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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR216067 Streptococcus pneumoniae isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8 genome assembly, chromosome: 1 1 crisprs DEDDh,cas3,DinG,RT 0 0 15 0

Results visualization

1. LR216067
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR216067_1 91261-91356 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1590 : 49295 46 uncultured_virus(11.11%) transposase,bacteriocin,tRNA,protease NA
DBSCAN-SWA_2 99882 : 190636 100 Streptococcus_phage(40.91%) tRNA,integrase,bacteriocin,transposase,protease attL 180624:180648|attR 193623:193647
DBSCAN-SWA_3 313822 : 409695 91 Streptococcus_phage(17.65%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_4 444919 : 547921 103 Bacillus_phage(22.22%) tRNA,integrase,bacteriocin,transposase,protease attL 480020:480079|attR 559012:559045
DBSCAN-SWA_5 588899 : 632318 30 Staphylococcus_prophage(28.57%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_6 748181 : 795043 46 Mycobacterium_phage(16.67%) transposase,integrase,protease attL 792642:792701|attR 795047:795589
DBSCAN-SWA_7 811190 : 848669 43 Streptococcus_phage(57.14%) transposase,tRNA,protease,holin NA
DBSCAN-SWA_8 1014566 : 1121629 110 Bacillus_phage(21.74%) transposase,protease,holin NA
DBSCAN-SWA_9 1137054 : 1190728 57 Bacillus_virus(20.0%) transposase,tRNA,holin NA
DBSCAN-SWA_10 1199253 : 1205032 9 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_11 1212933 : 1247997 36 Staphylococcus_phage(16.67%) transposase,bacteriocin,tRNA NA
DBSCAN-SWA_12 1298166 : 1345020 52 Streptococcus_phage(31.58%) transposase,integrase,tRNA,protease attL 1288920:1288936|attR 1356342:1356358
DBSCAN-SWA_13 1565655 : 1601525 39 Streptococcus_phage(21.43%) transposase,integrase,holin attL 1600757:1600771|attR 1602530:1602544
DBSCAN-SWA_14 1690017 : 1797700 108 Bacillus_phage(17.86%) transposase,tRNA,bacteriocin,protease NA
DBSCAN-SWA_15 2057001 : 2065755 9 Streptococcus_phage(33.33%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage