Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NC_004193 Oceanobacillus iheyensis HTE831, complete genome 5 crisprs RT,csa3,DEDDh,cas3,DinG 2 1 8 0

Results visualization

1. NC_004193
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004193_1 1129749-1129829 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004193_2 2143412-2143487 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004193_3 2900644-2900730 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004193_4 3168885-3169178 Orphan NA
5 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NC_004193_5 3288655-3288730 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 2061678-2061708 0 1.0
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 2254237-2254267 0 1.0
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 2254293-2254323 0 1.0
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 2254349-2254379 0 1.0
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 2254405-2254435 0 1.0
NC_004193_1 1.1|1129774|31|NC_004193|CRISPRCasFinder 1129774-1129804 31 NC_004193.1 1163426-1163456 1 0.968
NC_004193_4 4.4|3169075|18|NC_004193|CRT 3169075-3169092 18 NC_004193.1 2665845-2665862 1 0.944
NC_004193_4 4.4|3169075|18|NC_004193|CRT 3169075-3169092 18 NC_004193.1 2665897-2665914 1 0.944
NC_004193_4 4.4|3169075|18|NC_004193|CRT 3169075-3169092 18 NC_004193.1 2666001-2666018 1 0.944

1. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 2061678-2061708, mismatch: 0, identity: 1.0

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagtcttcttttcaccattggc	Protospacer
*******************************

2. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 2254237-2254267, mismatch: 0, identity: 1.0

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagtcttcttttcaccattggc	Protospacer
*******************************

3. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 2254293-2254323, mismatch: 0, identity: 1.0

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagtcttcttttcaccattggc	Protospacer
*******************************

4. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 2254349-2254379, mismatch: 0, identity: 1.0

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagtcttcttttcaccattggc	Protospacer
*******************************

5. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 2254405-2254435, mismatch: 0, identity: 1.0

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagtcttcttttcaccattggc	Protospacer
*******************************

6. spacer 1.1|1129774|31|NC_004193|CRISPRCasFinder matches to position: 1163426-1163456, mismatch: 1, identity: 0.968

gacattcggcagtcttcttttcaccattggc	CRISPR spacer
gacattcggcagccttcttttcaccattggc	Protospacer
************.******************

7. spacer 4.4|3169075|18|NC_004193|CRT matches to position: 2665845-2665862, mismatch: 1, identity: 0.944

tttcggtttctcctgttt	CRISPR spacer
tttcgatttctcctgttt	Protospacer
*****.************

8. spacer 4.4|3169075|18|NC_004193|CRT matches to position: 2665897-2665914, mismatch: 1, identity: 0.944

tttcggtttctcctgttt	CRISPR spacer
tttcgatttctcctgttt	Protospacer
*****.************

9. spacer 4.4|3169075|18|NC_004193|CRT matches to position: 2666001-2666018, mismatch: 1, identity: 0.944

tttcggtttctcctgttt	CRISPR spacer
tttcgatttctcctgttt	Protospacer
*****.************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NC_004193_2 2.1|2143436|28|NC_004193|CRISPRCasFinder 2143436-2143463 28 NZ_AP019659 Vibrio ponticus strain DSM 16217 plasmid pVPon1 14307-14334 7 0.75
NC_004193_2 2.1|2143436|28|NC_004193|CRISPRCasFinder 2143436-2143463 28 MK448469 Streptococcus satellite phage Javan396, complete genome 15832-15859 7 0.75
NC_004193_2 2.1|2143436|28|NC_004193|CRISPRCasFinder 2143436-2143463 28 MK448475 Streptococcus satellite phage Javan403, complete genome 16113-16140 7 0.75

1. spacer 2.1|2143436|28|NC_004193|CRISPRCasFinder matches to NZ_AP019659 (Vibrio ponticus strain DSM 16217 plasmid pVPon1) position: , mismatch: 7, identity: 0.75

cttttttatcgctctcataattttttgg	CRISPR spacer
tctttttatcgctctcatcacttttatt	Protospacer
..**************** *.****   

2. spacer 2.1|2143436|28|NC_004193|CRISPRCasFinder matches to MK448469 (Streptococcus satellite phage Javan396, complete genome) position: , mismatch: 7, identity: 0.75

cttttttatcgctctcataattttttgg	CRISPR spacer
aagttttatctctctcattattttttca	Protospacer
   ******* ******* ******* .

3. spacer 2.1|2143436|28|NC_004193|CRISPRCasFinder matches to MK448475 (Streptococcus satellite phage Javan403, complete genome) position: , mismatch: 7, identity: 0.75

cttttttatcgctctcataattttttgg	CRISPR spacer
aagttttatctctctcattattttttca	Protospacer
   ******* ******* ******* .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12071 : 20309 7 Lactobacillus_virus(33.33%) tRNA NA
DBSCAN-SWA_2 226975 : 267103 33 Bacillus_phage(53.33%) tail,holin,protease NA
DBSCAN-SWA_3 407938 : 417467 8 Bacillus_virus(42.86%) NA NA
DBSCAN-SWA_4 788654 : 798354 9 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 1778518 : 1783458 7 uncultured_Mediterranean_phage(16.67%) NA NA
DBSCAN-SWA_6 2041604 : 2051751 8 Bacillus_phage(33.33%) tRNA NA
DBSCAN-SWA_7 2474353 : 2483372 8 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_8 3067160 : 3073752 6 Clostridium_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage