CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NC_003080	Corynebacterium jeikeium K411 plasmid pKW4, complete sequence	0 crisprs	NA	0	0	0	0
NC_007164	Corynebacterium jeikeium K411, complete genome	4 crisprs	DEDDh,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,WYL,csa3	0	50	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NC_007164_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007164_1

313229-313303

Orphan

Consensus_repeat	Method
TACGGCTTCGGTGCGCTCTTCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007164_1

>merge|NC_007164|1|313229-313303|CRISPRCasFinder
TACGGCTTCGGTGCGCTCTTCCGGCTCGCTGTCGGCGAAGGGGTCGAATTCTACGGCTTCGGTGCGCTCTTCCGG

>NC_007164|1|1|313229-313303|CRISPRCasFinder
TACGGCTTCGGTGCGCTCTTCCGG	CTCGCTGTCGGCGAAGGGGTCGAATTC
TACGGCTTCGGTGCGCTCTTCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007164.1\|WP_005296954.1\|302456_303257_+\|phosphoadenylyl-sulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NC_007164.1\|WP_011272969.1\|305428_306157_+\|CbiX/SirB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|239509
NC_007164.1\|WP_011272975.1\|315938_316994_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213235
NC_007164.1\|WP_011272964.1\|298565_299987_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|215457
NC_007164.1\|WP_011272970.1\|306226_307240_+\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NC_007164.1\|WP_005296910.1\|322562_322775_+\|DUF3263-domain-containing-protein	unknown	unknown	gnl\|CDD\|378688
NC_007164.1\|WP_011272968.1\|304167_305427_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|225448
NC_007164.1\|WP_011272976.1\|316993_317806_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NC_007164.1\|WP_011272965.1\|300302_301997_+\|nitrite/sulfite-reductase	unknown	unknown	gnl\|CDD\|223233
NC_007164.1\|WP_005296935.1\|313316_314402_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270408
NC_007164.1\|WP_005296925.1\|317892_318435_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NC_007164.1\|WP_077536141.1\|321955_322564_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|237227
NC_007164.1\|WP_041626047.1\|314401_315862_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_173362248.1\|307429_308848_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NC_007164.1\|WP_011272977.1\|318604_320116_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NC_007164.1\|WP_005296957.1\|302000_302210_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_011272979.1\|320931_321963_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NC_007164.1\|WP_011272978.1\|320119_320920_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197320
NC_007164.1\|WP_011272972.1\|308990_310202_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NC_007164.1\|WP_035004792.1\|303253_304168_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375

Protein	Function_ID	Function_description	E-value
NC_007164.1\|WP_005296954.1\|302456_303257_+\|phosphoadenylyl-sulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.29859e-93
NC_007164.1\|WP_011272969.1\|305428_306157_+\|CbiX/SirB-N-terminal-domain-containing-protein	gnl\|CDD\|239509	cd03416, CbiX_SirB_N, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.	8.91855e-23
NC_007164.1\|WP_005296925.1\|317892_318435_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	1.07457e-13
NC_007164.1\|WP_011272972.1\|308990_310202_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NC_007164.1\|WP_011272964.1\|298565_299987_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|215457	PLN02852, PLN02852, ferredoxin-NADP+ reductase.	3.67324e-123
NC_007164.1\|WP_011272970.1\|306226_307240_+\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	9.64561e-31
NC_007164.1\|WP_011272968.1\|304167_305427_+\|GTP-binding-protein	gnl\|CDD\|225448	COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism].	4.09933e-175
NC_007164.1\|WP_011272976.1\|316993_317806_+\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	2.04969e-06
NC_007164.1\|WP_011272965.1\|300302_301997_+\|nitrite/sulfite-reductase	gnl\|CDD\|223233	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism].	3.02505e-177
NC_007164.1\|WP_005296935.1\|313316_314402_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270408	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold. This group includes periplasmic glutamate-binding domain GluB from Corynebacterium efficiens and its related proteins. The GluB domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.86664e-66
NC_007164.1\|WP_005296910.1\|322562_322775_+\|DUF3263-domain-containing-protein	gnl\|CDD\|378688	pfam11662, DUF3263, Protein of unknown function (DUF3263). This family of proteins with unknown function appears to be restricted to Actinobacteria.	2.54338e-22
NC_007164.1\|WP_077536141.1\|321955_322564_-\|peptide-deformylase	gnl\|CDD\|237227	PRK12846, PRK12846, peptide deformylase; Reviewed.	3.17024e-72
NC_007164.1\|WP_011272978.1\|320119_320920_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	7.66245e-102
NC_007164.1\|WP_173362248.1\|307429_308848_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NC_007164.1\|WP_011272977.1\|318604_320116_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	1.82679e-121
NC_007164.1\|WP_011272979.1\|320931_321963_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.64815e-14
NC_007164.1\|WP_011272975.1\|315938_316994_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	1.96107e-100
NC_007164.1\|WP_035004792.1\|303253_304168_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0

>NC_007164.1|WP_011272972.1|308990_310202_+|acetate-kinase
MTKYVLVLNSGSSSIKFQVLDPEANATADPFVSGIVEKIGEKKGHIQIQTETSKMEDNRPILSHSVGLERAFGMMTLLGVGPQDLDLVAAGHRVVHGGATFTEPVLIDDEVIEQLKELIPLAPLHNPANIDGIENARALLEHVPHVAVFDTAFFSTLPEHAANYAIKKDIADEYNIRRYGFHGTSHEYVSSKVPDLLGKPAEEVNQITLHLGNGASAAAIRGGEAVDTTMGLTPLAGLVMGTRSGDIDPGIIFHLARSGGMTVDQADKLLNRESGLKGMAGVNDFRELKTLIEDGDENAQLAYDVYIHALRRFIGSYMLILGGVDAIVFTAGVGENAVQVRRDAMADLQNFGIEIDDARNENSEGIVGAREISTDDSTVKVFVVPTNEELAIARQATELAEQQ
>NC_007164.1|WP_173362248.1|307429_308848_+|phosphate-acetyltransferase
MEALGEAEAVDIFDTIRPSAPDFAAALDAAYGAQASASASAGAGAVLLGTGEINFDSRLAAAAGASHYLLAGSPADATALQLASGQLVRSGRKPAGISFIDANASAGAAAANAVEAEGQAIRHIALEGIAEAAAGTNGESAAKEPVIGPELFERNLLIKAREKDAHIVLPEGDDDRILTAADQLLRAKVCRLTILGNPDEIAGRAKELGLDLSGATLTDPSEGNQLEEFATEFAELRKHKGITLEQARETMQDISYYATMMVHKGIADGMVSGAAHTTAHTIKPSFQIIKTAPGASVVSSIFLMVMDGVLWAFGDCAVNPNPTSDQLAEIAAVSAKTAAQFGIEPKVAMLSYSTGTSGAGEDVEAVAAAVKKAQEDNPDLPLDGPLQFDAAVVESVGQKKLPGSDVAGQATVFVFPDLNCGNITYKAVQRTADALAVGPILQGLNKPVNDLSRGATVPDIVNTVAITAIQAK
>NC_007164.1|WP_011272970.1|306226_307240_+|sulfite-exporter-TauE/SafE-family-protein
MKILIFALVGVVAQLVDGALGMAFGITATTLLIFSGLGPAHASAAIHLAEVGTTLFSGLSHWRLKNVHWPTVLALGVPGAFGAFMGAYVLSNLSTEAAEPVVSTLLVLLGAYVLVRSVAVPWKKNENTQPVSTTRRSRLGLAGLGLAGGFLDASGGGGWGPVTTSTLMSVGKAEPRRIIGTVNTAEFLVAISATAGFVTGMGSELADNWQPVVGLLVGGAIAAPIAAWIVTIMKPEVLGGVVGGLLMLLNSSRLVNYFGFLGVVAVILFGLAVIVALVVVRKRSLLERSLTGDDAPEDSQQATAESDAEATAGRTSGRHYEGEGTKVQQREKERARG
>NC_007164.1|WP_011272969.1|305428_306157_+|CbiX/SirB-N-terminal-domain-containing-protein
MTRPAPIICLAHGSRHPQADQAVFEIAERISESTGLPAFAAFLDFHPATLTTVAHRVVAAGYSEAVVVPLLFTQAFHARFDVPAAIAEAVESIDATSSARLTLHLTDGLGTGADMEELVADFTAQYLAGSSADSTDKLALYSVGSSQPGANEAVAEFAGRVGARLNMRSTRAFVATGNNPGCDTEALLKFADERTVTVPLFVSPGLLWDKAKIRMPNGWKCTRHLGDAVAPVVINRACRALQ
>NC_007164.1|WP_011272968.1|304167_305427_+|GTP-binding-protein
MSTNLPTLRLCTAGSVDDGKSTFVGRLLHDTKSILADQYESVERVSNAKGLENPDLSLLVDGLRAEREQGITIDVAYRYFATDKRSFILADTPGHVQYTRNTVTGLSTSELVIVLVDARNGVIEQTRRHLTVAAMMKISHVIVAVNKIDAVDFSEQVFNDVKSDVDALVSELGLAHVDVIPTSALLGDNVVERSQNTPWYTGPSVLEILETTEPAKNIADVERGLRFPIQIVIRDHATDYRGYAGRITAGKVSVGDKVLADGREAIIEGIDGPAGEQQTATRGESVSLRLDRDIDLSRGDIIAAPDLPEPQQSFTATVFHLSESPVRLRSNVLVRYGTALVRGRVDEVIRRVDISGQNRSEEEIAHGSADELALNDIAEVRVTVAEPLPVETYRRGGRVGSLLLINPGSGDTLTAGLVN
>NC_007164.1|WP_035004792.1|303253_304168_+|sulfate-adenylyltransferase-subunit-2
MSNENTTALSPHLASLEAEAIEILREVAGQFDRPALLFSGGKDSVVVLELAKRAFHPAPVPFELVHVDTGHNFPEVIEFRDKIAADPKVTLHVAAVQDWIDSGAIQERPDGTRNPLQTVPLVETIQNRGYDAVLGGARRDEEKARAKERVFSVRDSFGGWNPRRQRPELWGLYNGRHQVGENIRVFPISNWTEADVWDYIRDRNVEVPAIYYSHQREVFNRNGMWLTPGEWGGPKEGEELVEKTVRYRTVGDMSCTGAVLSTATTIEDVIDEIRQSTTTERGATRADDKLSESSMEDRKKEGYF
>NC_007164.1|WP_005296954.1|302456_303257_+|phosphoadenylyl-sulfate-reductase
MSLVDATGLLGGNSDDFRDPAESPQGAPTKTTPLSDEERAANEQLVAEWNDKLEGASAEEIMEWVAEHVPGKVAVTMSMQDTVLAELAEGRLAEDRAELVFLDTGYHFAETLETRDKVQQRYNLPLENITPVLNREEQDKVYGPRLYSRDNTACCRMRKVEPLARMLNPFNAWITGVRRVDNALRANTPVLDVDRTGRLKINPIVAWSDEDVEAYINDHDLIINPLTKQGYPSIGCETCTLPVAPGQDPRSGRWAGSNKTECGLHT
>NC_007164.1|WP_005296957.1|302000_302210_+|hypothetical-protein
MSVPDKDSLPSVNEQVGGRVGHPNARRATVNNCPYCMSQNLFPDAETDNAWQCRECMRVFSVKFHGQLL
>NC_007164.1|WP_011272965.1|300302_301997_+|nitrite/sulfite-reductase
MSTGTSTEEKPARPRRKKQRKPQGQWAVDGREPLNDDERVKQEDPGISVMQRIRDIYSKEGFDSIPAEDLAPRFKWVGMYTQRKQGLDGEKTSTLTNTELQDNYFMMRIRLDGGVVSSEGLRTIGEISEKYARNTADFTDRQNVQLHWIRIEDVPTIWDELAKVGLDSFFGCGDVPRVILGSPVAGIAKDEIIDGRPAIEKIKKELLPDPEFGNLPRKFKSAISGHARQDVTHEIQDLAFIGSEHPEHGPGFDVWVGGGLSTNPMLAQRLGVWVPIDEVPEVWAGVVRIFRDYGYRRMRNRARLKFLVADWGVEKFREVLENEYLKRPLLDGPEPEEYPGYRDHVGLHEQKDGRFYLGVKPTVGHTDGKQLQRLADLAEKHGTSNIRTTPDKELLFLDLEREAAEALAADLEELGLSAKPSAFRRDIISCTGLEFCKLAHVVTKQRAIALVDELEDRLGDLDVPLKISLNGCPNSCARTQVADIGLSGKILTTDEGERVEGFQVHLGGTIGLEPHFGKKVRGNQVFSKDLGDYVVRVVENFKSHRTEGEEFRDWVVRADDELLV
>NC_007164.1|WP_011272964.1|298565_299987_-|FAD-dependent-oxidoreductase
MPENRPLRIAVIGSGPAGIYASDALTKSEADVSVDIYERMPAPFGLIRYGVAPDHPRIKGIIKSLHKVMDKPEIRLFGNINVGEDITVDELKQFYDAVIYATGATDDRPLNIPGGEHTIGAGEFVGFYDANPYFEDKWDLSADSVAVVGVGNVGLDVARVLAKTGEELKVTEIPDNVYDSLKENQAKEIHVFGRRGPAQAKFTPLELKELNDSDTIEIVIDPEDIQYDEGSEQARRASKIQDMVCTRLEQYAIADPKGAPHKLYIHFFESPVEVKTDAEGRVTAFVTERTELNGDGSVSGTGKLTEWPVGAVYRAVGYKSDEQPGLPWDERQNVLPNVGGRVLTEGPTADGIAGVPGSADPEAEKRERLPGVYTTGWVRRGPVGLIGNTKGDANEAVANLLEDAANGIGFNPEKPDLEAVEAFLEEKGIAHTTWEGWYSLDKHERELGEAEGRERKKVREWDEMLHHSQGKNV
>NC_007164.1|WP_005296935.1|313316_314402_-|transporter-substrate-binding-domain-containing-protein
MRKQAFKPVVAALSTAAITLTSACSTDSPRLPEWPSVQHNASDDLPYGATYVQPHEVPSDGDAAADTNTDIDNTGDEEPFGSIKPDTREPKERVPQIMRRGRLVVGVAQSLNRLGFRDPVSGDVAGFEVDLAREIARDIFGDPNRIEFRYVESRERAEALKSGDVDIVVRTMSPTLSRQSKLEFSIPYLQVHSRLLVLSDSQIESFNDLHNKTVCVTRDSTSAVRVKQYDVGRLLLTQAWTDCLMAMQRFQADAIFTDDAILTGLRAQDPYTTLVADAPETSYYSVAISPPGFPKNTTGLVMQVNSTMERIRRDGTWKNLYNTWLADYLGPASSLPIKYRTEEETKELNKIRRKAANGDAE
>NC_007164.1|WP_041626047.1|314401_315862_-|hypothetical-protein
MAMPPVTAFEADRWMDSEEHPTGRGSSFKGISFKGVMNPALEAPRRFFKFASTSPGLLTIVSTILVLAILAAGGAMVYSSQNRQAQLNTLVSRTEPLSDAAQELFNSLSVADSVATTSFLRKSTTNAATRDYDAAMSSASMAIIRATSGIDDIESREMELVLQIQNSMPDYLKLMSNAQTHDRLRNPVGASYLAQASTLMQDTMLPAAQELYSRTSEEVSTQQAKLSSPLWFPLSGIVAAIIMLVIAQFWLAALTNRRLNLGYVGATGLMLFALVWASLSAALTWHAGNQNVQGTVRPLEQLTAVRISVQQSRTQEALGLIQRDYGEDRQQEFSDSMADIDSKLEGLRNQVSHPERIDTAREALRSWDESHAKMVSELKNGRYTEALAAALDTKVPEENKDGKDKTDKAGRNGKDDPLATGEDTSDFTVVDNEMQELISSTRAELRDILVEGRTAAGHVTNLVLALTVLSALCVFFGTRPRLQEFL
>NC_007164.1|WP_011272975.1|315938_316994_+|ABC-transporter-ATP-binding-protein
MITVSSLTKAYKGNTVVNDLNFEVTPGIVTGFLGPNGAGKSTTMRMIVGLDEPTKGTARIDGKAYSEYKRPLEKVGTLLDAKWVHPNRSAAAHLRWVAAANGFSKKRVDEVLGIVGLSDVAGRKAGKFSLGMGQRLGLACALLGDPEVLILDEPVNGLDPEGIRWVRDFVRALAREGRTVLISSHLLSEMAQTADHLIVIGKGRLVANQSTHEFIKSTSEVSTVVRTDHIAEMKAALTEESVAFQEGKDLDGRPTLTIPQQESDWIGALAYSYGLRLRELSEKRPSLEDAYLRMTQEHVEYHASVEPEKTEASKTEPAGGRHKEKSAPESSAKENSEATGNAVRVQKEGDK
>NC_007164.1|WP_011272976.1|316993_317806_+|ABC-transporter-permease-subunit
MVNLIKSELIKIRSTKALWWTSGLILFFSLGFALLNGAMTGSLLTSDEAKKDPELYMSVAAGIGSDMGLSGFLSFGMMIVMIQAVMLVTTEYGANTSKITLLATPTRWQVPIAKFLVYGVIASILALISNVLGTILASWSLGWKLEEEELLGKVGLGADGLWEQIGRIELYLLLTIAAAIGVGYLVRNTAGGIAIMLLWNLVIEGTLVQLVPKIRDWLPPYMPFTNADAYTGMRDLDGAPWGQTGSILYFAAWCVVLFVVGLVTLKKRDA
>NC_007164.1|WP_005296925.1|317892_318435_-|winged-helix-turn-helix-transcriptional-regulator
MTPSPQKPPQTPSHPPVRGRKAPEILPEIDVSEIATAVYDFLSATRRLMERPNQSLEISQSEIEVLQFISQHPGCGVSDVARLRFLRASNVSATVRRLINGGLIRRQANPEDKRAQDLYLTDEGVDMMNSITDEWALIITKATDRMDARDIAKLRRGVPALRNLSLAAESLVDDLQRNPD
>NC_007164.1|WP_011272977.1|318604_320116_-|cardiolipin-synthase
MPFPDLLGLFSEFTDDLQWWQVTLVVLDYALKIFALGWVPKERRPTSAMAWLLAIFLIPFIGIFLFLLMGSPAINRRRHRIQNQANELIRTMSADEPDVPEGSELSDELRSLVRLNRELTALPAVNGTMQALHSDYEESIAAMACAVDSAEDYVNVEIYIMAWDDTTNPFFEALGRAAQRGVTVRVLWDHIGAHKYKGNKKLGKKLKAMGVDWQVMLPLQPFKWRFRRPDLRNHRKLVVVDGRVAFMGSQNMIEAPYQKAKNHKIGREWVDVMAELTGPIVTTINSVFAVDWYTETNEELDLINPTDVKQRLDTNNEDTGADIMQIVPSGPGFTTEPNLRLFTSIAHHAKHTLKLISPYFIPDESLMEAVTTACYRGVRVELYVSEKSDQPMVGHAQASYYSELLKAGVHMYLYPYPKVLHSKFAIADGEVAVMGSSNMDMRSFGLNYEISLMVGKGELLDALRSLTDDYRERSALLTAEQWSTRPLHKQYVDNVARLTSALQ
>NC_007164.1|WP_011272978.1|320119_320920_-|endonuclease/exonuclease/phosphatase-family-protein
MRIATWNINSVRTREDRVREFLQRSEVDVLCLQETKCTDKQFPDFTDTGYEQAHFGLHSFNGVAILSRVGLADVQTDFGQPGFNKDLDAEQALEARAIGATCGGVEVWSLYVPNGREIADPHYSYKLRWLDALAAYAAGSGVGASQRKSSEKLCLVGDYNIAPRDEDVWDRSYFDGRTHVTPNERARLRALEDAGLSAATDLIANEYTYWDYQAMRFQKGEGMRIDLQYARGITPTAARVDRDERKGKGASDHAPVIVDYNVDGED
>NC_007164.1|WP_011272979.1|320931_321963_-|GNAT-family-N-acetyltransferase
MNKDTTFSAAHAGARYVEGFGFPISRRTDPVSIRPGTRVVVRYRVPSDAASNGATGAVTDAIGVLRSINPLQVEDVVIADEDVVVLKTLSAKPVRNSDIRALEAAKAAAFPGIDNQMIGGWLARAGDGITERSNSAVPIGPSAGLQEVPLAQLEEFYRSHDLPCQLMIPDRIGRPAEHLPGVRGPEILVMSKELGSPTESQTLAPSLADAQIELTVDDTPDADWLSMYKFRGQPLPKKALDLLCHRIDGQLGFARLMVDGQLAAITRATITDGWLGYSAVAVAPEFRRRGLGTLLCQHLLSWGADNGADRAYLDVIDSNTAGKALYHKLGFSEHHRSRSLRTR
>NC_007164.1|WP_077536141.1|321955_322564_-|peptide-deformylase
MELDSRLSVMTIMPIVICGDPVLHNPTTKVDPSEIPDLAPLIADMYETLSAANGVGLAANQVGVNKRFFVYDCPDTERGEMRRGCVINPVLETSEIPETMPDEEEDEEGCLSVPGYSFPTGRADWARVTGLDENGEEVTVEGTGFFARCLQHEVGHLDGFLYIDTLIGRWKRKSKKAVKAEGWDHAGNTWTPGVDEDPFGHE
>NC_007164.1|WP_005296910.1|322562_322775_+|DUF3263-domain-containing-protein
MLSDREIAILEFERRWWLDTSAKNEHIRGEFGVDPVRYFQQLNRLIERPEALDFDPVLVRMLLRRRDEEL

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Click the colored protein region to show detailed information

Crispr_ID: NC_007164_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007164_2

767607-767705

TypeI-E

Consensus_repeat	Method
TGGCCACCCCGGTGATCCTGCTGG	CRISPRCasFinder

1 spacers

cas2,cas1,cas6e,cas5

The CRISPR arrays of NC_007164_2

>merge|NC_007164|2|767607-767705|CRISPRCasFinder
TGGCCACCCCGGTGATCCTGCTGGCGATGATCCCGCCGCTGCAGTTCGACTACTGGCAATGGGTCAGCTTCGCCCTGGCCACCCCGGTGATCCTGTGGG

>NC_007164|2|2|767607-767705|CRISPRCasFinder
TGGCCACCCCGGTGATCCTGCTGG	CGATGATCCCGCCGCTGCAGTTCGACTACTGGCAATGGGTCAGCTTCGCCC
TGGCCACCCCGGTGATCCTGTGGG

Protein	Signature genes	Signature genes Name	Protein_function
NC_007164.1\|WP_077536150.1\|777149_777473_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NC_007164.1\|WP_041626322.1\|756295_757996_-\|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|225186
NC_007164.1\|WP_005296236.1\|772639_772831_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_011273265.1\|760213_760456_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_005296216.1\|779092_779800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187776
NC_007164.1\|WP_011113078.1\|762298_763537_+\|IS256-like-element-IS3506-family-transposase	unknown	unknown	gnl\|CDD\|307151
NC_007164.1\|WP_158306307.1\|754596_755940_+\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NC_007164.1\|WP_011273272.1\|770601_771264_-\|Ltp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377866
NC_007164.1\|WP_035011232.1\|772918_773209_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371092
NC_007164.1\|WP_005296256.1\|765032_765347_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_011273274.1\|777469_778411_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_007164.1\|WP_011273268.1\|765504_766605_+\|S-(hydroxymethyl)mycothiol-dehydrogenase	unknown	unknown	gnl\|CDD\|132492
NC_007164.1\|WP_011273267.1\|763699_764908_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_005296245.1\|769434_769713_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376835
NC_007164.1\|WP_158306311.1\|769756_770359_-\|Ltp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377866
NC_007164.1\|WP_147292236.1\|760737_761394_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_011273273.1\|771417_771972_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_041626111.1\|758224_760204_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NC_007164.1\|WP_011273275.1\|778421_779096_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NC_007164.1\|WP_011273269.1\|766647_767289_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792

Protein	Function_ID	Function_description	E-value
NC_007164.1\|WP_077536150.1\|777149_777473_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.94947e-42
NC_007164.1\|WP_041626322.1\|756295_757996_-\|GMC-family-oxidoreductase-N-terminal-domain-containing-protein	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.34587e-56
NC_007164.1\|WP_005296216.1\|779092_779800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.31685e-52
NC_007164.1\|WP_011113078.1\|762298_763537_+\|IS256-like-element-IS3506-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	2.32272e-157
NC_007164.1\|WP_158306307.1\|754596_755940_+\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	4.96918e-74
NC_007164.1\|WP_011273272.1\|770601_771264_-\|Ltp-family-lipoprotein	gnl\|CDD\|377866	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	9.8073e-12
NC_007164.1\|WP_011273274.1\|777469_778411_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.55116e-141
NC_007164.1\|WP_011273268.1\|765504_766605_+\|S-(hydroxymethyl)mycothiol-dehydrogenase	gnl\|CDD\|132492	TIGR03451, S-hydroxymethylmycothiol_dehydrogenase, S-(hydroxymethyl)mycothiol dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. [Cellular processes, Detoxification].	0
NC_007164.1\|WP_005296245.1\|769434_769713_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|376835	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor. This is a family of metal-sensitive repressors, involved in resistance to metal ions. Members of this family bind copper, nickel or cobalt ions via conserved cysteine and histidine residues. In the absence of metal ions, these proteins bind to promoter regions and repress transcription. When bound to metal ions they are unable to bind DNA, leading to transcriptional derepression.	5.09269e-32
NC_007164.1\|WP_158306311.1\|769756_770359_-\|Ltp-family-lipoprotein	gnl\|CDD\|377866	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	6.89518e-17
NC_007164.1\|WP_041626111.1\|758224_760204_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NC_007164.1\|WP_011273275.1\|778421_779096_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	9.02998e-70
NC_007164.1\|WP_035011232.1\|772918_773209_+\|hypothetical-protein	gnl\|CDD\|371092	pfam10496, Syntaxin-18_N, SNARE-complex protein Syntaxin-18 N-terminus. This is the conserved N-terminal of Syntaxin-18. Syntaxin-18 is found in the SNARE complex of the endoplasmic reticulum and functions in the trafficking between the ER intermediate compartment and the cis-Golgi vesicle. In particular, the N-terminal region is important for the formation of ER aggregates. More specifically, syntaxin-18 is involved in endoplasmic reticulum-mediated phagocytosis, presumably by regulating the specific and direct fusion of the ER with the plasma or phagosomal membranes.	0.00987693
NC_007164.1\|WP_011273269.1\|766647_767289_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	3.32167e-48

>NC_007164.1|WP_011273269.1|766647_767289_+|MBL-fold-metallo-hydrolase
MSKQRLENPQIEQFETSGKFRLDGGEWDVDNNVYLLVNGDKCIVVDPAHDAQTVIDHVGDRTVEAILLTHAHNDHCELAPELAKKWGVEVYLHPDDRMLWEESNGDAPFTPIDVEDPRWADWGVRLYHTPGHSPGCIVVEVPGQHALLSGDTLFNGGPGATGRKYSSFPTIIESLQSKVFILPHDMKVYPGHGDTTTVGAEAARIEEYIERGY
>NC_007164.1|WP_011273268.1|765504_766605_+|S-(hydroxymethyl)mycothiol-dehydrogenase
MTTTVKAVISRAKNEPVELTDIVIPEPGENDVIVRIQACGVCHTDLAYRDGGIADNYPFLLGHEAAGVVEQVGDRVTHVEVGDYVVLNWRAVCGQCRACKKGEPKYCFDTHNASKKMTLTDGTELEAALGIGAFAEKTLVHEGQCTKVDSEADPAVAGLLGCGVMAGLGAAVNTGEVKRGESIAVIGVGGVGMAAIAGAAVAGATKIIAIDISDAKLARAKEEFGATHTINSSGLSDDELVEKVQEINGGFGVDVAVDAVGVPQTYKQAFYVRDLAGRVVLVGVPTPDMTLELPFLDVFSHGGALKSSWYGDCLPERDFPMYVDLYQEGRFPLDRFVDDRISIDGVEDAFEKMKQGKVLRSVVEFK
>NC_007164.1|WP_005296256.1|765032_765347_-|hypothetical-protein
MIQLVVGAAAGYLMGTKAGRRRYEQIRRGYQSAVNSDITKAVVRSGRKALANRLDPEPRMHEVRDLNRSTRDSLGEGHTIVEADDAHPNDRIESPKRAPKNPFK
>NC_007164.1|WP_011273267.1|763699_764908_+|hypothetical-protein
MQGAGPSQGVERWELRPQQLIFDGNGKTWENASEVVSYVPMLRNWMPECTELIDSDYRDDKNWLGINLKKPKTIPFKGQLNHRIVIEARTEPIGTGKGLQAFSIARIITKLEKPEERDVALGEHSAILDFLSIIYGQPIGFSERSVSSSSNPVLDFNHRPIDPDYWKECRVETLGNKDALLDIEKGRNPEALIHYSTENPEVFSRWLEFWANNRPGVDALKRALSEKMSWENRLLNVAVAVEEFGHRIPGQVERGTVDNCFPVYLKRICLSMPRIAMLHPVQWASRFNTAYKGIKHADKDYPEFAEIVRTAEQGINWLRAWCCFQVDPHNPIMDYTWSRITNIEEFYPKSQDELDNDNWAILLTDEEWKQESARLTKANSSFRWNYADIDVLDTSDQNSDDE
>NC_007164.1|WP_011113078.1|762298_763537_+|IS256-like-element-IS3506-family-transposase
MTAAPYSIDPTTYLDDLLAQASPDLMRQMLQGFINQILSAQADTVCGAEYGVVSTERVNHRNGYRHRDLDTRVGTIDVAVPKLRHGAFFPDWLLERRSRAERALSTVIATCYLKGVSTRRMNDLVATLGISSMSKSQVSRMSEELDDMVADFKNRPLDPGGYAFLSCDALTIKVREGGRVVKCSVLLATGVNADGYREMLGMHVATAESNASWKGFFQDLKARGLTGVFLITSDAHEGIQHAISEVLPNASWQRCRTHFAKNLYEKVPKTQWPMVSAMFQTIFQQPDATSTWAQAREVVDLLEPKFPHVAAYLEESLDEVLAFTAVPKPVWTKVWSNNPTERLNREIRRRTDVVGIFPNRESIIRLVGAVLAEQHDDWIQQKRYMSLTALEHTKHLMHHPGEHRDDHHQLTA
>NC_007164.1|WP_147292236.1|760737_761394_+|hypothetical-protein
MNKHGIEATISLAQKMAATRGWDEDSEYLQPRAVPIADVVGDFMKPSEDFSVELKGTIWLDTLSDSKAFTLLASPLTSLFEYTIEGRDPRSNLDLLPTPWSNPHHGSTQGNRTYVPRGDMHTPPSLVFFQRLPIWGQINNSSPERLVPTEAWYLPIGFTIVRCASLDGFSSTDMIIDHWGRYLVFYRQVVNEEKVVEMRVTQAQRKQDPRNSPLVRNY
>NC_007164.1|WP_011273265.1|760213_760456_+|hypothetical-protein
MENYALTLFLNSNPVAPLDRGSIGQHKWPKFVIVPDFEYLRRTKLGEDSWTQTFTVDELPDRIDQLIFLAGQETITTDEE
>NC_007164.1|WP_041626111.1|758224_760204_+|DNA-primase
MAKGRIPERDIEAIREQTPIEEVVGEYVQLKPGGVDSMKGLSPFKDEKTPSFHVRPNHGYFHCFSTDQGGDVFKFLMLMEHMSFPEAVEACAERIGYRISYEGGRPGNREEPGTRRRLVAANKAAFEFYRKEFLGDAEGADVARNFLIERGFTMEHAEQFGCGYAPAGWDRLTKHLQQKGFTFKEIEAAGLGRMGKRGPIDRFHRRLLWPIRSVSGDVIGFGARKLFDDDRLGKYLNTPETMLYKKSKVLFGIDQAKRNVVAKHQAVVVEGYTDVMAMHAAGVDTAVAACGTAFGAEHLAALRRFMLDDQFFRGEIIYTFDGDEAGQKAAMRAFEGDQQFSGRSYVTVAPGGQDPCDVRIKRGDAAVRELVASRIPMFEFVIRTLIADYDTASIDGRVHALRRIVPVLAGIKDDALRDEYARQAAGWVGWDNPNDVLDQVRKEARKSGGQRPKLELKTGAGAAGGAGGSRAGAAGAAGTGSAGGPNLHVVKGMERPNPNDDYLEGPREVMKLALQEPQLASTIFDLMPPESFVHPTYVAMAEAVASLGGAANSNGGAGWIERIAAQMKDPMGAAVVSELAVEDLHCLPERLPYYADAIMARMQERWVGSEIADMKSRMQRMRPDLQKEEYNALFADVIALEKYRRSLHERASDFGDFTR
>NC_007164.1|WP_041626322.1|756295_757996_-|GMC-family-oxidoreductase-N-terminal-domain-containing-protein
MLIIGSGFGGSTTALRLVEKGYKVGILEAGRRFKDEEFAKNSWHLKDFLWMPQIGLYGIQRIHLLKDVMILAGAGVGGGSLNYANTLYQPGEAYFNDKQWNTITDWEDELTPYYQQAQKMLGVVENPTMTPADVYSKKVAEEMGVGDTFRMAPVGVFFGEKVGLEGKPCETVKDPYFGGVGPDRTACHECGECMTGCRHGAKNTLLKNYLYLAERGGAKVHDRTTVTDITFDGTTWTVQAKQTGPITKRNPQTSSFTADNLVVAAGTWGTQNLLHRQKANGNLPKLSDKLGHLTRTNSEALLGANRSDYSPDMDFSEGVAITSSYFPAPDTHIEPVRYGKGSNAMGLLQTLMTDGDKLQPRFLEFIKQVFLQYKAIPRLVNLNKWSQRTVINLVMQTRDNSLRTFLRKIGPFNMLSSEQGTGEPNPTWIPEGNTATRILAKLLPKGVAGGVWSEVFNIPLTAHFLGGCVIGSSPEHGVVDPYHRAWGYPSLFITDGSAITANPGVNPSLSITANAERAAAMWPNKGEADPRPPQSEGYRRINPVQPNNPIVPDDAPAALRLPLRVL
>NC_007164.1|WP_158306307.1|754596_755940_+|IS30-family-transposase
MSPDERAQAVERVLAGESCQTVADAIGVHPSTVYGWIRKQRYAKLRRQRHRRTPDEAVVSLPDTGKKLGKDSVMPAPMKTQAVDGFPSGVFDKHALVGRGRRLTVEDRVAIEAGCRVGDSARAIAQKINRHHSVVAREITRNGWKIVDEDGTEQLRYNAHNAAVSTAGRMVRPKLRKLDESPTRRGVVVDCLARRWSPGRISAWLEHAFSDDESMRISHEAIYSALYIQGKGSLRAELEEVMKTKDVLIRGGSTRKRRARNAGVLTGRPWIKGAEITHRSPEADDRAIPGHWEGDLVIGKGGKSALITLVERTSRYTLLGHLPDEHSSHTVVATLQDMVKDLNTEQLKTITWDQGAEMAVTAQVQIKDGCQVFFCEPHSPWQRPTNENTNGEIRRRFYKKGTDFATVTPEHVAWVQNELNETPRQILGGATPREILNELFKRGASTA
>NC_007164.1|WP_005296245.1|769434_769713_+|metal-sensitive-transcriptional-regulator
MHGYLSDKERYLARLKRIEGQVRGLQRMVDEEQYCIDILTQVTALQSALKGVALGLLDDHMNHCVRHAAEAGGEEAEEKLAEVSQAVKRLVR
>NC_007164.1|WP_158306311.1|769756_770359_-|Ltp-family-lipoprotein
MSQQPGNSRRSKGEIATFLVLGAIGALVILGIIGAVFGEEDSNDNASSSSSVVTVTETAPTEVSDSPDPTAPEEGADNSEELAEVQNPAPAAEDPADESDNADGNVTREQRNALRSAKNYLDFMSFSDEGLRKQLDFEGFPPDAIDYAMQNIEVDWNEQAVKKAREYDETGLAMSDSGLYDQLIFEGFTPEQAQYGVDNM
>NC_007164.1|WP_011273272.1|770601_771264_-|Ltp-family-lipoprotein
MPSSDSAPQKDTQKESLQDPINGRLALIFIGAIVLVGILVAAIWHVANSKEHSHSINTQPAAASAHQRPASTSTTAPATEPANAPVKASNAPQSELNQYPTSESEATGSTAMESTESTAIAQPTDAPRTQRQANDAAMTALKFNLSEKGLRENLQLQGYSDDQITTAIEKLDPDWNQQALNCARKLNETGSPLPKDQLLKMLKTNAGFTEEQAQYAIDHL
>NC_007164.1|WP_011273273.1|771417_771972_-|hypothetical-protein
MNHDDHEPQQTPGVPDGSGQHPRSTGRRDVPPHAKPDATSSAEDFPQRSIGTGISSEQLRNDPVLLAQVTAYLEENHLHVPLLMPDIDKMSELRSETPELYSAYVEAIRSQTRADELTRTAPYIEPAKAAKRGQIFGLTAVIAVLVLCGYLAFLGYVISASIIAGFDLVALASVFANGRRIEDS
>NC_007164.1|WP_005296236.1|772639_772831_+|hypothetical-protein
MMSNDAVTPTNVALKAAGKVRRAMVHIHEGGHFDPYVEPLFSEIIEEQLAFLRKEVSVGGALA
>NC_007164.1|WP_035011232.1|772918_773209_+|hypothetical-protein
MRADPSMDVFEEFLSRYGEQFVTAGIDHAFTPALGGEFEYALENAVYYSVEGGVFIAPDMLDKILDLFSPGSNPGECLRSFLKEHRPDYVRVSEDQ
>NC_007164.1|WP_077536150.1|777149_777473_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLVVSACPAGLRGDLTRWLLEISPGVFVGRPSARVRDQVWERTCDLVNDGRAIMVFQAANEQGFDFKTHRHNWVPTDFDGVNLITRPNNRAASTRRRGWSNARRR
>NC_007164.1|WP_011273274.1|777469_778411_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAPHPSKSPMDRPILPRVQDRISFLYAERCVVNRDNNAVTFADERGITHVPAASIAALLLGPGTKVTYAAMALLGDSGVSVVWVGEKGVRYYASGRSLSNSSAAAEAQASIVSNQRRRLFCARQMYAMRFPGEDISRATMAQLRGREGSRMKKVYLAEAERTGVPWKKRMYDPQNFSSGDPINRTLTAANAALYGVAHAVIASLGFIPSLGVIHQGTERAFVYDIADLYKAEISIPAAFDAVAENELTADVNIRRVIRDYVVKKNLIPTMIRDLMFLMEMSSEAQNIDAELVLWSDLEVVASKRNWSDDGPIR
>NC_007164.1|WP_011273275.1|778421_779096_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTFTRLHLNPSSRQARKLLGNPQAMHAAVLSCFPKEVSEKERILWRHDGKVRGADEHFVYIVGPDSCDPTKIAEQTGSESDPQKASYNRLLEALADGQQWHYEVVLNPVAAKKAPGSPRGTRGKLTALVGEAAQLEWFNTKAKSCGFTPLETLIVERKTLRFSKLAKNPKGRQVVIGTVRYRGTLQIDDVETFKKSLVEGIGRGKAYGCGLLTLAKPTPSKTS
>NC_007164.1|WP_005296216.1|779092_779800_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPSTLLLRLSGPMQSWGVSSRFKQRATEQVPTKSGVLGLLAAAQGRRRTDDLQDLAALTFAVRVDQPGSLLRDYQTAQPWQKRPKDNANLVTRYYLEDAVFVAAVESDNDSFIDELASAVQRPRFPLFLGRRSCPAPPNLYLGTFRGSAVDALRATDWQATRAHRKTRAPKLSLPIFRDATQGETGIARRDVPISFSQEHREYGWRDVVQDKTGVPVENDLGSTNDPFMEAVMQA

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Click the colored protein region to show detailed information

Crispr_ID: NC_007164_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007164_3

773366-777054

TypeI-E

I-E

Consensus_repeat	Method
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CRISPRCasFinder
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CRT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	PILER-CR
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	PILER-CR
GGCTCATCCCCGCTGGCGCGGGGAGCAC	PILER-CR

60 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NC_007164_3

>merge|NC_007164|3|773366-777054|CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR
AGGCTAATCCCCGCTGGCGCGGGGAGCACCAGGAACAAGCCTTCTTCCACTGGGACCTGGACGGCTCATCCCCGCTGGCGCGGGGAGCACTGTGTGAACCTACATAACGGCAACCGGATCGACGGCTCATCCCCGCTGGCGCGGGGAGCACTCATGGCACTCTCTGACACTGAACAGCGCGAACGGCTCATCCCCGCTGGCGCGGGGAGCACCTGACACTGGCCACCCCGCCGCACTCAAACACCGGCTCATCCCCGCTGGCGCGGGGAGCACAGCATCGTTGTGCGTCTGATTCATGAACCCTCCGGCTCATCCCCGCTGGCGCGGGGAGCACCCAGAATTCCCAGAAGCCACAGCCTTCTGGTACGGCTCATCCCCGCTGGCGCGGGGAGCACATCTTGCCGATGGACTCCTTAAAGCTTTTAGCCGGCTCATCCCCGCTGGCGCGGGGAGCACTTCTATCTCGTCTCCGAACCCGTTCGTCGTCACGGCTCATCCCCGCTGGCGCGGGGAGCACATCTTGCCGATGGACTCCTTAAAGCTTTTAGCCGGCTCATCCCCGCTGGCGCGGGGAGCACGCCTTAGTGACAGATGTCAAGCTAGTGAACCACGGCTCATCCCCGCTGGCGCGGGGAGCACATCACCCAGAGCGTGCCGGGCGACCGCCGATGAGGCTCATCCCCGCTGGCGCGGGGAGCACCGCACCCGTTTTTGATTGGATTGGTGAAAAGGCGGCTCATCCCCGCTGGCGCGGGGAGCACTCACCATCAACGGCGGTAACGGCTCGAAGATTCGGCTCATCCCCGCTGGCGCGGGGAGCACGCTGTACTTCGCGCGCTCTCGGGCTAAACGGGCGGCTCATCCCCGCTGGCGCGGGGAGCACGAACACATCGCCAAGGGTGGCCGCGACGCCGCGGGCTCATCCCCGCTGGCGCGGGGAGCACACCCCACCCCCGCCGTTTTGGTTCTCCCTCGGCGGCTCATCCCCGCTGGCGCGGGGAGCACGCAGCCATAACAGTCTGCGCAGCAGCGGCAAGCGGCTCATCCCCGCTGGCGCGGGGAGCACGGATGCAGCCCACGTTGATATTGATACGGGCACGGCTCATCCCCGCTGGCGCGGGGAGCACTCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGGCGGCTCATCCCCGCTGGCGCGGGGAGCACGTCTCAATCGCCTTAGTGTTAGCATCGGAAATCGGCTCATCCCCGCTGGCGCGGGGAGCACGGCGTGCCGGGCGACCGCCGATGATTCATCCGCGGCTCATCCCCGCTGGCGCGGGGAGCACGTCGACGGATCCCGCCGATACGCAGAGTGGAACGGCTCATCCCCGCTGGCGCGGGGAGCACTCGCACTAGGTGTGCTGGTCACTATCGGAGGAAGGCTCATCCCCGCTGGCGCGGGGAGCACTCAAGCAGAATCTTCTGCATTGCTAAGCTCCTCGGCTCATCCCCGCTGGCGCGGGGAGCACCGCCGCCGCAATTCCCCCGGTGGTGTTGAGTCGGGCTCATCCCCGCTGGCGCGGGGAGCACAGGTTCAACGCGGTCTGCGCCGCAGTCTGCGCCGGCTCATCCCCGCTGGCGCGGGGAGCACCTACCCATAGCCTGGAAAGCTTCACCGATCAGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGTCAGACAGCAACGCGGGAATCTTATCGCCCGGCTCATCCCCGCTGGCGCGGGGAGCACTTTAATCTCGCCATCGTGGCCGCGAGCTATTACGGCTCATCCCCGCTGGCGCGGGGAGCACTCTTCCTTGACGTTCTCGTTGCCTGCGATCAGCGGCTCATCCCCGCTGGCGCGGGGAGCACGCGCGCAGCATAGCGCAGCGGGCGGGTCCAGGCGGCTCATCCCCGCTGGCGCGGGGAGCACAGCGCAGCCGTAGACATGGCATCCCAGATCGGCGGCTCATCCCCGCTGGCGCGGGGAGCACCCAGGCAGAATCTCGCACACCACCGGCGCATCCGGCTCATCCCCGCTGGCGCGGGGAGCACTGACAGACCTGACTAGCCCCACCGTGGGAGAGCGGCTCATCCCCGCTGGCGCGGGGAGCACTCGTTCGCAGCATGCCAGGCGGTATCCCAATCAGGCTCATCCCCGCTGGCGCGGGGAGCACTTATAGGTTGCCGGGTTCTGCCAGTCAGTAGCCGGCTCATCCCCGCTGGCGCGGGGAGCACGGAGTTCGCGTCTGATGCTATGGCTGGCCTGTCGGCTCATCCCCGCTGGCGCGGGGAGCACAGGACAGTATCAGCCAGGTCTGGCGAATGTCCCGGCTCATCCCCGCTGGCGCGGGGAGCACACACCATACCCGAGGCCGCCGAAATACTACGGAGGCTCATCCCCGCTGGCGCGGGGAGCACCGTAGCCGATCACCGGGTGTACCTTTGGGCGACGGCTCATCCCCGCTGGCGCGGGGAGCACATCCCAAATCCACTTAACGAAATTACCGAAAGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGGCGTACCTTTGGGCGACTTGGAAAGACGACGGCTCATCCCCGCTGGCGCGGGGAGCACTCAGACAGGTCTTTCTGCTGATCTTCATACTTCGGCTCATCCCCGCTGGCGCGGGGAGCACACCATGTTCGGCACTCTGAAGGTTGTGCGTGACGGCTCATCCCCGCTGGCGCGGGGAGCACCGCGTTGCTTTACCCAACGTCTCCGCCAGGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACAGAACAGCCTCTGCGACCTCGGGCGGCATTGCCGGCTCATCCCCGCTGGCGCGGGGAGCACAGACCCTTGATTGTCTCCTCGAGCGGGGTGACCGGCTCATCCCCGCTGGCGCGGGGAGCACTAGGACATCAGCCCCGTCAGCTTCACAACGGACGGCTCATCCCCGCTGGCGCGGGGAGCACCTCTGCCTCTACAGGCTCCGCCTCTACAGTTTCGGCTCATCCCCGCTGGCGCGGGGAGCACGGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGGAGGCTCATCCCCGCTGGCGCGGGGAGCACGGCACACCCCCTTTAACCTGCAAAAACAAGGTTGGCTCATCCCCGCTGGCGCGGGGAGCACTAGTGCAGCCTGCAGCCCGGACGGGATCGGCACGGCTCATCCCCGCTGGCGCGGGGAGCACTGCAGAATCCGCGGGCGATCTTGAGCGAGACGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGAGTGGATTGGTCAGTCTGTTCTCAGGTCTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCACCCACAGAGGAAGAATGGCACAACCTACAACGGCTCATCCCCGCTGGCGCGGGGAGCACACAACAAAGACGCACAACAAAACCTCGTCGGCAGGCTCATCCCCGCTGGCGCGGGGAGCACACCTGCGGACTCCTCCAGCCCGAAACCGAATTGGGCTCATCCCCGCTGGCGCGGGGAGCACGTGACTGGATTGTGGTCGGGGCTCGTCGGCTTCGGCTCATCCCCGCTGGCGCGGGGAGCACTGCTTCACAACCGCGCGAGACTCCACCAGGGCCGGCTCATCCCCGCTGGCGCGGGGAGCAC

>NC_007164|3|3|773366-777054|CRISPRCasFinder
AGGCTAATCCCCGCTGGCGCGGGGAGCAC	CAGGAACAAGCCTTCTTCCACTGGGACCTGGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGTGAACCTACATAACGGCAACCGGATCGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATGGCACTCTCTGACACTGAACAGCGCGAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGACACTGGCCACCCCGCCGCACTCAAACAC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCATCGTTGTGCGTCTGATTCATGAACCCTC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGAATTCCCAGAAGCCACAGCCTTCTGGTA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTATCTCGTCTCCGAACCCGTTCGTCGTCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCCTTAGTGACAGATGTCAAGCTAGTGAACCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCACCCAGAGCGTGCCGGGCGACCGCCGATG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCACCCGTTTTTGATTGGATTGGTGAAAAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCATCAACGGCGGTAACGGCTCGAAGATT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCTGTACTTCGCGCGCTCTCGGGCTAAACGGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GAACACATCGCCAAGGGTGGCCGCGACGCCGC
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCCCACCCCCGCCGTTTTGGTTCTCCCTCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCAGCCATAACAGTCTGCGCAGCAGCGGCAAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGATGCAGCCCACGTTGATATTGATACGGGCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCTCAATCGCCTTAGTGTTAGCATCGGAAAT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCGTGCCGGGCGACCGCCGATGATTCATCCG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGACGGATCCCGCCGATACGCAGAGTGGAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGCACTAGGTGTGCTGGTCACTATCGGAGGA
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAAGCAGAATCTTCTGCATTGCTAAGCTCCT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCCGCCGCAATTCCCCCGGTGGTGTTGAGTC
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGTTCAACGCGGTCTGCGCCGCAGTCTGCGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTACCCATAGCCTGGAAAGCTTCACCGATCAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCAGACAGCAACGCGGGAATCTTATCGCC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTTAATCTCGCCATCGTGGCCGCGAGCTATTA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTTCCTTGACGTTCTCGTTGCCTGCGATCAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGCGCAGCATAGCGCAGCGGGCGGGTCCAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCGCAGCCGTAGACATGGCATCCCAGATCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGGCAGAATCTCGCACACCACCGGCGCATC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGACAGACCTGACTAGCCCCACCGTGGGAGAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTCGCAGCATGCCAGGCGGTATCCCAATC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTATAGGTTGCCGGGTTCTGCCAGTCAGTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAGTTCGCGTCTGATGCTATGGCTGGCCTGT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGACAGTATCAGCCAGGTCTGGCGAATGTCC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACACCATACCCGAGGCCGCCGAAATACTACGG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGTAGCCGATCACCGGGTGTACCTTTGGGCGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCCCAAATCCACTTAACGAAATTACCGAAAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGGCGTACCTTTGGGCGACTTGGAAAGACGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAGACAGGTCTTTCTGCTGATCTTCATACTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCATGTTCGGCACTCTGAAGGTTGTGCGTGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCGTTGCTTTACCCAACGTCTCCGCCAGGTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAACAGCCTCTGCGACCTCGGGCGGCATTGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCCTTGATTGTCTCCTCGAGCGGGGTGAC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGGACATCAGCCCCGTCAGCTTCACAACGGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCTGCCTCTACAGGCTCCGCCTCTACAGTTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCACACCCCCTTTAACCTGCAAAAACAAGGT
TGGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGTGCAGCCTGCAGCCCGGACGGGATCGGCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCAGAATCCGCGGGCGATCTTGAGCGAGACG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGAGTGGATTGGTCAGTCTGTTCTCAGGTCTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CACCCACAGAGGAAGAATGGCACAACCTACAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAACAAAGACGCACAACAAAACCTCGTCGGC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCTGCGGACTCCTCCAGCCCGAAACCGAATT
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGACTGGATTGTGGTCGGGGCTCGTCGGCTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTTCACAACCGCGCGAGACTCCACCAGGGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC

>NC_007164|3|1|773366-777054|CRT
AGGCTAATCCCCGCTGGCGCGGGGAGCAC	CAGGAACAAGCCTTCTTCCACTGGGACCTGGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGTGAACCTACATAACGGCAACCGGATCGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATGGCACTCTCTGACACTGAACAGCGCGAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGACACTGGCCACCCCGCCGCACTCAAACAC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCATCGTTGTGCGTCTGATTCATGAACCCTC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGAATTCCCAGAAGCCACAGCCTTCTGGTA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTATCTCGTCTCCGAACCCGTTCGTCGTCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCCTTAGTGACAGATGTCAAGCTAGTGAACCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCACCCAGAGCGTGCCGGGCGACCGCCGATG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCACCCGTTTTTGATTGGATTGGTGAAAAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCATCAACGGCGGTAACGGCTCGAAGATT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCTGTACTTCGCGCGCTCTCGGGCTAAACGGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GAACACATCGCCAAGGGTGGCCGCGACGCCGC
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCCCACCCCCGCCGTTTTGGTTCTCCCTCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCAGCCATAACAGTCTGCGCAGCAGCGGCAAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGATGCAGCCCACGTTGATATTGATACGGGCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCTCAATCGCCTTAGTGTTAGCATCGGAAAT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCGTGCCGGGCGACCGCCGATGATTCATCCG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGACGGATCCCGCCGATACGCAGAGTGGAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGCACTAGGTGTGCTGGTCACTATCGGAGGA
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAAGCAGAATCTTCTGCATTGCTAAGCTCCT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCCGCCGCAATTCCCCCGGTGGTGTTGAGTC
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGTTCAACGCGGTCTGCGCCGCAGTCTGCGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTACCCATAGCCTGGAAAGCTTCACCGATCAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCAGACAGCAACGCGGGAATCTTATCGCC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTTAATCTCGCCATCGTGGCCGCGAGCTATTA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCTTCCTTGACGTTCTCGTTGCCTGCGATCAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGCGCAGCATAGCGCAGCGGGCGGGTCCAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCGCAGCCGTAGACATGGCATCCCAGATCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGGCAGAATCTCGCACACCACCGGCGCATC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGACAGACCTGACTAGCCCCACCGTGGGAGAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTCGCAGCATGCCAGGCGGTATCCCAATC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTATAGGTTGCCGGGTTCTGCCAGTCAGTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAGTTCGCGTCTGATGCTATGGCTGGCCTGT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGACAGTATCAGCCAGGTCTGGCGAATGTCC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACACCATACCCGAGGCCGCCGAAATACTACGG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGTAGCCGATCACCGGGTGTACCTTTGGGCGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCCCAAATCCACTTAACGAAATTACCGAAAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGGCGTACCTTTGGGCGACTTGGAAAGACGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAGACAGGTCTTTCTGCTGATCTTCATACTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCATGTTCGGCACTCTGAAGGTTGTGCGTGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCGTTGCTTTACCCAACGTCTCCGCCAGGTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAACAGCCTCTGCGACCTCGGGCGGCATTGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCCTTGATTGTCTCCTCGAGCGGGGTGAC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGGACATCAGCCCCGTCAGCTTCACAACGGA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCTGCCTCTACAGGCTCCGCCTCTACAGTTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGG
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCACACCCCCTTTAACCTGCAAAAACAAGGT
TGGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGTGCAGCCTGCAGCCCGGACGGGATCGGCA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCAGAATCCGCGGGCGATCTTGAGCGAGACG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CGAGTGGATTGGTCAGTCTGTTCTCAGGTCTG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CACCCACAGAGGAAGAATGGCACAACCTACAA
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAACAAAGACGCACAACAAAACCTCGTCGGC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCTGCGGACTCCTCCAGCCCGAAACCGAATT
GGGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGACTGGATTGTGGTCGGGGCTCGTCGGCTT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTTCACAACCGCGCGAGACTCCACCAGGGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC

>NC_007164|3|1|773367-775102|PILER-CR
GGCTAATCCCCGCTGGCGCGGGGAGCAC	CAGGAACAAGCCTTCTTCCACTGGGACCTGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGTGAACCTACATAACGGCAACCGGATCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATGGCACTCTCTGACACTGAACAGCGCGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGACACTGGCCACCCCGCCGCACTCAAACACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCATCGTTGTGCGTCTGATTCATGAACCCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGAATTCCCAGAAGCCACAGCCTTCTGGTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTATCTCGTCTCCGAACCCGTTCGTCGTCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCCTTAGTGACAGATGTCAAGCTAGTGAACCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCACCCAGAGCGTGCCGGGCGACCGCCGATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCACCCGTTTTTGATTGGATTGGTGAAAAGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCATCAACGGCGGTAACGGCTCGAAGATTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCTGTACTTCGCGCGCTCTCGGGCTAAACGGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAACACATCGCCAAGGGTGGCCGCGACGCCGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCCCACCCCCGCCGTTTTGGTTCTCCCTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCAGCCATAACAGTCTGCGCAGCAGCGGCAAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGATGCAGCCCACGTTGATATTGATACGGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCTCAATCGCCTTAGTGTTAGCATCGGAAATC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCGTGCCGGGCGACCGCCGATGATTCATCCGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGACGGATCCCGCCGATACGCAGAGTGGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGCACTAGGTGTGCTGGTCACTATCGGAGGAA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAAGCAGAATCTTCTGCATTGCTAAGCTCCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCCGCCGCAATTCCCCCGGTGGTGTTGAGTCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGTTCAACGCGGTCTGCGCCGCAGTCTGCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTACCCATAGCCTGGAAAGCTTCACCGATCAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCAGACAGCAACGCGGGAATCTTATCGCCC
GGCTCATCCCCGCTGGCGCGGGGAGCACTTTAATCTCGCCATCGTGGCCGCGAGCTATTACGGCTCATCCCCGCTGGCGCGGGGAGCACTCTTCCTTGACGTTCTCGTTGCCTGCGATCAGCGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGCGCAGCATAGCGCAGCGGGCGGGTCCAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCGCAGCCGTAGACATGGCATCCCAGATCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGGCAGAATCTCGCACACCACCGGCGCATC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGACAGACCTGACTAGCCCCACCGTGGGAGAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTCGCAGCATGCCAGGCGGTATCCCAATC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTATAGGTTGCCGGGTTCTGCCAGTCAGTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAGTTCGCGTCTGATGCTATGGCTGGCCTGT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGACAGTATCAGCCAGGTCTGGCGAATGTCC
CGGCTCATCCCCGCTGGCGCGGGGAGCACACACCATACCCGAGGCCGCCGAAATACTACGGAGGCTCATCCCCGCTGGCGCGGGGAGCACCGTAGCCGATCACCGGGTGTACCTTTGGGCGACGGCTCATCCCCGCTGGCGCGGGGAGCACATCCCAAATCCACTTAACGAAATTACCGAAAGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGGCGTACCTTTGGGCGACTTGGAAAGACGACGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAGACAGGTCTTTCTGCTGATCTTCATACTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCATGTTCGGCACTCTGAAGGTTGTGCGTGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCGTTGCTTTACCCAACGTCTCCGCCAGGTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAACAGCCTCTGCGACCTCGGGCGGCATTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCCTTGATTGTCTCCTCGAGCGGGGTGACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGGACATCAGCCCCGTCAGCTTCACAACGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCTGCCTCTACAGGCTCCGCCTCTACAGTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCACACCCCCTTTAACCTGCAAAAACAAGGTT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGTGCAGCCTGCAGCCCGGACGGGATCGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCAGAATCCGCGGGCGATCTTGAGCGAGACGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGAGTGGATTGGTCAGTCTGTTCTCAGGTCTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CACCCACAGAGGAAGAATGGCACAACCTACAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAACAAAGACGCACAACAAAACCTCGTCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCTGCGGACTCCTCCAGCCCGAAACCGAATTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGACTGGATTGTGGTCGGGGCTCGTCGGCTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTTCACAACCGCGCGAGACTCCACCAGGGCC


>NC_007164|3|2|775196-775712|PILER-CR
	CAGGAACAAGCCTTCTTCCACTGGGACCTGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGTGAACCTACATAACGGCAACCGGATCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATGGCACTCTCTGACACTGAACAGCGCGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGACACTGGCCACCCCGCCGCACTCAAACACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCATCGTTGTGCGTCTGATTCATGAACCCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGAATTCCCAGAAGCCACAGCCTTCTGGTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTATCTCGTCTCCGAACCCGTTCGTCGTCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCCTTAGTGACAGATGTCAAGCTAGTGAACCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCACCCAGAGCGTGCCGGGCGACCGCCGATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCACCCGTTTTTGATTGGATTGGTGAAAAGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCATCAACGGCGGTAACGGCTCGAAGATTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCTGTACTTCGCGCGCTCTCGGGCTAAACGGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAACACATCGCCAAGGGTGGCCGCGACGCCGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCCCACCCCCGCCGTTTTGGTTCTCCCTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCAGCCATAACAGTCTGCGCAGCAGCGGCAAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGATGCAGCCCACGTTGATATTGATACGGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCTCAATCGCCTTAGTGTTAGCATCGGAAATC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCGTGCCGGGCGACCGCCGATGATTCATCCGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGACGGATCCCGCCGATACGCAGAGTGGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGCACTAGGTGTGCTGGTCACTATCGGAGGAA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAAGCAGAATCTTCTGCATTGCTAAGCTCCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCCGCCGCAATTCCCCCGGTGGTGTTGAGTCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGTTCAACGCGGTCTGCGCCGCAGTCTGCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTACCCATAGCCTGGAAAGCTTCACCGATCAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCAGACAGCAACGCGGGAATCTTATCGCCC
GGCTCATCCCCGCTGGCGCGGGGAGCACTTTAATCTCGCCATCGTGGCCGCGAGCTATTACGGCTCATCCCCGCTGGCGCGGGGAGCACTCTTCCTTGACGTTCTCGTTGCCTGCGATCAGCGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGCGCAGCATAGCGCAGCGGGCGGGTCCAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCGCAGCCGTAGACATGGCATCCCAGATCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGGCAGAATCTCGCACACCACCGGCGCATC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGACAGACCTGACTAGCCCCACCGTGGGAGAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTCGCAGCATGCCAGGCGGTATCCCAATC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTATAGGTTGCCGGGTTCTGCCAGTCAGTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAGTTCGCGTCTGATGCTATGGCTGGCCTGT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGACAGTATCAGCCAGGTCTGGCGAATGTCC
CGGCTCATCCCCGCTGGCGCGGGGAGCACACACCATACCCGAGGCCGCCGAAATACTACGGAGGCTCATCCCCGCTGGCGCGGGGAGCACCGTAGCCGATCACCGGGTGTACCTTTGGGCGACGGCTCATCCCCGCTGGCGCGGGGAGCACATCCCAAATCCACTTAACGAAATTACCGAAAGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGGCGTACCTTTGGGCGACTTGGAAAGACGACGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAGACAGGTCTTTCTGCTGATCTTCATACTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCATGTTCGGCACTCTGAAGGTTGTGCGTGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCGTTGCTTTACCCAACGTCTCCGCCAGGTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAACAGCCTCTGCGACCTCGGGCGGCATTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCCTTGATTGTCTCCTCGAGCGGGGTGACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGGACATCAGCCCCGTCAGCTTCACAACGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCTGCCTCTACAGGCTCCGCCTCTACAGTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCACACCCCCTTTAACCTGCAAAAACAAGGTT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGTGCAGCCTGCAGCCCGGACGGGATCGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCAGAATCCGCGGGCGATCTTGAGCGAGACGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGAGTGGATTGGTCAGTCTGTTCTCAGGTCTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CACCCACAGAGGAAGAATGGCACAACCTACAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAACAAAGACGCACAACAAAACCTCGTCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCTGCGGACTCCTCCAGCCCGAAACCGAATTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGACTGGATTGTGGTCGGGGCTCGTCGGCTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTTCACAACCGCGCGAGACTCCACCAGGGCC


>NC_007164|3|3|775990-777054|PILER-CR
	CAGGAACAAGCCTTCTTCCACTGGGACCTGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGTGTGAACCTACATAACGGCAACCGGATCGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCATGGCACTCTCTGACACTGAACAGCGCGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTGACACTGGCCACCCCGCCGCACTCAAACACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCATCGTTGTGCGTCTGATTCATGAACCCTCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGAATTCCCAGAAGCCACAGCCTTCTGGTAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TTCTATCTCGTCTCCGAACCCGTTCGTCGTCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCTTGCCGATGGACTCCTTAAAGCTTTTAGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCCTTAGTGACAGATGTCAAGCTAGTGAACCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ATCACCCAGAGCGTGCCGGGCGACCGCCGATGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCACCCGTTTTTGATTGGATTGGTGAAAAGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCACCATCAACGGCGGTAACGGCTCGAAGATTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCTGTACTTCGCGCGCTCTCGGGCTAAACGGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GAACACATCGCCAAGGGTGGCCGCGACGCCGCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCCCACCCCCGCCGTTTTGGTTCTCCCTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GCAGCCATAACAGTCTGCGCAGCAGCGGCAAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGATGCAGCCCACGTTGATATTGATACGGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGAAGTCTGGTCCAGCGTTGCAGCAGTTCGGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCTCAATCGCCTTAGTGTTAGCATCGGAAATC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCGTGCCGGGCGACCGCCGATGATTCATCCGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTCGACGGATCCCGCCGATACGCAGAGTGGAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGCACTAGGTGTGCTGGTCACTATCGGAGGAA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAAGCAGAATCTTCTGCATTGCTAAGCTCCTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCCGCCGCAATTCCCCCGGTGGTGTTGAGTCG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGTTCAACGCGGTCTGCGCCGCAGTCTGCGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTACCCATAGCCTGGAAAGCTTCACCGATCAGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGGTCAGACAGCAACGCGGGAATCTTATCGCCC
GGCTCATCCCCGCTGGCGCGGGGAGCACTTTAATCTCGCCATCGTGGCCGCGAGCTATTACGGCTCATCCCCGCTGGCGCGGGGAGCACTCTTCCTTGACGTTCTCGTTGCCTGCGATCAGCGGCTCATCCCCGCTGGCGCGGGGAGCAC	GCGCGCAGCATAGCGCAGCGGGCGGGTCCAGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGCGCAGCCGTAGACATGGCATCCCAGATCGG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	CCAGGCAGAATCTCGCACACCACCGGCGCATC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TGACAGACCTGACTAGCCCCACCGTGGGAGAG
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCGTTCGCAGCATGCCAGGCGGTATCCCAATC
AGGCTCATCCCCGCTGGCGCGGGGAGCAC	TTATAGGTTGCCGGGTTCTGCCAGTCAGTAGC
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	GGAGTTCGCGTCTGATGCTATGGCTGGCCTGT
CGGCTCATCCCCGCTGGCGCGGGGAGCAC	AGGACAGTATCAGCCAGGTCTGGCGAATGTCC
CGGCTCATCCCCGCTGGCGCGGGGAGCACACACCATACCCGAGGCCGCCGAAATACTACGGAGGCTCATCCCCGCTGGCGCGGGGAGCACCGTAGCCGATCACCGGGTGTACCTTTGGGCGACGGCTCATCCCCGCTGGCGCGGGGAGCACATCCCAAATCCACTTAACGAAATTACCGAAAGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGTCTGGAGGAGTCCGCAGGCCTGCTGGGTGCGGCTCATCCCCGCTGGCGCGGGGAGCACCGGGCGTACCTTTGGGCGACTTGGAAAGACGACGGCTCATCCCCGCTGGCGCGGGGAGCAC	TCAGACAGGTCTTTCTGCTGATCTTCATACTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCATGTTCGGCACTCTGAAGGTTGTGCGTGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGCGTTGCTTTACCCAACGTCTCCGCCAGGTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGAACAGCCTCTGCGACCTCGGGCGGCATTGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	AGACCCTTGATTGTCTCCTCGAGCGGGGTGACC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGGACATCAGCCCCGTCAGCTTCACAACGGAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CTCTGCCTCTACAGGCTCCGCCTCTACAGTTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGGCGGTTTTGGCCGGTGGGTGCCGGGCGTGGA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GGCACACCCCCTTTAACCTGCAAAAACAAGGTT
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TAGTGCAGCCTGCAGCCCGGACGGGATCGGCAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCAGAATCCGCGGGCGATCTTGAGCGAGACGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CGAGTGGATTGGTCAGTCTGTTCTCAGGTCTGC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	CACCCACAGAGGAAGAATGGCACAACCTACAAC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACAACAAAGACGCACAACAAAACCTCGTCGGCA
GGCTCATCCCCGCTGGCGCGGGGAGCAC	ACCTGCGGACTCCTCCAGCCCGAAACCGAATTG
GGCTCATCCCCGCTGGCGCGGGGAGCAC	GTGACTGGATTGTGGTCGGGGCTCGTCGGCTTC
GGCTCATCCCCGCTGGCGCGGGGAGCAC	TGCTTCACAACCGCGCGAGACTCCACCAGGGCC
GGCTCATCCCCGCTGGCGCGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007164.1\|WP_077536150.1\|777149_777473_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NC_007164.1\|WP_011273272.1\|770601_771264_-\|Ltp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377866
NC_007164.1\|WP_005296236.1\|772639_772831_+\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_005296216.1\|779092_779800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187776
NC_007164.1\|WP_011273282.1\|788858_789587_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NC_007164.1\|WP_005296213.1\|779799_780930_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NC_007164.1\|WP_011273275.1\|778421_779096_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
NC_007164.1\|WP_005296210.1\|780958_781594_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|378191
NC_007164.1\|WP_005296194.1\|789606_790503_+\|glutamate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270408
NC_007164.1\|WP_005296256.1\|765032_765347_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_011273274.1\|777469_778411_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NC_007164.1\|WP_158306311.1\|769756_770359_-\|Ltp-family-lipoprotein	unknown	unknown	gnl\|CDD\|377866
NC_007164.1\|WP_011273270.1\|767314_769435_+\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NC_007164.1\|WP_005296245.1\|769434_769713_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376835
NC_007164.1\|WP_011273277.1\|783399_786252_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NC_007164.1\|WP_011273268.1\|765504_766605_+\|S-(hydroxymethyl)mycothiol-dehydrogenase	unknown	unknown	gnl\|CDD\|132492
NC_007164.1\|WP_011273273.1\|771417_771972_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_035011232.1\|772918_773209_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371092
NC_007164.1\|WP_111712227.1\|781638_783333_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
NC_007164.1\|WP_011273269.1\|766647_767289_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792

Protein	Function_ID	Function_description	E-value
NC_007164.1\|WP_077536150.1\|777149_777473_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.94947e-42
NC_007164.1\|WP_011273272.1\|770601_771264_-\|Ltp-family-lipoprotein	gnl\|CDD\|377866	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	9.8073e-12
NC_007164.1\|WP_005296216.1\|779092_779800_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.31685e-52
NC_007164.1\|WP_011273282.1\|788858_789587_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.44101e-156
NC_007164.1\|WP_005296213.1\|779799_780930_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	6.75386e-163
NC_007164.1\|WP_011273275.1\|778421_779096_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	9.02998e-70
NC_007164.1\|WP_005296210.1\|780958_781594_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	9.62107e-32
NC_007164.1\|WP_005296194.1\|789606_790503_+\|glutamate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270408	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold. This group includes periplasmic glutamate-binding domain GluB from Corynebacterium efficiens and its related proteins. The GluB domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.44437e-72
NC_007164.1\|WP_011273274.1\|777469_778411_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.55116e-141
NC_007164.1\|WP_158306311.1\|769756_770359_-\|Ltp-family-lipoprotein	gnl\|CDD\|377866	pfam07553, Lipoprotein_Ltp, Host cell surface-exposed lipoprotein. This is a family of lipoproteins that is involved in superinfection exclusion. Proteins in this family have been shown to act at the stage of DNA release from the phage head into the cell.	6.89518e-17
NC_007164.1\|WP_011273270.1\|767314_769435_+\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NC_007164.1\|WP_005296245.1\|769434_769713_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|376835	pfam02583, Trns_repr_metal, Metal-sensitive transcriptional repressor. This is a family of metal-sensitive repressors, involved in resistance to metal ions. Members of this family bind copper, nickel or cobalt ions via conserved cysteine and histidine residues. In the absence of metal ions, these proteins bind to promoter regions and repress transcription. When bound to metal ions they are unable to bind DNA, leading to transcriptional derepression.	5.09269e-32
NC_007164.1\|WP_011273277.1\|783399_786252_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.31644e-83
NC_007164.1\|WP_011273268.1\|765504_766605_+\|S-(hydroxymethyl)mycothiol-dehydrogenase	gnl\|CDD\|132492	TIGR03451, S-hydroxymethylmycothiol_dehydrogenase, S-(hydroxymethyl)mycothiol dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. [Cellular processes, Detoxification].	0
NC_007164.1\|WP_035011232.1\|772918_773209_+\|hypothetical-protein	gnl\|CDD\|371092	pfam10496, Syntaxin-18_N, SNARE-complex protein Syntaxin-18 N-terminus. This is the conserved N-terminal of Syntaxin-18. Syntaxin-18 is found in the SNARE complex of the endoplasmic reticulum and functions in the trafficking between the ER intermediate compartment and the cis-Golgi vesicle. In particular, the N-terminal region is important for the formation of ER aggregates. More specifically, syntaxin-18 is involved in endoplasmic reticulum-mediated phagocytosis, presumably by regulating the specific and direct fusion of the ER with the plasma or phagosomal membranes.	0.00987693
NC_007164.1\|WP_111712227.1\|781638_783333_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	2.08524e-114
NC_007164.1\|WP_011273269.1\|766647_767289_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	3.32167e-48

>NC_007164.1|WP_035011232.1|772918_773209_+|hypothetical-protein
MRADPSMDVFEEFLSRYGEQFVTAGIDHAFTPALGGEFEYALENAVYYSVEGGVFIAPDMLDKILDLFSPGSNPGECLRSFLKEHRPDYVRVSEDQ
>NC_007164.1|WP_005296236.1|772639_772831_+|hypothetical-protein
MMSNDAVTPTNVALKAAGKVRRAMVHIHEGGHFDPYVEPLFSEIIEEQLAFLRKEVSVGGALA
>NC_007164.1|WP_011273273.1|771417_771972_-|hypothetical-protein
MNHDDHEPQQTPGVPDGSGQHPRSTGRRDVPPHAKPDATSSAEDFPQRSIGTGISSEQLRNDPVLLAQVTAYLEENHLHVPLLMPDIDKMSELRSETPELYSAYVEAIRSQTRADELTRTAPYIEPAKAAKRGQIFGLTAVIAVLVLCGYLAFLGYVISASIIAGFDLVALASVFANGRRIEDS
>NC_007164.1|WP_011273272.1|770601_771264_-|Ltp-family-lipoprotein
MPSSDSAPQKDTQKESLQDPINGRLALIFIGAIVLVGILVAAIWHVANSKEHSHSINTQPAAASAHQRPASTSTTAPATEPANAPVKASNAPQSELNQYPTSESEATGSTAMESTESTAIAQPTDAPRTQRQANDAAMTALKFNLSEKGLRENLQLQGYSDDQITTAIEKLDPDWNQQALNCARKLNETGSPLPKDQLLKMLKTNAGFTEEQAQYAIDHL
>NC_007164.1|WP_158306311.1|769756_770359_-|Ltp-family-lipoprotein
MSQQPGNSRRSKGEIATFLVLGAIGALVILGIIGAVFGEEDSNDNASSSSSVVTVTETAPTEVSDSPDPTAPEEGADNSEELAEVQNPAPAAEDPADESDNADGNVTREQRNALRSAKNYLDFMSFSDEGLRKQLDFEGFPPDAIDYAMQNIEVDWNEQAVKKAREYDETGLAMSDSGLYDQLIFEGFTPEQAQYGVDNM
>NC_007164.1|WP_005296245.1|769434_769713_+|metal-sensitive-transcriptional-regulator
MHGYLSDKERYLARLKRIEGQVRGLQRMVDEEQYCIDILTQVTALQSALKGVALGLLDDHMNHCVRHAAEAGGEEAEEKLAEVSQAVKRLVR
>NC_007164.1|WP_011273270.1|767314_769435_+|cadmium-translocating-P-type-ATPase
MTVIDLDITGMTCASCANRIEKKLNKQEGVTATVNYATEKAHIETGEGAAADADSYIAIVEKLGYGGSVPKPEKPAGDDPAAKELRGLKRRLVVAIALATPVILLAMIPPLQFDYWQWVSFALATPVILWAGWPFHKATWVNLKHGAATMDTLITVGTSAAFLWSLYALFFGHAGDPGMRHGWSILNHAGDPMGDIYFEVAAGVVTFVLAGRYFEKRSKQRAGDAIRALTDMGAKQVTVLRDGGETLLPIEQLQIGDHFLARPGEKIATDGRIVDGLSAIDQSMLTGESVPVDVGPGDEVTGATINTSGRLVVEATRVGEQTKLAQMAKLIDEAQSGKADVQRLADKVSGIFVPVVIAIALVTLLFAGFSNAVAVLIIACPCALGLATPTALLVGTGRGAEQGILIRGPEVLEGAHAITTVVMDKTGTVTTGTMRVVDVAPTGAAREEVLRAAAAVEAYSEHPIGRAIAEAGREEFGSLPEVSGFRNLPGHGVEGTVDGQVIRVGRGDEGASTNKATTVSVSADGRAIGTISVADTVRSTSAEAVRKMHEMGLKTVLLTGDNQQVADAVAREVGIDEVIAGVMPEDKVAHIRSLENVAMVGDGVNDAAALASADLGIAMGSGTDAAIEAADITVMRDDLLAVADALRLARKTLRTIKMNLFWAFAYNVAAIPLAAFGLLNPMLAGAAMALSSVFVVSNSLRLKGFK
>NC_007164.1|WP_011273269.1|766647_767289_+|MBL-fold-metallo-hydrolase
MSKQRLENPQIEQFETSGKFRLDGGEWDVDNNVYLLVNGDKCIVVDPAHDAQTVIDHVGDRTVEAILLTHAHNDHCELAPELAKKWGVEVYLHPDDRMLWEESNGDAPFTPIDVEDPRWADWGVRLYHTPGHSPGCIVVEVPGQHALLSGDTLFNGGPGATGRKYSSFPTIIESLQSKVFILPHDMKVYPGHGDTTTVGAEAARIEEYIERGY
>NC_007164.1|WP_011273268.1|765504_766605_+|S-(hydroxymethyl)mycothiol-dehydrogenase
MTTTVKAVISRAKNEPVELTDIVIPEPGENDVIVRIQACGVCHTDLAYRDGGIADNYPFLLGHEAAGVVEQVGDRVTHVEVGDYVVLNWRAVCGQCRACKKGEPKYCFDTHNASKKMTLTDGTELEAALGIGAFAEKTLVHEGQCTKVDSEADPAVAGLLGCGVMAGLGAAVNTGEVKRGESIAVIGVGGVGMAAIAGAAVAGATKIIAIDISDAKLARAKEEFGATHTINSSGLSDDELVEKVQEINGGFGVDVAVDAVGVPQTYKQAFYVRDLAGRVVLVGVPTPDMTLELPFLDVFSHGGALKSSWYGDCLPERDFPMYVDLYQEGRFPLDRFVDDRISIDGVEDAFEKMKQGKVLRSVVEFK
>NC_007164.1|WP_005296256.1|765032_765347_-|hypothetical-protein
MIQLVVGAAAGYLMGTKAGRRRYEQIRRGYQSAVNSDITKAVVRSGRKALANRLDPEPRMHEVRDLNRSTRDSLGEGHTIVEADDAHPNDRIESPKRAPKNPFK
>NC_007164.1|WP_077536150.1|777149_777473_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MMVLVVSACPAGLRGDLTRWLLEISPGVFVGRPSARVRDQVWERTCDLVNDGRAIMVFQAANEQGFDFKTHRHNWVPTDFDGVNLITRPNNRAASTRRRGWSNARRR
>NC_007164.1|WP_011273274.1|777469_778411_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAPHPSKSPMDRPILPRVQDRISFLYAERCVVNRDNNAVTFADERGITHVPAASIAALLLGPGTKVTYAAMALLGDSGVSVVWVGEKGVRYYASGRSLSNSSAAAEAQASIVSNQRRRLFCARQMYAMRFPGEDISRATMAQLRGREGSRMKKVYLAEAERTGVPWKKRMYDPQNFSSGDPINRTLTAANAALYGVAHAVIASLGFIPSLGVIHQGTERAFVYDIADLYKAEISIPAAFDAVAENELTADVNIRRVIRDYVVKKNLIPTMIRDLMFLMEMSSEAQNIDAELVLWSDLEVVASKRNWSDDGPIR
>NC_007164.1|WP_011273275.1|778421_779096_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MTTFTRLHLNPSSRQARKLLGNPQAMHAAVLSCFPKEVSEKERILWRHDGKVRGADEHFVYIVGPDSCDPTKIAEQTGSESDPQKASYNRLLEALADGQQWHYEVVLNPVAAKKAPGSPRGTRGKLTALVGEAAQLEWFNTKAKSCGFTPLETLIVERKTLRFSKLAKNPKGRQVVIGTVRYRGTLQIDDVETFKKSLVEGIGRGKAYGCGLLTLAKPTPSKTS
>NC_007164.1|WP_005296216.1|779092_779800_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MPSTLLLRLSGPMQSWGVSSRFKQRATEQVPTKSGVLGLLAAAQGRRRTDDLQDLAALTFAVRVDQPGSLLRDYQTAQPWQKRPKDNANLVTRYYLEDAVFVAAVESDNDSFIDELASAVQRPRFPLFLGRRSCPAPPNLYLGTFRGSAVDALRATDWQATRAHRKTRAPKLSLPIFRDATQGETGIARRDVPISFSQEHREYGWRDVVQDKTGVPVENDLGSTNDPFMEAVMQA
>NC_007164.1|WP_005296213.1|779799_780930_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSITIDFHALQTLPPSLINRDDTGAPKTAIFGGAPRQRVSSQAWKRAIRKDFGEKFPTGFVGYRTRRAIELVADRIQELDTSIEEAEATTLSEKVFTAAGFKLTKRKTAKAEGEEVEQKSELGYLLFLSVRQVSNLAQYAIDHREENKFPKREVSVLFDQEHGVDISMFGRMVAEAPDFNVDASVQVAHAIGVHESEPEFDFYTAVDDMVEADEEVGAAMMGTVQMMSSTLYRFATLDVDSLAENLGDQSVLAEAIKAFTESFITSLPTGKQNTFAHNSVPELVYVTVRNDRSISLVNAFEEPVVSENNQGRRKSAADRLAREAEQIQNTYGFVPQAAFVMSLGDLADAFIEIDLAKKTTLPELVEAVAEAATQER
>NC_007164.1|WP_005296210.1|780958_781594_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MDQTTDDRPRLSSAVAATCSQLQADYLGRTGYPNQARARGTLAELRKSAGQPVDKNPLVFESVLSSLVVLLSEKEVGRGDTPSPSEEAAFHALTFFALHMQGATHEVHDESHSFASACGRLAQTSESKSIKGRFDALVLARTAQSRLIQTRSLISLLRSNDLRFNYGWFAADLRKLSNPRTRNGVLLRWGRDFAFARYPRDIDGSATTQEN
>NC_007164.1|WP_111712227.1|781638_783333_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MPAMAYRKYTAELHTKGRTIVTESFSLLDQPWILTTLTDGSAAELSLREIFDGSHSVASIRGDSPLQDVAIYRLLLTVYWCAHRQELLSDPGTELDMAEWIPDRLEAAAENEPDNTVLNYLERYADRFDLLDPKQPFMQVADLHTSKNATTDVRRIVPDFEDDYFTLRAGDGALSLTYAEAARWLIYVQAYDYSGIKSGAVGDPRVKGGRGYPIGTGWTGAITATIILGENLQETLALNTTGGALQAKNDHPVWEREPDTSAQRLDPANKDGIYPKGPAEILTWQSRRIRLFPDGGLITQVLVSNGDRIPNANANVQDDPMTPYRFSKNKSTKTLDVYYPKPLDSQRTMWRSLEPLIALETDPVYDAKNRAPKRPKTIDQLAYLKENEVDLPETLNVSMTSMEYGPNSAVVGISISTQIELPLEILPKSALNQRQAVLNLAAATSQAGTMLGSFAGQLFQAAGGDYEFQPAATDTLLAELEPKFSEWMKSLHGADLEPRLKAWEMTVRNAVLEHADVLLVGAGPKALVGRIIESNDDERFVSAGTVMNWLQRKLREILPRTVPR
>NC_007164.1|WP_011273277.1|783399_786252_-|CRISPR-associated-helicase/endonuclease-Cas3
MTDPHSAPLFDLDSWNDLVDSFSPTASAFLAKSGDEHGPMSLVQHMVDSGAVATYLWDTWFSPQTKDFLSRSTRLPPEHIRSLAVFLVAAHDVGKISGPFLRKLRSPETNAPLLYPLENAGIPIPDLTPDEDVANLAHPLYSRELLKRWLKTHGLKAPVALSLTQTVEAHHGWLTTAGRKAVTTFVNSYPPEWQSAVDEILDTLASTAHVQPALDGLEGKPPTTAIQIITGFTVMCDWLASNTDFFPLRFSGSQADRIKLGMAKAKFDLHTEFKHFSEDPTQIAENYRVSFAWPESATPRPVQFAVAELLNSNSPGPTLLIIEAPTGEGKTEGALQAALLFAQHNHASGAILAAPTMATANGLFKRFSCWVENITENSAVSSLYLAHSKNRLNKDYRKLRYSDIGEDCADHGTVIATDWLSGRKNGLLSNFVVGTIDQVLMMALQIRHSMLRHLALAGKVVIFDEVHAYSTYTNEYLAETLRWLAAYGVPVILLSATLPTSRKKELVTAYGGQMHKNDLALAGEGYPLLTLVTEEGVSEQAVTPRPDDMHAKVEIIDDSVEELTRLVTELCSDGGVVLVICNTIKRAQEAFTALDSVFPDEVRLHHSAFTGLDRARHEEDLLNELGPASQRKQGRPPLRIVCGTQTLEQSLDIDADALITDIAPMDLIIQRAGRLHRHQRPDSDRPEKLRDARIYIRGVEETTPVPIWDTGTEYIYDDALLLTTYQLLSTEVVETGFRRPSDVPQLVQRAYDLDADHNFPEAWAARWEESKTSSRGKDDSDKSRSKVFRIPSPDETGKRLDSLFEMLVHDRSEEEIKATASVRDADNSIEIIPIVDDEYGYRPLPGLNNDQPECVVEDTTIPNFDTAFQLAASTVRLPTMFTRSDKVWDRTVDALEDQTPEGWKDHYLLRGQVALRLDQNLGATLADVKINYSELLGLRTEGFPGSRNGA
>NC_007164.1|WP_011273282.1|788858_789587_+|amino-acid-ABC-transporter-ATP-binding-protein
MIELKGVNKHFGEYHALRDINLEVPAGQVVVILGPSGSGKSTLCRTINRLETIDDGEIRIDGELLPEEGKELAKLRAEVGMVFQQFNLFSHMTIRDNVTLAPTKVRKISKEEARKTAEKLLDRVGIAAQADKYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPEMINEVLDVMTDLAKGGMTMVVVTHEMSFARRVADRILFMADGAIVEDADPETFFTNPQSDRAKDFLAKIVNH
>NC_007164.1|WP_005296194.1|789606_790503_+|glutamate-ABC-transporter-substrate-binding-protein
MSTFKSALKRLTAAVVATASVVALTACGSGGARDLLADIESGHVVMGTKYDQPNLGERTPDKQFAGLDTDVSRYVVEYIAKKHGWATPEIEWRETPSAQRETLINNGEVNMITATYSINKGRLKAVDFAGPYVVTHQALLVREDSGINGLNDIAPGTRLCSVSGSTPAQKVKDALPEVQLQEFDTYAACAEGLKQGVVDATTTDATILAGFAQRYKERFDEDYSVIQLKNDDGSFWTNENYGIGLPKGDDKAKAEVNEALNEMHDSGEFQKIVAKNLGDNVDIGEKPKIGDLSFVDEK

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Crispr_ID: NC_007164_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NC_007164_4

2416085-2416172

Orphan

Consensus_repeat	Method
CCACATTCCCGATCTAACGACATTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NC_007164_4

>merge|NC_007164|4|2416085-2416172|CRISPRCasFinder
CCACATTCCCGATCTAACGACATTCCTGGCCCGCCGGAGCCCCTCCAGGCACCAAACCGGCCCCACATTCCCGACCTAACGACATTCC

>NC_007164|4|4|2416085-2416172|CRISPRCasFinder
CCACATTCCCGATCTAACGACATTCC	TGGCCCGCCGGAGCCCCTCCAGGCACCAAACCGGCC
CCACATTCCCGACCTAACGACATTCC

Protein	Signature genes	Signature genes Name	Protein_function
NC_007164.1\|WP_005292473.1\|2414154_2415798_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NC_007164.1\|WP_011274322.1\|2418161_2418344_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_005292458.1\|2408900_2409272_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NC_007164.1\|WP_011274318.1\|2407480_2408056_-\|hypothetical-protein	unknown	unknown	unknown
NC_007164.1\|WP_005292471.1\|2412160_2413651_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|180177
NC_007164.1\|WP_011274324.1\|2422640_2423042_-\|DUF5318-family-protein	unknown	unknown	gnl\|CDD\|379953
NC_007164.1\|WP_005292489.1\|2423172_2424264_+\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
NC_007164.1\|WP_173362265.1\|2419942_2422003_-\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223815
NC_007164.1\|WP_005292478.1\|2416992_2417595_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236092
NC_007164.1\|WP_005292462.1\|2409977_2410400_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NC_007164.1\|WP_005292484.1\|2418336_2419962_-\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|227937
NC_007164.1\|WP_005292456.1\|2408235_2408838_+\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186
NC_007164.1\|WP_005292491.1\|2424434_2424902_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NC_007164.1\|WP_005292493.1\|2424927_2425854_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NC_007164.1\|WP_005292467.1\|2410974_2411520_-\|polyisoprenoid-binding-protein	unknown	unknown	gnl\|CDD\|225228
NC_007164.1\|WP_011274319.1\|2409261_2409900_+\|DUF4442-domain-containing-protein	unknown	unknown	gnl\|CDD\|373120
NC_007164.1\|WP_011274321.1\|2417733_2418021_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NC_007164.1\|WP_005292476.1\|2416457_2416910_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NC_007164.1\|WP_005292465.1\|2410396_2410909_-\|CrcB-family-protein	unknown	unknown	gnl\|CDD\|376809
NC_007164.1\|WP_005292468.1\|2411636_2412128_+\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759

Protein	Function_ID	Function_description	E-value
NC_007164.1\|WP_005292473.1\|2414154_2415798_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	2.38879e-76
NC_007164.1\|WP_005292491.1\|2424434_2424902_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.33385e-19
NC_007164.1\|WP_005292458.1\|2408900_2409272_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	4.82799e-38
NC_007164.1\|WP_005292471.1\|2412160_2413651_-\|replicative-DNA-helicase	gnl\|CDD\|180177	PRK05636, PRK05636, replicative DNA helicase; Provisional.	0
NC_007164.1\|WP_011274324.1\|2422640_2423042_-\|DUF5318-family-protein	gnl\|CDD\|379953	pfam17249, DUF5318, Family of unknown function (DUF5318). This family of unknown function is mostly found in Actinobacteria.	6.45429e-26
NC_007164.1\|WP_005292489.1\|2423172_2424264_+\|inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NC_007164.1\|WP_173362265.1\|2419942_2422003_-\|transglycosylase-domain-containing-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	9.36953e-162
NC_007164.1\|WP_005292478.1\|2416992_2417595_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236092	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional.	2.15689e-91
NC_007164.1\|WP_005292462.1\|2409977_2410400_-\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	1.53324e-10
NC_007164.1\|WP_005292484.1\|2418336_2419962_-\|DUF2029-domain-containing-protein	gnl\|CDD\|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	1.2164e-72
NC_007164.1\|WP_005292456.1\|2408235_2408838_+\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	3.59887e-107
NC_007164.1\|WP_005292493.1\|2424927_2425854_+\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	1.82412e-17
NC_007164.1\|WP_005292467.1\|2410974_2411520_-\|polyisoprenoid-binding-protein	gnl\|CDD\|225228	COG2353, COG2353, Uncharacterized conserved protein [Function unknown].	8.70732e-58
NC_007164.1\|WP_011274319.1\|2409261_2409900_+\|DUF4442-domain-containing-protein	gnl\|CDD\|373120	pfam14539, DUF4442, Domain of unknown function (DUF4442). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 139 and 165 amino acids in length. There is a conserved PYF sequence motif. There is a single completely conserved residue N that may be functionally important.	4.59445e-65
NC_007164.1\|WP_011274321.1\|2417733_2418021_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.16648e-35
NC_007164.1\|WP_005292476.1\|2416457_2416910_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.76657e-57
NC_007164.1\|WP_005292465.1\|2410396_2410909_-\|CrcB-family-protein	gnl\|CDD\|376809	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB). CRCB is a family of bacterial integral membrane proteins with four TMs.. Over expression in E. coli also leads to camphor resistance.	1.68498e-15
NC_007164.1\|WP_005292468.1\|2411636_2412128_+\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	3.22197e-12

>NC_007164.1|WP_005292473.1|2414154_2415798_+|NAD(P)/FAD-dependent-oxidoreductase
MNATPDHSTADQTSTATTPLPALANASAEHPLDLLIVGAGLSGIDIAYHVSKNFPSWNWAAVDSNYDVGGTWATFQYPGIRSDSDMATFSLPFKKWPHKGTLGSGKQIRDYCHEAAAEIGMLDRLQLSTWVETVNFHTDRGLWEVTMRLGRTGRANSEGTDDSGLAQPTLTTWTRRLHFATGYYRHSEGFTAQIEGVDTFQGTALHPQQWPRDLDVRGKKVTVIGSGATAITLVPALHSMGADVTMLQRTPTYIAPLPETDTISSLVGLGLSTQPGTFGHRLARSLHIGRDMAQYHLCQTFPSIAKLVFRGWNRLYLPADEVRRNFTPPYGPWDQRVCKSPGGDFFKAVRGGARVVTDHIDRVDAGGVRLRSGGYIEADVLVIATGLQLLAFGDANFSVDGTPVPTESLVAYRAMMANRLPNFSYTIGYLNQSWTLRADMTSRYLVQLWKDMEARGEQWACPLLPAGEAADLPLLEMSSGYIQRSVATLPRQGAGDPWRMEQDYIKERRTYTGADNKHDMAFGVEALEAAAPLAAGEGGGGAAELRQ
>NC_007164.1|WP_005292471.1|2412160_2413651_-|replicative-DNA-helicase
MSKNAGMNFDDGAPLPDEPFDDFGGSQDFVGGRDFGSGRGGRRGGSGTQQIVREMPQNPEAEQGVLGGMMLNKDAIADVVEVLVGDDFYVPKHKTIFDAILQLYGEGKEVDPVILGGRLDRDGVLGFIGGAGYLHSIIQKTPTSANVGYYASIVREKATLRRLVQAGTTIVQLGYAGTEGADVDNVVDRAQQEMFAITNDAAKEDYEVFAELVASTVGEIEQLESQDGIEMGIPTGFKDLDDLTNGLRGGQMVIVAARPGVGKSTLALDFMRSASIEHGKASALFSLEMSKSEVMMRIFSAEAEVRLASMRGGKLTDDDWDRLTVRIGEIEDAPIYIDDSPNLTMMEIRSKARRLKQQVDLQLIVVDYLQLMSSGKRVESRQQEVSEFSRQLKLLAKEVNVPVIAISQLNRGVESRGDDALPRVSDLRESGSLEQDADMVMLINRPDSQNPDHERAGEADIILAKHRGGPIGTVTVANQLQFSKFSDMARDISPMP
>NC_007164.1|WP_005292468.1|2411636_2412128_+|winged-helix-turn-helix-transcriptional-regulator
MTQEDTSPPLHNDANEGTKWLNSREQQVWRAWINAHIHINAELAQQLSAETSLSLADYEVLVHLSEAPDHQQRIVALANMMQWSRSRLSHQITRMSKRGLVRRTTCDADGRGAYVVLEPAGLEAIATAAPGHVAKVRELVFDQLSDAEIEQFYEILAKLNGKP
>NC_007164.1|WP_005292467.1|2410974_2411520_-|polyisoprenoid-binding-protein
MTNVNNYSGNFQIDAAHSEIGFVARHAMVTKVRGAFTDFEGTATTGEKLEGAKIEVKIDVNSVDTRNADRDAHLTTGDFFDTEKYPHITFTSTDITAAGESTLRVTGDLTIKDVTKPVTIDFDFTGEVQDPWGQTRVGFEGSTSINRRDFGLEWNTALDGGGVLVSEKIALNFDISAVKQS
>NC_007164.1|WP_005292465.1|2410396_2410909_-|CrcB-family-protein
MNRLPPVALVFLGGALGAIIRWTLTVWIPALGDPTRVLGAATPLNIIGGIPLGDIALLVVNVLGALLLGLLVGMIPDSAHPRRTFWGTGVLGGFTSFSSLAAAVDATTDSASTILIGGTYGVFTLALGLIAAAMGLRLGRDLNELARLRRAADGADEPQDPHEPHKGGAR
>NC_007164.1|WP_005292462.1|2409977_2410400_-|CrcB-family-protein
MNTGATLIELLAVALGGGTGAAARYVLDTHLKSKHGWAPLWSLAVVNLLGTVVLGLVLGYTSQHLDGAAGSTSAGETQDILYPLLGIGLAGGFTTFSTVMVEVFTRPQPARRIAGVVGMAVVCCAVFLPALWCGALLAGA
>NC_007164.1|WP_011274319.1|2409261_2409900_+|DUF4442-domain-containing-protein
MVAICFPSGRLCLSKNFVVGAPVKGGEHVFQHYATVALFHVRVLTMSIYDANANPSSTFKMYKQLANKPFGNGLFSAAAGFKAPYFLTVKPRVQELRPGFCKVRSKKWWLLNNHIGTFHAIAACNVAEFAMGMLAEASIPNTHRWLPQGMRTQYLKKTKGSLTATATAELPDFEKITQESGGQTVTVKIHFADDEGKESTYAEIDIWVTAKK
>NC_007164.1|WP_005292458.1|2408900_2409272_-|thioredoxin
MATIEITGANFQDTVQGDGIVVLDFWAEWCGPCKRFAPIFEQVSDEHPEAVFGKVDTEANQELSAALQIQSIPTLMLFRDGVLLARESGLLPAKALNELIAKAEELDMDEVRKQIEAEQAKEQ
>NC_007164.1|WP_005292456.1|2408235_2408838_+|NAD(P)-dependent-alcohol-dehydrogenase
MDAAAAATPLLCAGITTYSPLKHWGVGEGSRVAVVGMGGLGHVAVKLAAAMGAEVTVLSHSKSKEADGLAFGANRYVATKEEGWQEPFAAHFDLIINTVSAPLDPAPFISTLARGGTMVMLGLPPEKMQISADALIGKRRSVAGSAIGGIRDTQEMIDFCAAHDITAETEVIPAEDINTAYQRVLDSDVRYRFVIDVNTM
>NC_007164.1|WP_011274318.1|2407480_2408056_-|hypothetical-protein
MGRINPRKAAVALTVGMVGFAGTGMAVAKGGISANLALSGTFFTVTMSHMSGEEFSLFMDNDLKGDNHLPVARVKLQDAKASDMCLSTTVPNLPAVGEATLALRATGQNSVDAKDLIVGSTDIKGSLRMADPNLGIDAKQVNPEAPDDAWGLHSRRVQVVADKIVATSVGAKQLNASGVEASVRRGTENAC
>NC_007164.1|WP_005292476.1|2416457_2416910_-|50S-ribosomal-protein-L9
MKLILTANVDNLGVPGDIVEVKAGYGRNYLLPRGYAIVATRGAEKQIEGIKRAQEARQIRDLDHAREVKEELENLSGVTISVRTAESGKMFGSVTADNIVDAVKKANGRSLDKHSIKLRKGDVKATGVYSVDVQLHEGIVASLSFEVVSA
>NC_007164.1|WP_005292478.1|2416992_2417595_-|single-stranded-DNA-binding-protein
MAQGDTQITVVGNIVADPELRYTPNGAAVANFRVASTPRRYDQQAGQFVDGEPLFLTCNVWRQPAENVANSLSKGDRVIVTGRLRQRSYDDRNGERRTVFEIEVEEVGPSLRFATADINKSFRGGGQGGQGQGNGGNGGFGGGNAGGQGGFGGGNAGGQGQGNRGQNNQGFGGRNAAMDDDPWNSAPQSGFGDGDDEPPF
>NC_007164.1|WP_011274321.1|2417733_2418021_-|30S-ribosomal-protein-S6
MRQYEMMIIIDPSQDERTVAPSLDKYLDIVRKENGSVEKVDIWGKRRLEYPINKKDEGIYVVLDLKCESATVLEIDRLLNINDQILRTKVLRKDQ
>NC_007164.1|WP_011274322.1|2418161_2418344_-|hypothetical-protein
MDNTTIFITMASVLVGFLCVGGSFASFMYGKSKKQVWTLFSFAVLFLTIVPVGLAVFVAA
>NC_007164.1|WP_005292484.1|2418336_2419962_-|DUF2029-domain-containing-protein
MESSTHRKPIAAGQRAEQDSQPVSGQRAEQRILPSRTEPMARGFIRFIGGPPGAHAFIGRANWWTPLRVLLATAATFLIFGWLQKAQCIRTGFDGAGNPYVDWSGKRQFTSACYSDTVSLYAGRGLDKLDFPYFTSFTDDGVTRYMEYPVLTGLYQWLMAAIARPVEAVWNFLPLPQAAPAAIYFGVNAFFLALFWLIATGLMTKLTGNRVWDTLLMAASPLVIVHAFTNFDLLACAAAVAILTFWANRRPGWAGVATGVGVALKLWPAFIGGALILLCLRQRAWVPLAKLVGWTFGSWLIVNLPIMVFAPEGWSQFFKLNSERGWEGSTIYAVIAHILGNDAWNGVSPTRSVEGAETLNLLTGVLLLIALLALAWLVIFAAPRTPRVGQVAFLATLAFMITNKVWSPQYSIWLVPLLVLALPRWRLVFGWAALETVYWYLRMWQFLPANQAAPYWLVDTVTIVRLGLLVFMAVLVIREIMGRSPDRIREAHGGRDPLAGVLAEEPADAPTNHSARENGNGSGGEVGVKKKGAEKKESNDG
>NC_007164.1|WP_173362265.1|2419942_2422003_-|transglycosylase-domain-containing-protein
MAVLIIVPLVAFFTAYSVTKVPEPEELVNNQISYIMASDNNTELARIVPPEGNRQNVKLDEVPMPVRQAVLAAEDREFYSNPGFSVSGFARAAVGQVLGREGAGGGSTITQQYVKNALVGDEFSLSRKAKELVISAKMAREWSKDEILEAYLNTIYFGRNAYGISAASHAYFDKDVKDLTPEEGAVLAATIQAPSGLDPWTNRERAESRWNYVMDGMVGIGAMKEADRKNAVYPQVKDPAETAESTQAVGTNGLIKTKVIEELERAGITEEQVNTGGLKITTTIDAKMQADAVDEIHKKLEGQQEGLRTAVASVDPKTGGVRSWYGGDDPVGFDFAGAGLQTGSTFKILALAAYLDQGGSIYDQFDSSPVMTGDAQVNNVGGASCGTCSIAEALKQSLNTSFIRLTQSLKGGPQDVADMAHRLGVAEELPGVGKTLQEANGKPAEGITLGMYQSSPLDMATALATLTNGGTYHRPHFVQKVENSNGDVLLDNTNDDGDRVVSEEVANGVIQAMQPIAAYSNGNTLAGGRPSAAKTGTAQLGDTGENKDAWMIGSTPQLSSAVWVGTAEGKPIHNSYGGVMYGSGLPAQIWKGVMDRSLEGKEVEQFGTGAAASSGGGGSVGSGSAQGGEAAAQEQPVEQEASEPSSAPAPAQQPAPQPAPQRPAPQGGNPPQNNDLQDLIDGILNP
>NC_007164.1|WP_011274324.1|2422640_2423042_-|DUF5318-family-protein
MSISRRVIDRSLDRRRTLSQVRGAERFVGDATPRLLSSAEVLGQAVDRPCPVCGKSDLRETLWIHGDVLGEKSGTARSVREINGVIDALVNVQQDAEFSIHTVEVCMKCRWNHLIREELIGITIDNQETRLVE
>NC_007164.1|WP_005292489.1|2423172_2424264_+|inositol-3-phosphate-synthase
MTSKTCNIAIVGLGNCASSLIQGIHLYSDAAATENVPGLMHTQFGPYSVGDVHVTAAFDVDADKVGKDVSEAIDAGMNCTIKIADVPHTGVTVQRGHTFDGLGRHYQESITESDAEPVDVPQALRDANVDVLVSYLPVGSEEADRFYAQCAIDAGCAFVNALPVFIASDPEWAEKFRAAGLPIVGDDIKSQVGATITHRVLARLFEERGVRLERTMQLNVGGNMDFKNMLDRDRLESKKISKTQAVTSNLTESPLAGKVHDRNVHIGPSDYVEWLDDRKWAYVRLEGSAFGEVPLNLEYKLEVWDSPNSAGIIIDAVRAAKIALDRGVAGPVEAASSYLMKSPPTQLPDDVARAQLEEFINGA
>NC_007164.1|WP_005292491.1|2424434_2424902_+|MarR-family-transcriptional-regulator
MASTPLEIAKKLRLPLTRLYLLYFRQTESSHISMAQLSILMILEENGPMRISQIAATETIRMPTASNAVNQLETMELVTRVRDTSDRRGVSVALTDKGREELDRLGEERAEQLASMLDSLSEEELKEVADATSVIELVLRRYTEAIEAKLNNDQH
>NC_007164.1|WP_005292493.1|2424927_2425854_+|universal-stress-protein
MSNTPKPVNPLRLLLTWRPESAGDEAAQVAAWIGRTETIALRTATVISRSWTAQPELEFDSYSEWIEKESKAVSSAAQKALALAKLPEKMLDAEPSTVTVDHSETKALIDAAAEFNADMMVLGSHPAAPHSRFRIGSTADALLHYAPLPLLLAPRTPKLSKRGVTRVNCSYIDTDQSHEALRRAADLAHRWNVPLRLVAFSPRGATMYPTETEFIDNSDMMVEWREQALALLDRGRDRALNRHSDLTVQMEVGSGYGWSGAINALKWKKGDLLVMGSSTLGGFHRVFIGPSTNQILRHSPVPVLLSTV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	273109-273135	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP020932	Marinobacter salarius strain SMR5 plasmid pSMR5, complete sequence	47629-47655	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	266647-266673	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP020040	Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence	256489-256515	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	389008-389034	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	MT639646	Microbacterium phage Rasputia, complete genome	82939-82965	5	0.815
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1753082-1753108	6	0.778
NC_007164_1	1.1\|313253\|27\|NC_007164\|CRISPRCasFinder	313253-313279	27	MH744421	Arthrobacter phage Moki, complete genome	36716-36742	6	0.778
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	81448-81479	6	0.812
NC_007164_3	3.8\|773822\|32\|NC_007164\|CRISPRCasFinder,CRT	773822-773853	32	NZ_CP013635	Rhizobium sp. N324 plasmid pRspN324e, complete sequence	567452-567483	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	MK061410	Gordonia phage Eyes, complete genome	34678-34709	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	MK878901	Gordonia phage HannahD, complete genome	34320-34351	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	MK967377	Gordonia phage MagicMan, complete genome	34560-34591	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	KU998235	Gordonia phage Bowser, complete genome	34634-34665	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	MH479915	Gordonia phage GEazy, complete genome	34953-34984	7	0.781
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NC_031255	Gordonia phage Schwabeltier, complete genome	34753-34784	7	0.781
NC_007164_3	3.18\|774432\|32\|NC_007164\|CRISPRCasFinder,CRT	774432-774463	32	NZ_LR699555	Paraburkholderia sp. Msb3 isolate PDMSB31 plasmid pI	62197-62228	7	0.781
NC_007164_3	3.21\|774615\|32\|NC_007164\|CRISPRCasFinder,CRT	774615-774646	32	NZ_CP043044	Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence	92760-92791	7	0.781
NC_007164_3	3.25\|774859\|32\|NC_007164\|CRISPRCasFinder,CRT	774859-774890	32	NC_017791	Deinococcus gobiensis I-0 plasmid P2, complete sequence	367534-367565	7	0.781
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	560622-560653	7	0.781
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	NZ_CP019237	Rhodoferax koreense strain DCY-110 plasmid unnamed1	20677-20708	7	0.781
NC_007164_3	3.86\|774920\|33\|NC_007164\|PILER-CR	774920-774952	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	560621-560653	7	0.788
NC_007164_3	3.4\|773578\|32\|NC_007164\|CRISPRCasFinder,CRT	773578-773609	32	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	68843-68874	8	0.75
NC_007164_3	3.7\|773761\|32\|NC_007164\|CRISPRCasFinder,CRT	773761-773792	32	MH807815	Dickeya phage Luksen, complete genome	1817-1848	8	0.75
NC_007164_3	3.9\|773883\|32\|NC_007164\|CRISPRCasFinder,CRT	773883-773914	32	MH807815	Dickeya phage Luksen, complete genome	1817-1848	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010612	Phaeobacter inhibens strain P92 plasmid pP92_b, complete sequence	167978-168009	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010624	Phaeobacter inhibens strain P51 plasmid pP51_a, complete sequence	160749-160780	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010669	Phaeobacter inhibens strain P57 plasmid pP57_a, complete sequence	160749-160780	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NC_018291	Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence	156871-156902	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010596	Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence	158029-158060	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP031953	Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence	178290-178321	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NC_018421	Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence	178197-178228	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010600	Phaeobacter inhibens strain P83 plasmid pP83_a, complete sequence	168540-168571	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP031949	Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence	156872-156903	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010742	Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence	178132-178163	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010618	Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence	182234-182265	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010726	Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence	168532-168563	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010706	Phaeobacter inhibens strain P66 plasmid pP66_a, complete sequence	168540-168571	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010697	Phaeobacter inhibens strain P24 plasmid pP24_a, complete sequence	160749-160780	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010746	Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence	175648-175679	8	0.75
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010736	Phaeobacter inhibens strain P72 plasmid pP72_a, complete sequence	168561-168592	8	0.75
NC_007164_3	3.14\|774188\|32\|NC_007164\|CRISPRCasFinder,CRT	774188-774219	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	260067-260098	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	131387-131418	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	111978-112009	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	87064-87095	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NC_013531	Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence	13781-13812	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	63774-63805	8	0.75
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NZ_CP017427	Methylobacterium sp. XJLW plasmid unnamed1, complete sequence	13119-13150	8	0.75
NC_007164_3	3.16\|774310\|32\|NC_007164\|CRISPRCasFinder,CRT	774310-774341	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1481980-1482011	8	0.75
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	560610-560641	8	0.75
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	MK816297	Pseudomonas virus PBPA162, complete genome	26100-26131	8	0.75
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	MN871474	UNVERIFIED: Pseudomonas virus Pa-oumiga, complete genome	17082-17113	8	0.75
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	MN871471	UNVERIFIED: Pseudomonas virus Pa-V, complete genome	17081-17112	8	0.75
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	MN871472	UNVERIFIED: Pseudomonas virus Pa-X, complete genome	15989-16020	8	0.75
NC_007164_3	3.30\|775164\|32\|NC_007164\|CRISPRCasFinder,CRT	775164-775195	32	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	846136-846167	8	0.75
NC_007164_3	3.30\|775164\|32\|NC_007164\|CRISPRCasFinder,CRT	775164-775195	32	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	322772-322803	8	0.75
NC_007164_3	3.30\|775164\|32\|NC_007164\|CRISPRCasFinder,CRT	775164-775195	32	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	291804-291835	8	0.75
NC_007164_3	3.38\|775652\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775652-775683	32	NZ_CP045419	Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence	128247-128278	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	835877-835908	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	835595-835626	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	735741-735772	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	805807-805838	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	734856-734887	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	737398-737429	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	737387-737418	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	735728-735759	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	735747-735778	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	735725-735756	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	835945-835976	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	835944-835975	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	835929-835960	8	0.75
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	NC_014663	Acinetobacter phage Acj9, complete genome	151101-151132	8	0.75
NC_007164_3	3.47\|776201\|32\|NC_007164\|CRISPRCasFinder,CRT	776201-776232	32	NZ_CP016369	Phaeobacter porticola strain P97 plasmid pP97_e, complete sequence	27594-27625	8	0.75
NC_007164_3	3.51\|776445\|32\|NC_007164\|CRISPRCasFinder,CRT	776445-776476	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	537074-537105	8	0.75
NC_007164_3	3.56\|776750\|32\|NC_007164\|CRISPRCasFinder,CRT	776750-776781	32	NZ_CP013927	Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence	196581-196612	8	0.75
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	MK061410	Gordonia phage Eyes, complete genome	34678-34710	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	MK878901	Gordonia phage HannahD, complete genome	34320-34352	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	MK967377	Gordonia phage MagicMan, complete genome	34560-34592	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	KU998235	Gordonia phage Bowser, complete genome	34634-34666	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	MH479915	Gordonia phage GEazy, complete genome	34953-34985	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	NC_031255	Gordonia phage Schwabeltier, complete genome	34753-34785	8	0.758
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	131386-131418	8	0.758
NC_007164_3	3.78\|774432\|33\|NC_007164\|PILER-CR	774432-774464	33	NZ_LR699555	Paraburkholderia sp. Msb3 isolate PDMSB31 plasmid pI	62196-62228	8	0.758
NC_007164_3	3.85\|774859\|33\|NC_007164\|PILER-CR	774859-774891	33	NC_017791	Deinococcus gobiensis I-0 plasmid P2, complete sequence	367533-367565	8	0.758
NC_007164_3	3.86\|774920\|33\|NC_007164\|PILER-CR	774920-774952	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	560609-560641	8	0.758
NC_007164_3	3.86\|774920\|33\|NC_007164\|PILER-CR	774920-774952	33	NZ_CP019237	Rhodoferax koreense strain DCY-110 plasmid unnamed1	20676-20708	8	0.758
NC_007164_3	3.89\|776018\|33\|NC_007164\|PILER-CR	776018-776050	33	NC_014663	Acinetobacter phage Acj9, complete genome	151101-151133	8	0.758
NC_007164_3	3.92\|776201\|33\|NC_007164\|PILER-CR	776201-776233	33	NZ_CP016369	Phaeobacter porticola strain P97 plasmid pP97_e, complete sequence	27593-27625	8	0.758
NC_007164_3	3.5\|773639\|32\|NC_007164\|CRISPRCasFinder,CRT	773639-773670	32	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	139678-139709	9	0.719
NC_007164_3	3.12\|774066\|32\|NC_007164\|CRISPRCasFinder,CRT	774066-774097	32	KF692088	Arthrobacter phage vB_ArS-ArV2, complete genome	35602-35633	9	0.719
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	NZ_CP010630	Phaeobacter inhibens strain P78 plasmid pP78_a, complete sequence	191815-191846	9	0.719
NC_007164_3	3.13\|774127\|32\|NC_007164\|CRISPRCasFinder,CRT	774127-774158	32	MN850623	Escherichia phage sortsyn, complete genome	36770-36801	9	0.719
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	NZ_CP039905	Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence	130132-130163	9	0.719
NC_007164_3	3.15\|774249\|32\|NC_007164\|CRISPRCasFinder,CRT	774249-774280	32	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	435427-435458	9	0.719
NC_007164_3	3.16\|774310\|32\|NC_007164\|CRISPRCasFinder,CRT	774310-774341	32	MK496050	Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence	458603-458634	9	0.719
NC_007164_3	3.16\|774310\|32\|NC_007164\|CRISPRCasFinder,CRT	774310-774341	32	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	36550-36581	9	0.719
NC_007164_3	3.24\|774798\|32\|NC_007164\|CRISPRCasFinder,CRT	774798-774829	32	AP013453	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C28	358-389	9	0.719
NC_007164_3	3.25\|774859\|32\|NC_007164\|CRISPRCasFinder,CRT	774859-774890	32	MN694402	Marine virus AFVG_250M552, complete genome	25481-25512	9	0.719
NC_007164_3	3.25\|774859\|32\|NC_007164\|CRISPRCasFinder,CRT	774859-774890	32	MN693651	Marine virus AFVG_250M821, complete genome	15367-15398	9	0.719
NC_007164_3	3.25\|774859\|32\|NC_007164\|CRISPRCasFinder,CRT	774859-774890	32	MN694091	Marine virus AFVG_250M822, complete genome	24256-24287	9	0.719
NC_007164_3	3.25\|774859\|32\|NC_007164\|CRISPRCasFinder,CRT	774859-774890	32	MN694562	Marine virus AFVG_250M829, complete genome	15921-15952	9	0.719
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	44690-44721	9	0.719
NC_007164_3	3.28\|775042\|32\|NC_007164\|CRISPRCasFinder,CRT	775042-775073	32	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	572888-572919	9	0.719
NC_007164_3	3.29\|775103\|32\|NC_007164\|CRISPRCasFinder,CRT	775103-775134	32	NZ_CP039697	Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence	134459-134490	9	0.719
NC_007164_3	3.29\|775103\|32\|NC_007164\|CRISPRCasFinder,CRT	775103-775134	32	NZ_CP005086	Sphingobium sp. TKS plasmid pTK2, complete sequence	12789-12820	9	0.719
NC_007164_3	3.31\|775225\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775225-775256	32	NZ_CP010866	Marinovum algicola DG 898 plasmid pMaD11, complete sequence	1518-1549	9	0.719
NC_007164_3	3.37\|775591\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775591-775622	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	100847-100878	9	0.719
NC_007164_3	3.38\|775652\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775652-775683	32	NZ_LT969521	Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 2	3346-3377	9	0.719
NC_007164_3	3.38\|775652\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775652-775683	32	NZ_CP032256	Pseudomonas aeruginosa strain AR_0111 plasmid unnamed, complete sequence	56675-56706	9	0.719
NC_007164_3	3.38\|775652\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775652-775683	32	NZ_CP034355	Pseudomonas aeruginosa strain IMP-13 plasmid pPYO_TB, complete sequence	60916-60947	9	0.719
NC_007164_3	3.40\|775774\|32\|NC_007164\|CRISPRCasFinder,CRT	775774-775805	32	MN033449	Leviviridae sp. isolate H4_Rhizo_45_scaffold_1596 hypothetical protein (H4Rhizo451596_000001) gene, partial cds; and hypothetical protein (H4Rhizo451596_000002) and RNA-dependent RNA polymerase (H4Rhizo451596_000003) genes, complete cds	427-458	9	0.719
NC_007164_3	3.43\|775957\|32\|NC_007164\|CRISPRCasFinder,CRT	775957-775988	32	NC_010933	Bacillus cereus strain G9241 plasmid pBC210, complete sequence	151169-151200	9	0.719
NC_007164_3	3.43\|775957\|32\|NC_007164\|CRISPRCasFinder,CRT	775957-775988	32	NZ_CP009940	Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence	36413-36444	9	0.719
NC_007164_3	3.43\|775957\|32\|NC_007164\|CRISPRCasFinder,CRT	775957-775988	32	NZ_CP009591	Bacillus cereus G9241 plasmid pBC210, complete sequence	71194-71225	9	0.719
NC_007164_3	3.46\|776140\|32\|NC_007164\|CRISPRCasFinder,CRT	776140-776171	32	NZ_CP015095	Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence	76900-76931	9	0.719
NC_007164_3	3.47\|776201\|32\|NC_007164\|CRISPRCasFinder,CRT	776201-776232	32	NC_042132	Gordonia phage Sour, complete genome	36255-36286	9	0.719
NC_007164_3	3.47\|776201\|32\|NC_007164\|CRISPRCasFinder,CRT	776201-776232	32	MT711979	Streptomyces phage Endor2, complete genome	25233-25264	9	0.719
NC_007164_3	3.47\|776201\|32\|NC_007164\|CRISPRCasFinder,CRT	776201-776232	32	MT701598	Streptomyces phage Sitrop, complete genome	22806-22837	9	0.719
NC_007164_3	3.49\|776323\|32\|NC_007164\|CRISPRCasFinder,CRT	776323-776354	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	657163-657194	9	0.719
NC_007164_3	3.53\|776567\|32\|NC_007164\|CRISPRCasFinder,CRT	776567-776598	32	NC_008342	Nitrosomonas eutropha C91 plasmid p2, complete sequence	1860-1891	9	0.719
NC_007164_3	3.64\|773578\|33\|NC_007164\|PILER-CR	773578-773610	33	NZ_CP044217	Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence	68842-68874	9	0.727
NC_007164_3	3.67\|773761\|33\|NC_007164\|PILER-CR	773761-773793	33	MH807815	Dickeya phage Luksen, complete genome	1816-1848	9	0.727
NC_007164_3	3.69\|773883\|33\|NC_007164\|PILER-CR	773883-773915	33	MH807815	Dickeya phage Luksen, complete genome	1816-1848	9	0.727
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	87064-87096	9	0.727
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	111977-112009	9	0.727
NC_007164_3	3.75\|774249\|33\|NC_007164\|PILER-CR	774249-774281	33	NC_013531	Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence	13780-13812	9	0.727
NC_007164_3	3.92\|776201\|33\|NC_007164\|PILER-CR	776201-776233	33	NC_042132	Gordonia phage Sour, complete genome	36255-36287	9	0.727
NC_007164_3	3.92\|776201\|33\|NC_007164\|PILER-CR	776201-776233	33	MT701598	Streptomyces phage Sitrop, complete genome	22805-22837	9	0.727
NC_007164_3	3.96\|776445\|33\|NC_007164\|PILER-CR	776445-776477	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	537074-537106	9	0.727
NC_007164_3	3.17\|774371\|32\|NC_007164\|CRISPRCasFinder,CRT	774371-774402	32	NZ_CP017663	Cronobacter sp. JZ38 plasmid unnamed1, complete sequence	71584-71615	10	0.688
NC_007164_3	3.26\|774920\|32\|NC_007164\|CRISPRCasFinder,CRT	774920-774951	32	JQ680373	Unidentified phage clone 2209_scaffold64 genomic sequence	24076-24107	10	0.688
NC_007164_3	3.30\|775164\|32\|NC_007164\|CRISPRCasFinder,CRT	775164-775195	32	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	267888-267919	10	0.688
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	MK977696	Gordonia phage SCentae, complete genome	124799-124830	10	0.688
NC_007164_3	3.44\|776018\|32\|NC_007164\|CRISPRCasFinder,CRT	776018-776049	32	MK977695	Gordonia phage Pupper, complete genome	124606-124637	10	0.688
NC_007164_3	3.46\|776140\|32\|NC_007164\|CRISPRCasFinder,CRT	776140-776171	32	KC292027	Halovirus HCTV-5, complete genome	66442-66473	10	0.688
NC_007164_3	3.54\|776628\|32\|NC_007164\|CRISPRCasFinder,CRT	776628-776659	32	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	163433-163464	10	0.688
NC_007164_3	3.57\|776811\|32\|NC_007164\|CRISPRCasFinder,CRT	776811-776842	32	MN694701	Marine virus AFVG_250M27, complete genome	5748-5779	10	0.688
NC_007164_3	3.58\|776872\|32\|NC_007164\|CRISPRCasFinder,CRT	776872-776903	32	NC_014839	Pantoea sp. At-9b plasmid pPAT9B02, complete sequence	128677-128708	10	0.688
NC_007164_3	3.58\|776872\|32\|NC_007164\|CRISPRCasFinder,CRT	776872-776903	32	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	123105-123136	10	0.688
NC_007164_3	3.76\|774310\|33\|NC_007164\|PILER-CR	774310-774342	33	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	36549-36581	10	0.697
NC_007164_3	3.76\|774310\|33\|NC_007164\|PILER-CR	774310-774342	33	MK496050	Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence	458603-458635	10	0.697
NC_007164_3	3.85\|774859\|33\|NC_007164\|PILER-CR	774859-774891	33	MN693651	Marine virus AFVG_250M821, complete genome	15366-15398	10	0.697
NC_007164_3	3.85\|774859\|33\|NC_007164\|PILER-CR	774859-774891	33	MN694562	Marine virus AFVG_250M829, complete genome	15920-15952	10	0.697
NC_007164_3	3.85\|774859\|33\|NC_007164\|PILER-CR	774859-774891	33	MN694402	Marine virus AFVG_250M552, complete genome	25481-25513	10	0.697
NC_007164_3	3.85\|774859\|33\|NC_007164\|PILER-CR	774859-774891	33	MN694091	Marine virus AFVG_250M822, complete genome	24256-24288	10	0.697
NC_007164_3	3.86\|774920\|33\|NC_007164\|PILER-CR	774920-774952	33	JQ680373	Unidentified phage clone 2209_scaffold64 genomic sequence	24076-24108	10	0.697
NC_007164_3	3.92\|776201\|33\|NC_007164\|PILER-CR	776201-776233	33	MT711979	Streptomyces phage Endor2, complete genome	25232-25264	10	0.697
NC_007164_3	3.98\|776567\|33\|NC_007164\|PILER-CR	776567-776599	33	NC_008342	Nitrosomonas eutropha C91 plasmid p2, complete sequence	1860-1892	10	0.697
NC_007164_3	3.99\|776628\|33\|NC_007164\|PILER-CR	776628-776660	33	NZ_CP030354	Novosphingobium sp. P6W plasmid pP6W1, complete sequence	163433-163465	10	0.697
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	199296-199327	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	MN183283	Arthrobacter phage BossLady, complete genome	16177-16208	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	MF189176	Arthrobacter phage Jordan, complete genome	16183-16214	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	MF189178	Arthrobacter phage Shade, complete genome	16162-16193	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	KU160668	Arthrobacter phage TaeYoung, complete genome	16187-16218	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	MT114161	Arthrobacter phage JKerns, complete genome	16213-16244	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	NC_041933	Arthrobacter phage Sonny, complete genome	16183-16214	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	NC_049468	Arthrobacter phage Zartrosa, complete genome	16186-16217	11	0.656
NC_007164_3	3.11\|774005\|32\|NC_007164\|CRISPRCasFinder,CRT	774005-774036	32	KU160656	Arthrobacter phage Martha, complete genome	16124-16155	11	0.656
NC_007164_3	3.33\|775347\|32\|NC_007164\|CRISPRCasFinder,CRT,PILER-CR	775347-775378	32	NZ_CP048110	Klebsiella michiganensis strain BD177 plasmid unnamed2	85602-85633	11	0.656

1. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
cgcgctgtgggcgaaggggtcgaacgg	Protospacer
* ****** ***************.

2. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP020932 (Marinobacter salarius strain SMR5 plasmid pSMR5, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ctctctgtcggcgaaggggtcggcacc	Protospacer
*** ******************.  .*

3. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ctcgctgtcggcgaagggtttgacgac	Protospacer
****************** *.**   *

4. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ctcgctgtcggcgaagggtttgacgac	Protospacer
****************** *.**   *

5. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ttgcctgtaggcgaacgggtcgaattc	Protospacer
.*  **** ****** ***********

6. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to MT639646 (Microbacterium phage Rasputia, complete genome) position: , mismatch: 5, identity: 0.815

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ctcgctgtcggcgtaggcgtcgagcac	Protospacer
************* *** *****.. *

7. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
gtcgctgtcggcgaaggggccgacgcg	Protospacer
 ******************.***  .

8. spacer 1.1|313253|27|NC_007164|CRISPRCasFinder matches to MH744421 (Arthrobacter phage Moki, complete genome) position: , mismatch: 6, identity: 0.778

ctcgctgtcggcgaaggggtcgaattc	CRISPR spacer
ctcgctgtcggcgcagaggtcgagcag	Protospacer
************* **.******..

9. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

atcacccagagcgtgccgggcgaccgccgatg--	CRISPR spacer
atcagccagagcgagccgggcga--gacggtggt	Protospacer
**** ******** *********  * **.**

10. spacer 3.8|773822|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP013635 (Rhizobium sp. N324 plasmid pRspN324e, complete sequence) position: , mismatch: 7, identity: 0.781

ttctatctcgtctccgaacccgttcgtcgtca----	CRISPR spacer
ttctggctcgtctccgaacc----cgtcatcatggc	Protospacer
****. **************    ****.***

11. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to MK061410 (Gordonia phage Eyes, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgat	Protospacer
* .*** ***.****************** ..

12. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to MK878901 (Gordonia phage HannahD, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
ggccacttcgtcaagggtggccgcgacgcgat	Protospacer
*. *** ***.****************** ..

13. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to MK967377 (Gordonia phage MagicMan, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgat	Protospacer
* .*** ***.****************** ..

14. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to KU998235 (Gordonia phage Bowser, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgat	Protospacer
* .*** ***.****************** ..

15. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to MH479915 (Gordonia phage GEazy, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
ggccacttcgtcaagggtggccgcgacgcgat	Protospacer
*. *** ***.****************** ..

16. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NC_031255 (Gordonia phage Schwabeltier, complete genome) position: , mismatch: 7, identity: 0.781

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgat	Protospacer
* .*** ***.****************** ..

17. spacer 3.18|774432|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_LR699555 (Paraburkholderia sp. Msb3 isolate PDMSB31 plasmid pI) position: , mismatch: 7, identity: 0.781

ggatgcagcccacgttgatattgatacgggca	CRISPR spacer
ggaacgcgcccacgttgatattggtacaggcg	Protospacer
***    ****************.***.***.

18. spacer 3.21|774615|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP043044 (Gluconobacter thailandicus strain HD924 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ggcgtgccgggcgaccgccgatgattcatccg	CRISPR spacer
ggcgtgtcgggcgaccggcgatgctgccgctg	Protospacer
******.********** ***** * *  *.*

19. spacer 3.25|774859|32|NC_007164|CRISPRCasFinder,CRT matches to NC_017791 (Deinococcus gobiensis I-0 plasmid P2, complete sequence) position: , mismatch: 7, identity: 0.781

cgccgccgcaattcccccggtggtgttgagtc	CRISPR spacer
cgccgccgcaactgccccggtggtggcgacga	Protospacer
***********.* *********** .**

20. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 7, identity: 0.781

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
cgctcccccgccgtctgcgccgccgtctgcgc	Protospacer
 * *.*  *** *********** ********

21. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP019237 (Rhodoferax koreense strain DCY-110 plasmid unnamed1) position: , mismatch: 7, identity: 0.781

aggttca---acgcggtctgcgccgcagtctgcgc	CRISPR spacer
---tccactcccgcggtcagcgccgctgtctgcgc	Protospacer
   *.**    ******* ******* ********

22. spacer 3.86|774920|33|NC_007164|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 7, identity: 0.788

aggttcaacgcggtctgcgccgcagtctgcgcc	CRISPR spacer
cgctcccccgccgtctgcgccgccgtctgcgcc	Protospacer
 * *.*  *** *********** *********

23. spacer 3.4|773578|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ctgacactggccaccccgccgcactcaaacac	CRISPR spacer
agcacactggccaccccgccgcgcacaagggc	Protospacer
   *******************.* ***. .*

24. spacer 3.7|773761|32|NC_007164|CRISPRCasFinder,CRT matches to MH807815 (Dickeya phage Luksen, complete genome) position: , mismatch: 8, identity: 0.75

atcttgccgatggactccttaaagcttttagc	CRISPR spacer
tacgccccgatggactccttaaggctcttatc	Protospacer
  * . ****************.***.*** *

25. spacer 3.9|773883|32|NC_007164|CRISPRCasFinder,CRT matches to MH807815 (Dickeya phage Luksen, complete genome) position: , mismatch: 8, identity: 0.75

atcttgccgatggactccttaaagcttttagc	CRISPR spacer
tacgccccgatggactccttaaggctcttatc	Protospacer
  * . ****************.***.*** *

26. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010612 (Phaeobacter inhibens strain P92 plasmid pP92_b, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

27. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010624 (Phaeobacter inhibens strain P51 plasmid pP51_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

28. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010669 (Phaeobacter inhibens strain P57 plasmid pP57_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

29. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NC_018291 (Phaeobacter inhibens DSM 17395 plasmid pPGA1_262, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

30. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010596 (Phaeobacter inhibens strain P10 plasmid pP10_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

31. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP031953 (Phaeobacter inhibens strain 2.10 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

32. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NC_018421 (Phaeobacter inhibens 2.10 plasmid pPGA2_239, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

33. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010600 (Phaeobacter inhibens strain P83 plasmid pP83_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

34. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP031949 (Phaeobacter inhibens strain BS107 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

35. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010742 (Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

36. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010618 (Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

37. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010726 (Phaeobacter inhibens strain P88 plasmid pP88_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

38. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010706 (Phaeobacter inhibens strain P66 plasmid pP66_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

39. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010697 (Phaeobacter inhibens strain P24 plasmid pP24_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

40. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010746 (Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

41. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010736 (Phaeobacter inhibens strain P72 plasmid pP72_a, complete sequence) position: , mismatch: 8, identity: 0.75

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgcgatg	Protospacer
********* ******** **** . . ***

42. spacer 3.14|774188|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 8, identity: 0.75

gctgtacttcgcgcgctctcgggctaaacggg	CRISPR spacer
gcgcgatttcgcccgctctcggggtaaacgtt	Protospacer
**   *.***** ********** ******

43. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
aaacgcatcgccaagggcggccgcgagatctg	Protospacer
.***.************.******** ..*

44. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
ctccggctcgccaatggtggccgtgacgccgc	Protospacer
   *.  ******* ********.********

45. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gtcggcatcgccaagggcggcctcgacgccta	Protospacer
*   .************.**** *******

46. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NC_013531 (Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
acgaactccgccaagggtgacggcgacgccgc	Protospacer
. . ** .***********.* **********

47. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
gcccgcttcgccaagggtggcctcgccgccat	Protospacer
*  *.* *************** ** ****..

48. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP017427 (Methylobacterium sp. XJLW plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
aagcgcatcgccaaaggtggccgcgccgtctg	Protospacer
.*.*.*********.********** **.*

49. spacer 3.16|774310|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 8, identity: 0.75

accccacccccgccgttttggttctccctcgg	CRISPR spacer
tcccgcggcctgccgttctggttctccctcgc	Protospacer
 ***    **.******.*************

50. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
gtctgcgccgccgtctgcgccgccgtctgcgc	Protospacer
.  * *. *** *********** ********

51. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to MK816297 (Pseudomonas virus PBPA162, complete genome) position: , mismatch: 8, identity: 0.75

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
ttctgcagagcggtctgtgcagcagtctgcgc	Protospacer
   * **. ********.** ***********

52. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to MN871474 (UNVERIFIED: Pseudomonas virus Pa-oumiga, complete genome) position: , mismatch: 8, identity: 0.75

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
ttctgcagagcggtctgtgcagcagtctgcgc	Protospacer
   * **. ********.** ***********

53. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to MN871471 (UNVERIFIED: Pseudomonas virus Pa-V, complete genome) position: , mismatch: 8, identity: 0.75

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
ttctgcagagcggtctgtgcagcagtctgcgc	Protospacer
   * **. ********.** ***********

54. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to MN871472 (UNVERIFIED: Pseudomonas virus Pa-X, complete genome) position: , mismatch: 8, identity: 0.75

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
ttctgcagagcggtctgtgcagcagtctgcgc	Protospacer
   * **. ********.** ***********

55. spacer 3.30|775164|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 8, identity: 0.75

tcttccttgacgttctcgttgcctgcgatcag	CRISPR spacer
tcttccttgccggtctcgttgccttccttgtc	Protospacer
********* ** *********** *  *

56. spacer 3.30|775164|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 8, identity: 0.75

tcttccttgacgttctcgttgcctgcgatcag	CRISPR spacer
tcttccttgccggtctcgttgccttccttgtc	Protospacer
********* ** *********** *  *

57. spacer 3.30|775164|32|NC_007164|CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 8, identity: 0.75

tcttccttgacgttctcgttgcctgcgatcag	CRISPR spacer
tcttccttgccggtctcgttgccttccttgtc	Protospacer
********* ** *********** *  *

58. spacer 3.38|775652|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045419 (Pseudoalteromonas sp. THAF3 plasmid pTHAF3_a, complete sequence) position: , mismatch: 8, identity: 0.75

aggacagtatcagccaggtctggcgaatgtcc	CRISPR spacer
tccggcgtaccagccagggctggcgaatgtcc	Protospacer
   .  ***.******** *************

59. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

60. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

61. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

62. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

63. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

64. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

65. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

66. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

67. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

68. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

69. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

70. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

71. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcagac--aggtctttctgctgatcttcatactt	CRISPR spacer
--agatcatggcctttctgctgatcttcacaccc	Protospacer
  ***.   **.*****************.**..

72. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to NC_014663 (Acinetobacter phage Acj9, complete genome) position: , mismatch: 8, identity: 0.75

---tcagacaggtctttctgctgatcttcatactt	CRISPR spacer
gctttaaat---tctttctgttcatcttcatactt	Protospacer
   *.*.*.   ********.* ************

73. spacer 3.47|776201|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP016369 (Phaeobacter porticola strain P97 plasmid pP97_e, complete sequence) position: , mismatch: 8, identity: 0.75

agaacagcctctgcgacctcgggcggcattgc	CRISPR spacer
gttacagcctctgccacctcaggcggcgcagc	Protospacer
.  *********** *****.******.. **

74. spacer 3.51|776445|32|NC_007164|CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

gggcggttttggccggtgggtgccgggcgtgg	CRISPR spacer
catggtctttggccggttgttgccgggcgtgg	Protospacer
 .  * .********** * ************

75. spacer 3.56|776750|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP013927 (Alteromonas stellipolaris strain LMG 21861 plasmid pASTE61-200, complete sequence) position: , mismatch: 8, identity: 0.75

caccca-cagaggaagaatggcacaacctacaa	CRISPR spacer
-atttatcagaagatgaatggcacaacctatta	Protospacer
 *...* ****.** ***************. *

76. spacer 3.75|774249|33|NC_007164|PILER-CR matches to MK061410 (Gordonia phage Eyes, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgatc	Protospacer
* .*** ***.****************** ..

77. spacer 3.75|774249|33|NC_007164|PILER-CR matches to MK878901 (Gordonia phage HannahD, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
ggccacttcgtcaagggtggccgcgacgcgatc	Protospacer
*. *** ***.****************** ..

78. spacer 3.75|774249|33|NC_007164|PILER-CR matches to MK967377 (Gordonia phage MagicMan, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgatc	Protospacer
* .*** ***.****************** ..

79. spacer 3.75|774249|33|NC_007164|PILER-CR matches to KU998235 (Gordonia phage Bowser, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgatc	Protospacer
* .*** ***.****************** ..

80. spacer 3.75|774249|33|NC_007164|PILER-CR matches to MH479915 (Gordonia phage GEazy, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
ggccacttcgtcaagggtggccgcgacgcgatc	Protospacer
*. *** ***.****************** ..

81. spacer 3.75|774249|33|NC_007164|PILER-CR matches to NC_031255 (Gordonia phage Schwabeltier, complete genome) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
gcgcacttcgtcaagggtggccgcgacgcgatc	Protospacer
* .*** ***.****************** ..

82. spacer 3.75|774249|33|NC_007164|PILER-CR matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
aaacgcatcgccaagggcggccgcgagatctgg	Protospacer
.***.************.******** ..*  *

83. spacer 3.78|774432|33|NC_007164|PILER-CR matches to NZ_LR699555 (Paraburkholderia sp. Msb3 isolate PDMSB31 plasmid pI) position: , mismatch: 8, identity: 0.758

ggatgcagcccacgttgatattgatacgggcac	CRISPR spacer
ggaacgcgcccacgttgatattggtacaggcgt	Protospacer
***    ****************.***.***..

84. spacer 3.85|774859|33|NC_007164|PILER-CR matches to NC_017791 (Deinococcus gobiensis I-0 plasmid P2, complete sequence) position: , mismatch: 8, identity: 0.758

cgccgccgcaattcccccggtggtgttgagtcg	CRISPR spacer
cgccgccgcaactgccccggtggtggcgacgat	Protospacer
***********.* *********** .**

85. spacer 3.86|774920|33|NC_007164|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 8, identity: 0.758

aggttcaacgcggtctgcgccgcagtctgcgcc	CRISPR spacer
gtctgcgccgccgtctgcgccgccgtctgcgcc	Protospacer
.  * *. *** *********** *********

86. spacer 3.86|774920|33|NC_007164|PILER-CR matches to NZ_CP019237 (Rhodoferax koreense strain DCY-110 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

aggttca---acgcggtctgcgccgcagtctgcgcc	CRISPR spacer
---tccactcccgcggtcagcgccgctgtctgcgcg	Protospacer
   *.**    ******* ******* ********

87. spacer 3.89|776018|33|NC_007164|PILER-CR matches to NC_014663 (Acinetobacter phage Acj9, complete genome) position: , mismatch: 8, identity: 0.758

---tcagacaggtctttctgctgatcttcatacttc	CRISPR spacer
gctttaaat---tctttctgttcatcttcatacttc	Protospacer
   *.*.*.   ********.* *************

88. spacer 3.92|776201|33|NC_007164|PILER-CR matches to NZ_CP016369 (Phaeobacter porticola strain P97 plasmid pP97_e, complete sequence) position: , mismatch: 8, identity: 0.758

agaacagcctctgcgacctcgggcggcattgcc	CRISPR spacer
gttacagcctctgccacctcaggcggcgcagcc	Protospacer
.  *********** *****.******.. ***

89. spacer 3.5|773639|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 9, identity: 0.719

agcatcgttgtgcgtctgattcatgaaccctc	CRISPR spacer
cgacacgttgtgcgacggattcatgaacgaac	Protospacer
 *   ********* * ***********   *

90. spacer 3.12|774066|32|NC_007164|CRISPRCasFinder,CRT matches to KF692088 (Arthrobacter phage vB_ArS-ArV2, complete genome) position: , mismatch: 9, identity: 0.719

cgcacccgtttttgattggattggtgaaaagg	CRISPR spacer
tccacccgtttttgattgggttcgtcacgcgc	Protospacer
. *****************.** ** * . *

91. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP010630 (Phaeobacter inhibens strain P78 plasmid pP78_a, complete sequence) position: , mismatch: 9, identity: 0.719

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
tcaccatcatcggcggtaccggcatcgctatg	Protospacer
********* ******** **** . .  **

92. spacer 3.13|774127|32|NC_007164|CRISPRCasFinder,CRT matches to MN850623 (Escherichia phage sortsyn, complete genome) position: , mismatch: 9, identity: 0.719

tcaccatcaacggcggtaacggctcgaagatt	CRISPR spacer
gcaccattaagggcggtaacggctatatgcgc	Protospacer
 ******.** *************  * *  .

93. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP039905 (Agrobacterium tumefaciens strain CFBP6623 plasmid pAtCFBP6623a, complete sequence) position: , mismatch: 9, identity: 0.719

gaacacatcgccaagggtggccgcgacgccgc	CRISPR spacer
cgccgcatcgccaagggcgggcgcgacgtctg	Protospacer
 . *.************.** *******.*

94. spacer 3.15|774249|32|NC_007164|CRISPRCasFinder,CRT matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 9, identity: 0.719

gaacacatcgcca-------agggtggccgcgacgccgc	CRISPR spacer
-------ccgccaggcggccagggtggccgcgacgccga	Protospacer
       .*****       ******************

95. spacer 3.16|774310|32|NC_007164|CRISPRCasFinder,CRT matches to MK496050 (Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence) position: , mismatch: 9, identity: 0.719

accccacccccgccgttttggttctccctcgg	CRISPR spacer
ttcccaaccccgcccttttggttctcaaccac	Protospacer
 .**** ******* ***********  .*.

96. spacer 3.16|774310|32|NC_007164|CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

accccacccccgccgttttggttctccctcgg	CRISPR spacer
ttcccaaccccgcccttttggttctcaaccac	Protospacer
 .**** ******* ***********  .*.

97. spacer 3.24|774798|32|NC_007164|CRISPRCasFinder,CRT matches to AP013453 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-U-MedDCM-OCT-S28-C28) position: , mismatch: 9, identity: 0.719

tcaagcagaatcttctgcattgctaagctcct	CRISPR spacer
tttagctgcatcttctgcattgctaaaaaatt	Protospacer
*. *** * *****************.   .*

98. spacer 3.25|774859|32|NC_007164|CRISPRCasFinder,CRT matches to MN694402 (Marine virus AFVG_250M552, complete genome) position: , mismatch: 9, identity: 0.719

cgccgccgcaattcccccggtggtgttgagtc	CRISPR spacer
actctccgcaattaccccggtggtgctgatga	Protospacer
  .* ******** ***********.***

99. spacer 3.25|774859|32|NC_007164|CRISPRCasFinder,CRT matches to MN693651 (Marine virus AFVG_250M821, complete genome) position: , mismatch: 9, identity: 0.719

cgccgccgcaattcccccggtggtgttgagtc	CRISPR spacer
actctccgcaattaccccggtggtgctgatga	Protospacer
  .* ******** ***********.***

100. spacer 3.25|774859|32|NC_007164|CRISPRCasFinder,CRT matches to MN694091 (Marine virus AFVG_250M822, complete genome) position: , mismatch: 9, identity: 0.719

cgccgccgcaattcccccggtggtgttgagtc	CRISPR spacer
actctccgcaattaccccggtggtgctgatga	Protospacer
  .* ******** ***********.***

101. spacer 3.25|774859|32|NC_007164|CRISPRCasFinder,CRT matches to MN694562 (Marine virus AFVG_250M829, complete genome) position: , mismatch: 9, identity: 0.719

cgccgccgcaattcccccggtggtgttgagtc	CRISPR spacer
actctccgcaattaccccggtggtgctgatga	Protospacer
  .* ******** ***********.***

102. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
aacagcaacgcggtcggcgccgcggtctcccg	Protospacer
*.   ********** *******.**** *

103. spacer 3.28|775042|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.719

cggtcagacagcaacgcgggaatcttatcgcc	CRISPR spacer
cggtcagacagcaccgccggaatttcagaatg	Protospacer
************* *** *****.*.*  ..

104. spacer 3.29|775103|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP039697 (Novosphingobium sp. ABRDHK2 plasmid pABRDHK22, complete sequence) position: , mismatch: 9, identity: 0.719

tttaatctcgccatcgtggccgcgagctatta	CRISPR spacer
tggcatcccgccaccgtggccgcgagccgtcc	Protospacer
*   ***.*****.*************..*.

105. spacer 3.29|775103|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP005086 (Sphingobium sp. TKS plasmid pTK2, complete sequence) position: , mismatch: 9, identity: 0.719

tttaatctcgccatcgtggccgcgagctatta	CRISPR spacer
catgatctcgacatcgtagccgcgagcgcgca	Protospacer
. *.****** ******.*********   .*

106. spacer 3.31|775225|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010866 (Marinovum algicola DG 898 plasmid pMaD11, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcgcagcatagcgcagcgggcgggtccagg	CRISPR spacer
ccacgcaggatggcgcagcgggcgggatacgc	Protospacer
 *.***** **.************** .  *

107. spacer 3.37|775591|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 9, identity: 0.719

ggagttcgcgtctgatgctatggctggcctgt	CRISPR spacer
gagtttcgcgtttgacgctatggctggtgagg	Protospacer
*.. *******.***.***********.  *

108. spacer 3.38|775652|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT969521 (Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 2) position: , mismatch: 9, identity: 0.719

aggacagtatcagccaggtctggcgaatgtcc	CRISPR spacer
actcatttctcagccagttctggcgaatggcc	Protospacer
*      * ******** *********** **

109. spacer 3.38|775652|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032256 (Pseudomonas aeruginosa strain AR_0111 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aggacagtatcagccaggtctggcgaatgtcc	CRISPR spacer
actcatttctcagccagttctggcgaatggcc	Protospacer
*      * ******** *********** **

110. spacer 3.38|775652|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034355 (Pseudomonas aeruginosa strain IMP-13 plasmid pPYO_TB, complete sequence) position: , mismatch: 9, identity: 0.719

aggacagtatcagccaggtctggcgaatgtcc	CRISPR spacer
actcatttctcagccagttctggcgaatggcc	Protospacer
*      * ******** *********** **

111. spacer 3.40|775774|32|NC_007164|CRISPRCasFinder,CRT matches to MN033449 (Leviviridae sp. isolate H4_Rhizo_45_scaffold_1596 hypothetical protein (H4Rhizo451596_000001) gene, partial cds; and hypothetical protein (H4Rhizo451596_000002) and RNA-dependent RNA polymerase (H4Rhizo451596_000003) genes, complete cds) position: , mismatch: 9, identity: 0.719

cgtagccgatcaccgggtgtacctttgggcga	CRISPR spacer
accagccgatcaccgggtataccgttgctgaa	Protospacer
  .***************.**** ***   .*

112. spacer 3.43|775957|32|NC_007164|CRISPRCasFinder,CRT matches to NC_010933 (Bacillus cereus strain G9241 plasmid pBC210, complete sequence) position: , mismatch: 9, identity: 0.719

cgggcgtacctttgggcgacttggaaagacga	CRISPR spacer
aacgtttatctttgagcgacttggaaagatgg	Protospacer
 . *. **.*****.**************.*.

113. spacer 3.43|775957|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP009940 (Bacillus cereus strain 03BB87 plasmid pBCX01, complete sequence) position: , mismatch: 9, identity: 0.719

cgggcgtacctttgggcgacttggaaagacga	CRISPR spacer
aacgtttatctttgagcgacttggaaagatgg	Protospacer
 . *. **.*****.**************.*.

114. spacer 3.43|775957|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP009591 (Bacillus cereus G9241 plasmid pBC210, complete sequence) position: , mismatch: 9, identity: 0.719

cgggcgtacctttgggcgacttggaaagacga	CRISPR spacer
aacgtttatctttgagcgacttggaaagatgg	Protospacer
 . *. **.*****.**************.*.

115. spacer 3.46|776140|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP015095 (Pelagibaca abyssi strain JLT2014 plasmid pPABY4, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgttgctttacccaacgtctccgccaggtg	CRISPR spacer
gacgtcgcttttcccaacgtctccgtagtttg	Protospacer
 .***.***** *************. .  **

116. spacer 3.47|776201|32|NC_007164|CRISPRCasFinder,CRT matches to NC_042132 (Gordonia phage Sour, complete genome) position: , mismatch: 9, identity: 0.719

agaacagcctctgcgacctcgggcggcattgc	CRISPR spacer
cagctcacctcggcgacctcgggcggcatcgc	Protospacer
 .. . .**** *****************.**

117. spacer 3.47|776201|32|NC_007164|CRISPRCasFinder,CRT matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 9, identity: 0.719

agaacagcctctgcgacctcgggcggcattgc	CRISPR spacer
atctcagcctcggccacctcgggcggcacgat	Protospacer
*   ******* ** *************. ..

118. spacer 3.47|776201|32|NC_007164|CRISPRCasFinder,CRT matches to MT701598 (Streptomyces phage Sitrop, complete genome) position: , mismatch: 9, identity: 0.719

agaacagcctctgcgacctcgggcggcattgc	CRISPR spacer
atctcagcctcggccacctcgggcggcacgat	Protospacer
*   ******* ** *************. ..

119. spacer 3.49|776323|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 9, identity: 0.719

taggacatcagccccgtcagcttcacaacgga	CRISPR spacer
tcttacatcagctccgtcagcttgacatatta	Protospacer
*   ********.********** ***    *

120. spacer 3.53|776567|32|NC_007164|CRISPRCasFinder,CRT matches to NC_008342 (Nitrosomonas eutropha C91 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcagcctgcagcccggacgggatcggca	CRISPR spacer
ggaagcagccagcagcccggacgtgatcgtag	Protospacer
 .. ****** ************ *****  .

121. spacer 3.64|773578|33|NC_007164|PILER-CR matches to NZ_CP044217 (Mesorhizobium sp. NIBRBAC000500504 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

ctgacactggccaccccgccgcactcaaacacc	CRISPR spacer
agcacactggccaccccgccgcgcacaagggcg	Protospacer
   *******************.* ***. .*

122. spacer 3.67|773761|33|NC_007164|PILER-CR matches to MH807815 (Dickeya phage Luksen, complete genome) position: , mismatch: 9, identity: 0.727

atcttgccgatggactccttaaagcttttagcc	CRISPR spacer
tacgccccgatggactccttaaggctcttatca	Protospacer
  * . ****************.***.*** *

123. spacer 3.69|773883|33|NC_007164|PILER-CR matches to MH807815 (Dickeya phage Luksen, complete genome) position: , mismatch: 9, identity: 0.727

atcttgccgatggactccttaaagcttttagcc	CRISPR spacer
tacgccccgatggactccttaaggctcttatca	Protospacer
  * . ****************.***.*** *

124. spacer 3.75|774249|33|NC_007164|PILER-CR matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 9, identity: 0.727

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
gtcggcatcgccaagggcggcctcgacgcctac	Protospacer
*   .************.**** *******

125. spacer 3.75|774249|33|NC_007164|PILER-CR matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 9, identity: 0.727

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
ctccggctcgccaatggtggccgtgacgccgca	Protospacer
   *.  ******* ********.********.

126. spacer 3.75|774249|33|NC_007164|PILER-CR matches to NC_013531 (Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence) position: , mismatch: 9, identity: 0.727

gaacacatcgccaagggtggccgcgacgccgcg	CRISPR spacer
acgaactccgccaagggtgacggcgacgccgcc	Protospacer
. . ** .***********.* **********

127. spacer 3.92|776201|33|NC_007164|PILER-CR matches to NC_042132 (Gordonia phage Sour, complete genome) position: , mismatch: 9, identity: 0.727

agaacagcctctgcgacctcgggcggcattgcc	CRISPR spacer
cagctcacctcggcgacctcgggcggcatcgcc	Protospacer
 .. . .**** *****************.***

128. spacer 3.92|776201|33|NC_007164|PILER-CR matches to MT701598 (Streptomyces phage Sitrop, complete genome) position: , mismatch: 9, identity: 0.727

agaacagcctctgcgacctcgggcggcattgcc	CRISPR spacer
atctcagcctcggccacctcgggcggcacgatc	Protospacer
*   ******* ** *************. ..*

129. spacer 3.96|776445|33|NC_007164|PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 9, identity: 0.727

gggcggttttggccggtgggtgccgggcgtgga	CRISPR spacer
catggtctttggccggttgttgccgggcgtggc	Protospacer
 .  * .********** * ************

130. spacer 3.17|774371|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP017663 (Cronobacter sp. JZ38 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gcagccataacagtctgcgcagcagcggcaag	CRISPR spacer
ccatccataacagtctgcgcaccaattgagta	Protospacer
 ** ***************** **.. * . .

131. spacer 3.26|774920|32|NC_007164|CRISPRCasFinder,CRT matches to JQ680373 (Unidentified phage clone 2209_scaffold64 genomic sequence) position: , mismatch: 10, identity: 0.688

aggttcaacgcggtctgcgccgcagtctgcgc	CRISPR spacer
gtctgtgctgcggtctccgccgcactctgcgc	Protospacer
.  * .. .******* ******* *******

132. spacer 3.30|775164|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 10, identity: 0.688

tcttccttgacgttctcgttgcctgcgatcag	CRISPR spacer
aggatcttgacgttcgcgttgccggcgacctc	Protospacer
    .********** ******* ****.*

133. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to MK977696 (Gordonia phage SCentae, complete genome) position: , mismatch: 10, identity: 0.688

tcagacaggtctttctgctgatcttcatactt	CRISPR spacer
gggtgcagggctttccgctgatcttcatggtg	Protospacer
  . .**** *****.************. *

134. spacer 3.44|776018|32|NC_007164|CRISPRCasFinder,CRT matches to MK977695 (Gordonia phage Pupper, complete genome) position: , mismatch: 10, identity: 0.688

tcagacaggtctttctgctgatcttcatactt	CRISPR spacer
gggtgcagggctttccgctgatcttcatggtg	Protospacer
  . .**** *****.************. *

135. spacer 3.46|776140|32|NC_007164|CRISPRCasFinder,CRT matches to KC292027 (Halovirus HCTV-5, complete genome) position: , mismatch: 10, identity: 0.688

cgcgttgctttacccaacgtctccgccaggtg	CRISPR spacer
ggcgttgctgtacccagcgtctcctgtcgtca	Protospacer
 ******** ******.*******  . * ..

136. spacer 3.54|776628|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcagaatccgcgggcgatcttgagcgagacg	CRISPR spacer
cccgtcgcacgcggtcgatcttgagcgagccg	Protospacer
. *.  .. ***** ************** **

137. spacer 3.57|776811|32|NC_007164|CRISPRCasFinder,CRT matches to MN694701 (Marine virus AFVG_250M27, complete genome) position: , mismatch: 10, identity: 0.688

acaacaaagacgcacaacaaaacctcgtcggc	CRISPR spacer
gactcaacgaagcacaacaaaacctcgaccta	Protospacer
.   *** ** **************** *

138. spacer 3.58|776872|32|NC_007164|CRISPRCasFinder,CRT matches to NC_014839 (Pantoea sp. At-9b plasmid pPAT9B02, complete sequence) position: , mismatch: 10, identity: 0.688

acctgcggactcctccagcccgaaaccgaatt	CRISPR spacer
ctgtaaggactcctccagcccgtaagcgagcg	Protospacer
 . *. **************** ** ***..

139. spacer 3.58|776872|32|NC_007164|CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 10, identity: 0.688

acctgcggactcctccagcccgaaaccgaatt	CRISPR spacer
cgcagcggtctcctccggcccgaaacccgccg	Protospacer
  * **** *******.********** . .

140. spacer 3.76|774310|33|NC_007164|PILER-CR matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 10, identity: 0.697

accccacccccgccgttttggttctccctcggc	CRISPR spacer
ttcccaaccccgcccttttggttctcaaccacg	Protospacer
 .**** ******* ***********  .*.

141. spacer 3.76|774310|33|NC_007164|PILER-CR matches to MK496050 (Pseudomonas sp. strain FFUP_PS_41 plasmid pJBCL41, complete sequence) position: , mismatch: 10, identity: 0.697

accccacccccgccgttttggttctccctcggc	CRISPR spacer
ttcccaaccccgcccttttggttctcaaccacg	Protospacer
 .**** ******* ***********  .*.

142. spacer 3.85|774859|33|NC_007164|PILER-CR matches to MN693651 (Marine virus AFVG_250M821, complete genome) position: , mismatch: 10, identity: 0.697

cgccgccgcaattcccccggtggtgttgagtcg	CRISPR spacer
actctccgcaattaccccggtggtgctgatgac	Protospacer
  .* ******** ***********.***

143. spacer 3.85|774859|33|NC_007164|PILER-CR matches to MN694562 (Marine virus AFVG_250M829, complete genome) position: , mismatch: 10, identity: 0.697

cgccgccgcaattcccccggtggtgttgagtcg	CRISPR spacer
actctccgcaattaccccggtggtgctgatgac	Protospacer
  .* ******** ***********.***

144. spacer 3.85|774859|33|NC_007164|PILER-CR matches to MN694402 (Marine virus AFVG_250M552, complete genome) position: , mismatch: 10, identity: 0.697

cgccgccgcaattcccccggtggtgttgagtcg	CRISPR spacer
actctccgcaattaccccggtggtgctgatgac	Protospacer
  .* ******** ***********.***

145. spacer 3.85|774859|33|NC_007164|PILER-CR matches to MN694091 (Marine virus AFVG_250M822, complete genome) position: , mismatch: 10, identity: 0.697

cgccgccgcaattcccccggtggtgttgagtcg	CRISPR spacer
actctccgcaattaccccggtggtgctgatgac	Protospacer
  .* ******** ***********.***

146. spacer 3.86|774920|33|NC_007164|PILER-CR matches to JQ680373 (Unidentified phage clone 2209_scaffold64 genomic sequence) position: , mismatch: 10, identity: 0.697

aggttcaacgcggtctgcgccgcagtctgcgcc	CRISPR spacer
gtctgtgctgcggtctccgccgcactctgcgcc	Protospacer
.  * .. .******* ******* ********

147. spacer 3.92|776201|33|NC_007164|PILER-CR matches to MT711979 (Streptomyces phage Endor2, complete genome) position: , mismatch: 10, identity: 0.697

agaacagcctctgcgacctcgggcggcattgcc	CRISPR spacer
atctcagcctcggccacctcgggcggcacgatg	Protospacer
*   ******* ** *************. ..

148. spacer 3.98|776567|33|NC_007164|PILER-CR matches to NC_008342 (Nitrosomonas eutropha C91 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.697

tagtgcagcctgcagcccggacgggatcggcac	CRISPR spacer
ggaagcagccagcagcccggacgtgatcgtaga	Protospacer
 .. ****** ************ *****  .

149. spacer 3.99|776628|33|NC_007164|PILER-CR matches to NZ_CP030354 (Novosphingobium sp. P6W plasmid pP6W1, complete sequence) position: , mismatch: 10, identity: 0.697

tgcagaatccgcgggcgatcttgagcgagacgc	CRISPR spacer
cccgtcgcacgcggtcgatcttgagcgagccgc	Protospacer
. *.  .. ***** ************** ***

150. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
gatggccacagcgtgccgggcgcccgcctgga	Protospacer
. .. *** ************* ***** . .

151. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to MN183283 (Arthrobacter phage BossLady, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

152. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to MF189176 (Arthrobacter phage Jordan, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

153. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to MF189178 (Arthrobacter phage Shade, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

154. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to KU160668 (Arthrobacter phage TaeYoung, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

155. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to MT114161 (Arthrobacter phage JKerns, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

156. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to NC_041933 (Arthrobacter phage Sonny, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

157. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to NC_049468 (Arthrobacter phage Zartrosa, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

158. spacer 3.11|774005|32|NC_007164|CRISPRCasFinder,CRT matches to KU160656 (Arthrobacter phage Martha, complete genome) position: , mismatch: 11, identity: 0.656

atcacccagagcgtgccgggcgaccgccgatg	CRISPR spacer
ccgggccagagccagccgggcgaccgccagaa	Protospacer
 . . *******  **************.. .

159. spacer 3.33|775347|32|NC_007164|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048110 (Klebsiella michiganensis strain BD177 plasmid unnamed2) position: , mismatch: 11, identity: 0.656

ccaggcagaatctcgcacaccaccggcgcatc	CRISPR spacer
tagtccagaatgtcgcccaccaccggcgacga	Protospacer
. .  ****** **** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18227 : 70494

Staphylococcus_phage(16.67%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272785.1\|18227_18362_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_011272786.1\|18525_20427_-	hypothetical protein	NA	NA	NA	NA
WP_158306306.1\|20790_22134_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-29	29.7
WP_011272788.1\|22210_23395_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_005292595.1\|23415_23805_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_005292598.1\|23867_24443_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005292602.1\|24439_24802_+	DoxX family protein	NA	NA	NA	NA
WP_005292604.1\|24890_25133_+	hypothetical protein	NA	NA	NA	NA
WP_158306307.1\|25619_26963_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.5e-29	29.4
WP_011272790.1\|26972_27221_-	antitoxin VbhA family protein	NA	NA	NA	NA
WP_011272791.1\|27413_29126_-	redoxin domain-containing protein	NA	NA	NA	NA
WP_115737357.1\|29356_29737_+	hypothetical protein	NA	NA	NA	NA
WP_011272793.1\|29771_30368_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_011272794.1\|30364_31132_+	anti-sigma factor	NA	NA	NA	NA
WP_005292620.1\|31296_31557_+	hypothetical protein	NA	NA	NA	NA
WP_011272795.1\|31572_33492_+	alpha/beta-hydrolase family protein	NA	NA	NA	NA
WP_049780525.1\|33501_34146_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011272797.1\|34416_35808_+	putative DNA binding domain-containing protein	A0A088F7M4	Mycobacterium_phage	3.9e-109	47.8
WP_041625999.1\|35909_37472_-	anthranilate synthase component I family protein	S4VT78	Pandoravirus	9.2e-67	35.1
WP_011272799.1\|37512_38988_-	hypothetical protein	NA	NA	NA	NA
WP_172457297.1\|39138_39669_+	peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	3.7e-20	42.0
WP_041626243.1\|39757_40402_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_005292638.1\|40428_40701_-	cell division protein CrgA	NA	NA	NA	NA
WP_011272801.1\|40840_41569_+	glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	3.8e-39	42.5
WP_011272802.1\|41594_43763_-	Stk1 family PASTA domain-containing Ser/Thr kinase	Q85650	Moloney_murine_sarcoma_virus	4.1e-17	29.3
WP_011272803.1\|43920_45543_-	serine/threonine protein kinase	A0A2P1EMR8	Moumouvirus	5.7e-19	29.5
WP_005292645.1\|45546_46995_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_005292648.1\|46991_48299_-	FtsW/RodA/SpoVE family cell cycle protein	NA	NA	NA	NA
WP_011272804.1\|48302_49874_-	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_011272805.1\|49870_50368_-	FHA domain-containing protein	NA	NA	NA	NA
WP_011272806.1\|50547_51828_-	DUF3662 and FHA domain-containing protein	NA	NA	NA	NA
WP_005323424.1\|52424_53603_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_080561525.1\|53887_54811_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.3e-15	34.7
WP_011272808.1\|54877_55480_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_005292659.1\|55472_56441_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_011272809.1\|56525_57029_+	FBP domain-containing protein	NA	NA	NA	NA
WP_011272810.1\|57189_57333_+	hypothetical protein	NA	NA	NA	NA
WP_005292666.1\|57425_58007_+	hypothetical protein	NA	NA	NA	NA
WP_005292669.1\|58287_58638_+	transglycosylase family protein	A0A1I9SA30	Rhodococcus_phage	4.2e-28	79.2
WP_011272811.1\|58679_59447_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_005292672.1\|59606_60401_+	HNH endonuclease	NA	NA	NA	NA
WP_011272812.1\|60408_61050_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_005292675.1\|61218_62382_+	cystathionine gamma-synthase	A0A0B5JD48	Pandoravirus	3.0e-22	29.6
WP_011272813.1\|62394_62811_+	hypothetical protein	NA	NA	NA	NA
WP_011272814.1\|62815_63880_-	hypothetical protein	NA	NA	NA	NA
WP_011272815.1\|64087_65113_-	hypothetical protein	NA	NA	NA	NA
WP_011272816.1\|65258_66065_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005292686.1\|66127_66445_-	YbjQ family protein	NA	NA	NA	NA
WP_011113078.1\|69255_70494_-\|transposase	IS256-like element IS3506 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-82	41.9

DBSCAN-SWA_2

406542 : 462494

Bacillus_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011113078.1\|406542_407781_+\|transposase	IS256-like element IS3506 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-82	41.9
WP_034966414.1\|407958_408402_+	hypothetical protein	NA	NA	NA	NA
WP_011273050.1\|408450_408960_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011273051.1\|409089_409767_-	L,D-transpeptidase	NA	NA	NA	NA
WP_005296686.1\|410006_410714_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-31	35.6
WP_011273053.1\|410726_412337_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.1e-26	29.1
WP_011273054.1\|412481_413693_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011273055.1\|413947_415102_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_011273056.1\|415225_415663_-	HIT family protein	NA	NA	NA	NA
WP_011273057.1\|415727_416984_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_034986177.1\|417130_418435_+	ATPase	NA	NA	NA	NA
WP_011273059.1\|418427_419087_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_011273060.1\|419116_420547_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.1e-05	28.2
WP_034986103.1\|420658_421552_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	2.1e-44	38.8
WP_011273062.1\|421602_423837_+	S9 family peptidase	A0A1V0SHT0	Klosneuvirus	9.5e-25	22.5
WP_011273063.1\|423922_424657_+	DUF2334 domain-containing protein	NA	NA	NA	NA
WP_011273064.1\|424737_424992_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_011273065.1\|424992_425664_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_041626063.1\|425695_428137_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	8.0e-235	55.0
WP_011273067.1\|428221_429253_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_011273068.1\|429366_429747_+	hypothetical protein	NA	NA	NA	NA
WP_011273069.1\|429846_431334_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	3.6e-44	30.2
WP_011273070.1\|431330_432425_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	7.6e-60	40.5
WP_005323424.1\|432515_433694_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_005323423.1\|433896_435438_+	tetracycline efflux ABC transporter TetAB subunit A	W8CYL7	Bacillus_phage	3.1e-06	20.3
WP_011273071.1\|435438_437244_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.1e-06	25.7
WP_005296323.1\|437265_437799_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_005296320.1\|437809_438166_+	hypothetical protein	NA	NA	NA	NA
WP_005296318.1\|438162_439245_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_005323421.1\|439255_440326_-	hypothetical protein	NA	NA	NA	NA
WP_005296312.1\|440378_441224_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_005296309.1\|441240_442455_+	cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	A0A2K9L6B7	Tupanvirus	2.1e-34	35.3
WP_005296305.1\|442478_442877_+	hypothetical protein	NA	NA	NA	NA
WP_049780480.1\|442899_443181_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_005323424.1\|443151_444330_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_011273073.1\|444592_444850_-	DUF3073 domain-containing protein	NA	NA	NA	NA
WP_011273074.1\|445073_446348_-	folate-binding protein YgfZ	NA	NA	NA	NA
WP_034975932.1\|446390_447302_+	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_011273076.1\|447330_447972_-	FABP family protein	NA	NA	NA	NA
WP_011273077.1\|447982_448801_-	DUF2993 domain-containing protein	NA	NA	NA	NA
WP_011273078.1\|448965_450003_+	mycothiol synthase	NA	NA	NA	NA
WP_035009612.1\|450431_451523_+	phosphate ABC transporter substrate-binding protein PstS	E3SNT9	Prochlorococcus_phage	2.5e-18	30.8
WP_005296625.1\|451675_452737_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_005296621.1\|452749_453670_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_005296618.1\|453742_454519_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-17	33.0
WP_011273080.1\|454706_455258_+	AAA family ATPase	NA	NA	NA	NA
WP_011273081.1\|455268_456009_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_080561489.1\|456094_457348_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_011273083.1\|457523_459029_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_005296600.1\|459393_459687_+	hypothetical protein	NA	NA	NA	NA
WP_005323424.1\|460087_461266_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_011272845.1\|462176_462494_+\|transposase	transposase	A0A2P1JR43	Mycobacterium_phage	3.2e-11	43.5

DBSCAN-SWA_3

557062 : 669130

Corynebacterium_phage(13.64%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011113078.1\|557062_558301_+\|transposase	IS256-like element IS3506 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-82	41.9
WP_158306310.1\|558716_562379_+	Cna B-type domain-containing protein	NA	NA	NA	NA
WP_011273141.1\|562529_565253_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_011273142.1\|565276_566632_+	TRAP transporter large permease subunit	NA	NA	NA	NA
WP_041626294.1\|566691_567993_-	metallophosphoesterase	NA	NA	NA	NA
WP_011273144.1\|568344_570018_-	AMP-binding protein	NA	NA	NA	NA
WP_011273145.1\|570093_570477_+	hypothetical protein	NA	NA	NA	NA
WP_011273146.1\|570513_571959_-	alanine:cation symporter family protein	NA	NA	NA	NA
WP_011273147.1\|572164_573820_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_011273148.1\|573935_574682_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_005323424.1\|575063_576242_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_049780483.1\|577910_578480_+	vitamin K epoxide reductase family protein	NA	NA	NA	NA
WP_011273152.1\|578499_579450_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	8.6e-76	52.2
WP_005511141.1\|579636_579759_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_011273153.1\|580146_580377_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	5.2e-19	60.5
WP_011273154.1\|580452_580896_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	6.9e-12	35.8
WP_011273155.1\|581055_583218_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	7.1e-211	51.9
WP_011273156.1\|583339_583828_-	ferritin	NA	NA	NA	NA
WP_011273157.1\|584169_585165_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A160DHK0	Gordonia_phage	1.2e-141	77.2
WP_011273158.1\|585404_587102_+	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_011273159.1\|587632_588844_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011273160.1\|589212_590595_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_011273161.1\|590627_592205_-	AMP-binding protein	Q75ZG1	Hepacivirus	2.8e-63	40.6
WP_005294149.1\|592527_593073_+	hypothetical protein	NA	NA	NA	NA
WP_005294145.1\|593086_593662_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_005294142.1\|593793_595890_-	Hsp70 family protein	A0A159KIK0	Grapevine_leafroll-associated_virus	1.1e-09	31.0
WP_005294140.1\|595974_597447_-	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_005294137.1\|597447_599229_-	dynamin family protein	NA	NA	NA	NA
WP_011273164.1\|599643_600909_+	hypothetical protein	NA	NA	NA	NA
WP_011273165.1\|600920_602963_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	1.1e-64	29.2
WP_005294128.1\|602999_604325_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.7e-48	32.5
WP_011273166.1\|604388_604694_+\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_011273167.1\|604721_605291_+	DUF2017 domain-containing protein	NA	NA	NA	NA
WP_011273168.1\|605290_606469_+	P1 family peptidase	NA	NA	NA	NA
WP_173362252.1\|606526_607342_+	glutamate racemase	NA	NA	NA	NA
WP_011273170.1\|607716_608526_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011273171.1\|608603_609374_+	ribonuclease PH	NA	NA	NA	NA
WP_011273172.1\|609415_610069_+	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_011273173.1\|610247_611642_+	amidohydrolase	NA	NA	NA	NA
WP_011273174.1\|611648_612014_-	DUF3817 domain-containing protein	NA	NA	NA	NA
WP_011273175.1\|612017_612461_-	hypothetical protein	NA	NA	NA	NA
WP_011273176.1\|612727_613219_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_011273177.1\|613307_613586_+	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_115737546.1\|613677_614802_+	AbrB family transcriptional regulator	NA	NA	NA	NA
WP_049780537.1\|614851_615883_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_011273180.1\|616491_616782_-	hypothetical protein	NA	NA	NA	NA
WP_005297400.1\|617023_618373_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_173362235.1\|618962_620197_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-60	48.5
WP_080561494.1\|620195_620435_+	hypothetical protein	NA	NA	NA	NA
WP_005323424.1\|620405_621584_-\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_080561495.1\|622366_623587_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_115737493.1\|623619_624612_-	squalene/phytoene synthase family protein	NA	NA	NA	NA
WP_011273185.1\|624969_625188_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_011273186.1\|625198_625702_-	flavin reductase	NA	NA	NA	NA
WP_011273187.1\|625884_626517_-	oligoribonuclease	A0A1B3B0T8	Gordonia_phage	1.2e-17	32.3
WP_011273188.1\|626574_627378_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011273189.1\|627537_628305_+	hypothetical protein	NA	NA	NA	NA
WP_011273190.1\|628351_628681_-	hypothetical protein	NA	NA	NA	NA
WP_011273191.1\|628950_630162_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_034978173.1\|630600_631911_-	nucleotidyltransferase	NA	NA	NA	NA
WP_115737492.1\|631895_632468_-	SLATT domain-containing protein	NA	NA	NA	NA
WP_011273194.1\|632517_635112_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_080561496.1\|635114_637067_-	site-specific DNA-methyltransferase	A0A220NUF4	Escherichia_phage	7.7e-39	32.4
WP_155272463.1\|637145_637313_+	hypothetical protein	NA	NA	NA	NA
WP_011273196.1\|638071_639295_+	hypothetical protein	NA	NA	NA	NA
WP_147292237.1\|639896_640580_+	hypothetical protein	NA	NA	NA	NA
WP_080561497.1\|640512_641361_-	TIGR02391 family protein	NA	NA	NA	NA
WP_011273198.1\|641671_642859_+\|transposase	IS481-like element IS3514 family transposase	NA	NA	NA	NA
WP_011273116.1\|643142_644360_+\|transposase	IS481-like element ISCje1 family transposase	NA	NA	NA	NA
WP_011113078.1\|644640_645879_+\|transposase	IS256-like element IS3506 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-82	41.9
WP_011273199.1\|646094_648413_+	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_011273200.1\|648632_649148_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_005296530.1\|649314_650985_+	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	4.1e-49	28.9
WP_005296528.1\|651138_651621_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_011273201.1\|651729_652458_+	hypothetical protein	NA	NA	NA	NA
WP_011273202.1\|652499_653294_-	TSUP family transporter	NA	NA	NA	NA
WP_080561526.1\|653296_653686_-	globin	NA	NA	NA	NA
WP_011273204.1\|653788_656467_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	7.1e-43	34.2
WP_041626308.1\|656569_657184_+	DSBA oxidoreductase	NA	NA	NA	NA
WP_005296514.1\|657251_657725_+	ribose-5-phosphate isomerase	NA	NA	NA	NA
WP_041626097.1\|657759_657996_-	hypothetical protein	A0A1W6JRB8	Corynebacterium_phage	5.9e-10	43.2
WP_011273207.1\|658707_660288_+	trigger factor	NA	NA	NA	NA
WP_011273208.1\|660495_661062_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	5.3e-41	48.0
WP_011273209.1\|661065_661695_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.2e-39	46.4
WP_011273210.1\|661835_663110_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-134	57.6
WP_041626099.1\|663106_663919_-	hypothetical protein	NA	NA	NA	NA
WP_011273212.1\|664103_665096_+	malate dehydrogenase	NA	NA	NA	NA
WP_115737544.1\|665275_666274_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_011273214.1\|666331_669130_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	4.0e-145	39.0

DBSCAN-SWA_4

1385411 : 1510142

uncultured_virus(15.38%)

holin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005295308.1\|1385411_1387589_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	4.5e-19	26.6
WP_172457310.1\|1387595_1389176_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_011273707.1\|1389220_1391422_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	1.4e-17	26.7
WP_005295313.1\|1391666_1393451_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	3.4e-57	28.4
WP_011273708.1\|1393454_1394303_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_005295319.1\|1394305_1394869_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_011273709.1\|1394872_1396216_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_011273710.1\|1396480_1396999_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_011273711.1\|1397213_1401308_-	hypothetical protein	NA	NA	NA	NA
WP_011273712.1\|1401358_1402957_-	signal recognition particle protein	NA	NA	NA	NA
WP_011273713.1\|1403072_1403411_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_115737533.1\|1403407_1404745_-	ammonium transporter	NA	NA	NA	NA
WP_011273715.1\|1404994_1406476_-	signal recognition particle-docking protein FtsY	D6PHS7	uncultured_phage	7.2e-13	38.8
WP_011273716.1\|1406590_1407886_+	membrane protein	NA	NA	NA	NA
WP_011273717.1\|1407854_1411103_-\|tRNA	bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	A0A2K9KZX5	Tupanvirus	5.9e-60	33.3
WP_041626364.1\|1411125_1414701_-	hypothetical protein	NA	NA	NA	NA
WP_011273719.1\|1414782_1418271_-	chromosome segregation protein SMC	NA	NA	NA	NA
WP_011273720.1\|1418299_1418701_-	GtrA family protein	NA	NA	NA	NA
WP_011273721.1\|1418708_1420184_-	alanine:cation symporter family protein	NA	NA	NA	NA
WP_011273722.1\|1420282_1421149_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	A0A127AWE5	Bacillus_phage	2.7e-20	26.7
WP_011273723.1\|1421141_1421876_-	ribonuclease III	A0A2K9R4Y7	Dishui_lake_phycodnavirus	1.4e-20	33.5
WP_011273724.1\|1421900_1422443_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_011273725.1\|1422461_1423217_-	DivIVA domain-containing protein	NA	NA	NA	NA
WP_005295363.1\|1423276_1423762_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	7.1e-18	31.6
WP_011273726.1\|1423772_1424342_-	RsmD family RNA methyltransferase	NA	NA	NA	NA
WP_011273727.1\|1424419_1424632_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_011273728.1\|1424672_1426838_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_011273729.1\|1426841_1428377_-	DAK2 domain-containing protein	NA	NA	NA	NA
WP_011273730.1\|1428454_1429153_-	uracil-DNA glycosylase	U5NM17	Retroperitoneal_fibromatosis-associated_herpesvirus	2.7e-26	38.5
WP_011273731.1\|1429162_1430161_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_011273732.1\|1430222_1431323_+	DUF3515 domain-containing protein	NA	NA	NA	NA
WP_011273733.1\|1431975_1433097_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_011273734.1\|1433176_1434175_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_049780504.1\|1434349_1435333_+	NUDIX hydrolase	NA	NA	NA	NA
WP_011273736.1\|1435336_1435933_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_011273737.1\|1436043_1437465_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_005295396.1\|1437523_1438258_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_005295398.1\|1438420_1438699_-	hypothetical protein	NA	NA	NA	NA
WP_005295400.1\|1438822_1439515_+	DUF1707 domain-containing protein	NA	NA	NA	NA
WP_005323424.1\|1441572_1442751_+\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_080561494.1\|1442721_1442961_-	hypothetical protein	NA	NA	NA	NA
WP_173362235.1\|1442959_1444193_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-60	48.5
WP_005297400.1\|1445284_1446634_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_115597273.1\|1447100_1448326_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.8e-68	53.3
WP_011273740.1\|1448451_1449723_-	DUF3578 domain-containing protein	NA	NA	NA	NA
WP_011273743.1\|1451114_1451792_-	CAP domain-containing protein	NA	NA	NA	NA
WP_034965020.1\|1452073_1452973_+	restriction endonuclease	NA	NA	NA	NA
WP_005295424.1\|1453306_1455322_+	site-specific DNA-methyltransferase	A0A220NUF4	Escherichia_phage	6.5e-41	31.1
WP_005295426.1\|1455324_1457901_+	DEAD/DEAH box helicase family protein	A0A088F7C5	Idiomarinaceae_phage	3.5e-07	22.6
WP_005295428.1\|1458020_1459112_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_011273745.1\|1459142_1460672_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.9e-72	36.2
WP_005323424.1\|1460985_1462164_+\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_011273748.1\|1463908_1465252_-	hypothetical protein	NA	NA	NA	NA
WP_011273750.1\|1466340_1467438_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_041626163.1\|1467434_1469084_-	AAA family ATPase	NA	NA	NA	NA
WP_041626366.1\|1469107_1469851_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_011273753.1\|1469837_1472924_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	7.4e-60	29.3
WP_011273754.1\|1472920_1473661_-	TIGR02391 family protein	NA	NA	NA	NA
WP_011273755.1\|1473657_1474881_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_173362238.1\|1474877_1477331_-	N-6 DNA methylase	A0A2H4PQP4	Staphylococcus_phage	4.8e-78	38.0
WP_011273191.1\|1478043_1479255_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011273759.1\|1479690_1480380_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.7e-31	43.8
WP_005297400.1\|1480480_1481830_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_011113080.1\|1482386_1483307_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.9e-60	48.5
WP_005297400.1\|1483569_1484919_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_115737402.1\|1485986_1486253_+\|transposase	transposase	Q6H9S3	Enterobacteria_phage	2.1e-11	45.2
WP_173362260.1\|1486669_1487242_-	HD domain-containing protein	NA	NA	NA	NA
WP_011273765.1\|1487258_1488428_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_011273766.1\|1488484_1490863_+	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	3.7e-19	47.7
WP_034988238.1\|1491059_1491152_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
WP_011273767.1\|1491148_1492801_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_011273768.1\|1492797_1495014_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	8.5e-26	25.4
WP_011273769.1\|1495066_1495660_+	K(+)-transporting ATPase subunit C	NA	NA	NA	NA
WP_011273770.1\|1495803_1498500_+	sensor histidine kinase KdpD	NA	NA	NA	NA
WP_011273771.1\|1498496_1499189_+	response regulator transcription factor	NA	NA	NA	NA
WP_115737532.1\|1499692_1501921_+	esterase-like activity of phytase family protein	E3SJA5	Synechococcus_phage	7.4e-70	38.8
WP_011273773.1\|1502009_1502603_+	Type 1 glutamine amidotransferase-like domain-containing protein	NA	NA	NA	NA
WP_115737531.1\|1502969_1503842_+	hypothetical protein	NA	NA	NA	NA
WP_158306312.1\|1503838_1503976_-	hypothetical protein	NA	NA	NA	NA
WP_005297400.1\|1504047_1505397_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_011018353.1\|1505583_1506768_+\|transposase	IS256-like element IS3503 family transposase	NA	NA	NA	NA
WP_005323424.1\|1506960_1508139_+\|transposase	IS256-like element IS1249 family transposase	NA	NA	NA	NA
WP_011273776.1\|1508639_1510142_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_5

1601171 : 1666943

Staphylococcus_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041626385.1\|1601171_1602842_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
WP_158306307.1\|1603158_1604502_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.5e-29	29.4
WP_011273833.1\|1604822_1606046_-\|transposase	IS481-like element IS3514 family transposase	NA	NA	NA	NA
WP_011273834.1\|1606211_1606850_-	hypothetical protein	NA	NA	NA	NA
WP_011273835.1\|1606965_1607487_+	hypothetical protein	NA	NA	NA	NA
WP_011273836.1\|1607483_1610264_-	AAA family ATPase	NA	NA	NA	NA
WP_049780511.1\|1610284_1611541_-	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_011273838.1\|1611556_1612567_-	SWIM zinc finger family protein	NA	NA	NA	NA
WP_041626173.1\|1612559_1615649_-	DEAD/DEAH box helicase	D9ZNF7	Clostridium_phage	7.2e-31	26.9
WP_011273840.1\|1615815_1617402_+	sodium/proline symporter PutP	NA	NA	NA	NA
WP_011273841.1\|1617455_1618109_+	HNH endonuclease	NA	NA	NA	NA
WP_011273842.1\|1618164_1618650_+	hypothetical protein	NA	NA	NA	NA
WP_011273843.1\|1618739_1620881_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.5e-61	37.0
WP_011273844.1\|1620988_1622323_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_041626175.1\|1622749_1623136_+	hypothetical protein	NA	NA	NA	NA
WP_005293055.1\|1623181_1623991_-	hypothetical protein	NA	NA	NA	NA
WP_005293058.1\|1624117_1625632_-	carboxylesterase/lipase family protein	NA	NA	NA	NA
WP_011273846.1\|1625712_1626486_+	hypothetical protein	NA	NA	NA	NA
WP_173362241.1\|1626526_1629979_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.5e-16	24.3
WP_011273848.1\|1630032_1633752_+	multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA	NA	NA	NA
WP_041626177.1\|1633973_1634612_-	hypothetical protein	NA	NA	NA	NA
WP_011273850.1\|1634674_1636003_+	magnesium transporter	NA	NA	NA	NA
WP_005293072.1\|1636010_1636547_+	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_005293075.1\|1636612_1637743_+	Mrp/NBP35 family ATP-binding protein	NA	NA	NA	NA
WP_005293079.1\|1637752_1638340_-	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_005293082.1\|1638376_1638745_-	hypothetical protein	NA	NA	NA	NA
WP_005293085.1\|1638837_1639428_-	RNA polymerase sigma factor SigE	NA	NA	NA	NA
WP_005293087.1\|1639627_1640308_+	methyltransferase	NA	NA	NA	NA
WP_011273851.1\|1640465_1641650_+\|transposase	IS256-like element IS3509 family transposase	NA	NA	NA	NA
WP_005293089.1\|1641792_1643010_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
WP_005293091.1\|1643167_1644352_+	glycogen synthase	NA	NA	NA	NA
WP_011273853.1\|1644379_1645945_+	GH32 C-terminal domain-containing protein	NA	NA	NA	NA
WP_005293095.1\|1645988_1646864_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_005293097.1\|1647008_1648487_-	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	3.4e-39	34.6
WP_005293100.1\|1648490_1648856_-	DivIVA domain-containing protein	NA	NA	NA	NA
WP_011273854.1\|1648952_1649810_-	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	3.8e-22	32.4
WP_005293104.1\|1649974_1651123_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_011273855.1\|1651263_1652727_+	amino acid permease	NA	NA	NA	NA
WP_011273856.1\|1652756_1653764_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_011273857.1\|1653791_1654667_-	pseudouridylate synthase	NA	NA	NA	NA
WP_011273858.1\|1654745_1655882_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_011273859.1\|1655959_1656277_-	ferredoxin family protein	NA	NA	NA	NA
WP_011273860.1\|1656346_1656841_-	hypothetical protein	NA	NA	NA	NA
WP_011273861.1\|1656871_1657873_-	N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase	NA	NA	NA	NA
WP_011273862.1\|1657876_1659622_-	ABC transporter family substrate-binding protein	NA	NA	NA	NA
WP_011273863.1\|1659705_1661622_-	translational GTPase TypA	NA	NA	NA	NA
WP_115737526.1\|1661948_1662617_+	hypothetical protein	NA	NA	NA	NA
WP_005293128.1\|1662769_1663228_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_005293134.1\|1663334_1663622_+\|transposase	transposase	NA	NA	NA	NA
WP_011273865.1\|1663675_1664539_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.3e-32	34.4
WP_011113070.1\|1664703_1664757_+	chloramphenicol resistance leader peptide	NA	NA	NA	NA
WP_011113071.1\|1664778_1665954_+	chloramphenicol efflux MFS transporter Cmx	NA	NA	NA	NA
WP_011273866.1\|1665953_1666943_+\|transposase	IS481-like element IS5564 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1842193 : 1861844

uncultured_Caudovirales_phage(25.0%)

transposase,integrase,protease

attL 1840001:1840015|attR 1851737:1851751

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1840001:1840015	attL	NA	NA	NA	NA
WP_005293752.1\|1842193_1843315_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_005293753.1\|1843328_1843772_+	DUF1990 domain-containing protein	NA	NA	NA	NA
WP_005293756.1\|1843819_1844824_-	DUF1963 domain-containing protein	NA	NA	NA	NA
WP_005293758.1\|1845003_1845534_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_005293765.1\|1845736_1846099_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA
WP_005293767.1\|1846079_1847690_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_011273980.1\|1847727_1848204_+	hypothetical protein	NA	NA	NA	NA
WP_005293768.1\|1848373_1849933_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	4.5e-114	50.9
WP_005293770.1\|1850102_1850507_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_011113078.1\|1851224_1852463_-\|transposase	IS256-like element IS3506 family transposase	A0A220NQR7	Corynebacterium_phage	1.6e-82	41.9
1851737:1851751	attR	NA	NA	NA	NA
WP_011273981.1\|1853054_1853744_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_005297400.1\|1857731_1859081_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.2e-36	37.1
WP_005297392.1\|1859119_1860328_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_115737392.1\|1860610_1861844_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-60	48.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NC_007164

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection