDLGIAGGINSLARNLGMVVGISFATTVLFSAMSHIAGHSVTSVVPGHPEIFIAGMHVAFTVSFGVCLIATLITGYRLLRRQK
>NC_008525.1|WP_011673888.1|1770230_1771481_-|trypsin-like-peptidase-domain-containing-protein
MKTNKLVIVAAIAGLLGGGVAYGGASFIHNQMESSSTAVPTGSNTTGTTKTSNVKVNVSSQSSKAFSTIKDSVVSVINLQKANTNDSDSIISSIFGNESSSSSKSSSSSSELETASEGSGVIYKKSGDTAYIVTNNHVVSGSSSLEIIMSNGKKLPAKIVGTDSVTDLAVLKINSSAVTTVASFGNSDNIKVGETALAIGSPLGSEYATSLTQGIISAKKRTVETTTENGQNNGEATVIQTDAAINAGNSGGPLINLAGQVIGINSMKLSASGSDSTTVEGMGFAIPSNEVVTIIDQLVKNGKITRPALGVALVDLTQVSSTQQKSILKLPSNVTDGTVLMQVNNGPAKTAGLKKYDVITKIDDKAITDTAGLREALYKHKINDKITVGYYRDGKYKTTVVTLTKTSTTTSSTTTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

480872 : 488491

Bacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099046112.1\|480872_481988_+	peptide chain release factor 2	B5LLF2	Mycobacterium_phage	1.9e-05	47.1
WP_002834460.1\|481999_482704_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.9e-38	37.3
WP_002834459.1\|482675_484061_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	6.3e-27	33.3
WP_002834458.1\|484223_485105_+	phosphate ABC transporter substrate-binding protein PstS family protein	H6WG65	Cyanophage	9.3e-08	25.9
WP_011673073.1\|485104_486013_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_002834456.1\|486013_486901_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_171030525.1\|486921_487719_+	phosphate ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.4e-09	42.0
WP_002834094.1\|487732_488491_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-18	30.5

DBSCAN-SWA_2

522952 : 600040

Enterococcus_phage(11.11%)

integrase,tRNA,transposase

attL 584116:584144|attR 600120:600148

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002834053.1\|522952_523426_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_002834051.1\|523415_523913_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011673082.1\|523905_524442_-	exonuclease	M1PFD8	Streptococcus_phage	5.6e-24	39.1
WP_011673083.1\|524516_525434_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002834046.1\|525478_526381_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_002834044.1\|526511_527363_+	TIGR00159 family protein	NA	NA	NA	NA
WP_002834043.1\|527363_528293_+	hypothetical protein	NA	NA	NA	NA
WP_002834042.1\|528311_529670_+	phosphoglucosamine mutase	A0A127AWJ1	Bacillus_phage	1.5e-20	28.2
WP_011673084.1\|529905_531723_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	7.6e-89	35.3
WP_002834040.1\|531991_532303_+	hypothetical protein	NA	NA	NA	NA
WP_002834038.1\|534222_534759_-	hypothetical protein	NA	NA	NA	NA
WP_011673085.1\|534904_535588_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_147628904.1\|536030_537203_+	divalent metal cation transporter	NA	NA	NA	NA
WP_011673087.1\|537222_539394_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	3.4e-245	58.5
WP_002834033.1\|539386_539974_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	9.1e-52	55.5
WP_002834032.1\|539990_540752_+	Fe-S cluster assembly ATPase SufC	A0A285PWH2	Cedratvirus	2.9e-10	26.3
WP_002834031.1\|540789_541818_+	SufD family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_011673088.1\|541830_543006_+	cysteine desulfurase	Q2XUY6	environmental_halophage	6.2e-84	39.9
WP_011673089.1\|543002_543443_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_049752779.1\|543489_544842_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_002834025.1\|544997_545534_+	phenolic acid decarboxylase	NA	NA	NA	NA
WP_011673090.1\|545560_546091_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_029257762.1\|546300_546636_+	LapA family protein	NA	NA	NA	NA
WP_148194163.1\|546681_546930_+	hypothetical protein	NA	NA	NA	NA
WP_011673093.1\|549705_550824_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	1.7e-75	42.1
WP_011673094.1\|551557_552118_+	recombinase family protein	A0A1J1J8Z4	Escherichia_phage	3.4e-32	45.7
WP_011673095.1\|552309_553239_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	1.6e-26	31.4
WP_011673096.1\|553346_553748_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_167522503.1\|554324_554537_+	hypothetical protein	NA	NA	NA	NA
WP_011673098.1\|554785_554977_-	hypothetical protein	NA	NA	NA	NA
WP_011673099.1\|555104_556634_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_011673100.1\|556672_558046_+	MFS transporter	NA	NA	NA	NA
WP_003606447.1\|559536_559785_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_041526953.1\|560376_560709_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011673106.1\|561045_561876_-	AraC family ligand binding domain-containing protein	NA	NA	NA	NA
WP_011673107.1\|562110_564039_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_011673108.1\|564096_566298_+	alpha-galactosidase	NA	NA	NA	NA
WP_049752771.1\|567589_568468_-\|transposase	IS30 family transposase	H7BW47	unidentified_phage	2.9e-25	34.4
WP_011673109.1\|568565_568772_+	membrane protein	NA	NA	NA	NA
WP_011673110.1\|568849_569716_-	ROK family protein	NA	NA	NA	NA
WP_011673111.1\|569795_571955_-	alpha-galactosidase	NA	NA	NA	NA
WP_011673112.1\|571974_573930_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA
WP_011673113.1\|574185_575691_+	sucrose-6-phosphate hydrolase	NA	NA	NA	NA
WP_011673114.1\|575671_576652_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	9.3e-17	27.2
WP_011673115.1\|576672_578349_+	alpha-glucosidase	NA	NA	NA	NA
WP_002816285.1\|578914_579166_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_041526954.1\|579219_580029_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.6e-150	98.1
WP_011673118.1\|581182_581467_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011673119.1\|581987_583346_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.0e-98	41.4
584116:584144	attL	NA	NA	NA	NA
WP_167522504.1\|584238_584382_+	hypothetical protein	NA	NA	NA	NA
WP_011673121.1\|585610_587089_-	restriction endonuclease	NA	NA	NA	NA
WP_041526987.1\|587214_588489_+	DNA (cytosine-5-)-methyltransferase	Q8LTM9	Lactococcus_phage	6.0e-24	38.0
WP_011673123.1\|588653_591155_+	hypothetical protein	NA	NA	NA	NA
WP_011673124.1\|591151_592354_+	hypothetical protein	NA	NA	NA	NA
WP_011673125.1\|592346_594929_+	DEAD/DEAH box helicase family protein	I3VYY6	Thermoanaerobacterium_phage	7.4e-13	22.4
WP_011673127.1\|595590_597213_-	AAA family ATPase	NA	NA	NA	NA
WP_011673128.1\|597525_597951_-	hypothetical protein	NA	NA	NA	NA
WP_011673129.1\|598106_598337_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011673130.1\|598885_600040_+\|integrase	site-specific integrase	A0A097PAS9	Streptococcus_pyogenes_phage	3.6e-60	37.2
600120:600148	attR	NA	NA	NA	NA

DBSCAN-SWA_3

769694 : 856974

114

Lactobacillus_phage(34.78%)

tail,head,integrase,plate,portal,terminase,protease,tRNA,capsid,holin

attL 780673:780697|attR 818728:818752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002833521.1\|769694_770384_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002833522.1\|770416_770629_+	YqgQ family protein	NA	NA	NA	NA
WP_002833523.1\|770646_771609_+	ROK family glucokinase	NA	NA	NA	NA
WP_002833524.1\|771640_772060_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_002833525.1\|772113_772290_-	DUF3042 family protein	NA	NA	NA	NA
WP_002833526.1\|772372_773107_+	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	1.2e-13	35.2
WP_002833528.1\|773108_774041_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_011673217.1\|774024_775281_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_002833530.1\|775361_775727_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002833531.1\|775761_777102_+	type I glutamate--ammonia ligase	M1NM71	Moumouvirus	2.5e-12	22.8
WP_002833532.1\|777250_778126_+	hypothetical protein	NA	NA	NA	NA
WP_002833533.1\|778118_779036_+	hypothetical protein	NA	NA	NA	NA
WP_002833534.1\|779045_779585_+	dUTP diphosphatase	A0A290GJJ6	Caldibacillus_phage	9.7e-08	26.2
WP_002833535.1\|779889_780117_+	hypothetical protein	NA	NA	NA	NA
WP_002833536.1\|780256_780460_-	hypothetical protein	NA	NA	NA	NA
780673:780697	attL	NA	NA	NA	NA
WP_011673218.1\|780797_781937_-\|integrase	site-specific integrase	E9LUK6	Lactobacillus_phage	7.3e-90	49.3
WP_011673219.1\|782083_782488_-	hypothetical protein	NA	NA	NA	NA
WP_011673220.1\|782545_782983_-	ImmA/IrrE family metallo-endopeptidase	E9LUL3	Lactobacillus_phage	2.1e-16	39.2
WP_011673221.1\|782986_783337_-	helix-turn-helix transcriptional regulator	Q9T1J3	Lactobacillus_phage	8.4e-13	38.1
WP_011673222.1\|783593_783803_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_011673223.1\|783816_783996_+	hypothetical protein	NA	NA	NA	NA
WP_011673224.1\|783985_784126_-	hypothetical protein	NA	NA	NA	NA
WP_011673225.1\|784186_784912_+	phage regulatory protein	D2IYT0	Enterococcus_phage	3.5e-53	50.4
WP_011673226.1\|784914_785259_+	DUF771 domain-containing protein	NA	NA	NA	NA
WP_011673229.1\|785534_785996_+	hypothetical protein	NA	NA	NA	NA
WP_011673230.1\|785992_786649_+	ERF family protein	A0A2H4JA34	uncultured_Caudovirales_phage	6.4e-22	33.7
WP_011673231.1\|786651_787050_+	single-stranded DNA-binding protein	D6PSU2	Lactobacillus_phage	1.5e-37	58.3
WP_011673233.1\|787955_789203_+	DnaB-like helicase C-terminal domain-containing protein	A0A0P0IXJ2	Lactobacillus_phage	1.1e-62	37.4
WP_011673234.1\|789205_789622_+	hypothetical protein	NA	NA	NA	NA
WP_011673235.1\|789618_790038_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0IXM5	Lactobacillus_phage	6.3e-39	55.6
WP_011673237.1\|790246_790477_+	hypothetical protein	NA	NA	NA	NA
WP_011673238.1\|790490_790631_+	hypothetical protein	NA	NA	NA	NA
WP_011673239.1\|790645_791017_+	hypothetical protein	NA	NA	NA	NA
WP_011673240.1\|791060_791525_+	hypothetical protein	NA	NA	NA	NA
WP_011673241.1\|791536_791830_+	hypothetical protein	NA	NA	NA	NA
WP_011673243.1\|791996_792563_+	DUF1642 domain-containing protein	A0A126GGJ0	Streptococcus_phage	7.0e-09	38.7
WP_011673244.1\|792562_792751_+	hypothetical protein	NA	NA	NA	NA
WP_011673245.1\|792743_792911_+	hypothetical protein	NA	NA	NA	NA
WP_011673246.1\|793069_793366_+	hypothetical protein	A0A2K9V535	Lactobacillus_phage	2.9e-14	44.3
WP_011673247.1\|793365_793707_+	hypothetical protein	A0A1S5SCI4	Streptococcus_phage	3.5e-11	36.4
WP_011673248.1\|793709_794129_+	hypothetical protein	NA	NA	NA	NA
WP_011673249.1\|794200_794374_+	hypothetical protein	NA	NA	NA	NA
WP_011673250.1\|794440_794899_+	DNA-directed RNA polymerase sigma-70 factor	O03925	Lactobacillus_phage	2.2e-13	34.8
WP_011673251.1\|795079_795322_+	DUF2829 domain-containing protein	A0A0K2FLC4	Brevibacillus_phage	1.3e-09	44.3
WP_011673252.1\|795367_795508_+	hypothetical protein	NA	NA	NA	NA
WP_011673253.1\|795646_796228_+	YfbU family protein	NA	NA	NA	NA
WP_011673254.1\|796308_796806_+	helix-turn-helix domain-containing protein	L0P6X1	Lactobacillus_phage	2.8e-09	33.1
WP_049752772.1\|796789_798067_+\|terminase	PBSX family phage terminase large subunit	Q6SE84	Lactobacillus_prophage	5.9e-173	68.4
WP_011673256.1\|798074_799478_+\|portal	phage portal protein	A0A0P0IJV3	Lactobacillus_phage	2.8e-155	60.7
WP_148194174.1\|799584_800424_+\|capsid	minor capsid protein	A0A0P0ID43	Lactobacillus_phage	9.9e-68	48.4
WP_011673258.1\|800426_800642_+	hypothetical protein	NA	NA	NA	NA
WP_011673259.1\|800751_801363_+	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_011673260.1\|801377_802292_+	hypothetical protein	Q5YA70	Bacillus_phage	4.8e-100	62.2
WP_099046114.1\|802309_802576_+	Ig-like domain-containing protein	NA	NA	NA	NA
WP_011673262.1\|802587_802959_+\|head,tail	phage head-tail connector protein	A0A0P0IV23	Lactobacillus_phage	1.1e-26	54.4
WP_011673263.1\|802963_803272_+	hypothetical protein	A0A097BYD2	Leuconostoc_phage	1.8e-11	44.6
WP_011673264.1\|803264_803606_+	HK97 gp10 family phage protein	A0ZVS5	Lactococcus_phage	5.3e-20	48.1
WP_148194164.1\|803606_804014_+	hypothetical protein	A0A097BYB7	Leuconostoc_phage	8.6e-25	42.2
WP_011673266.1\|804025_804610_+\|tail	phage major tail protein, TP901-1 family	A0A097BY79	Leuconostoc_phage	4.2e-41	48.9
WP_011673267.1\|804686_804965_+	hypothetical protein	A0A220BYE2	Staphylococcus_phage	4.6e-06	51.9
WP_011673268.1\|805104_805446_+\|tail	tail assembly chaperone	A0A0A1ER95	Lactobacillus_phage	1.1e-30	59.3
WP_041526960.1\|805496_805871_+	hypothetical protein	A0A1B0Y2Q4	Lactobacillus_phage	9.6e-15	40.0
WP_011673270.1\|805854_808875_+\|tail	phage tail tape measure protein	A0A0A1ENQ9	Lactobacillus_phage	2.8e-03	35.4
WP_148194165.1\|808862_809639_+\|tail	phage tail protein	A0A286QN36	Streptococcus_phage	2.4e-39	38.9
WP_011673272.1\|809638_812599_+\|tail	phage tail protein	Q6SEC2	Lactobacillus_prophage	1.9e-142	36.0
WP_011673273.1\|812582_812996_+	hypothetical protein	NA	NA	NA	NA
WP_011673274.1\|812999_814829_+\|plate	phage baseplate upper protein	O03968	Lactobacillus_phage	6.0e-102	37.4
WP_011673275.1\|814840_815581_+	hypothetical protein	NA	NA	NA	NA
WP_011673276.1\|815580_815922_+	DUF2977 domain-containing protein	NA	NA	NA	NA
WP_148194175.1\|815921_816074_+	XkdX family protein	E2ELK1	Clostridium_phage	2.1e-05	51.2
WP_011673278.1\|816136_816739_+	hypothetical protein	NA	NA	NA	NA
WP_011673279.1\|816781_817183_+\|holin	phage holin family protein	A0A097BY69	Enterococcus_phage	9.6e-21	41.0
WP_148194176.1\|817208_818483_+	1,4-beta-N-acetylmuramidase	A0A1X9IGI4	Lactococcus_phage	1.4e-81	66.4
WP_002833537.1\|819016_819529_+	hypothetical protein	NA	NA	NA	NA
818728:818752	attR	NA	NA	NA	NA
WP_011673281.1\|819862_820492_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_002833539.1\|820621_820930_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_011673282.1\|820951_821278_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_002833541.1\|821301_821589_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_002833542.1\|821713_822277_+	elongation factor P	NA	NA	NA	NA
WP_002833543.1\|822294_822723_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002833544.1\|822722_823124_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_002833545.1\|823249_824101_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	4.9e-38	39.7
WP_002833546.1\|824101_825445_+	exodeoxyribonuclease VII large subunit	A0A2H4UVM9	Bodo_saltans_virus	2.1e-43	30.9
WP_002833547.1\|825444_825681_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_002833548.1\|825673_826564_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_002833549.1\|826577_827396_+	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_002833550.1\|827404_827863_+	arginine repressor, DNA-binding domain protein	NA	NA	NA	NA
WP_011673283.1\|827874_829551_+	DNA repair protein RecN	NA	NA	NA	NA
WP_011673284.1\|829622_829958_-	hypothetical protein	NA	NA	NA	NA
WP_002833553.1\|830253_830868_+	guanylate kinase	A0A223FN12	Murmansk_poxvirus	1.8e-18	32.9
WP_002833554.1\|830869_831079_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_011673285.1\|831190_832384_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	5.6e-40	30.9
WP_011673286.1\|832398_834819_+	primosomal protein N'	NA	NA	NA	NA
WP_011673287.1\|834841_835804_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	5.7e-11	39.3
WP_011673288.1\|835787_837122_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_002833560.1\|837130_837877_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	G9BWD9	Planktothrix_phage	2.8e-05	24.2
WP_002833561.1\|837873_839397_+	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A0H4Y184	Salmon_gill_poxvirus	9.1e-19	28.5
WP_011673289.1\|839407_840337_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_002833563.1\|840333_840981_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_011673290.1\|840980_841622_+	thiamine diphosphokinase	NA	NA	NA	NA
WP_011673291.1\|841665_841851_-	50S ribosomal protein L28	NA	NA	NA	NA
WP_002833566.1\|842150_842513_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_041526961.1\|842534_844229_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_011673293.1\|844279_846307_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_011673294.1\|846323_847367_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_002833570.1\|847405_847648_+	acyl carrier protein	M4QDG5	Prochlorococcus_phage	9.0e-06	49.3
WP_002833571.1\|847744_848443_+	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	2.6e-21	31.9
WP_011673295.1\|848452_851983_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_011673296.1\|852000_853221_+	signal recognition particle-docking protein FtsY	D6PHS7	uncultured_phage	2.7e-13	35.9
WP_002833574.1\|853226_853568_+	putative DNA-binding protein	NA	NA	NA	NA
WP_002833575.1\|853585_855016_+	signal recognition particle protein	NA	NA	NA	NA
WP_011673297.1\|855374_855647_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_011673298.1\|855721_856237_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_011673299.1\|856236_856974_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_4

897994 : 904350

Megavirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673326.1\|897994_899854_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	5.3e-138	47.2
WP_002833625.1\|899950_901075_+	molecular chaperone DnaJ	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	1.3e-22	33.2
WP_002833626.1\|901180_901408_-	DUF378 domain-containing protein	NA	NA	NA	NA
WP_011673327.1\|901536_902007_-	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_011673329.1\|902243_902726_+	QueT transporter family protein	E7DN70	Pneumococcus_phage	4.9e-11	35.0
WP_011673330.1\|902742_902964_+	DUF2829 domain-containing protein	G3MBC9	Bacillus_virus	2.0e-07	33.3
WP_011673331.1\|902964_903705_+	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	1.8e-17	30.5
WP_002833631.1\|903828_904350_+	DUF4373 domain-containing protein	A0A0P0HRQ2	Lactobacillus_phage	4.0e-43	57.1

DBSCAN-SWA_5

964897 : 1031048

Lactobacillus_phage(71.79%)

tail,head,integrase,portal,terminase,protease,holin,capsid

attL 965450:965467|attR 1032003:1032020

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673374.1\|964897_966310_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IEP8	Erwinia_phage	6.6e-32	25.3
965450:965467	attL	NA	NA	NA	NA
WP_002833088.1\|966313_966868_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_002833090.1\|966886_967792_-	tyrosine recombinase XerC	A0A1I9SC88	Mycobacterium_phage	6.6e-17	29.7
WP_002833092.1\|967863_969936_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.3e-92	34.8
WP_011673375.1\|970245_970905_-	beta-phosphoglucomutase	NA	NA	NA	NA
WP_011673376.1\|970920_973173_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
WP_011673377.1\|973198_974542_-	SLC45 family MFS transporter	NA	NA	NA	NA
WP_011673378.1\|974685_975639_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_011673379.1\|975738_976599_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.5e-26	32.8
WP_011673380.1\|976639_977407_-	ribonuclease HII	E3T5H8	Cafeteria_roenbergensis_virus	2.3e-26	42.6
WP_011673381.1\|977393_978257_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_011673382.1\|979052_980387_-	hypothetical protein	NA	NA	NA	NA
WP_011673383.1\|980588_982619_-	hypothetical protein	NA	NA	NA	NA
WP_011673384.1\|983037_983364_-	hypothetical protein	NA	NA	NA	NA
WP_002833100.1\|983631_985746_-\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	1.5e-117	39.3
WP_011673385.1\|986029_988075_-	hypothetical protein	NA	NA	NA	NA
WP_011673386.1\|988061_988400_-	hypothetical protein	NA	NA	NA	NA
WP_148194166.1\|988401_989391_-	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA
WP_011673388.1\|989446_990100_-	WxL domain-containing protein	NA	NA	NA	NA
WP_011673389.1\|990255_991047_-	hypothetical protein	NA	NA	NA	NA
WP_011673390.1\|992276_992519_-	hypothetical protein	NA	NA	NA	NA
WP_011673391.1\|992636_993014_-\|holin	holin	A0A2K9VCG4	Lactobacillus_phage	7.4e-23	82.5
WP_011673392.1\|993023_993287_-	hemolysin XhlA family protein	E9LUR9	Lactobacillus_phage	6.1e-32	85.1
WP_049752780.1\|993286_994399_-	LysM peptidoglycan-binding domain-containing protein	O03950	Lactobacillus_phage	6.2e-33	61.3
WP_011673394.1\|994461_994821_-	hypothetical protein	E9LUR7	Lactobacillus_phage	6.6e-45	79.0
WP_011673395.1\|994854_995103_-	hypothetical protein	NA	NA	NA	NA
WP_011673396.1\|995115_995319_-	hypothetical protein	NA	NA	NA	NA
WP_011673397.1\|995311_995539_-	hypothetical protein	NA	NA	NA	NA
WP_011673398.1\|995531_998720_-	hypothetical protein	A0A1S5RCP2	Lactobacillus_phage	2.2e-27	48.6
WP_011673399.1\|998736_1001127_-	hypothetical protein	E9LUR3	Lactobacillus_phage	0.0e+00	69.5
WP_011673400.1\|1001147_1002914_-\|tail	phage tail family protein	E9LUR2	Lactobacillus_phage	3.6e-229	64.9
WP_011673401.1\|1002991_1007752_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2P0ZLG0	Lactobacillus_phage	0.0e+00	63.7
WP_011673402.1\|1007783_1007969_-	hypothetical protein	NA	NA	NA	NA
WP_011673403.1\|1008013_1008388_-\|tail	phage tail assembly chaperone	A0A2P0ZLH4	Lactobacillus_phage	1.4e-58	95.2
WP_011673404.1\|1008461_1009115_-\|tail	phage tail protein	A0A2P0ZLH1	Lactobacillus_phage	5.5e-106	90.3
WP_011673405.1\|1009130_1009511_-	DUF806 family protein	A0A2P0ZLF4	Lactobacillus_phage	4.6e-57	84.1
WP_011673406.1\|1009510_1009918_-	HK97 gp10 family phage protein	A0A2P0ZLE6	Lactobacillus_phage	7.9e-63	89.4
WP_011673407.1\|1009920_1010268_-\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	5.4e-44	73.9
WP_011673408.1\|1010257_1010590_-\|head,tail	phage gp6-like head-tail connector protein	E9LUQ4	Lactobacillus_phage	4.3e-43	83.3
WP_011673409.1\|1010663_1011896_-\|capsid	phage major capsid protein	E9LUQ3	Lactobacillus_phage	1.7e-209	91.7
WP_011673410.1\|1011895_1012651_-\|protease	Clp protease ClpP	E9LUQ2	Lactobacillus_phage	3.9e-124	93.2
WP_011673411.1\|1012628_1013792_-\|portal	phage portal protein	E9LUQ1	Lactobacillus_phage	2.7e-209	93.5
WP_011673412.1\|1013794_1013989_-	DUF1056 family protein	E9LUQ0	Lactobacillus_phage	4.8e-26	96.9
WP_011673413.1\|1013978_1015877_-\|terminase	terminase large subunit	E9LUP9	Lactobacillus_phage	0.0e+00	95.1
WP_011673414.1\|1015879_1016338_-\|terminase	phage terminase small subunit P27 family	E9LUP8	Lactobacillus_phage	3.0e-79	95.4
WP_080504382.1\|1016534_1017002_-	HNH endonuclease	E9LUP7	Lactobacillus_phage	1.5e-81	94.2
WP_011673416.1\|1017581_1018013_-	DNA-directed RNA polymerase sigma-70 factor	A0A0M7RDP0	Lactobacillus_phage	3.0e-12	34.6
WP_011673417.1\|1018003_1018396_-	hypothetical protein	NA	NA	NA	NA
WP_011673418.1\|1018475_1018940_-	hypothetical protein	NA	NA	NA	NA
WP_011673420.1\|1018991_1019324_-	hypothetical protein	NA	NA	NA	NA
WP_011673421.1\|1019324_1019696_-	hypothetical protein	NA	NA	NA	NA
WP_011673422.1\|1019710_1019851_-	hypothetical protein	NA	NA	NA	NA
WP_011673423.1\|1019860_1020079_-	hypothetical protein	NA	NA	NA	NA
WP_011673424.1\|1020075_1020486_-	RusA family crossover junction endodeoxyribonuclease	A8YQM5	Lactobacillus_phage	1.3e-41	58.1
WP_011673426.1\|1020602_1021421_-	ATP-binding protein	O03914	Lactobacillus_phage	1.8e-61	48.9
WP_011673427.1\|1021401_1022145_-	conserved phage C-terminal domain-containing protein	A7DYC7	Streptococcus_phage	6.1e-69	54.1
WP_011673428.1\|1022145_1022823_-	hypothetical protein	E9LUU3	Lactobacillus_phage	2.6e-82	64.3
WP_011673429.1\|1022833_1023232_-	single-stranded DNA-binding protein	D6PSU2	Lactobacillus_phage	1.4e-35	55.3
WP_011673430.1\|1023234_1023891_-	ERF family protein	A0A2H4JA34	uncultured_Caudovirales_phage	8.4e-22	33.7
WP_011673431.1\|1023887_1024349_-	hypothetical protein	NA	NA	NA	NA
WP_011673433.1\|1024574_1024841_+	hypothetical protein	NA	NA	NA	NA
WP_011673434.1\|1024797_1025055_-	hypothetical protein	NA	NA	NA	NA
WP_011673436.1\|1025152_1025362_-	hypothetical protein	NA	NA	NA	NA
WP_029258001.1\|1025688_1025910_+	hypothetical protein	NA	NA	NA	NA
WP_011673439.1\|1025934_1026135_-	DUF2829 domain-containing protein	A0A2H4J5N9	uncultured_Caudovirales_phage	3.7e-05	39.4
WP_011673440.1\|1026180_1026984_-	phage antirepressor	Q38330	Lactococcus_phage	1.1e-76	56.2
WP_011673441.1\|1026999_1027188_-	hypothetical protein	NA	NA	NA	NA
WP_011673442.1\|1027453_1027801_+	helix-turn-helix transcriptional regulator	Q9T1J3	Lactobacillus_phage	1.6e-16	41.4
WP_041526966.1\|1027804_1028215_+	ImmA/IrrE family metallo-endopeptidase	E9LUL3	Lactobacillus_phage	2.5e-16	39.2
WP_011673444.1\|1028278_1029406_+	hypothetical protein	NA	NA	NA	NA
WP_011673446.1\|1029974_1031048_+\|integrase	site-specific integrase	Q9ZXG6	Leuconostoc_phage	6.8e-45	36.0
1032003:1032020	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1062369 : 1071987

Staphylococcus_phage(37.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673470.1\|1062369_1063215_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.0e-16	35.2
WP_011673471.1\|1063451_1064189_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-33	39.9
WP_011673472.1\|1064185_1065637_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_099046115.1\|1065758_1066235_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	3.8e-24	38.8
WP_011673474.1\|1066272_1067223_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	3.4e-117	62.7
WP_011673475.1\|1067235_1069113_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.9e-51	30.5
WP_041526969.1\|1069115_1070324_-\|tRNA	CCA tRNA nucleotidyltransferase	G3MAR3	Bacillus_virus	3.5e-34	40.0
WP_002833200.1\|1070577_1071462_+	YitT family protein	M1Q1P6	Streptococcus_phage	2.1e-52	38.1
WP_002833201.1\|1071516_1071987_-	nucleoside 2-deoxyribosyltransferase	A0A1G5S9Z4	Enterococcus_phage	3.8e-16	40.1

DBSCAN-SWA_7

1433157 : 1441721

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673676.1\|1433157_1433739_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-22	34.7
WP_011673677.1\|1433735_1434785_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D8KLC2	Synechococcus_phage	5.2e-58	40.2
WP_011673678.1\|1434784_1436254_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.4e-56	32.3
WP_041526973.1\|1436238_1438446_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.7e-147	41.6
WP_011673680.1\|1438463_1439138_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_011673681.1\|1439140_1439395_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_011673682.1\|1439387_1440116_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SLB8	Cyanophage	9.6e-43	43.4
WP_011673683.1\|1440115_1441255_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_011673684.1\|1441238_1441721_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.6e-20	42.9

DBSCAN-SWA_8

1451081 : 1459949

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673692.1\|1451081_1452098_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-33	30.6
WP_002833272.1\|1452097_1452433_-	cyclic-di-AMP receptor	NA	NA	NA	NA
WP_002833271.1\|1452448_1453078_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.0e-52	52.7
WP_002833270.1\|1453242_1453842_-	recombination protein RecR	NA	NA	NA	NA
WP_002833269.1\|1453868_1454183_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_011673693.1\|1454198_1455944_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.8e-56	48.4
WP_011673694.1\|1456156_1456642_-	nucleoside deaminase	A0A2H4PQS8	Staphylococcus_phage	1.8e-05	31.6
WP_011673695.1\|1456634_1457240_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011673696.1\|1457451_1457682_+	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	8.0e-12	48.1
WP_011673697.1\|1457783_1459949_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.9e-249	59.9

DBSCAN-SWA_9

1688943 : 1699789

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011673827.1\|1688943_1690119_+	class I SAM-dependent methyltransferase	A0A2K9L4K8	Tupanvirus	4.8e-44	33.3
WP_002834110.1\|1690260_1690593_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_002834111.1\|1690613_1691402_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_011673828.1\|1691533_1692790_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.8e-07	23.3
WP_011673829.1\|1692970_1694107_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.8e-25	25.8
WP_002834114.1\|1694118_1694808_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.7e-37	37.3
WP_011673830.1\|1694890_1695388_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A2P1EI66	Megavirus	3.7e-14	37.3
WP_011673831.1\|1695518_1696661_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.4e-64	34.0
WP_011673832.1\|1696682_1697387_-	DUF1129 domain-containing protein	NA	NA	NA	NA
WP_002834120.1\|1697415_1698522_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_002834122.1\|1698738_1698924_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_011673833.1\|1698937_1699789_-	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	1.6e-12	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_008525

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection