CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR216053	Streptococcus pneumoniae strain 2245STDY6106635 genome assembly, chromosome: 1	3 crisprs	DEDDh,PrimPol,DinG,cas3,RT	0	1	18	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR216053_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR216053_1

15648-15727

Unclear

Consensus_repeat	Method
TGGAATTTACTTAGAAAATAAAAAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of LR216053_1

>merge|LR216053|1|15648-15727|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAATAGTTGATTTAACAACGTTTTTAGCCTACTTGGAATTTACTTGGAAAATAAAAAA

>LR216053|1|1|15648-15727|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAA	TAGTTGATTTAACAACGTTTTTAGCCTACT
TGGAATTTACTTGGAAAATAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
LR216053.1\|VFI18400.1\|11777_12206_-\|phage-protein	unknown	unknown	unknown
LR216053.1\|VFI18442.1\|16643_17498_+\|DNA-damage-inducible-protein-D	unknown	unknown	gnl\|CDD\|183178
LR216053.1\|VFI18435.1\|14677_15418_+\|bifunctional-S24-family-peptidase/transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
LR216053.1\|VFI18449.1\|17662_18829_+\|integrase	unknown	unknown	gnl\|CDD\|271189
LR216053.1\|VFI18470.1\|20704_24214_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
LR216053.1\|VFI18386.1\|11491_11641_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI18456.1\|18948_20064_+\|GTP-dependent-nucleic-acid-binding-protein-EngD	unknown	unknown	gnl\|CDD\|236583
LR216053.1\|VFI18379.1\|11117_11234_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI18414.1\|12805_13432_-\|phage-protein	unknown	unknown	gnl\|CDD\|226172
LR216053.1\|VFI18407.1\|12361_12529_-\|Phage-protein	unknown	unknown	unknown
LR216053.1\|VFI18428.1\|14306_14498_-\|transcription-regulator	unknown	unknown	gnl\|CDD\|238045
LR216053.1\|VFI18421.1\|13422_14007_-\|BRO-family,-N--domain-containing-protein	unknown	unknown	gnl\|CDD\|214989
LR216053.1\|VFI18372.1\|10597_11098_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI18486.1\|24530_24899_+\|cell-division-protein	unknown	unknown	gnl\|CDD\|225471
LR216053.1\|VFI18463.1\|20134_20704_+\|peptidyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
LR216053.1\|VFI18393.1\|11627_11774_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI18507.1\|26283_27561_+\|MesJ/Ycf62-family-protein	unknown	unknown	gnl\|CDD\|238950
LR216053.1\|VFI18500.1\|25018_26287_+\|beta-lactamase	unknown	unknown	gnl\|CDD\|225242
LR216053.1\|VFI18493.1\|24903_25026_+\|putative-extracellular-protein	unknown	unknown	unknown
LR216053.1\|VFI18479.1\|24271_24538_+\|S4-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109

Protein	Function_ID	Function_description	E-value
LR216053.1\|VFI18456.1\|18948_20064_+\|GTP-dependent-nucleic-acid-binding-protein-EngD	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
LR216053.1\|VFI18435.1\|14677_15418_+\|bifunctional-S24-family-peptidase/transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	7.03392e-15
LR216053.1\|VFI18449.1\|17662_18829_+\|integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	3.08621e-45
LR216053.1\|VFI18470.1\|20704_24214_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
LR216053.1\|VFI18500.1\|25018_26287_+\|beta-lactamase	gnl\|CDD\|225242	COG2367, PenP, Beta-lactamase class A [Defense mechanisms].	1.61579e-74
LR216053.1\|VFI18414.1\|12805_13432_-\|phage-protein	gnl\|CDD\|226172	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown].	4.30011e-39
LR216053.1\|VFI18428.1\|14306_14498_-\|transcription-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.83953e-14
LR216053.1\|VFI18421.1\|13422_14007_-\|BRO-family,-N--domain-containing-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	1.93154e-19
LR216053.1\|VFI18442.1\|16643_17498_+\|DNA-damage-inducible-protein-D	gnl\|CDD\|183178	PRK11525, dinD, DNA-damage-inducible protein D; Provisional.	3.46591e-127
LR216053.1\|VFI18486.1\|24530_24899_+\|cell-division-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	1.34216e-20
LR216053.1\|VFI18463.1\|20134_20704_+\|peptidyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	8.8848e-99
LR216053.1\|VFI18507.1\|26283_27561_+\|MesJ/Ycf62-family-protein	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	1.50314e-68
LR216053.1\|VFI18479.1\|24271_24538_+\|S4-RNA-binding-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.06015e-32

>LR216053.1|VFI18435.1|14677_15418_+|bifunctional-S24-family-peptidase/transcriptional-regulator
MSLGNKQIMADNIKRLLSAKGLNPRQLAIALDFKYTTVNDWVNAKTYPRIDKIEMLANFFNVSKSDLVENKNAETPTTSPIQSIYDQLTPPRQEKALTYLKKQLLEQKNENIVSENIISLDDYRESKTLPVIGVVTAGNGITQDDNLNMEKCFYTDEIPDDYDAIAYVVGNSMEPKIKNGDYLFIKNTPQVDYNTIGIFQVDGANYVKKLRQGYLESLNPDCADIQLDESNDIRTIGEVVSIYREN
>LR216053.1|VFI18428.1|14306_14498_-|transcription-regulator
MRLTLKALRANSNMKQSEVAQKLGISTTTWSKWENGKSFPDVAQVKEIEKLFGVAYDDIIFLS
>LR216053.1|VFI18421.1|13422_14007_-|BRO-family,-N--domain-containing-protein
MTTQQKDLCDFFGNFYPKGETHNKKEVLEVVTTQRFGSKHFDVYGDIQNPLFVAVEVAEMIEIQNTTDLLKRVDDDEKLTYVISRAGQKREMNMLTEFGVYEVLSQSRKPLAKEFKKVVKHILKEIRLNGYYMAGELVEEPQTTIKAPGTLAEAERYYIDTLAKAIAEAQNMDEKSRLTSKLTRFMQEVEPQWN
>LR216053.1|VFI18414.1|12805_13432_-|phage-protein
MELVYMDGKKEPYTLSSIVAECAEIKHRHLKILLNKHREDFESFGKVQFKISPSESGQNVRDYILNEQQATLLITYLRNTEPVRKFKMNLVKAFFEMRDELSKFRMQRALEKPKRKTLHDSIENWEQAPKHAHSTMNNLLLKAVTDRNAKQLREERGGYNGIDSLTSDELEQYQAFEDMVIAMMGLNMSYQEIKAMAFRNKKTRQRSA
>LR216053.1|VFI18407.1|12361_12529_-|Phage-protein
MTDKKKMGRPTTDPKNLKMTIRFNDEQSRKIENYASQNNLTKSEVIRKAVEQLPE
>LR216053.1|VFI18400.1|11777_12206_-|phage-protein
MGKKHQVVKFKDIAEKLPELEGKRLEEITKVLGYRNLESCRTNLCKLKQNNRLDFTLEKGVYSKFALLDGTVKEELEDKELSERGRYLKSVDRYKAMLNAFSIAFDSTVKAETRQKAEHDGLKALDRIPDKHYALLYDMMEG
>LR216053.1|VFI18393.1|11627_11774_-|Uncharacterised-protein
MEQYTKRASALIITFNRGVISQDEFIEEFTKLREKVVKAVSEAKNDKL
>LR216053.1|VFI18386.1|11491_11641_-|Uncharacterised-protein
MTNYDRAKRFYSRATYVLSDFMHGRIDEQEFRKQWQRLADKAVNETKKN
>LR216053.1|VFI18379.1|11117_11234_-|Uncharacterised-protein
MEETTYDIIAKSLDRISMELHQADENNDFLEYGFYQDN
>LR216053.1|VFI18372.1|10597_11098_-|Uncharacterised-protein
MIADQLKAISTNLEEIQEILVGDGTALAKREISRVLNDLDDVYNELTSTEYREQQETLKEQTERMKQRVVAEVIGGLEEREESYYRNYWGDTKFIKLLSNFDGFLFLNTYLAEITKENTYPMEQSQLLNYVWELIAVDIAKKKRGKKNVLDSWTDSSLYTRGMMID
>LR216053.1|VFI18442.1|16643_17498_+|DNA-damage-inducible-protein-D
MELQQYDELTFENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKSIPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQELQENFDNLTEEQKRLAIRDEIKHHNKSLSESAGNAGVKNFGRFHNSGYKGLYGGLTMQDIHNLKELNEGEHILDFMGSAELAANLFRATQTDEVLRRRNIKGEDLANDTHFNVGRTIRNTMKELGTTMPENLPAPRESIQELKSKQKELEKQDDNNQLSLFDDM
>LR216053.1|VFI18449.1|17662_18829_+|integrase
MKITEYTKKDGSTVYRSSVYLGIDTVTGKKVKTTISGRTKRELKAKALQAQIDFEKDGSTVYKAVEIKTYAELVENWLETYCHTVKKSTLMGTKFKIDKYLLPAFGNYRLDKLTPPIIQKQVNQWAKDYNQLGKGFQEYPLLHSLNKRILKYAVSLQAIPFNPARDVIVPRRKEKEGQKLKYLDDDNLKKFLTYLEQLPNTYKNFYDTVLYKTLLATGLRIRECLALKWSDIDLKNGTLDVNKTLNIIKEITGPKTKSSIRVIDLDNKTVLMLRLYKARQSQIGKEMGLTYEKVFSNSFDKHIDARMLSFRLVKHLERAGCPRFTFHAFRHTHASILLNAGLPYKEIQTRLGHAKLSMTMDIYSHLSKDNQKNATSFYEKAIEKLKSS
>LR216053.1|VFI18456.1|18948_20064_+|GTP-dependent-nucleic-acid-binding-protein-EngD
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
>LR216053.1|VFI18463.1|20134_20704_+|peptidyl-tRNA-hydrolase
MTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDEYIGILQSVDKVDDSVNYYLQEKNFEKTMQRYNG
>LR216053.1|VFI18470.1|20704_24214_+|transcription-repair-coupling-factor
MVTLLDLFSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDRIVLLMSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTLSPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFFDDYQKLMNQYEVFERELAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPVTFFSNLQKGLGNLKFDKIYQFNQYPMQEFFNQFSFLKEEIERYKKMDYTIILQSSNSMGSKTLEDMLEEYQIKLDSRDKTNICKESVNLIEGNLRHGFHFVDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGNANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFEKVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGLLIFGESLLEIKESKEENSI
>LR216053.1|VFI18479.1|24271_24538_+|S4-RNA-binding-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIISETRVEENV
>LR216053.1|VFI18486.1|24530_24899_+|cell-division-protein
MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR
>LR216053.1|VFI18493.1|24903_25026_+|putative-extracellular-protein
MENLLDVIEQFLSLSDEKLEELADKNQLLRLQEEKERKNA
>LR216053.1|VFI18500.1|25018_26287_+|beta-lactamase
MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKINEGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAIMGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSIFTKNSDYDTISKIAKDVYEVLK
>LR216053.1|VFI18507.1|26283_27561_+|MesJ/Ycf62-family-protein
MREPDFLNHFLKKGYFKKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEAELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIRNSYLPELEKENPRFRDAILGIGNEILDYDLAIAELSNNINVEDLQQLFSYSESTQRVLLQTYLNRFPDLNLTKAQFAEVQQILKSKSQYRHPIKNGYELIKEYQQFQICKISPQADEKEDELVLHYQNQVAYQGYLFSFGLPLEGESIQQIPVSRETSIHIRHRKTGDVLIQNGHRKKLRRLFIDLKIPMEKRNSALIIEQFGEIVSILGIATNNLSKKTKNDIMNTVLYIEKIDR

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Crispr_ID: LR216053_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR216053_2

147974-148069

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR216053_2

>merge|LR216053|2|147974-148069|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>LR216053|2|2|147974-148069|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
LR216053.1\|VFI19635.1\|158954_159596_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|188353
LR216053.1\|VFI19542.1\|146145_147057_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|372574
LR216053.1\|VFI19558.1\|147629_147956_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
LR216053.1\|VFI19550.1\|147049_147643_-\|membrane-protein	unknown	unknown	gnl\|CDD\|227053
LR216053.1\|VFI19562.1\|148094_149261_-\|cyanate-permease	unknown	unknown	gnl\|CDD\|225365
LR216053.1\|VFI19509.1\|141077_142553_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|378792
LR216053.1\|VFI19619.1\|156510_156798_+\|bacteriocin,-putative	unknown	unknown	gnl\|CDD\|273735
LR216053.1\|VFI19525.1\|144143_144947_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|339103
LR216053.1\|VFI19491.1\|138953_139883_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
LR216053.1\|VFI19585.1\|152672_153305_-\|phosphatase	unknown	unknown	gnl\|CDD\|319798
LR216053.1\|VFI19501.1\|139896_140820_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
LR216053.1\|VFI19627.1\|156849_158958_+\|bacteriocin-immunity-protein	unknown	unknown	gnl\|CDD\|273736
LR216053.1\|VFI19577.1\|150517_152368_+\|nucleoside-diphosphate-sugar-isomerase	unknown	unknown	gnl\|CDD\|224011
LR216053.1\|VFI19611.1\|155120_155708_+\|LysM-domain-protein	unknown	unknown	gnl\|CDD\|212030
LR216053.1\|VFI19601.1\|154207_154879_-\|putative-L-serine-dehydratase-beta-subunit	unknown	unknown	gnl\|CDD\|224674
LR216053.1\|VFI19534.1\|145018_146083_-\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|370966
LR216053.1\|VFI19517.1\|142824_143811_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
LR216053.1\|VFI19484.1\|138284_138635_+\|surface-anchored-protein	unknown	unknown	unknown
LR216053.1\|VFI19593.1\|153326_154199_-\|L-serine-dehydratase,-alpha-subunit	unknown	unknown	gnl\|CDD\|129801
LR216053.1\|VFI19570.1\|149411_150479_+\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|133016

Protein	Function_ID	Function_description	E-value
LR216053.1\|VFI19635.1\|158954_159596_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|188353	TIGR03608, L_ocin_972_ABC, putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	1.18565e-111
LR216053.1\|VFI19542.1\|146145_147057_-\|Uncharacterised-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	1.39908e-38
LR216053.1\|VFI19558.1\|147629_147956_-\|transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	3.12912e-19
LR216053.1\|VFI19550.1\|147049_147643_-\|membrane-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	3.23104e-64
LR216053.1\|VFI19562.1\|148094_149261_-\|cyanate-permease	gnl\|CDD\|225365	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism].	1.15136e-125
LR216053.1\|VFI19509.1\|141077_142553_+\|extracellular-solute-binding-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.24398e-44
LR216053.1\|VFI19619.1\|156510_156798_+\|bacteriocin,-putative	gnl\|CDD\|273735	TIGR01653, hypothetical_protein, bacteriocin, lactococcin 972 family. This model represents bacteriocins related to lactococcin 972. Members tend to be found in association with a seven transmembrane putative immunity protein. [Cellular processes, Toxin production and resistance].	6.91587e-26
LR216053.1\|VFI19525.1\|144143_144947_+\|Uncharacterised-protein	gnl\|CDD\|339103	pfam14132, DUF4299, Domain of unknown function (DUF4299). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 275 and 313 amino acids in length. There are two conserved sequence motifs: RGF and DAY. There are two completely conserved residues (P and D) that may be functionally important.	8.80291e-113
LR216053.1\|VFI19491.1\|138953_139883_+\|ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
LR216053.1\|VFI19585.1\|152672_153305_-\|phosphatase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.4095e-97
LR216053.1\|VFI19501.1\|139896_140820_+\|ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.04007e-69
LR216053.1\|VFI19627.1\|156849_158958_+\|bacteriocin-immunity-protein	gnl\|CDD\|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	0
LR216053.1\|VFI19577.1\|150517_152368_+\|nucleoside-diphosphate-sugar-isomerase	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
LR216053.1\|VFI19611.1\|155120_155708_+\|LysM-domain-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	5.22512e-13
LR216053.1\|VFI19601.1\|154207_154879_-\|putative-L-serine-dehydratase-beta-subunit	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
LR216053.1\|VFI19534.1\|145018_146083_-\|Uncharacterised-protein	gnl\|CDD\|370966	pfam10310, DUF5427, Family of unknown function (DUF5427). This is a domain of unknown function. Family members found in Saccharomyces cerevisiae, are synthetic lethal with genes involved in maintenance of telomere capping. However, experimental evidence is yet to verify the exact function of family members and the domain.	3.51062e-06
LR216053.1\|VFI19517.1\|142824_143811_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
LR216053.1\|VFI19593.1\|153326_154199_-\|L-serine-dehydratase,-alpha-subunit	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.44295e-105
LR216053.1\|VFI19570.1\|149411_150479_+\|glycosyl-transferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	8.22113e-110

>LR216053.1|VFI19558.1|147629_147956_-|transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWTLYTDTINGIIEGSIRHDKN
>LR216053.1|VFI19550.1|147049_147643_-|membrane-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEAAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVTRFFGLLIVRLVQFVLKKGKRGNQHA
>LR216053.1|VFI19542.1|146145_147057_-|Uncharacterised-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHALTITDSFDDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILQLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTENHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>LR216053.1|VFI19534.1|145018_146083_-|Uncharacterised-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVADKAEETIADLDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEVGEARTEIEEKKASNSTEEEPDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQDPKSRDKWKEQVLDFWSWLVEAIKSPTSKLETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIISILVATTLFFFSFLLGSFVVRRFIHQEKYWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>LR216053.1|VFI19525.1|144143_144947_+|Uncharacterised-protein
MNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADAVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDYESIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK
>LR216053.1|VFI19517.1|142824_143811_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEDLWFKIDEESEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>LR216053.1|VFI19509.1|141077_142553_+|extracellular-solute-binding-protein
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>LR216053.1|VFI19501.1|139896_140820_+|ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLIALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>LR216053.1|VFI19491.1|138953_139883_+|ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>LR216053.1|VFI19484.1|138284_138635_+|surface-anchored-protein
MTGVSNPTTDSAPLVLAEAKKAFADDSLTEQGLRDILQTVKDAIASLESIKESQSATKDGGQTAGKETADKDVLENSQEELQKAVLFLADEKGSEHTAAELIDNLKEVIAKLKANA
>LR216053.1|VFI19562.1|148094_149261_-|cyanate-permease
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSTQLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPAVAALLLIDILMTVALFTVDRADKIL
>LR216053.1|VFI19570.1|149411_150479_+|glycosyl-transferase
MTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRYSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKRTIIYLDKISQINQNMLQ
>LR216053.1|VFI19577.1|150517_152368_+|nucleoside-diphosphate-sugar-isomerase
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE
>LR216053.1|VFI19585.1|152672_153305_-|phosphatase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>LR216053.1|VFI19593.1|153326_154199_-|L-serine-dehydratase,-alpha-subunit
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIKNEKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>LR216053.1|VFI19601.1|154207_154879_-|putative-L-serine-dehydratase-beta-subunit
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>LR216053.1|VFI19611.1|155120_155708_+|LysM-domain-protein
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVDQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>LR216053.1|VFI19619.1|156510_156798_+|bacteriocin,-putative
MRKLVKIGVASLMVCGILATTNALAVWVEGGQWNYGVGWTGTFGYSDYLHSTRYHTATVRHGGRTSKDYAKPEAWARASLTKIPPTGMEYFYGFE
>LR216053.1|VFI19627.1|156849_158958_+|bacteriocin-immunity-protein
MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPNTGIKKVILMPASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
>LR216053.1|VFI19635.1|158954_159596_+|ABC-transporter-ATP-binding-protein
MIELKNITKTIGGKVILDNLSLRIDQGDLVAIVGKSGSGKSTLLNLLGLIDGDYSGRYEIFGQTNLAVNSAKSQTIIREHISYLFQNFALIDDETVEYNLMLALKYVKLPKKDKLKKVEEILERVGLSATLHQRVSELSGGEQQRIAVARAILKPSQLILADEPTGSLDPENRDLVLKFLLEMNREGKTVIIVTHDAYVAQQCHRVIELGEGK

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Crispr_ID: LR216053_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR216053_3

1102590-1102672

Orphan

Consensus_repeat	Method
TTCTGGTGTCTGCCACCGCTTGGCCCTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR216053_3

>merge|LR216053|3|1102590-1102672|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCCTTACGTCCAAGATTGCTATCGGATTTTGTTCTGGTGTCCGCCACCGCTTGGCCCTTA

>LR216053|3|3|1102590-1102672|CRISPRCasFinder
TTCTGGTGTCTGCCACCGCTTGGCCCTTA	CGTCCAAGATTGCTATCGGATTTTG
TTCTGGTGTCCGCCACCGCTTGGCCCTTA

Protein	Signature genes	Signature genes Name	Protein_function
LR216053.1\|VFI26126.1\|1112711_1113011_-\|Tn5253-bacteriocine-putative	unknown	unknown	unknown
LR216053.1\|VFI26068.1\|1101994_1102405_-\|OmpA-domain-containing-protein	unknown	unknown	unknown
LR216053.1\|VFI26113.1\|1110356_1112237_-\|TraG/TraD-family-protein	unknown	unknown	gnl\|CDD\|226036
LR216053.1\|VFI26050.1\|1095053_1095350_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26119.1\|1112233_1112722_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26101.1\|1109222_1110077_-\|membrane-protein	unknown	unknown	unknown
LR216053.1\|VFI26107.1\|1110093_1110336_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26089.1\|1106501_1108859_-\|Type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|274279
LR216053.1\|VFI26022.1\|1090566_1090881_-\|Bacterial-protein-of-uncharacterised-function-(DUF961)	unknown	unknown	gnl\|CDD\|368761
LR216053.1\|VFI26078.1\|1103033_1103642_+\|phage-protein	unknown	unknown	gnl\|CDD\|181427
LR216053.1\|VFI26041.1\|1092975_1093065_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26016.1\|1090164_1090548_-\|Bacterial-protein-of-uncharacterised-function-(DUF961)	unknown	unknown	gnl\|CDD\|368761
LR216053.1\|VFI26035.1\|1091695_1092817_-\|ThiF-family-protein	unknown	unknown	gnl\|CDD\|366360
LR216053.1\|VFI26044.1\|1093078_1094662_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|224055
LR216053.1\|VFI26056.1\|1095363_1095648_-\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26062.1\|1095722_1101947_-\|SNF2-family-protein	unknown	unknown	gnl\|CDD\|226993
LR216053.1\|VFI26071.1\|1102867_1103032_+\|Uncharacterised-protein	unknown	unknown	unknown
LR216053.1\|VFI26084.1\|1103676_1106490_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380090
LR216053.1\|VFI26028.1\|1091196_1091703_-\|Zn-dependent-protease-of-MPP-family	unknown	unknown	gnl\|CDD\|223685
LR216053.1\|VFI26095.1\|1108809_1109169_-\|PrgI-family-protein	unknown	unknown	gnl\|CDD\|378907

Protein	Function_ID	Function_description	E-value
LR216053.1\|VFI26022.1\|1090566_1090881_-\|Bacterial-protein-of-uncharacterised-function-(DUF961)	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	7.00664e-46
LR216053.1\|VFI26016.1\|1090164_1090548_-\|Bacterial-protein-of-uncharacterised-function-(DUF961)	gnl\|CDD\|368761	pfam06125, DUF961, Bacterial protein of unknown function (DUF961). This family consists of several hypothetical bacterial proteins of unknown function.	1.49543e-43
LR216053.1\|VFI26035.1\|1091695_1092817_-\|ThiF-family-protein	gnl\|CDD\|366360	pfam00899, ThiF, ThiF family. This domain is found in ubiquitin activating E1 family and members of the bacterial ThiF/MoeB/HesA family. It is repeated in Ubiquitin-activating enzyme E1.	9.52653e-32
LR216053.1\|VFI26044.1\|1093078_1094662_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.16677e-60
LR216053.1\|VFI26089.1\|1106501_1108859_-\|Type-IV-secretion-system-protein	gnl\|CDD\|274279	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC. The protein family described here is common among the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The protein conyains the Walker A and B motifs and so is a putative nucleotide triphosphatase.	1.42927e-14
LR216053.1\|VFI26062.1\|1095722_1101947_-\|SNF2-family-protein	gnl\|CDD\|226993	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair].	3.10293e-20
LR216053.1\|VFI26084.1\|1103676_1106490_-\|CHAP-domain-containing-protein	gnl\|CDD\|380090	pfam18013, Phage_lysozyme2, Phage tail lysozyme. This domain has a lysozyme like fold. It is found in the tail protein of various phages probably giving them the ability to degrade the host cell wall peptidoglycan layer.	8.60411e-37
LR216053.1\|VFI26028.1\|1091196_1091703_-\|Zn-dependent-protease-of-MPP-family	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.87406e-22
LR216053.1\|VFI26113.1\|1110356_1112237_-\|TraG/TraD-family-protein	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	4.88946e-58
LR216053.1\|VFI26078.1\|1103033_1103642_+\|phage-protein	gnl\|CDD\|181427	PRK08445, PRK08445, dehypoxanthine futalosine cyclase.	0.00920057
LR216053.1\|VFI26095.1\|1108809_1109169_-\|PrgI-family-protein	gnl\|CDD\|378907	pfam12666, PrgI, PrgI family protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 116 and 146 amino acids in length. This protein is found in an operon that is part of a Type IV secretion system.	8.01688e-15

>LR216053.1|VFI26068.1|1101994_1102405_-|OmpA-domain-containing-protein
MEAIYQRDSDQDGLTDAQELALGTNPLSADSDGDGRSDLVEVEEGTNPLEKDLQDIDQTSITEPSSVFMEMKQKISDMMESHYKEFIQALISIETGIENQQDLEDLYTYYMRTDSVSLLSSDLETSPQEVEMEIEL
>LR216053.1|VFI26062.1|1095722_1101947_-|SNF2-family-protein
MEVMQLLAMFRGTIPKDREKMDLFLRYQAQHFDEKWQDLVESFLAEEGKIEEIPHVYSFDQDIVSFLEASSENNDQDLESYTRNFGQAGLSKLSQLSSWEKNLVLEVATYNLSTRFYIQSEKEKLEPLSELVFHQNQDVNLVNVYRVANNLSDRVSRDIEEFLLMVDSKELKKEVLEIHFEEKEGDVLAYLGSELVATLDTVTDLVHHEENYQQLPLTQKLKIITHFDDVKARSEKSNQVEEVLSPSSGIEQETEETNSFSNVDKIVEEALKEYPIGSQVSYKGQVFQLVSIENAQLNDLVRLELFNDSNQLFEENPILYLNTLEEIEQVLSLVELEKEDSEIEIDSSSKSQEIDLFSYLEEENENEKDKDKETKPLISGIKETDVPVQDFVFPDDLEDFYPKTNREKIETNIAAIELVKRLEKEGRQASPEEQELLAKYVGWGGLANEFFDELNPKYEAERLTLKSLVSKSEYSTMKQSSLTAYYTDPMIIRQIWQKLLDDGFEGGRILDPSMGTGNFFAAMPRSIREKSELYGVELDSVTGAIAKQLHPNTHIEVRGFEEVPYQNNSFDLVLTNVPFGNFRIADKNYDRPYMIHDYFVKHSLDLVRDGGQVSIISSIGTMDKRTDNVLQEIKSSTHFLGGVRLPDTAFKKIAGTRVTTDLLFFQKDQAKNLHEEELVFSGSIPFEEDKRVWINPYFDGKYNTQVLGQYEVRNFNGGTLNVKGESETFTTDIMEALENVEAPKPIDNSLKEPVFIQEKVDHSIPSRIRENLALYSFGYEGNQIYYRDTHGIRKSSKVDEISYYVDEKGEFKAWDSSLSEHKIDRFVQLHLTDEEALDVYKSEEASKRGKYKGLFKKTVFYESPLSDKDISRIKGMVDLRETYQSLIEIQRHQDYSRTDFQVLLSKLNRDYDRFVSQFGYLNASVNRNLFDSDDKYSLLASLEDEYIDSKDQKVKYKKSLAFEKALVRPERVIARVSTALDAVNSSLSDGRGVDLDYMVSIYPEHSQAAILDELGDQVLMDPESYLRGERKYLSKNQFLSGDILNKIEVVQLLVEENNQECDWSHALDLLESVRPPRIHLADIEFKIGSRWIPQSVYGKFAFECFTNREFELSSPDVEQVIEVNPVDGQVHLKTSFAYRYPSAKDSSLGVSGSRYDTGRKIFENLLNSNQPTITMTVTEGEKKKTITDLEKTSVLRAKEQHLQELFQEFVSRYPEVQQVIEESYNRLYNRTVSREYDGSHLVIDGLAQNISLRPHQENAIQRIVEEKRALLAHEVGSGKTLTMLGAGFKLKELGMVHKPLYVVPSSLSAQFGQEIMKFFPTKKVFVTTKKDFVKSRRKQFVSRIITGDYDAIVIGDSQFEKIPVSKERQMNYIEDKLNELREIKTHSENKYTVKEAEQSISGLEKQLEELQRFNRDSFIDFENLGIDFLFVDEAHHFKNIRPITGLGNVAGITNTTSKKNVDMEMKVRQIQEEHDFKNIVFATGTPVSNSISELYTMMNYIQPDILKRYQVDYFDSWVGAFGEIQNSMELAPTGDKYQPKKRFKKFVNLPELMKIYKETADIQTQDMLDLPVPEAHIIPIESELTENQKLYLEELVMRSDMVKCGTVDPSQDNMLKITGEARKLAIDMRLLDSSYSLADNHKLLQVVDNVERIYREGMGNKATQMIFSDIGTPKKKDNGFDVYSEIKALLVDRGIPSKEIAFVHDANSDEKKNSLSRKVNAGEVRILLASTEKGGTGLNVQSKMKAVHHLDVPWRPSDIQQRNGRIIRQGNENKEVDIYHYITKGSFDNYLWATQENKLRYIKQIMTSKEPIRAAEDIDEQTMTASDFKALATGNPYLKYKMELENDLTLLENQRRAFQRSKDHYRHTISYCEENMPILEKRLSKYEGDIQQSEMSKDQAFSMTVGKQAFEQRAEAGESLHRLIRHNQSDSKEFRTLASYRGFDIKMLSLPTNQPLPETFSVKIVGENQYSVSLDLYSPLGTIQRLQHTIDHIKDDQVKTQNLLDELKDKWTTAKVEIEKNFPKEEDYQTKKAEYDVLAPLIETETDLDIIDQALRQFHEKGKEKQEQLSFELD
>LR216053.1|VFI26056.1|1095363_1095648_-|Uncharacterised-protein
MMEDTYYQLEEALVQGFQTPEEYQAYKELKEHYEEVTGDYSFSKRELTSQLEIALQNHQGVDFEEHEKEEYLDLVQKLEEFDSSLATHYRQLID
>LR216053.1|VFI26050.1|1095053_1095350_-|Uncharacterised-protein
MNDLLLIPVIFLAVGGILILLWRLFLIASGLFLIGFISFLIFVEVYGIYLFFTEPSLYFDDIRQHGLTSFTAVYFFINLMLVLGFSWRFINSINKHKM
>LR216053.1|VFI26044.1|1093078_1094662_-|ABC-transporter-ATP-binding-protein/permease
MNQIMKQYKLLYFLIILLSLTSALLMTFFSLQLGRILDSISNSNSGLLFHITISVGSILLWFLISSSYSYLKNEYVKKVILDLKRRLLLHYLSREFNQTDNRNHSDFLNNITKNSDLIQENLLIPKISLIANLGSLIMSVVAIIYIEWRLALVFLLLSSITVFLSQIPGKLMTKSTNNYSLQNNHYLSKMTNFINGFEQIKLLNIQSWTQEKIQGISLEFEESRKTYQFLKDLASTTGILLSFGSQLSCMVAGIFFVRNNLLTIGLLVASIQLLNGVFAPLQSILYNKNLISSSKSIIDNIQENLYETNQGTSHKTSTIDCDNISTISISQLHYEIENKILFDHFSYEFKKGKRYAIIGASGAGKTTLVKLILNYYPKNLYDGEIKINGKQNIDISSEELYKDIAFVQKNDFLIEGNILENIKLARNLHLTEKLRKSLGFNEDFLRKNLAQSNQIISEGEKQRIDLARFLVKTYSVYIFDEPTSNLDPIKAKEIMDYILSIKDAIVIVITHDQNPEILEEFDQIIVL
>LR216053.1|VFI26041.1|1092975_1093065_-|Uncharacterised-protein
MIMIMEDFNILELEFEEIREEDTTNWYFI
>LR216053.1|VFI26035.1|1091695_1092817_-|ThiF-family-protein
MDNYFPKWNQDRIVYQWKNDRLRIGADDVDVLEITGYSDFWSDLISCCNGINSFEEIKDLLRKKYDISENIIEKYISKFSDRNLLEILDRPVNQIDHYLINESLETYYSSEGIGGIKLLEKLSNLKVTILGCGAGGSHIALQLAQLGVGRLHLVDDDIVKENNINRQSMFTFNDIGKYKVDCVKDCILKRNYQCVVTKRKLKMSTVDAVKKEISESDWVFCCMDEPPYIAQRLVNRACYLFNIPSIYCFSQRSAGKLLFCNPNIQNIGCVDCLLYEQDSDNFQNLVKKFSNYDGKLITANILTNILLLSSWVVKKWLDCVTEKNSNVWNTLFRFDFYSFREDEFKHFSKQSHCPTCGHDFDKSKLWEILKIDE
>LR216053.1|VFI26028.1|1091196_1091703_-|Zn-dependent-protease-of-MPP-family
MNKKIIFKKNQASKFAYFSLMFVAGTSIEQVNELGFSHLIEHLLIRAGNEQSLNELFDMNGAAIKGETSRDYINLSGYCLAEDFNKIFKILISRIFNLSITEDELLREKKIVLIELNQYENSKKSINDNRVIFKNSSWSIDIIGTRGNIEYVSLETIYKFYIKNSIKI
>LR216053.1|VFI26022.1|1090566_1090881_-|Bacterial-protein-of-uncharacterised-function-(DUF961)
MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAEAGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE
>LR216053.1|VFI26016.1|1090164_1090548_-|Bacterial-protein-of-uncharacterised-function-(DUF961)
MRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK
>LR216053.1|VFI26071.1|1102867_1103032_+|Uncharacterised-protein
MATISLTRDIKLTNEDALKILNHKPSKKLQAVLKSIESQDATAPTKNKLISKYL
>LR216053.1|VFI26078.1|1103033_1103642_+|phage-protein
MTIQVTPLKQYLENIQVLAPDKTEKQVQDLFKTIILENVDFNGNEEMLTYLSDKAPNFEKQHRSRNFIVEETETNNIIGFFSLSLKVVDISDLEKSLKKKLVLKGKSPKNIDYLPVLLIGQFGKNTKLNKLSGQELFEIVIQKIEEFRAIVGTQMVFLDSINHPKVIQFYEQFGFVAYSQLIKDDHQVSYQPMALNMSLYKK
>LR216053.1|VFI26084.1|1103676_1106490_-|CHAP-domain-containing-protein
MKDKRKIIRARKAFRRSLKDEKKFLKKGKKEVRKQKKDSAVLDEKAWKKEIKQKLEEMREASKERVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATGRFTKKRLTNTKERYHHFKDGKGWKLAKDKPSSFKNRFRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFLLLLIMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELHKPVHLFSSETYKDYLSTLWHDLNDGEDLKSMQDLYESPKYKLSKDDQEEIKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDGKPTLQEYILLEAKVHQTIVAPMDGVVSLDGDDVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYEFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDFMLHGDSPYYQSWLKDFFKNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPAIYGHVAFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
>LR216053.1|VFI26089.1|1106501_1108859_-|Type-IV-secretion-system-protein
MKRKSNTLKKQKTSMTNKKEKVKGKKEEVLPSTANTLSYQALYQNGLMQVKEDYFSQSYLLGDVNYQTVGLEDKGAIIEKYSDLINSLDDQTNFQLTIFNKRLNLEKFRQSVLYEEKEDGYDSYRQELNRMMNQNLDSGENNFSAVKLISFGRKDSNPKQAYRSLSQIGEYFKSGFSEIDARFESLAGEERVNLLADMLRGEHHLPFSYRDLTRSGQTTRHFIAPNLLDFKNKNYLQINDRLLQIVYVRDYGMELGDQFIRDLMQGDLELIVSLHAQSSTKADAMKKLRTKKTLMESQKIGEQQKLARTGIYLEKVGHVLESNIDEAEELLKTMTETGDKLFQTVFLIGVFGQDEEELKQALDTIQQVAGSNDLMIDKLPYMQEAAFNSLLPFGCDFLEGVSRSLLTSNVAVNSPWTSVDLQDRSGKYYGINQISSNIITIDRSLLNTPSGLILGTSGAGKGMATKHEIITTKIKESGENTEIIIVDPEAEYSVIGRAFGGEMIDIAPDSQTYLNVLDLSEENMDEDPVKVKSEFLLSFIGKLLDRKMDGREKSIIDRVTRLTYQSFKEPSLEEWVFVLSQQPEEEAQNLALDMELYVEGSLDIFSHKTNIQTGSNFLIYNVKKLGDELKQIALMVVFDQIWNRVVRNQKLGKKTWIYFDEMQLLLLDKYASDFFFKLWSRVRKYGASPTGITQNVETLLLDPNGRRIIANSEFMILLKQAKNDREELVQLLGLSKELEKYLVNPEKGAGLIKAGSVVVPFKNKIPQGTQLFDIMSTDPDKMASN
>LR216053.1|VFI26095.1|1108809_1109169_-|PrgI-family-protein
MNTRVFKDISKYQHRAWLGFTTRQIIFVLPAFIVTIIVLGLNLFFWQFGDWFVYGFVFAFTIPLMLFGVYKPNDLYFEHYLKYRLHFELTVPLRTITGKKGPEHEKKIKYIKETKNFND
>LR216053.1|VFI26101.1|1109222_1110077_-|membrane-protein
MNLSLVSPFVYLASEKISAENLFEGFNVDLQSTVDLIKSLSSYNPTVWTYMSSITKSVMQPLGVAILSVVLILEFSKMAKKIANSGGAMTFEALAPMLISYIMVAVVITNTTVIVEAIIGIASHAIEQVASIVAHGGAKYDTISGLKGSGFIGRMIVGFFALLIWLVRIVSAAMVNLLVSIRFIQLYLMIPFAPLTIPTFLSDEWKSIGIGYLKNIMVYAVQGVLIFLIVSLVPLFESAGKIAVSNGAGVLQSLAIMFGSLVQAILLIIALVGSQRTARSILGM
>LR216053.1|VFI26107.1|1110093_1110336_-|Uncharacterised-protein
MITHFKGFVYGVDASAMFAQAMSLLQKGLIAVGAFLVVVGIVNLATNIKDGGPGVRNAILEIVGGVMVGAAGAFVTQISI
>LR216053.1|VFI26113.1|1110356_1112237_-|TraG/TraD-family-protein
MMYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKTGKLFLERGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGQEKSMVYLVIPDNDSTFRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEIGNMKRHECLVRIANMPVFKSKKYYSTKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK
>LR216053.1|VFI26119.1|1112233_1112722_-|Uncharacterised-protein
MSSEQQERMAVQYAERSLLFTVKSLLKILEWSRRQALAQDSAYKIGVQKLEELLQSPYSIDTINLKKDFLDKPIDIEKFKAFLEKEEIPLAIAWQGDSLHFYTKDRSILDNHLEHLLEKMVNDPDKLADFTMDKSLDDAIDEAKSQITFRQEGAVKQKEMVR
>LR216053.1|VFI26126.1|1112711_1113011_-|Tn5253-bacteriocine-putative
MKVVNLYDLKQMGNKGGCTIQLIHHFPFGMGLGHLKKDYIEFKRVGIVDGKAVEVTLREPYSRDLLQVVKSIKQRQKLIAYRYKEGKLLFVKKEASDVL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448641	Streptococcus satellite phage Javan753, complete genome	2187-2216	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448433	Streptococcus satellite phage Javan328, complete genome	2779-2808	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448628	Streptococcus satellite phage Javan741, complete genome	3052-3081	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448615	Streptococcus satellite phage Javan728, complete genome	3051-3080	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448420	Streptococcus satellite phage Javan309, complete genome	2778-2807	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448620	Streptococcus satellite phage Javan733, complete genome	3053-3082	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448614	Streptococcus satellite phage Javan727, complete genome	3128-3157	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448640	Streptococcus satellite phage Javan752, complete genome	1927-1956	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448619	Streptococcus satellite phage Javan732, complete genome	3128-3157	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448610	Streptococcus satellite phage Javan723, complete genome	2638-2667	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448623	Streptococcus satellite phage Javan736, complete genome	2108-2137	0	1.0
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448889	Streptococcus phage Javan262, complete genome	13152-13181	6	0.8
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448672	Streptococcus phage Javan117, complete genome	25572-25601	7	0.767
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	MK448849	Streptococcus phage Javan128, complete genome	24992-25021	7	0.767
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP015129	Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence	5128-5157	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	8387-8416	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	22240-22269	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NC_021520	Lactobacillus plantarum 16 plasmid Lp16L, complete sequence	1702-1731	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP028234	Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence	12877-12906	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP028246	Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence	8549-8578	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP020099	Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence	8125-8154	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP032657	Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence	8799-8828	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP013154	Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence	6717-6746	8	0.733
LR216053_1	1.1\|15673\|30\|LR216053\|CRISPRCasFinder	15673-15702	30	NZ_CP054260	Lactobacillus plantarum strain TCI507 plasmid unnamed1	7422-7451	8	0.733

1. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448641 (Streptococcus satellite phage Javan753, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

2. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448433 (Streptococcus satellite phage Javan328, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

3. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448628 (Streptococcus satellite phage Javan741, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

4. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448615 (Streptococcus satellite phage Javan728, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

5. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448420 (Streptococcus satellite phage Javan309, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

6. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448620 (Streptococcus satellite phage Javan733, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

7. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448614 (Streptococcus satellite phage Javan727, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

8. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448640 (Streptococcus satellite phage Javan752, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

9. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448619 (Streptococcus satellite phage Javan732, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

10. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448610 (Streptococcus satellite phage Javan723, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

11. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448623 (Streptococcus satellite phage Javan736, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

12. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448889 (Streptococcus phage Javan262, complete genome) position: , mismatch: 6, identity: 0.8

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacattttttgctgctt	Protospacer
****************.***** **.  .*

13. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

14. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

15. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP015129 (Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

16. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

17. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

18. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NC_021520 (Lactobacillus plantarum 16 plasmid Lp16L, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

19. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP028234 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

20. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP028246 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

21. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP020099 (Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

22. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP032657 (Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

23. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP013154 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

24. spacer 1.1|15673|30|LR216053|CRISPRCasFinder matches to NZ_CP054260 (Lactobacillus plantarum strain TCI507 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37002 : 79025

Streptococcus_phage(95.08%)

tail,holin,terminase,transposase,integrase

attL 39374:39394|attR 77823:77843

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI18539.1\|37002_37209_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.8e-24	85.3
VFI18547.1\|37525_37762_+	recombination regulator RecX	NA	NA	NA	NA
VFI18555.1\|37950_39279_+	adenylosuccinate synthetase	L7Y4J5	Megavirus	3.6e-72	37.1
39374:39394	attL	NA	NA	NA	NA
VFI18563.1\|39520_40669_-\|integrase	integrase	A0A141E192	Streptococcus_phage	2.1e-217	100.0
VFI18572.1\|40840_41755_-	phage protein	E8ZDT3	Streptococcus_phage	1.1e-155	100.0
VFI18580.1\|41767_42502_-	phage transcriptional repressor	E8ZDN4	Streptococcus_phage	6.1e-138	100.0
VFI18589.1\|42667_42883_+	phage repressor	E8ZDN3	Streptococcus_phage	2.7e-30	100.0
VFI18597.1\|42910_43621_+	gp15	E8ZDT0	Streptococcus_phage	7.4e-133	100.0
VFI18605.1\|43633_43891_+	phage protein	A0A1S5SEV6	Streptococcus_phage	1.2e-43	100.0
VFI18613.1\|43976_44297_+	Putative phage lipoprotein	A0A1S5SCY0	Streptococcus_phage	1.9e-48	100.0
VFI18621.1\|44312_44609_+	gp18	A0A1S5SDE3	Streptococcus_phage	6.2e-49	100.0
VFI18625.1\|44571_45408_+	gp19	A0A1S5SDA2	Streptococcus_phage	3.6e-126	99.6
VFI18633.1\|45395_45554_+	phage protein	A0A1S5SEV3	Streptococcus_phage	2.8e-24	100.0
VFI18641.1\|45547_46318_+	DNA replication protein	A0A1S5SD12	Streptococcus_phage	2.3e-140	100.0
VFI18649.1\|46332_46527_+	Uncharacterised protein	A0A1S5SGB5	Streptococcus_phage	1.6e-29	100.0
VFI18657.1\|46526_47201_+	DNA methylase	A0A1S5S9L2	Streptococcus_phage	1.9e-133	100.0
VFI18665.1\|47210_47429_+	phage protein	A0A1S5SCZ1	Streptococcus_phage	2.1e-38	100.0
VFI18673.1\|47428_47734_+	Phage protein	A0A1S5SF94	Streptococcus_phage	1.0e-51	100.0
VFI18681.1\|47726_47819_+	phage protein	A0A1S5SF60	Streptococcus_phage	3.3e-09	100.0
VFI18689.1\|47824_47992_+	phage protein	A0A1S5SF87	Streptococcus_phage	3.9e-24	100.0
VFI18697.1\|48162_48477_+	gp24	A0A1S5SDB3	Streptococcus_phage	2.2e-57	100.0
VFI18705.1\|48478_49153_+	phage protein	A0A1S5SD64	Streptococcus_phage	4.0e-128	100.0
VFI18713.1\|49152_49440_+	Uncharacterised protein	A0A1S5SD24	Streptococcus_phage	3.0e-48	100.0
VFI18721.1\|49439_49628_+	Uncharacterised protein	A0A1S5S928	Streptococcus_phage	5.5e-27	100.0
VFI18729.1\|49624_49963_+	Uncharacterised protein	A0A1S5SDB9	Streptococcus_phage	4.7e-61	100.0
VFI18737.1\|49964_50225_+	gp27	A0A1S5SAN2	Streptococcus_phage	4.4e-43	100.0
VFI18745.1\|50224_50683_+	Uncharacterised protein	X2KU19	Streptococcus_phage	3.6e-72	100.0
VFI18753.1\|50691_51075_+	phage membrane protein	A0A1S5S9M5	Streptococcus_phage	8.8e-64	100.0
VFI18761.1\|51086_51494_+	YopX protein	A0A1S5SCZ9	Streptococcus_phage	1.1e-77	100.0
VFI18769.1\|51493_51730_+	gp29	A0A141E175	Streptococcus_phage	2.1e-39	100.0
VFI18777.1\|51722_51899_+	Uncharacterised protein	A0A141E174	Streptococcus_phage	3.7e-25	100.0
VFI18785.1\|51891_52122_+	transcriptional regulator	A0A1S5SG49	Streptococcus_phage	1.8e-35	100.0
VFI18793.1\|52194_52623_+	gp31	E8ZDR4	Streptococcus_phage	4.6e-69	100.0
VFI18801.1\|52912_53479_+	gp32	A0A141E172	Streptococcus_phage	9.9e-104	100.0
VFI18809.1\|53712_54057_+	HNH endonuclease domain protein	E8ZDL6	Streptococcus_phage	1.2e-64	100.0
VFI18817.1\|54195_55659_+	gp34	E8ZDR0	Streptococcus_phage	2.9e-280	100.0
VFI18825.1\|55651_57043_+	gp35	E8ZDQ9	Streptococcus_phage	1.5e-265	100.0
VFI18830.1\|57032_57272_+	Uncharacterised protein	A0A1S5SD22	Streptococcus_phage	1.2e-42	100.0
VFI18838.1\|57324_57555_+	Uncharacterised protein	A0A1S5SGD0	Streptococcus_phage	6.7e-35	100.0
VFI18846.1\|57605_59018_+\|terminase	phage terminase large subunit	A0A126GGI1	Streptococcus_phage	2.3e-279	100.0
VFI18854.1\|59100_59565_+	gp39	A0A126GGH5	Streptococcus_phage	8.4e-77	100.0
VFI18862.1\|59571_60468_+	phage structural protein	A0A126GGI3	Streptococcus_phage	3.1e-168	100.0
VFI18870.1\|60473_60686_+	phage protein	A0A1S5SD43	Streptococcus_phage	1.4e-31	100.0
VFI18878.1\|60689_61130_+	gp42	A0A126GGH6	Streptococcus_phage	5.2e-76	100.0
VFI18886.1\|61074_61413_+	gp43	A0A1S5SDD8	Streptococcus_phage	1.4e-60	100.0
VFI18894.1\|61405_61642_+	phage protein	A0A1S5SD20	Streptococcus_phage	9.9e-34	100.0
VFI18902.1\|61638_61974_+	gp45	A0A1S5SG59	Streptococcus_phage	3.1e-57	100.0
VFI18908.1\|62040_62598_+\|tail	major tail protein	A0A126GGH8	Streptococcus_phage	3.2e-99	100.0
VFI18916.1\|62603_62879_+	phage protein	E8ZDK2	Streptococcus_phage	1.2e-43	100.0
VFI18924.1\|62890_63277_+	phage protein	E8ZDP6	Streptococcus_phage	1.6e-65	100.0
VFI18933.1\|63276_65742_+	PblA	A0A141E161	Streptococcus_phage	1.0e-253	100.0
VFI18941.1\|65741_66440_+	phage protein	E8ZDP4	Streptococcus_phage	2.5e-133	100.0
VFI18949.1\|66436_74536_+	PblB	A0A1S5SD51	Streptococcus_phage	0.0e+00	100.0
VFI18957.1\|74532_74649_+	phage protein	A0A1S5SCF0	Streptococcus_phage	4.0e-12	100.0
VFI18965.1\|74629_74833_+	phage protein	X2KU40	Streptococcus_phage	1.1e-25	100.0
VFI18973.1\|74835_75186_+	phage protein	A0A1S5SD29	Streptococcus_phage	6.2e-64	100.0
VFI18982.1\|75195_75612_+\|holin	putative holin 1	A0A1S5SCE8	Streptococcus_phage	1.9e-67	100.0
VFI18990.1\|75615_75951_+\|holin	phage holin, LL-H family	A0A1S5SD41	Streptococcus_phage	1.5e-51	100.0
VFI18998.1\|75950_76907_+	autolysin	A0A1S5SD25	Streptococcus_phage	7.9e-162	100.0
VFI19006.1\|77176_77356_-	DNA-binding protein	Q3BLW4	Phage_SK137	3.5e-23	96.6
VFI19014.1\|77357_77654_-	Uncharacterised protein	C5J952	Streptococcus_phage	9.0e-16	91.8
VFI19022.1\|77928_78396_+	cytidine/deoxycytidylate deaminase	NA	NA	NA	NA
77823:77843	attR	NA	NA	NA	NA
VFI19030.1\|78581_79025_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	Q2WG49	Clostridium_botulinum_D_phage	2.1e-29	47.3

DBSCAN-SWA_2

94420 : 105876

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI19186.1\|94420_96574_+	competence factor transporting ATP-binding protein/permease ComA	W8CYL7	Bacillus_phage	2.7e-45	28.2
VFI19194.1\|96586_97936_+	competence factor transport protein ComB	NA	NA	NA	NA
VFI19202.1\|98105_98813_+	phosphoribosylaminoimidazole-succinocarboxamide synthetase	A0A1D8KNF0	Synechococcus_phage	1.3e-41	39.2
VFI19210.1\|99014_102740_+	phosphoribosylformylglycinamidine synthase II (FGAM synthetase)	A6N228	Microbacterium_phage	5.6e-38	25.9
VFI19218.1\|102832_104275_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.7e-55	35.1
VFI19226.1\|104311_105334_+	phosphoribosylaminoimidazole synthetase	A0A1D7SE90	Cyanophage	1.2e-64	43.9
VFI19234.1\|105330_105876_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.2e-23	34.4

DBSCAN-SWA_3

156510 : 167658

Streptococcus_phage(75.0%)

bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI19619.1\|156510_156798_+\|bacteriocin	bacteriocin, putative	NA	NA	NA	NA
VFI19627.1\|156849_158958_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VFI19635.1\|158954_159596_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
VFI19644.1\|159802_160609_+	amino acid ABC transporter periplasmic amino acid-binding protein	NA	NA	NA	NA
VFI19646.1\|160625_161045_+	argininosuccinate synthase, truncation	NA	NA	NA	NA
VFI19654.1\|161333_161861_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	5.4e-88	94.9
VFI19662.1\|161857_162145_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.8e-22	68.2
VFI19670.1\|162141_162660_-\|transposase	IS1167 transposase	A0A1S5SBP9	Streptococcus_phage	4.2e-77	91.1
VFI19678.1\|163569_163734_+	Membrane protein	NA	NA	NA	NA
VFI19686.1\|163900_164281_+	Membrane protein	NA	NA	NA	NA
VFI19695.1\|164697_165546_-	helix-turn-helix domain protein	NA	NA	NA	NA
VFI19704.1\|166011_166350_+	transporter truncation	NA	NA	NA	NA
VFI19712.1\|166443_166821_+	Uncharacterised protein	NA	NA	NA	NA
VFI19720.1\|166974_167187_+	Membrane protein	NA	NA	NA	NA
VFI19728.1\|167559_167658_+\|bacteriocin	putative bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_4

173720 : 220286

Streptococcus_phage(57.14%)

protease,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI19784.1\|173720_173918_+\|bacteriocin	putative bacteriocin	NA	NA	NA	NA
VFI19792.1\|174374_174665_+	Lmo2277 protein	M1Q0Z8	Streptococcus_phage	3.8e-19	50.0
VFI19800.1\|174633_174879_+	membrane associated protein	M1Q0Z8	Streptococcus_phage	1.7e-15	57.6
VFI19809.1\|175164_177090_+	surface protein PspA	NA	NA	NA	NA
VFI19817.1\|177490_178612_+\|tRNA	tRNA-specific 2-thiouridylase MnmA	NA	NA	NA	NA
VFI19825.1\|178752_179208_+	mutT/nudix family protein	NA	NA	NA	NA
VFI19834.1\|179217_181131_+\|tRNA	tRNA uridine 5-carboxymethylaminomethyl modification protein GidA	NA	NA	NA	NA
VFI19843.1\|181325_183005_-	metallo-beta-lactamase superfamily protein 1	NA	NA	NA	NA
VFI19852.1\|183006_183240_-	transcriptional regulator	NA	NA	NA	NA
VFI19860.1\|183519_183627_+	Uncharacterised protein	NA	NA	NA	NA
VFI19868.1\|184057_184210_-\|bacteriocin	bacteriocin-type signal sequence domain-containing protein	NA	NA	NA	NA
VFI19876.1\|184211_184397_-	excreted peptide	NA	NA	NA	NA
VFI19885.1\|184575_185259_+	molecular chaperone	NA	NA	NA	NA
VFI19893.1\|185255_185693_+	acetyltransferase	NA	NA	NA	NA
VFI19902.1\|185682_186693_+	O-sialoglycoprotein endopeptidase	NA	NA	NA	NA
VFI19908.1\|186732_187119_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.4e-45	72.4
VFI19917.1\|187109_188039_-\|transposase	IS1193, transposase, ISL3 family	A0A1S5SBP9	Streptococcus_phage	2.9e-92	63.6
VFI19925.1\|189308_189863_+	glycosyltransferase involved exopolysaccharide (EPS) synthesis	NA	NA	NA	NA
VFI19933.1\|190071_190452_+	glycosyl transferase family protein	NA	NA	NA	NA
VFI19941.1\|190553_191429_+	glycosyltransferase	NA	NA	NA	NA
VFI19949.1\|191438_193055_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	3.0e-28	36.0
VFI19957.1\|193074_193221_+	Uncharacterised protein	NA	NA	NA	NA
VFI19965.1\|193755_194505_+	N-acetylglucosaminylphosphatidylinositol deacetylase superfamily	NA	NA	NA	NA
VFI19972.1\|194517_194670_+	UDP-glucose 6-dehydrogenase	NA	NA	NA	NA
VFI19981.1\|194941_195559_+	UDP-glucose 6-dehydrogenase	M1IJ73	Paramecium_bursaria_Chlorella_virus	2.9e-48	48.0
VFI19989.1\|196075_196939_+	transcriptional regulator	NA	NA	NA	NA
VFI19996.1\|197229_197427_+	Uncharacterised protein	NA	NA	NA	NA
VFI20004.1\|197494_198160_+\|protease	putative metal-dependent membrane protease	NA	NA	NA	NA
VFI20012.1\|198231_199458_+	transporter, major facilitator family protein	NA	NA	NA	NA
VFI20020.1\|199691_199931_-	chlorohydrolase	NA	NA	NA	NA
VFI20030.1\|200001_200658_+	branched-chain amino acid permease	NA	NA	NA	NA
VFI20034.1\|200647_200857_+	transmembrane protein	NA	NA	NA	NA
VFI20042.1\|201074_201905_+	ABC transporter substrate-binding lipoprotein	NA	NA	NA	NA
VFI20051.1\|202058_202913_+	ABC transporter substrate-binding lipoprotein	NA	NA	NA	NA
VFI20060.1\|203012_204386_+	deacylase	NA	NA	NA	NA
VFI20068.1\|204378_205440_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.7e-29	35.7
VFI20071.1\|205441_206134_+	ABC transporter permease	NA	NA	NA	NA
VFI20080.1\|206162_206732_-	permease	NA	NA	NA	NA
VFI20088.1\|206866_207481_+	putative integral membrane protein	NA	NA	NA	NA
VFI20096.1\|207446_209129_+	sensor histidine kinase	NA	NA	NA	NA
VFI20105.1\|209140_210427_+	response regulator	NA	NA	NA	NA
VFI20113.1\|210478_211012_+	major facilitator superfamily permease	NA	NA	NA	NA
VFI20121.1\|211089_211560_+	flavoprotein NrdI	NA	NA	NA	NA
VFI20135.1\|211852_213115_-	Nramp family metal ion transporter	NA	NA	NA	NA
VFI20141.1\|213424_213883_-	integral membrane protein	NA	NA	NA	NA
VFI20149.1\|213879_214320_-	response regulator	NA	NA	NA	NA
VFI20157.1\|214903_215770_+	transcriptional regulator	NA	NA	NA	NA
VFI20165.1\|215919_216054_+	Uncharacterised protein	NA	NA	NA	NA
VFI20173.1\|216492_217923_+	Uncharacterised protein	NA	NA	NA	NA
VFI20181.1\|217919_219095_+	transporter, major facilitator family	NA	NA	NA	NA
VFI20189.1\|219228_219597_-\|transposase	IS1198 transposase	NA	NA	NA	NA
VFI20196.1\|219927_220122_-\|transposase	IS5 family transposase	NA	NA	NA	NA
VFI20204.1\|220118_220286_-\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

322041 : 489708

163

Streptococcus_phage(22.58%)

holin,protease,tRNA,transposase,integrase

attL 418617:418634|attR 428402:428419

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI21079.1\|322041_322749_+\|protease	metal-dependent CAAX amino terminal membrane protease	NA	NA	NA	NA
VFI21087.1\|322977_323925_+	dihydropteroate synthase	NA	NA	NA	NA
VFI21096.1\|323926_325249_+	dihydrofolate synthetase	NA	NA	NA	NA
VFI21104.1\|325229_325784_+	GTP cyclohydrolase	E7DN69	Pneumococcus_phage	9.8e-40	44.3
VFI21112.1\|325826_326639_+	bifunctional folate synthesis protein	NA	NA	NA	NA
VFI21120.1\|326683_327001_-	Staphylococcal protein of uncharacterised function (DUF960)	NA	NA	NA	NA
VFI21128.1\|327357_327804_+	50S ribosomal protein L13	NA	NA	NA	NA
VFI21136.1\|327822_328215_+	SSU ribosomal protein S9p (S16e)	NA	NA	NA	NA
VFI21144.1\|328927_329266_+	antibiotic biosynthesis monooxygenase subfamily protein	NA	NA	NA	NA
VFI21152.1\|329455_330892_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.7e-27	25.4
VFI21155.1\|330943_331183_+	glutathione synthetase	NA	NA	NA	NA
VFI21164.1\|331312_331627_+	PTS system cellobiose transporter subunit IIB	NA	NA	NA	NA
VFI21168.1\|331750_333724_+	PTS system transporter subunit IIB	NA	NA	NA	NA
VFI21176.1\|333733_334048_+	lichenan-specific phosphotransferase EIIA component	NA	NA	NA	NA
VFI21184.1\|334078_334585_+	PTS transporter	NA	NA	NA	NA
VFI21193.1\|334664_336011_+	PTS system transporter subunit IIC	NA	NA	NA	NA
VFI21202.1\|336918_339132_+	glycosyl hydrolase, family 31	NA	NA	NA	NA
VFI21210.1\|339353_339830_-	gluthatione peroxidase	NA	NA	NA	NA
VFI21218.1\|340052_343256_+	hyaluronidase	NA	NA	NA	NA
VFI21225.1\|343493_344246_-\|transposase	putative transposase	NA	NA	NA	NA
VFI21232.1\|344238_344784_-\|transposase	putative transposase	NA	NA	NA	NA
VFI21239.1\|345331_345547_+\|transposase	truncated IS200 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-07	38.2
VFI21246.1\|345922_346552_-	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA
VFI21253.1\|346561_347563_-	carbohydrate kinase, PfkB family	NA	NA	NA	NA
VFI21260.1\|347593_348235_-	galactose-6-phosphate isomerase subunit LacB	NA	NA	NA	NA
VFI21267.1\|348253_349069_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
VFI21274.1\|349340_349775_+	PTS system sugar-specific transporter subunit EII	NA	NA	NA	NA
VFI21282.1\|349786_350977_+	glucuronyl hydrolase	NA	NA	NA	NA
VFI21289.1\|350987_351479_+	N-acetylgalactosamine-specific phosphotransferase EIIB	NA	NA	NA	NA
VFI21296.1\|351493_352273_+	PTS system, N-acetylgalactosamine-specific IIC component	NA	NA	NA	NA
VFI21303.1\|352259_353078_+	PTS system transporter subunit IID	NA	NA	NA	NA
VFI21310.1\|353077_353371_+	preprotein translocase subunit YajC	NA	NA	NA	NA
VFI21317.1\|353392_355294_+	oligohyaluronate lyase	NA	NA	NA	NA
VFI21324.1\|355353_356355_+	sugar binding transcriptional regulator RegR	NA	NA	NA	NA
VFI21331.1\|356464_356800_-	membrane protein	NA	NA	NA	NA
VFI21338.1\|356810_357053_-	Uncharacterised protein	NA	NA	NA	NA
VFI21345.1\|357063_357318_-	Uncharacterised protein	NA	NA	NA	NA
VFI21352.1\|357325_357607_-	membrane protein	NA	NA	NA	NA
VFI21359.1\|357622_357817_-	transcriptional regulator	I3VYZ1	Thermoanaerobacterium_phage	7.2e-06	42.6
VFI21366.1\|357982_358933_+	S-adenosyl-methyltransferase mraW	NA	NA	NA	NA
VFI21373.1\|358944_359262_+	cell division protein FtsL	NA	NA	NA	NA
VFI21381.1\|359265_361518_+	penicillin-binding protein 2X	NA	NA	NA	NA
VFI21388.1\|361519_362500_+	UDP-phosphate-UDP-MurNAc-pentapeptide phospho-MurNAc-pentapeptide transferase	NA	NA	NA	NA
VFI21394.1\|363094_365200_+	Group II intron maturase	H6X3M6	Enterobacteria_phage	1.4e-115	37.2
VFI21400.1\|365495_365978_-	S-ribosylhomocysteinase	NA	NA	NA	NA
VFI21407.1\|366072_367557_-\|protease	ATP-dependent Zn protease	NA	NA	NA	NA
VFI21414.1\|367709_369320_+	glucan 1,6-alpha-glucosidase	NA	NA	NA	NA
VFI21421.1\|369419_369761_-\|transposase	transposase OrfB	A0A0C5AEA5	Paenibacillus_phage	1.4e-15	43.6
VFI21428.1\|369775_370258_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	5.0e-32	52.1
VFI21435.1\|370233_370770_-\|transposase	transposase	NA	NA	NA	NA
VFI21442.1\|370838_371789_-\|transposase	transposase	A0A146ICT8	Staphylococcus_phage	5.2e-49	43.9
VFI21449.1\|371953_373006_-\|transposase	transposase for insertion sequence	NA	NA	NA	NA
VFI21456.1\|373182_374628_+	capsular polysaccharide biosynthesis protein Cps14A	A0A1X9I5X1	Streptococcus_phage	1.2e-126	57.9
VFI21463.1\|374629_375361_+	tyrosine-protein phosphatase CpsB	NA	NA	NA	NA
VFI21470.1\|375369_376062_+	capsular polysaccharide biosynthesis protein Cap5A	A0A1X9I5E1	Streptococcus_phage	4.6e-55	53.3
VFI21477.1\|376071_376752_+	tyrosine-protein kinase Wze	A0A1X9I5D6	Streptococcus_phage	6.8e-75	61.2
VFI21484.1\|376766_378134_+	galactosyl transferase CpsE	NA	NA	NA	NA
VFI21491.1\|378262_379207_+	putative galactosyl transferase	A0A2P0VP84	Tetraselmis_virus	4.9e-07	25.4
VFI21498.1\|379306_379801_+	Cps6bQ	NA	NA	NA	NA
VFI21506.1\|379787_380507_+	WciO	NA	NA	NA	NA
VFI21513.1\|380509_381496_+	rhamnosyl transferase Cps6bS	NA	NA	NA	NA
VFI21520.1\|381495_382839_+	oligosaccharide repeat unit polymerase Wzy	NA	NA	NA	NA
VFI21527.1\|382972_384385_+	Wzx	NA	NA	NA	NA
VFI21534.1\|384873_385743_+	glucose-1-phosphate thymidylyltransferase	K7QKA7	Escherichia_phage	1.3e-102	64.6
VFI21541.1\|385743_386340_+	dTDP-4-dehydrorhamnose 3,5-epimerase	H9NC63	Sphingomonas_phage	5.1e-10	33.1
VFI21548.1\|386349_387399_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.3e-72	44.5
VFI21555.1\|387464_388316_+	dTDP-4-keto-L-rhamnose reductase	A0A291LA50	Escherichia_phage	8.6e-27	35.8
VFI21562.1\|388514_388826_+\|transposase	transposase	NA	NA	NA	NA
VFI21569.1\|389775_391758_+	oligopeptide ABC transporter oligopeptide-binding protein AliA	NA	NA	NA	NA
VFI21576.1\|392058_397371_+	endo-alpha-N-acetylgalactosaminidase	NA	NA	NA	NA
VFI21583.1\|397537_399697_-	penicillin-binding protein 1A	NA	NA	NA	NA
VFI21590.1\|399693_400290_-	recombination protein U	A0A1L2JY30	Aeribacillus_phage	1.5e-17	33.9
VFI21597.1\|400355_400883_+	UPF0398 protein SSU05	NA	NA	NA	NA
VFI21604.1\|400952_401282_+	cell division initiation protein	NA	NA	NA	NA
VFI21611.1\|401767_402925_+	N-6 adenine-specific DNA methylase	NA	NA	NA	NA
VFI21619.1\|402937_404332_+	Holliday junction-specific endonuclease	NA	NA	NA	NA
VFI21626.1\|404407_405832_+\|holin	choline binding protein J	M4QQM4	Ostreococcus_lucimarinus_virus	2.1e-41	29.6
VFI21633.1\|405843_406533_+\|holin	choline binding protein J	NA	NA	NA	NA
VFI21640.1\|406631_407654_+\|holin	choline binding protein C	NA	NA	NA	NA
VFI21647.1\|407672_408671_+\|holin	choline binding protein J	NA	NA	NA	NA
VFI21654.1\|408788_410021_-	major facilitator superfamily permease	NA	NA	NA	NA
VFI21661.1\|410063_410888_-	lanthionine synthetase C-like protein	NA	NA	NA	NA
VFI21669.1\|411550_411808_+\|holin	choline binding protein C	NA	NA	NA	NA
VFI21676.1\|412002_412881_+	mevalonate kinase	NA	NA	NA	NA
VFI21683.1\|412862_413816_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
VFI21692.1\|413802_414810_+	phosphomevalonate kinase	NA	NA	NA	NA
VFI21699.1\|414793_415804_+	isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2	NA	NA	NA	NA
VFI21706.1\|415881_416580_+	transporter	NA	NA	NA	NA
VFI21713.1\|416576_417572_+	histidine kinase	NA	NA	NA	NA
VFI21720.1\|417585_418218_+	response regulator	NA	NA	NA	NA
VFI21727.1\|418218_418365_+	putative DNA alkylation repair enzyme	NA	NA	NA	NA
418617:418634	attL	NA	NA	NA	NA
VFI21734.1\|419137_419377_+	V8-like Glu-specific endopeptidase	NA	NA	NA	NA
VFI21741.1\|419373_420030_+\|holin	choline binding protein G	NA	NA	NA	NA
VFI21746.1\|419989_420283_+\|holin	choline binding protein G	NA	NA	NA	NA
VFI21753.1\|420301_421324_+\|holin	choline binding protein F	NA	NA	NA	NA
VFI21760.1\|421453_422287_-\|integrase	integrase core domain-containing protein	A0A1B1P773	Bacillus_phage	5.1e-56	47.4
VFI21768.1\|422286_422454_-\|transposase	transposase	NA	NA	NA	NA
VFI21775.1\|422589_422859_-\|transposase	degenerate transposase (Orf1)	NA	NA	NA	NA
VFI21782.1\|423010_424780_+	PTS system mannitol-specific transporter subunit EIIBC	NA	NA	NA	NA
VFI21790.1\|424803_426759_+	putative transcriptional regulator MtlR	NA	NA	NA	NA
VFI21797.1\|426760_427198_+	mannitol-specific phosphotransferase EIIA	NA	NA	NA	NA
VFI21804.1\|427259_428396_+	mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA
VFI21812.1\|429181_430465_+	FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)	NA	NA	NA	NA
428402:428419	attR	NA	NA	NA	NA
VFI21819.1\|430512_432879_-	recombinase D	A0A0K2FLP8	Brevibacillus_phage	8.2e-59	27.1
VFI21826.1\|433006_433621_-	signal peptidase I	NA	NA	NA	NA
VFI21833.1\|433624_434506_-	ribonuclease HIII	NA	NA	NA	NA
VFI21840.1\|434592_434895_+\|tRNA	seryl-tRNA synthetase	NA	NA	NA	NA
VFI21847.1\|434891_435440_+	CvpA family protein	NA	NA	NA	NA
VFI21854.1\|435546_436092_+\|transposase	putative transposase	NA	NA	NA	NA
VFI21861.1\|436084_436837_+\|transposase	putative transposase	NA	NA	NA	NA
VFI21868.1\|437062_439399_+	mismatch repair ATPase (MutS family)	Q94M10	Lactobacillus_phage	1.8e-21	55.1
VFI21875.1\|439741_441064_+	Na+/alanine symporter	NA	NA	NA	NA
VFI21882.1\|441281_441830_+	macrophage infectivity potentiator protein	NA	NA	NA	NA
VFI21890.1\|441939_442839_+	exfoliative toxin	NA	NA	NA	NA
VFI21897.1\|442919_443372_-\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.6e-42	60.8
VFI21904.1\|443349_444138_-\|tRNA	seryl-tRNA synthetase	NA	NA	NA	NA
VFI21908.1\|444351_444723_-	ManO	NA	NA	NA	NA
VFI21915.1\|444725_446090_-	aspartate kinase	NA	NA	NA	NA
VFI21922.1\|446414_447200_+	enoyl-CoA hydratase	NA	NA	NA	NA
VFI21929.1\|447293_447728_+	transcription regulator, MarR family	NA	NA	NA	NA
VFI21936.1\|447727_448702_+	3-oxoacyl-ACP synthase III	NA	NA	NA	NA
VFI21943.1\|448761_448986_+	acyl carrier protein	NA	NA	NA	NA
VFI21950.1\|449104_450079_+	putative enoyl-(acyl-carrier-protein) reductase II	NA	NA	NA	NA
VFI21953.1\|450071_450992_+	ACP S-malonyltransferase	NA	NA	NA	NA
VFI21960.1\|451025_451757_+	3-oxoacyl-ACP reductase	F2NZ40	Diadromus_pulchellus_ascovirus	2.2e-15	30.9
VFI21967.1\|451778_453014_+	3-oxoacyl-(acyl carrier protein) synthase II	NA	NA	NA	NA
VFI21974.1\|453016_453502_+	acetyl-CoA carboxylase	NA	NA	NA	NA
VFI21981.1\|453498_453921_+	(3R)-hydroxymyristoyl-ACP dehydratase	NA	NA	NA	NA
VFI21988.1\|453932_455300_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
VFI21996.1\|455336_456203_+	acetyl-CoA carboxylase beta subunit	NA	NA	NA	NA
VFI22003.1\|456199_456967_+	acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit	NA	NA	NA	NA
VFI22010.1\|457229_457415_+	excreted peptide	NA	NA	NA	NA
VFI22017.1\|457471_458221_+\|protease	caax amino protease family protein	NA	NA	NA	NA
VFI22024.1\|458334_459117_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.1e-113	91.5
VFI22031.1\|459113_459641_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	7.5e-90	96.6
VFI22039.1\|459675_460098_-	transcription antitermination protein NusB	NA	NA	NA	NA
VFI22046.1\|460090_460480_-	general stress protein, Gls24 family	NA	NA	NA	NA
VFI22053.1\|460501_461062_-	Translation elongation factor P	NA	NA	NA	NA
VFI22060.1\|461439_462474_-	L-iditol 2-dehydrogenase	A0A2K9L7I1	Tupanvirus	2.3e-10	24.4
VFI22067.1\|462593_464036_-\|tRNA	glutamyl tRNA-Gln amidotransferase chain B	NA	NA	NA	NA
VFI22074.1\|464035_465502_-\|tRNA	glutamyl-tRNA(Gln) amidotransferase, A subunit	NA	NA	NA	NA
VFI22082.1\|465501_465804_-\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit C	NA	NA	NA	NA
VFI22089.1\|466016_467561_+	regulator of gtfB	A0A1B0RXH7	Streptococcus_phage	1.4e-35	28.5
VFI22093.1\|467988_468186_+	glycosyl transferase, family 8	NA	NA	NA	NA
VFI22104.1\|468588_468777_+	LSU ribosomal protein L28p	NA	NA	NA	NA
VFI22112.1\|468933_469299_+	alkaline shock protein	NA	NA	NA	NA
VFI22119.1\|469301_470969_+	kinase	NA	NA	NA	NA
VFI22126.1\|471169_472870_+	acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.2e-67	32.2
VFI22133.1\|472862_473339_+	acetolactate synthase 3 regulatory subunit	NA	NA	NA	NA
VFI22140.1\|473404_474427_+	ketol-acid reductoisomerase	NA	NA	NA	NA
VFI22147.1\|474533_474770_+	Uncharacterised protein	NA	NA	NA	NA
VFI22154.1\|475007_475364_+	ketol-acid reductoisomerase	NA	NA	NA	NA
VFI22161.1\|475413_476664_+	threonine dehydratase	NA	NA	NA	NA
VFI22168.1\|477534_477750_+	Uncharacterised protein	NA	NA	NA	NA
VFI22176.1\|477858_478599_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-27	38.4
VFI22184.1\|478598_480164_-	ABC transporter-amino acid transport; amino acid-binding protein/permease protein	NA	NA	NA	NA
VFI22191.1\|480301_482191_+	Predicted membrane protein (DUF2207)	NA	NA	NA	NA
VFI22198.1\|482389_483040_-\|transposase	degenerate transposase	NA	NA	NA	NA
VFI22205.1\|483237_483360_-\|transposase	degenerate transposase	NA	NA	NA	NA
VFI22212.1\|483615_484461_+	undecaprenol kinase	NA	NA	NA	NA
VFI22219.1\|484607_485669_-	DNA polymerase IV	NA	NA	NA	NA
VFI22226.1\|486063_488388_+	pyruvate formate-lyase	A0A2P0VNR5	Tetraselmis_virus	7.9e-115	32.9
VFI22233.1\|488445_489708_-\|transposase	IS1167, transposase	A0A1S5SBP9	Streptococcus_phage	1.4e-129	57.6

DBSCAN-SWA_6

501094 : 611620

110

Bacillus_phage(13.64%)

protease,tRNA,bacteriocin,transposase,integrase

attL 485683:485718|attR 556059:556094

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
485683:485718	attL	NA	NA	NA	NA
VFI22289.1\|501094_501856_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.4e-131	92.9
VFI22296.1\|501852_502371_-\|transposase	degenerate transposase	A0A1S5SBP9	Streptococcus_phage	7.0e-80	93.0
VFI22299.1\|502485_502635_-	Uncharacterised protein	NA	NA	NA	NA
VFI22306.1\|502627_502912_-	Uncharacterised protein	NA	NA	NA	NA
VFI22313.1\|503523_503694_-\|transposase	ISSpo8 transposase	NA	NA	NA	NA
VFI22322.1\|504345_505569_-	ROK family protein	NA	NA	NA	NA
VFI22330.1\|505736_507059_+	PTS system cellobiose-specific IIC component	NA	NA	NA	NA
VFI22337.1\|507060_508947_+	Uncharacterised protein	NA	NA	NA	NA
VFI22344.1\|509114_509459_+	lactose-specific phosphotransferase EIIA	NA	NA	NA	NA
VFI22351.1\|509468_510881_+	6-phospho-beta-galactosidase	NA	NA	NA	NA
VFI22356.1\|510949_512629_+	pts system lactose-specific transporter subunit EIIBC	NA	NA	NA	NA
VFI22364.1\|512753_514193_-	potassium uptake protein	NA	NA	NA	NA
VFI22371.1\|514196_515546_-	potassium uptake protein	NA	NA	NA	NA
VFI22378.1\|515734_516583_+	Molybdate/tungstate binding protein	NA	NA	NA	NA
VFI22385.1\|516597_517146_+	protein YdcD	NA	NA	NA	NA
VFI22392.1\|517152_517410_+	N-ethylammeline chlorohydrolase	NA	NA	NA	NA
VFI22399.1\|517511_519194_+	cobalt ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-19	34.9
VFI22406.1\|519178_520009_+	ABC transporter permease	NA	NA	NA	NA
VFI22414.1\|520201_520705_+	RNA methyltransferase	NA	NA	NA	NA
VFI22421.1\|521157_521721_+	riboflavin transporter	NA	NA	NA	NA
VFI22429.1\|521710_522361_+	phosphatase	NA	NA	NA	NA
VFI22436.1\|522388_522778_+	putative histone acetyltransferase	NA	NA	NA	NA
VFI22443.1\|522782_523232_+	sortase-like acyltransferase	NA	NA	NA	NA
VFI22451.1\|523359_523947_+	DNA-dependent RNA Polymerase, delta subunit (RNAP delta factor)	NA	NA	NA	NA
VFI22458.1\|524336_525944_+	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.9e-142	47.0
VFI22465.1\|526502_528134_-	sodium-dependent phosphate transporter	NA	NA	NA	NA
VFI22472.1\|528422_533363_+	endo-beta-N-acetylglucosaminidase	NA	NA	NA	NA
VFI22480.1\|533452_534649_+	phosphoglycerate kinase	NA	NA	NA	NA
VFI22487.1\|534784_535312_+	signal peptide	NA	NA	NA	NA
VFI22494.1\|535388_535745_+	transcriptional repressor of the glutamine synthetase gene	NA	NA	NA	NA
VFI22501.1\|535781_537128_+	glutamate-ammonia ligase	NA	NA	NA	NA
VFI22508.1\|537307_537457_+	Uncharacterised protein	NA	NA	NA	NA
VFI22515.1\|537908_539180_+	type I restriction-modification system M protein	A0A1V0SKS6	Klosneuvirus	6.9e-12	29.2
VFI22518.1\|539133_539742_-	putative type I restriction-modification system S protein	A0A1V0SLK8	Klosneuvirus	8.6e-13	30.1
VFI22525.1\|539752_540550_-\|integrase	integrase/recombinase, phage integrase family	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	28.7
VFI22532.1\|540606_542175_-	type I site-specific deoxyribonuclease chain S	NA	NA	NA	NA
VFI22540.1\|542174_543638_-	type I restriction-modification system M protein	NA	NA	NA	NA
VFI22548.1\|543650_545984_-	type I restriction-modification system, R subunit	Q5YA94	Bacillus_phage	5.8e-25	27.6
VFI22555.1\|546355_546556_+	Uncharacterised protein	NA	NA	NA	NA
VFI22560.1\|546590_547100_+	Protein of uncharacterised function (DUF2812)	NA	NA	NA	NA
VFI22567.1\|547263_548298_+	heat-inducible transcription repressor	NA	NA	NA	NA
VFI22574.1\|548324_548849_+	heat shock protein GrpE	NA	NA	NA	NA
VFI22581.1\|549328_551152_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.0e-133	47.2
VFI22588.1\|551153_551510_+	Uncharacterised protein	NA	NA	NA	NA
VFI22593.1\|551911_553048_+	dnaJ protein, Heat-shock protein (activation of DnaK)	E3T4P7	Cafeteria_roenbergensis_virus	2.4e-24	31.3
VFI22600.1\|553414_553702_-	Uncharacterised protein	NA	NA	NA	NA
VFI22607.1\|553711_554122_-	protein hit	B5LJ12	Mycobacterium_phage	4.4e-05	31.6
VFI22615.1\|554189_554921_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.0e-25	28.6
VFI22622.1\|554917_555967_+	ABC transporter permease	NA	NA	NA	NA
VFI22627.1\|556134_556464_-	BlpT protein, fusion	NA	NA	NA	NA
556059:556094	attR	NA	NA	NA	NA
VFI22634.1\|556740_557079_+	regulatory protein, single domain response regulator	NA	NA	NA	NA
VFI22640.1\|557083_557821_+	response regulator	NA	NA	NA	NA
VFI22647.1\|557834_559175_+	histidine kinase	NA	NA	NA	NA
VFI22655.1\|559218_559374_-	double glycine cleavage site bacteriolysin superfamily	NA	NA	NA	NA
VFI22662.1\|559430_560792_-	BlpC ABC transporter	NA	NA	NA	NA
VFI22672.1\|560802_562956_-	competence factor transporting ATP-binding protein/permease ComA	W8CYL7	Bacillus_phage	2.4e-41	27.7
VFI22679.1\|563236_563440_+\|bacteriocin	bacteriocin BlpPQ	NA	NA	NA	NA
VFI22686.1\|563757_563961_+	Uncharacterised protein	NA	NA	NA	NA
VFI22693.1\|564534_564699_+	putative immunity protein	NA	NA	NA	NA
VFI22700.1\|564924_565152_+\|transposase	degenerate transposase (orf1)	NA	NA	NA	NA
VFI22707.1\|565306_565849_+\|transposase	transposase	NA	NA	NA	NA
VFI22716.1\|565920_566175_+	BlpM	NA	NA	NA	NA
VFI22723.1\|566190_566394_+	blpN protein	NA	NA	NA	NA
VFI22730.1\|566649_566871_+\|bacteriocin	putative bacteriocin BlpI	NA	NA	NA	NA
VFI22736.1\|566902_567592_+\|protease	metal-dependent CAAX amino terminal membrane protease	NA	NA	NA	NA
VFI22743.1\|567633_567867_+	immunity protein BlpZ	NA	NA	NA	NA
VFI22750.1\|568017_568629_+\|protease	CAAX amino terminal protease family protein	NA	NA	NA	NA
VFI22757.1\|568789_569584_+	aminoglycoside phosphotransferase	NA	NA	NA	NA
VFI22761.1\|569580_570216_+\|tRNA	tRNA (guanine-N(7)-)-methyltransferase	NA	NA	NA	NA
VFI22769.1\|570341_570821_+	SP14.3 protein	NA	NA	NA	NA
VFI22776.1\|570876_572001_+	transcription elongation factor NusA	NA	NA	NA	NA
VFI22783.1\|572022_572316_+	cytosolic protein YlxR	NA	NA	NA	NA
VFI22790.1\|572308_572608_+	L7A family ribosomal protein	NA	NA	NA	NA
VFI22797.1\|572624_575417_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.3e-19	22.9
VFI22804.1\|575667_576018_+	ribosome-binding factor A	NA	NA	NA	NA
VFI22811.1\|576296_577076_+	ABC transporter ATPase	NA	NA	NA	NA
VFI22816.1\|577077_577260_+	Uncharacterised protein	NA	NA	NA	NA
VFI22823.1\|577256_577385_+	Uncharacterised protein	NA	NA	NA	NA
VFI22830.1\|577524_577722_-	chlorohydrolase	NA	NA	NA	NA
VFI22832.1\|577752_577986_+	Domain of uncharacterised function (DUF1858)	NA	NA	NA	NA
VFI22839.1\|577985_579320_+	hemerythrin HHE cation binding domain subfamily	NA	NA	NA	NA
VFI22846.1\|579329_579584_+	aldose 1-epimerase	NA	NA	NA	NA
VFI22853.1\|579679_580075_+	Helicase	NA	NA	NA	NA
VFI22860.1\|580487_580937_+	conserved protein/domain typically associated with flavoprotein oxygenase, Dim6/ntab family	NA	NA	NA	NA
VFI22868.1\|580923_581481_+	acetyltransferase, gnat family	NA	NA	NA	NA
VFI22875.1\|581482_582445_+	putative uncharacterized protein (hydrophilic)	NA	NA	NA	NA
VFI22882.1\|582456_585108_+\|tRNA	valyl-tRNA synthetase	A0A1V0S951	Catovirus	3.7e-153	41.5
VFI22889.1\|585177_585933_+	Zn-finger	NA	NA	NA	NA
VFI22896.1\|586217_587021_+	Fic protein family	NA	NA	NA	NA
VFI22903.1\|587136_587322_-\|transposase	IS3-Spn1 transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.5e-08	46.7
VFI22910.1\|587318_587624_-\|transposase	degenerate transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.5e-15	51.1
VFI22917.1\|587685_587958_-\|transposase	IS3-Spn1 transposase	A0A1B1P773	Bacillus_phage	1.7e-13	49.4
VFI22924.1\|588183_588453_-\|transposase	transposase InsK for insertion sequence	NA	NA	NA	NA
VFI22931.1\|588642_589908_+	DNA or RNA helicases of superfamily II	NA	NA	NA	NA
VFI22938.1\|590123_591320_+	helicase	I3UKD0	Ostreococcus_lucimarinus_virus	1.8e-17	28.4
VFI22951.1\|591619_592459_+	transcription antiterminator LicT	NA	NA	NA	NA
VFI22958.1\|592476_594315_+	PTS system beta-glucoside-specific transporter subunit EIIABC	NA	NA	NA	NA
VFI22965.1\|594327_595743_+	beta-glucosidase	A0A0B5JD41	Pandoravirus	1.5e-23	23.9
VFI22972.1\|596224_597271_+\|tRNA	phenylalanyl-tRNA synthetase, alpha chain	A0A2I2L4E3	Orpheovirus	1.6e-27	32.8
VFI22979.1\|597270_597780_+	acetyltransferase, GNAT family	NA	NA	NA	NA
VFI22986.1\|597856_600259_+\|tRNA	phenylalanyl-tRNA synthetase, beta chain	NA	NA	NA	NA
VFI22993.1\|600326_601328_-	endonuclease/exonuclease/phosphatase family	NA	NA	NA	NA
VFI22999.1\|601483_601978_+\|transposase	transposase	NA	NA	NA	NA
VFI23007.1\|602125_602323_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
VFI23014.1\|602583_604833_+	5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	NA	NA	NA	NA
VFI23021.1\|604896_605763_+	5,10-methylenetetrahydrofolate reductase	NA	NA	NA	NA
VFI23028.1\|606447_608661_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
VFI23036.1\|608676_609294_+	serine O-acetyltransferase	NA	NA	NA	NA
VFI23043.1\|609305_610190_+	GNAT family acetyltransferase	NA	NA	NA	NA
VFI23050.1\|610276_611620_+\|tRNA	cysteinyl-tRNA synthetase	M1PG92	Moumouvirus	1.2e-46	35.8

DBSCAN-SWA_7

652650 : 706603

Staphylococcus_prophage(25.0%)

protease,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI23335.1\|652650_659082_+\|protease	serine protease	NA	NA	NA	NA
VFI23342.1\|659708_660185_+	PTS system transporter subunit IIA	NA	NA	NA	NA
VFI23349.1\|660222_660528_+	PTS system IIB component (galactitol/fructose specific)	NA	NA	NA	NA
VFI23356.1\|660575_662051_+	PTS system galactitol-specific family transporter subunit IIC	NA	NA	NA	NA
VFI23363.1\|662076_662268_+	chlorohydrolase	NA	NA	NA	NA
VFI23371.1\|662355_669057_+	beta-galactosidase	NA	NA	NA	NA
VFI23378.1\|669304_669928_-\|transposase	transposase	Q9MBP7	Staphylococcus_prophage	2.3e-05	40.0
VFI23385.1\|669915_670161_-\|transposase	transposase	Q9MBP7	Staphylococcus_prophage	1.0e-12	44.9
VFI23392.1\|670371_670731_-	integral membrane protein	NA	NA	NA	NA
VFI23399.1\|670822_671023_+	radical SAM superfamily protein (pseudogene)	NA	NA	NA	NA
VFI23406.1\|671332_671779_+	putative Fe-S oxidoreductase	A0A2H4PQV5	Staphylococcus_phage	3.8e-34	50.4
VFI23411.1\|671762_672320_+	SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	1.1e-33	41.4
VFI23418.1\|672312_672567_+	Uncharacterised protein	NA	NA	NA	NA
VFI23425.1\|672578_674633_+	Na+/H+ antiporter	NA	NA	NA	NA
VFI23432.1\|674811_675672_+	ribonuclease BN	NA	NA	NA	NA
VFI23439.1\|675882_676593_+	cytochrome c-type biogenesis protein	NA	NA	NA	NA
VFI23446.1\|676612_677179_+	thioredoxin	NA	NA	NA	NA
VFI23453.1\|677189_678302_+	peptide methionine sulfoxide reductase	NA	NA	NA	NA
VFI23460.1\|678524_679262_+	DNA-binding response regulator	NA	NA	NA	NA
VFI23467.1\|679258_680950_+	histidine kinase	Q9EYF3	Enterobacteria_phage	9.4e-25	32.7
VFI23474.1\|681065_681629_+	UPF0340 protein SSU05	NA	NA	NA	NA
VFI23481.1\|681650_687560_+\|protease	zinc metalloprotease ZmpB	NA	NA	NA	NA
VFI23488.1\|687620_689342_+	chorismate binding enzyme para-aminobenzoate synthetase	A0A0B5J984	Pandoravirus	9.8e-38	29.7
VFI23495.1\|689461_690988_+	pneumococcal surface protein	NA	NA	NA	NA
VFI23502.1\|691152_692001_+	pneumococcal surface protein	NA	NA	NA	NA
VFI23509.1\|692127_693087_+	glucokinase	NA	NA	NA	NA
VFI23516.1\|693183_694023_+	thymidylate synthase	U5J9N5	Bacillus_phage	9.5e-87	55.4
VFI23522.1\|694070_694241_-	putative uncharacterized protein ORF 3	NA	NA	NA	NA
VFI23528.1\|694361_695246_+\|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	NA	NA	NA	NA
VFI23534.1\|695238_696477_+	GTP-binding protein HflX	NA	NA	NA	NA
VFI23540.1\|696469_697093_+	cystathionine beta-lyase	NA	NA	NA	NA
VFI23546.1\|697107_698037_+	hydrolase	NA	NA	NA	NA
VFI23552.1\|698057_698813_+	dehydrogenase	NA	NA	NA	NA
VFI23558.1\|698866_699835_-	transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	1.5e-06	28.9
VFI23564.1\|699838_700108_+	hypothetical cytosolic protein	NA	NA	NA	NA
VFI23570.1\|700107_700488_+	rhodanese family protein	NA	NA	NA	NA
VFI23576.1\|700606_700804_+	Uncharacterised protein	NA	NA	NA	NA
VFI23582.1\|700843_701569_-	ribosomal small subunit pseudouridine synthase A	NA	NA	NA	NA
VFI23588.1\|701730_703572_+	GTP-binding protein TypA	NA	NA	NA	NA
VFI23593.1\|703591_703846_+	membrane protein	NA	NA	NA	NA
VFI23599.1\|704163_704511_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
VFI23605.1\|704581_706603_+\|bacteriocin	bacteriocin-associated integral membrane protein	NA	NA	NA	NA

DBSCAN-SWA_8

719653 : 760579

Bacillus_virus(28.57%)

tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI23713.1\|719653_721144_+\|tRNA	lysyl-tRNA synthetase	A0A1V0SAC0	Catovirus	7.3e-90	39.6
VFI23719.1\|721768_722905_+	L-lactate oxidase	NA	NA	NA	NA
VFI23726.1\|723459_724128_+	transcriptional regulator, TENA/THI-4 family protein	NA	NA	NA	NA
VFI23732.1\|724415_725198_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
VFI23738.1\|725199_725829_+	thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA
VFI23744.1\|726387_726948_+	cobalt ABC transporter permease	NA	NA	NA	NA
VFI23750.1\|726948_728334_+	cobalt or other cation ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.9e-09	25.6
VFI23756.1\|728335_728986_+	cobalt ABC transporter domain-containing protein	NA	NA	NA	NA
VFI23762.1\|728996_729689_+	transcriptional activator TenA, TENA/THI-4 family protein	NA	NA	NA	NA
VFI23768.1\|729693_730218_+	ThiW superfamily protein	NA	NA	NA	NA
VFI23774.1\|730217_731021_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
VFI23780.1\|731013_731646_+	thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA
VFI23786.1\|731854_732661_-	phosphomethylpyrimidine kinase	NA	NA	NA	NA
VFI23792.1\|733026_733422_+	transcriptional repressor	NA	NA	NA	NA
VFI23798.1\|733432_733804_+	Cu2+-exporting ATPase	NA	NA	NA	NA
VFI23804.1\|733813_736057_+	cation transporter E1-E2 family ATPase	A0A218MNH6	uncultured_virus	5.1e-95	37.5
VFI23811.1\|736263_738039_+	putative oxidase	E5EQ70	Micromonas_sp._RCC1109_virus	1.9e-28	23.5
VFI23818.1\|738149_738296_+	glyoxalase family protein	NA	NA	NA	NA
VFI23824.1\|738613_739123_-\|transposase	transposase family protein	NA	NA	NA	NA
VFI23830.1\|739154_739421_-\|transposase	degenerate transposase	NA	NA	NA	NA
VFI23836.1\|739417_739660_-\|transposase	transposase	NA	NA	NA	NA
VFI23842.1\|739724_740021_+	6-phospho-beta-glucosidase AscB	NA	NA	NA	NA
VFI23848.1\|740141_741086_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
VFI23854.1\|741106_742366_-	sodium-dependent transporter	NA	NA	NA	NA
VFI23860.1\|742362_742584_-	sodium-dependent transporter	NA	NA	NA	NA
VFI23866.1\|743026_743434_+	regulator of the multidrug efflux pump PmrA	NA	NA	NA	NA
VFI23871.1\|743582_744335_-\|transposase	putative transposase	NA	NA	NA	NA
VFI23877.1\|744327_744873_-\|transposase	putative transposase	NA	NA	NA	NA
VFI23883.1\|744992_746006_-	3-carboxymuconate cyclase	NA	NA	NA	NA
VFI23889.1\|746149_747316_+	transport protein	NA	NA	NA	NA
VFI23895.1\|747305_748535_+	TPR domain protein	NA	NA	NA	NA
VFI23901.1\|748680_749322_+	amino acid ABC transporter permease	NA	NA	NA	NA
VFI23907.1\|749331_749961_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-28	37.3
VFI23913.1\|749973_750822_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
VFI23919.1\|751099_751447_-\|bacteriocin	thioredoxin, bacteriocin transport accessory protein	NA	NA	NA	NA
VFI23926.1\|751557_753276_-	phosphoglucomutase	A0A1X9I671	Streptococcus_phage	1.5e-272	83.4
VFI23933.1\|753821_754355_+\|transposase	degenerate transposase	NA	NA	NA	NA
VFI23940.1\|754695_754950_+	Uncharacterised protein	NA	NA	NA	NA
VFI23946.1\|755060_756167_+	putative sortase-sorted surface anchored protein (pseudogene)	NA	NA	NA	NA
VFI23951.1\|756124_756646_+	cell wall surface anchor family protein	NA	NA	NA	NA
VFI23957.1\|756869_757739_+	glycerol facilitator-aquaporin	NA	NA	NA	NA
VFI23963.1\|758648_759845_+	elongation factor Tu	A0A076FFS6	Aureococcus_anophage	7.3e-32	29.6
VFI23968.1\|760228_760579_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_9

778806 : 785824

Streptococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI24092.1\|778806_779301_+	acetyltransferase, GNAT family protein	M1PSC3	Streptococcus_phage	1.9e-42	52.1
VFI24098.1\|779300_779831_+	O6-methylguanine-DNA methyltransferase	M1PFU9	Streptococcus_phage	1.4e-46	54.3
VFI24104.1\|779824_780181_+	ArsC family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
VFI24110.1\|780338_781139_+	aspartate/glutamate ABC transporter permease	NA	NA	NA	NA
VFI24115.1\|781138_781882_+	aspartate/glutamate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-29	41.0
VFI24121.1\|781959_782184_+	membrane associated protein	NA	NA	NA	NA
VFI24126.1\|782249_783161_+	thioredoxin reductase	G3MA85	Bacillus_virus	2.9e-89	51.5
VFI24129.1\|783198_783927_-	TrmH family RNA methyltransferase group 3	NA	NA	NA	NA
VFI24135.1\|783971_784583_-	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-16	42.4
VFI24141.1\|785311_785824_+	enzyme of poly-gamma-glutamate biosynthesis	A0A0N9SJ77	Staphylococcus_phage	1.4e-16	32.9

DBSCAN-SWA_10

843483 : 899897

Streptococcus_phage(33.33%)

holin,protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI24524.1\|843483_846102_+\|tRNA	alanyl-tRNA synthetase	A0A1V0SK38	Klosneuvirus	3.7e-60	33.8
VFI24530.1\|846191_847646_-	alpha-amylase	NA	NA	NA	NA
VFI24536.1\|847824_848574_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-28	28.1
VFI24542.1\|848554_850189_+	ABC transporter membrane protein	NA	NA	NA	NA
VFI24548.1\|850875_852039_+	putative SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	2.3e-139	64.3
VFI24553.1\|852035_852713_+	3-dehydroquinate dehydratase, (3-dehydroquinase) (type I DHQase)	W6LP76	Streptococcus_phage	3.9e-83	67.3
VFI24559.1\|852702_853557_+	shikimate 5-dehydrogenase	NA	NA	NA	NA
VFI24568.1\|853575_854643_+	3-dehydroquinate synthase	NA	NA	NA	NA
VFI24574.1\|854652_855819_+	chorismate synthase, (5-enolpyruvylshikimate-3-phosphate phospholyase)	A0A291AU41	Pandoravirus	2.7e-39	35.2
VFI24580.1\|855828_856932_+	prephenate dehydrogenase	NA	NA	NA	NA
VFI24586.1\|856942_857281_+	3-phosphoshikimate 1-carboxyvinyltransferase	A0A1X9I5Y8	Streptococcus_phage	1.2e-24	50.9
VFI24592.1\|857372_858656_+	5-enolpyruvylshikimate-3-phosphate synthase	NA	NA	NA	NA
VFI24598.1\|858648_859125_+	prephenate dehydratase	NA	NA	NA	NA
VFI24604.1\|859121_859970_+	prephenate dehydratase	NA	NA	NA	NA
VFI24610.1\|859966_861241_+	LytR family transcriptional regulator	NA	NA	NA	NA
VFI24616.1\|861528_862365_+\|holin	phosphorylcholine transferase LicD3	NA	NA	NA	NA
VFI24622.1\|862354_863458_+	glycosyl transferase	NA	NA	NA	NA
VFI24628.1\|863459_864446_+	glycosyl transferase	NA	NA	NA	NA
VFI24634.1\|864461_865895_+	Uncharacterised protein	NA	NA	NA	NA
VFI24640.1\|865923_866958_+	Uncharacterised protein	NA	NA	NA	NA
VFI24646.1\|867158_867896_+	adaptor protein	NA	NA	NA	NA
VFI24652.1\|868046_869333_+	homoserine dehydrogenase	NA	NA	NA	NA
VFI24658.1\|869334_870204_+	N-ethylammeline chlorohydrolase	NA	NA	NA	NA
VFI24664.1\|870498_871437_+	bifunctional methionine sulfoxide reductase	NA	NA	NA	NA
VFI24670.1\|871494_873219_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	2.7e-43	27.9
VFI24676.1\|873220_874972_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	1.6e-48	29.9
VFI24683.1\|875066_876623_+	chlorohydrolase	NA	NA	NA	NA
VFI24689.1\|876872_877373_+	50S ribosomal protein L10	NA	NA	NA	NA
VFI24692.1\|877448_877817_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
VFI24698.1\|878003_878591_+\|protease	Tn5253 CAAX amino terminal protease family	NA	NA	NA	NA
VFI24704.1\|878990_879800_+	transcriptional regulator	NA	NA	NA	NA
VFI24711.1\|879804_880506_+	N-acetylmannosamine-6-phosphate epimerase	NA	NA	NA	NA
VFI24717.1\|880530_881448_+	N-acetylneuraminate lyase	NA	NA	NA	NA
VFI24723.1\|883035_883494_+	beta-galactosidase subunit beta	NA	NA	NA	NA
VFI24729.1\|883495_885718_+	sialidase B	NA	NA	NA	NA
VFI24735.1\|885757_886867_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
VFI24741.1\|887023_887914_+	transcriptional regulator	NA	NA	NA	NA
VFI24747.1\|887938_888262_+	Uncharacterised protein	NA	NA	NA	NA
VFI24753.1\|888251_890243_+	V-type H+-ATPase, subunit I	NA	NA	NA	NA
VFI24759.1\|890258_890735_+	V-type H+-ATPase, subunit K	NA	NA	NA	NA
VFI24765.1\|890768_891350_+	V-type H+-ATPase, subunit E	NA	NA	NA	NA
VFI24771.1\|891414_892422_+	V-type H+-ATPase, subunit C	NA	NA	NA	NA
VFI24778.1\|892411_892732_+	V-type H+-ATPase, subunit F	NA	NA	NA	NA
VFI24784.1\|892794_894570_+	V-type ATP synthase subunit A	NA	NA	NA	NA
VFI24790.1\|894570_895956_+	V-type H+-ATPase, subunit B	NA	NA	NA	NA
VFI24793.1\|895978_896590_+	ATP synthase, subunit D	NA	NA	NA	NA
VFI24799.1\|896631_897048_+	IS66 family Orf1	NA	NA	NA	NA
VFI24805.1\|897028_897352_+\|transposase	IS66-Spn1 transposase	NA	NA	NA	NA
VFI24811.1\|897805_898246_+\|transposase	transposase	A0A218MNE7	uncultured_virus	1.9e-06	24.6
VFI24817.1\|898840_898999_+\|transposase	transposase	NA	NA	NA	NA
VFI24823.1\|899091_899415_+	mobile genetic element	NA	NA	NA	NA
VFI24829.1\|899507_899897_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_11

903212 : 1000074

107

Streptococcus_phage(16.67%)

holin,protease,tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI24848.1\|903212_903479_+\|transposase	transposase	NA	NA	NA	NA
VFI24854.1\|903530_904535_+	peroxidase	NA	NA	NA	NA
VFI24860.1\|904509_905088_+	high-affinity Fe2+/Pb2+ permease	NA	NA	NA	NA
VFI24866.1\|905144_905387_-	50S ribosomal protein L31	NA	NA	NA	NA
VFI24872.1\|905482_906418_-	DHH subfamily 1 protein	NA	NA	NA	NA
VFI24878.1\|906521_906965_+	flavodoxin	NA	NA	NA	NA
VFI24884.1\|907080_907347_+	chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
VFI24890.1\|907343_907718_+	CrcB protein	NA	NA	NA	NA
VFI24896.1\|907711_908041_+	CrcB protein	A0A2H4PQR0	Staphylococcus_phage	1.4e-09	37.0
VFI24902.1\|908159_908507_+	50S ribosomal protein L19	NA	NA	NA	NA
VFI24908.1\|908675_909482_-	hydrolase	NA	NA	NA	NA
VFI24914.1\|909494_910799_-	dGTP triphosphohydrolase	E3T4P8	Cafeteria_roenbergensis_virus	5.0e-26	29.8
VFI24920.1\|910870_911248_+	hypothetical cytosolic protein	NA	NA	NA	NA
VFI24926.1\|911337_911670_+	transcriptional regulator	NA	NA	NA	NA
VFI24932.1\|911681_913253_+	signal recognition particle protein	NA	NA	NA	NA
VFI24939.1\|913447_914731_-	uracil permease	Q9KX94	Enterobacteria_phage	5.2e-60	35.3
VFI24944.1\|915033_915747_-	16S rRNA methyltransferase GidB	NA	NA	NA	NA
VFI24950.1\|915840_916401_+	Cytoplasmic membrane protein LemA	NA	NA	NA	NA
VFI24956.1\|916402_917302_+	heat shock protein HtpX	NA	NA	NA	NA
VFI24962.1\|917345_918905_-	ABC transporter ATP-binding protein	A0A1B0RXA0	Streptococcus_phage	2.1e-10	27.0
VFI24968.1\|919143_919461_-	BlpT protein, fusion	NA	NA	NA	NA
VFI24974.1\|919630_920173_+	putative metal-binding, possibly nucleic acid-binding protein	NA	NA	NA	NA
VFI24980.1\|920172_920802_+	endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA
VFI24986.1\|921012_921534_+	transcriptional attenuation of the pyrimidine operon/uracil phosphoribosyltransferase (bifunctional protein)	NA	NA	NA	NA
VFI24992.1\|921552_922476_+	aspartate carbamoyltransferase	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.0e-25	31.7
VFI24998.1\|922525_923605_+	carbamoyl-phosphate synthase, small subunit	R4TGJ8	Halovirus	6.3e-59	35.9
VFI25004.1\|923917_927094_+	carbamoyl-phosphate synthase, large subunit	NA	NA	NA	NA
VFI25010.1\|927368_928178_-	licD2 protein	A0A1V0SD50	Indivirus	2.6e-09	30.3
VFI25017.1\|928179_928983_-\|holin	phosphorylcholine transferase LicD1	A0A1V0SD50	Indivirus	5.3e-10	27.1
VFI25023.1\|928992_930480_-	teichoic acid subunit flippase	NA	NA	NA	NA
VFI25029.1\|930834_931542_+	cytidylyltransferase	NA	NA	NA	NA
VFI25035.1\|931546_932569_+	zinc-containing alcohol dehydrogenase	NA	NA	NA	NA
VFI25042.1\|932585_933455_+\|holin	choline kinase	NA	NA	NA	NA
VFI25048.1\|933444_934323_+	drug/metabolite transporter (DMT) superfamily permease	NA	NA	NA	NA
VFI25054.1\|934334_935024_+\|holin	CTP:phosphocholine cytidylyltransferase	A0A127AW70	Bacillus_phage	3.4e-05	45.0
VFI25060.1\|935119_935968_+	DNA processing protein DprA	S6BFL3	Thermus_phage	4.2e-34	39.5
VFI25066.1\|936151_936499_-	3-ketoacyl-ACP reductase	NA	NA	NA	NA
VFI25072.1\|937076_937457_+	membrane protein	NA	NA	NA	NA
VFI25078.1\|937432_938119_+	membrane protein	NA	NA	NA	NA
VFI25081.1\|938285_940373_+	DNA topoisomerase I	A0A1V0SCS0	Indivirus	3.9e-105	37.6
VFI25087.1\|940593_940953_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
VFI25093.1\|941045_941678_+	copper homeostasis protein	NA	NA	NA	NA
VFI25099.1\|941721_942378_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VFI25105.1\|942396_943029_+	2-isopropylmalate synthase	NA	NA	NA	NA
VFI25111.1\|943071_943491_+	2-isopropylmalate synthase	NA	NA	NA	NA
VFI25117.1\|943502_944540_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
VFI25123.1\|944536_944806_+	membrane protein	NA	NA	NA	NA
VFI25129.1\|944809_945169_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
VFI25135.1\|945536_945803_+	translation factor	NA	NA	NA	NA
VFI25141.1\|945783_945900_+	translation factor	NA	NA	NA	NA
VFI25147.1\|946222_948154_+	endonuclease	K4I1H4	Acidithiobacillus_phage	1.8e-16	33.7
VFI25153.1\|948113_949457_+	McrBC 5-methylcytosine restriction system component	NA	NA	NA	NA
VFI25159.1\|949631_950618_+	GMP reductase	G3MBI2	Bacillus_virus	1.8e-137	72.2
VFI25165.1\|950935_951634_+	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	3.9e-25	33.8
VFI25171.1\|951624_955164_+	chromosome condensation and segregation SMC protein	NA	NA	NA	NA
VFI25177.1\|955160_955955_+	Cof family protein	NA	NA	NA	NA
VFI25183.1\|955954_956773_+	Cof family protein	NA	NA	NA	NA
VFI25185.1\|956776_958066_+	cell division protein FtsY	NA	NA	NA	NA
VFI25191.1\|958118_958469_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	7.3e-57	96.6
VFI25197.1\|958484_958646_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	2.9e-21	96.2
VFI25203.1\|958642_958930_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	8.7e-24	71.8
VFI25209.1\|958926_959445_-\|transposase	degenerate transposase	A0A1S5SBP9	Streptococcus_phage	6.3e-81	94.9
VFI25215.1\|959603_961091_-	glucose-6-phosphate 1-dehydrogenase	H6WFS4	Cyanophage	8.4e-70	32.8
VFI25221.1\|961239_961980_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-32	40.1
VFI25227.1\|961979_964145_-	glutamine ABC transporter permease	NA	NA	NA	NA
VFI25233.1\|964314_965268_+\|protease	caax amino protease family protein	NA	NA	NA	NA
VFI25239.1\|965344_966901_+	excinuclease ABC subunit B	NA	NA	NA	NA
VFI25245.1\|966897_967332_+	helicase subunit of the DNA excision repair complex	NA	NA	NA	NA
VFI25252.1\|967341_967905_+	acetyltransferase	NA	NA	NA	NA
VFI25258.1\|967870_968359_+	acetyltransferase, gnat family	NA	NA	NA	NA
VFI25264.1\|968432_968900_+	MutT/nudix family protein	NA	NA	NA	NA
VFI25267.1\|968896_969412_-	transcriptional regulator	NA	NA	NA	NA
VFI25274.1\|969423_969951_-	membrane protein	NA	NA	NA	NA
VFI25280.1\|970232_970796_-	membrane protein	NA	NA	NA	NA
VFI25286.1\|970779_971331_-	flavoprotein involved in panthothenate metabolism	A0A068EHP1	Penguinpox_virus	3.1e-25	37.6
VFI25292.1\|971342_972032_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA
VFI25299.1\|972261_973932_+	formate-tetrahydrofolate ligase	NA	NA	NA	NA
VFI25305.1\|974259_975435_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
VFI25310.1\|975489_976194_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.8e-39	39.8
VFI25316.1\|976186_977536_+	histidine kinase	W8CYF6	Bacillus_phage	1.8e-34	34.6
VFI25322.1\|977537_978347_+	metallo-beta-lactamase superfamily protein	A0A0C5AFC1	Paenibacillus_phage	1.8e-34	39.0
VFI25328.1\|978437_978680_+	toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold protein	NA	NA	NA	NA
VFI25334.1\|978672_978936_+	cytotoxic translational repressor of toxin-antitoxin stability system	NA	NA	NA	NA
VFI25340.1\|978982_979756_+	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	1.0e-26	48.2
VFI25346.1\|980015_981002_-	L-lactate dehydrogenase 1	NA	NA	NA	NA
VFI25352.1\|981195_983664_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.5e-105	35.5
VFI25358.1\|983663_984407_+	sortase SrtA	NA	NA	NA	NA
VFI25364.1\|984650_985448_+	formate/nitrate transporter	NA	NA	NA	NA
VFI25370.1\|985595_985718_+	O-acetylhomoserine sulfhydrylase	NA	NA	NA	NA
VFI25376.1\|985739_986855_+	O-acetylhomoserine sulfhydrylase	NA	NA	NA	NA
VFI25382.1\|986950_988225_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA
VFI25388.1\|988234_989113_+\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
VFI25395.1\|989261_989357_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
VFI25401.1\|989353_989656_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
VFI25407.1\|989763_990402_+	uridine kinase	A0A1V0SAA3	Catovirus	8.4e-35	39.9
VFI25413.1\|990528_991869_+	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	6.7e-34	33.6
VFI25419.1\|991846_992059_+	exodeoxyribonuclease VII, small subunit	NA	NA	NA	NA
VFI25425.1\|992055_992931_+	farnesyl diphosphate synthase	NA	NA	NA	NA
VFI25431.1\|992923_993739_+	rRNA methylase	NA	NA	NA	NA
VFI25437.1\|993731_994163_+	transcriptional repressor protein	NA	NA	NA	NA
VFI25443.1\|994169_995837_+	DNA repair protein RecN	NA	NA	NA	NA
VFI25449.1\|995838_996567_+	serine/threonine protein phosphatase	A0A1V0EC57	Caulobacter_phage	1.4e-14	33.0
VFI25455.1\|996645_998469_+	GTP-binding protein LepA	A0A2K9L2P9	Tupanvirus	8.3e-19	40.9
VFI25461.1\|998549_998882_-	chlorohydrolase	NA	NA	NA	NA
VFI25467.1\|999061_999538_+	PTS system transporter subunit IIA	NA	NA	NA	NA
VFI25473.1\|999575_999878_+	PTS system galactose-specific transporter subunit IIB	NA	NA	NA	NA
VFI25479.1\|999885_1000074_+\|transposase	transposase-like protein, IS1381 ISSpn7	NA	NA	NA	NA

DBSCAN-SWA_12

1070507 : 1178827

Streptococcus_phage(71.79%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI25908.1\|1070507_1071725_-	Mobile element protein	A0A1S5SEW7	Streptococcus_phage	2.4e-232	99.8
VFI25914.1\|1071806_1072010_-	Mobile element protein	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
VFI25920.1\|1072470_1072701_-	Helix-turn-helix domain	A0A1S5SEX1	Streptococcus_phage	2.7e-36	100.0
VFI25926.1\|1072697_1073120_-	RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
VFI25932.1\|1073624_1073978_+	anaerobic benzoate catabolism transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
VFI25939.1\|1074323_1076243_-	tetracycline resistance protein TetM	A0A1S5SF82	Streptococcus_phage	0.0e+00	96.9
VFI25944.1\|1076619_1077537_-	putative conjugative transposon protein	A0A1S5SF22	Streptococcus_phage	1.0e-166	99.0
VFI25950.1\|1077551_1078553_-	lipoprotein, NLP/P60 family	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
VFI25956.1\|1078549_1080661_-	Tn916 ORF15 signal peptide containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
VFI25962.1\|1080729_1083177_-	Type IV secretory pathway, VirB4 components	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
VFI25968.1\|1083160_1083667_-	TcpE family	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
VFI25974.1\|1083641_1084139_-	Antirestriction protein	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
VFI25980.1\|1084255_1084477_-	FIG086557: Conjugation related protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
VFI25986.1\|1084656_1085904_+\|transposase	transposase	Q6V7R1	Burkholderia_virus	3.9e-12	23.9
VFI25992.1\|1086024_1086156_-	Uncharacterised protein	E4ZFP9	Streptococcus_phage	7.9e-17	100.0
VFI25998.1\|1086160_1086898_-	erythromycin ribosome methylase	E4ZFQ0	Streptococcus_phage	3.1e-134	99.2
VFI26004.1\|1087154_1088573_-	transcriptional regulator protein	A0A1S5SEX3	Streptococcus_phage	1.5e-233	100.0
VFI26010.1\|1088750_1090136_-	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
VFI26016.1\|1090164_1090548_-	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF96	Streptococcus_phage	2.3e-64	100.0
VFI26022.1\|1090566_1090881_-	Bacterial protein of uncharacterised function (DUF961)	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
VFI26028.1\|1091196_1091703_-\|protease	Zn-dependent protease of MPP family	NA	NA	NA	NA
VFI26035.1\|1091695_1092817_-	ThiF family protein	NA	NA	NA	NA
VFI26041.1\|1092975_1093065_-	Uncharacterised protein	NA	NA	NA	NA
VFI26044.1\|1093078_1094662_-	ABC transporter ATP-binding protein/permease	G3M9Y6	Bacillus_virus	3.6e-10	28.9
VFI26050.1\|1095053_1095350_-	Uncharacterised protein	NA	NA	NA	NA
VFI26056.1\|1095363_1095648_-	Uncharacterised protein	NA	NA	NA	NA
VFI26062.1\|1095722_1101947_-	SNF2 family protein	A0A248SL14	Klebsiella_phage	1.7e-217	30.4
VFI26068.1\|1101994_1102405_-	OmpA domain-containing protein	NA	NA	NA	NA
VFI26071.1\|1102867_1103032_+	Uncharacterised protein	NA	NA	NA	NA
VFI26078.1\|1103033_1103642_+	phage protein	NA	NA	NA	NA
VFI26084.1\|1103676_1106490_-	CHAP domain containing protein	Q4Z9D9	Staphylococcus_phage	2.1e-08	40.4
VFI26089.1\|1106501_1108859_-	Type IV secretion system protein	NA	NA	NA	NA
VFI26095.1\|1108809_1109169_-	PrgI family protein	NA	NA	NA	NA
VFI26101.1\|1109222_1110077_-	membrane protein	NA	NA	NA	NA
VFI26107.1\|1110093_1110336_-	Uncharacterised protein	NA	NA	NA	NA
VFI26113.1\|1110356_1112237_-	TraG/TraD family protein	NA	NA	NA	NA
VFI26119.1\|1112233_1112722_-	Uncharacterised protein	NA	NA	NA	NA
VFI26126.1\|1112711_1113011_-\|bacteriocin	Tn5253 bacteriocine putative	NA	NA	NA	NA
VFI26133.1\|1113292_1114129_-	abortive infection protein AbiGII	NA	NA	NA	NA
VFI26139.1\|1114128_1114719_-	Uncharacterised protein	NA	NA	NA	NA
VFI26145.1\|1115143_1115779_-	Uncharacterised protein	NA	NA	NA	NA
VFI26152.1\|1116070_1116658_-\|protease	Tn5253 CAAX amino terminal protease family	NA	NA	NA	NA
VFI26158.1\|1116660_1116894_-	Uncharacterised protein	NA	NA	NA	NA
VFI26165.1\|1116906_1117287_-	arsenate reductase-like glutaredoxin family protein	NA	NA	NA	NA
VFI26171.1\|1117279_1117729_-	Uncharacterised protein	NA	NA	NA	NA
VFI26177.1\|1117712_1119071_-	putative DNA methylase	A0A141E1L1	Streptococcus_phage	3.2e-132	57.2
VFI26183.1\|1119067_1119169_-	Uncharacterised protein	NA	NA	NA	NA
VFI26190.1\|1119169_1119949_-	replication initiator protein A	A0A286QNA4	Streptococcus_phage	1.8e-10	34.4
VFI26196.1\|1119945_1120119_-	Uncharacterised protein	NA	NA	NA	NA
VFI26202.1\|1120797_1126689_-\|protease	immunoglobulin A1 protease	NA	NA	NA	NA
VFI26208.1\|1126897_1128076_-	Uncharacterised protein	NA	NA	NA	NA
VFI26215.1\|1128252_1131903_-	ATP-dependent exoDNAse subunit beta	G3MA40	Bacillus_virus	8.8e-20	25.3
VFI26223.1\|1131899_1135175_-	exonuclease RexB	NA	NA	NA	NA
VFI26229.1\|1135700_1136030_+\|transposase	IS630-Spn1, transposase Orf1	NA	NA	NA	NA
VFI26234.1\|1136208_1136547_+\|transposase	putative IS630-Spn1 transposase	NA	NA	NA	NA
VFI26241.1\|1137030_1138335_-	Enolase	W6LP63	Streptococcus_phage	4.7e-234	94.5
VFI26247.1\|1138498_1138945_+	Uncharacterized conserved protein	NA	NA	NA	NA
VFI26253.1\|1138941_1139481_-	glycerate kinase	W6LM47	Streptococcus_phage	3.4e-45	53.1
VFI26259.1\|1139521_1140058_-	glycerate kinase	W6LM47	Streptococcus_phage	3.5e-18	55.7
VFI26265.1\|1140066_1140396_-	phosphoserine phosphatase	NA	NA	NA	NA
VFI26271.1\|1140340_1140712_-	phosphoserine phosphatase	NA	NA	NA	NA
VFI26277.1\|1140770_1142204_-	glycogen synthase	NA	NA	NA	NA
VFI26283.1\|1142200_1143340_-	glycogen biosynthesis protein	NA	NA	NA	NA
VFI26289.1\|1143329_1144472_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
VFI26295.1\|1144461_1146390_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA
VFI26302.1\|1146872_1148297_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
VFI26308.1\|1148868_1151148_-	pullulanase	NA	NA	NA	NA
VFI26314.1\|1151259_1153218_-	DNA ligase	A0A1W6DX16	Sphingobium_phage	1.2e-100	35.9
VFI26320.1\|1153310_1154489_-	macrolide efflux ABC transporter membrane-spanning permease	NA	NA	NA	NA
VFI26326.1\|1154568_1155432_-	transcriptional regulator MutR	NA	NA	NA	NA
VFI26332.1\|1155434_1157336_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.5e-50	29.5
VFI26338.1\|1157762_1158038_-	DNA-binding protein HU 1	A7KV42	Bacillus_phage	9.2e-23	66.3
VFI26344.1\|1158144_1158984_-	DegV family protein	NA	NA	NA	NA
VFI26350.1\|1159125_1159974_+	YpjC	M1Q1P6	Streptococcus_phage	1.4e-64	46.5
VFI26353.1\|1160066_1160984_-	bifunctional riboflavin kinase/FMN adenylyltransferase	NA	NA	NA	NA
VFI26359.1\|1161937_1162231_-	LSU ribosomal protein L27p	NA	NA	NA	NA
VFI26365.1\|1162247_1162592_-	ribosomal protein	NA	NA	NA	NA
VFI26371.1\|1162607_1162922_-	50S ribosomal protein L21	NA	NA	NA	NA
VFI26377.1\|1163103_1163796_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
VFI26383.1\|1164209_1164509_+	hypothetical cytosolic protein	NA	NA	NA	NA
VFI26388.1\|1164690_1165209_+\|transposase	degenerate transposase	A0A1S5SBP9	Streptococcus_phage	1.7e-78	91.1
VFI26394.1\|1165205_1165493_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	3.3e-23	70.6
VFI26400.1\|1165489_1165993_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-81	90.3
VFI26406.1\|1166253_1167228_-	phosphotransacetylase	NA	NA	NA	NA
VFI26412.1\|1167271_1168168_-	23S_rRNA pseudouridine synthase	NA	NA	NA	NA
VFI26418.1\|1168164_1168983_-	putative sugar kinase	NA	NA	NA	NA
VFI26424.1\|1168966_1169638_-	GTP pyrophosphokinase	NA	NA	NA	NA
VFI26430.1\|1169765_1170335_+	adenylate cyclase	NA	NA	NA	NA
VFI26436.1\|1170447_1171398_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	3.5e-37	33.4
VFI26442.1\|1171417_1172533_+	aminotransferase class-V	H7BUW1	unidentified_phage	1.0e-27	36.8
VFI26449.1\|1172537_1172885_+	cytosolic protein	NA	NA	NA	NA
VFI26456.1\|1172892_1173108_+	Uncharacterised protein	NA	NA	NA	NA
VFI26462.1\|1173190_1173832_+	DNA-binding protein	NA	NA	NA	NA
VFI26469.1\|1173849_1174539_+	glutamine amidotransferase, class I	NA	NA	NA	NA
VFI26476.1\|1174535_1175216_-	DNA repair protein RadC	NA	NA	NA	NA
VFI26482.1\|1175258_1177550_-	ATP-dependent DNA helicase PcrA	A7KV33	Bacillus_phage	5.5e-129	41.1
VFI26488.1\|1177740_1178130_-\|transposase	transposase	NA	NA	NA	NA
VFI26494.1\|1178155_1178827_-\|transposase	degenerate transposase (orf1)	NA	NA	NA	NA

DBSCAN-SWA_13

1248131 : 1346383

Streptococcus_phage(31.03%)

holin,protease,tRNA,transposase,integrase

attL 1344872:1344931|attR 1347277:1347346

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI26900.1\|1248131_1248461_-\|transposase	IS630-Spn1, transposase Orf1	NA	NA	NA	NA
VFI26906.1\|1248674_1250438_-	glycerophosphoryl diester phosphodiesterase family protein	A0A0S2MYI4	Enterococcus_phage	3.0e-05	22.2
VFI26912.1\|1250446_1251037_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
VFI26917.1\|1251134_1251626_-	DNA-binding protein	NA	NA	NA	NA
VFI26922.1\|1251702_1252395_-	5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
VFI26927.1\|1252411_1252726_-	membrane protein	NA	NA	NA	NA
VFI26932.1\|1252737_1253283_-	MutT/NUDIX hydrolase family protein	NA	NA	NA	NA
VFI26937.1\|1253292_1254672_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L277	Tupanvirus	1.3e-32	35.5
VFI26942.1\|1254815_1255604_+	lysozyme	NA	NA	NA	NA
VFI26947.1\|1255698_1256541_+	integral membrane protein	NA	NA	NA	NA
VFI26952.1\|1256540_1257023_+	regulatory protein	NA	NA	NA	NA
VFI26957.1\|1257022_1257643_+	phosphoglycerate mutase	NA	NA	NA	NA
VFI26963.1\|1258271_1258406_+\|transposase	degenerate transposase (orf1)	NA	NA	NA	NA
VFI26968.1\|1258405_1258747_+\|integrase	integrase core subunit	A0A2I6AZV9	Macacine_betaherpesvirus	4.6e-24	50.4
VFI26973.1\|1258865_1259807_-	peptidyl-prolyl isomerase	NA	NA	NA	NA
VFI26978.1\|1259873_1260587_-	O-methyltransferase	NA	NA	NA	NA
VFI26983.1\|1260588_1262391_-	oligoendopeptidase F	NA	NA	NA	NA
VFI26989.1\|1262409_1263363_-	competence protein	NA	NA	NA	NA
VFI26994.1\|1263435_1264296_-	tellurite resistance protein TehB	NA	NA	NA	NA
VFI26999.1\|1264311_1264779_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.2e-44	60.1
VFI27004.1\|1264741_1267096_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.2e-89	40.5
VFI27010.1\|1267197_1267431_-	membrane protein involved in protein export SecG	NA	NA	NA	NA
VFI27015.1\|1267619_1268819_-	multidrug resistance protein MdtG	NA	NA	NA	NA
VFI27020.1\|1268805_1269411_-	dephospho-CoA kinase	NA	NA	NA	NA
VFI27025.1\|1269410_1270235_-	formamidopyrimidine-DNA glycosylase	G3MA33	Bacillus_virus	5.6e-31	34.9
VFI27030.1\|1270283_1271183_-	GTP-binding protein Era	NA	NA	NA	NA
VFI27035.1\|1271199_1271595_-	diacylglycerol kinase	NA	NA	NA	NA
VFI27040.1\|1271575_1272073_-\|protease	putative metalloprotease	NA	NA	NA	NA
VFI27045.1\|1272177_1273833_+	fibronectin/fibrinogen binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	4.7e-05	36.5
VFI27050.1\|1273893_1276002_-	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	A0A143FPM9	Bacillus_phage	9.0e-25	42.6
VFI27056.1\|1276100_1277039_-	dihydroorotate dehydrogenase 1B	NA	NA	NA	NA
VFI27061.1\|1277049_1277850_-	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA
VFI27066.1\|1278099_1278480_-	lactoylglutathione lyase	NA	NA	NA	NA
VFI27071.1\|1278537_1278897_-	LSU ribosomal protein L20p	NA	NA	NA	NA
VFI27076.1\|1278948_1279149_-	LSU ribosomal protein L35p	NA	NA	NA	NA
VFI27081.1\|1280032_1281208_-	ABC-type transport system involved in multi-copper enzyme maturation, permease component	NA	NA	NA	NA
VFI27086.1\|1281211_1281799_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	28.1
VFI27091.1\|1282197_1284438_-	competence protein CelB	M1PSD2	Streptococcus_phage	1.5e-46	52.7
VFI27094.1\|1284421_1285072_-	competence protein	NA	NA	NA	NA
VFI27099.1\|1285139_1285709_-	acetyltransferase	NA	NA	NA	NA
VFI27104.1\|1285885_1286311_+	alanine dehydrogenase	NA	NA	NA	NA
VFI27109.1\|1286721_1286997_+	alanine dehydrogenase	NA	NA	NA	NA
VFI27114.1\|1287479_1287623_-	TfoX N- domain family protein	NA	NA	NA	NA
VFI27120.1\|1287625_1288126_-	acetyltransferase	NA	NA	NA	NA
VFI27125.1\|1288318_1289287_-	PhoH family protein	W8D063	Erwinia_phage	5.9e-48	47.9
VFI27130.1\|1289372_1289588_-	serine-type D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
VFI27135.1\|1289596_1290451_-	s1 RNA binding domain protein	NA	NA	NA	NA
VFI27140.1\|1290510_1291068_-	ribosome-recycling factor	NA	NA	NA	NA
VFI27145.1\|1291076_1291814_-	uridylate kinase	NA	NA	NA	NA
VFI27150.1\|1291897_1293232_-\|tRNA	tRNA (uracil-5-)-methyltransferase Gid	NA	NA	NA	NA
VFI27154.1\|1293725_1294115_+\|transposase	transposase-like protein, IS1381 ISSpn7	NA	NA	NA	NA
VFI27159.1\|1294140_1294530_+\|transposase	transposase	NA	NA	NA	NA
VFI27164.1\|1294518_1295166_-	phage protein	A0A2P0VK56	Streptococcus_phage	7.0e-13	33.7
VFI27169.1\|1295274_1295793_-	DUF1706 domain-containing protein	NA	NA	NA	NA
VFI27174.1\|1296019_1296889_-	tetrapyrrole methylase	M1PLC5	Streptococcus_phage	3.5e-116	76.1
VFI27179.1\|1296891_1297209_-	DNA replication intiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
VFI27184.1\|1297248_1298139_-	DNA polymerase III, delta' subunit	M1NSC1	Streptococcus_phage	6.4e-73	51.4
VFI27189.1\|1298135_1298774_-	thymidylate kinase	M1PSC7	Streptococcus_phage	9.8e-76	68.1
VFI27194.1\|1298993_1299791_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	8.0e-59	50.2
VFI27199.1\|1299794_1301057_-	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	7.2e-139	64.0
VFI27204.1\|1301066_1302176_-	gamma-glutamyl kinase	A0A1X9I5D0	Streptococcus_phage	3.8e-115	58.7
VFI27209.1\|1302276_1304160_-\|holin	choline binding protein E CbpE	Q332B9	Clostridium_botulinum_C_phage	1.2e-09	22.9
VFI27214.1\|1304162_1305050_-	23S rluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.0e-09	28.0
VFI27219.1\|1305039_1305501_-	lipoprotein signal peptidase, signal peptidase type II	NA	NA	NA	NA
VFI27224.1\|1305497_1306406_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	5.2e-06	27.7
VFI27229.1\|1306638_1307310_-\|protease	caax amino protease family protein	NA	NA	NA	NA
VFI27234.1\|1307363_1307585_-	Uncharacterised protein	NA	NA	NA	NA
VFI27239.1\|1307856_1308666_+	Cof family protein	NA	NA	NA	NA
VFI27244.1\|1308846_1309722_-	carbon-nitrogen hydrolase family protein	M1H5W0	Paramecium_bursaria_Chlorella_virus	1.1e-77	50.0
VFI27249.1\|1309731_1310817_-	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	2.0e-89	47.5
VFI27255.1\|1310813_1311941_-	LysA-like decarboxylase, diaminopimelate decarboxylase putative	NA	NA	NA	NA
VFI27260.1\|1311940_1313200_-	dehydrogenase family protein, saccharopine dehydrogenase	NA	NA	NA	NA
VFI27265.1\|1313196_1314057_-	spermidine synthase	NA	NA	NA	NA
VFI27270.1\|1314312_1314840_+\|transposase	degenerate transposase	NA	NA	NA	NA
VFI27275.1\|1314993_1316469_-	ornithine decarboxylase family protein	NA	NA	NA	NA
VFI27280.1\|1317175_1318171_+\|transposase	IS1239 transposase	H7BVY4	unidentified_phage	5.9e-35	35.1
VFI27285.1\|1318250_1318841_+	integral membrane protein	NA	NA	NA	NA
VFI27291.1\|1318882_1320871_-	ABC transporter, membrane-spanning protein	NA	NA	NA	NA
VFI27296.1\|1320872_1321631_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.7e-27	36.3
VFI27299.1\|1321645_1321756_-	Uncharacterised protein	NA	NA	NA	NA
VFI27304.1\|1322058_1322250_+	Uncharacterised protein	NA	NA	NA	NA
VFI27309.1\|1322603_1322876_-	PspC domain-containing protein	NA	NA	NA	NA
VFI27311.1\|1322933_1323383_-	SprT family protein	NA	NA	NA	NA
VFI27317.1\|1323369_1325499_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
VFI27322.1\|1325778_1325910_+	putative type II restriction endonuclease DpnI	NA	NA	NA	NA
VFI27327.1\|1325910_1326816_+	membrnae protein	NA	NA	NA	NA
VFI27332.1\|1326812_1327628_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
VFI27337.1\|1327757_1328474_-	alpha/beta hydrolase related protein	NA	NA	NA	NA
VFI27341.1\|1328477_1328789_-	Uncharacterised protein	NA	NA	NA	NA
VFI27345.1\|1328931_1329120_+\|transposase	transposase-like protein, IS1381 ISSpn7	NA	NA	NA	NA
VFI27349.1\|1329421_1330294_-	lipoprotein, putative	NA	NA	NA	NA
VFI27353.1\|1332065_1333571_-	pyruvate kinase	NA	NA	NA	NA
VFI27357.1\|1333629_1334637_-	6-phosphofructokinase	NA	NA	NA	NA
VFI27361.1\|1334719_1337821_-	DNA-polymerase III alpha-chain	A0A291AWR1	Streptomyces_phage	4.0e-114	32.8
VFI27365.1\|1338167_1340441_+	x-prolyl-dipeptidyl aminopeptidase	NA	NA	NA	NA
VFI27370.1\|1340457_1340928_+	arginine repressor	NA	NA	NA	NA
VFI27375.1\|1341433_1344784_-	type I restriction-modification system R subunit	A0A2H4P9W3	Gordonia_phage	3.1e-11	24.8
VFI27380.1\|1344813_1345395_-	type I restriction-modification system subunit S	NA	NA	NA	NA
1344872:1344931	attL	NA	NA	NA	NA
VFI27385.1\|1345417_1346383_-\|integrase	integrase/recombinase, phage integrase family protein	A0A2H4JAA2	uncultured_Caudovirales_phage	1.8e-33	29.6
VFI27385.1\|1345417_1346383_-\|integrase	integrase/recombinase, phage integrase family protein	A0A2H4JAA2	uncultured_Caudovirales_phage	1.8e-33	29.6
1347277:1347346	attR	NA	NA	NA	NA

DBSCAN-SWA_14

1374220 : 1416406

Streptococcus_phage(23.08%)

protease,transposase,integrase

attL 1366125:1366142|attR 1419442:1419459

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1366125:1366142	attL	NA	NA	NA	NA
VFI27518.1\|1374220_1374799_+\|transposase	degenerate transposase	A0A1S5SBP9	Streptococcus_phage	7.5e-75	80.8
VFI27523.1\|1374795_1375323_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.3e-89	96.0
VFI27528.1\|1375408_1376611_-	30S ribosomal protein S1	NA	NA	NA	NA
VFI27533.1\|1376983_1377214_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
VFI27538.1\|1377381_1378026_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
VFI27543.1\|1378040_1378964_-	permease	NA	NA	NA	NA
VFI27548.1\|1378960_1379650_-	permease	NA	NA	NA	NA
VFI27553.1\|1379714_1380419_-	extracellular oligopeptide-binding protein	NA	NA	NA	NA
VFI27558.1\|1380474_1381497_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
VFI27563.1\|1381628_1384064_-	topoisomerase IV subunit A, ParC	G3M9Z5	Bacillus_virus	1.9e-95	31.3
VFI27568.1\|1384412_1384520_-	N-6 DNA methylase	NA	NA	NA	NA
VFI27573.1\|1384519_1386463_-	topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	7.0e-125	43.0
VFI27578.1\|1386598_1387240_+	putative glycerol-3-phosphate acyltransferase PlsY	NA	NA	NA	NA
VFI27583.1\|1387319_1388549_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	2.1e-212	89.0
VFI27588.1\|1388677_1389511_-\|integrase	integrase core domain-containing protein	A0A1B1P773	Bacillus_phage	5.1e-56	47.4
VFI27593.1\|1389510_1389678_-\|transposase	transposase	NA	NA	NA	NA
VFI27598.1\|1389813_1390026_-\|transposase	transposase	NA	NA	NA	NA
VFI27603.1\|1390110_1391067_-	ABC transporter, membrane-spanning permease	NA	NA	NA	NA
VFI27608.1\|1391069_1392128_-	sugar ABC transporter permease	NA	NA	NA	NA
VFI27613.1\|1392120_1393656_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-19	32.5
VFI27618.1\|1393799_1394852_-	lipoprotein	NA	NA	NA	NA
VFI27624.1\|1394942_1395332_-	cytidine deaminase	NA	NA	NA	NA
VFI27629.1\|1395318_1395981_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
VFI27634.1\|1395998_1397276_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	1.4e-113	51.7
VFI27639.1\|1397272_1397854_-	16S RNA G1207 methylase RsmC	NA	NA	NA	NA
VFI27645.1\|1398236_1398473_-	membrane protein (pseudogene)	NA	NA	NA	NA
VFI27650.1\|1398662_1399583_+	pantothenate kinase	NA	NA	NA	NA
VFI27655.1\|1399650_1399887_+	putative 30S ribosomal protein S20	NA	NA	NA	NA
VFI27660.1\|1399939_1400464_+	topology modulation protein	A0A097BYE2	Leuconostoc_phage	1.4e-27	41.8
VFI27664.1\|1400486_1401197_-	purine nucleoside phosphorylase	NA	NA	NA	NA
VFI27669.1\|1401854_1402367_-	pneumolysin	NA	NA	NA	NA
VFI27674.1\|1402391_1402967_-	thiol-activated cytolysin	NA	NA	NA	NA
VFI27679.1\|1402976_1403384_-	topology modulation protein	NA	NA	NA	NA
VFI27684.1\|1403847_1404657_-	purine nucleoside phosphorylase	NA	NA	NA	NA
VFI27689.1\|1404672_1405215_-	phosphopentomutase	NA	NA	NA	NA
VFI27694.1\|1405216_1406428_-	phosphopentomutase	NA	NA	NA	NA
VFI27701.1\|1406441_1407125_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
VFI27706.1\|1407406_1408279_-	carbohydrate kinase	NA	NA	NA	NA
VFI27711.1\|1408420_1409278_-	FolD bifunctional protein; includes: methylenetetrahydrofolate dehydrogenase, methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	6.8e-40	41.5
VFI27716.1\|1409431_1410166_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	43.1
VFI27721.1\|1410165_1410495_-	amino acid ABC transporter permease	NA	NA	NA	NA
VFI27726.1\|1410439_1410850_-	amino acid ABC transporter permeae	NA	NA	NA	NA
VFI27731.1\|1411039_1411270_+	Protein of uncharacterised function (DUF1797)	NA	NA	NA	NA
VFI27735.1\|1411498_1413757_+\|protease	ATP-dependent Clp protease, ATP-binding subunit	K4FB40	Cronobacter_phage	1.3e-127	40.2
VFI27740.1\|1414482_1414812_-\|transposase	IS630-Spn1, transposase Orf1	NA	NA	NA	NA
VFI27746.1\|1414922_1415345_+	mutT/nudix family protein	NA	NA	NA	NA
VFI27751.1\|1415509_1415809_+	Domain of uncharacterised function (DUF1827)	NA	NA	NA	NA
VFI27757.1\|1415917_1416406_-\|transposase	IS3-Spn1 transposase, truncation	A0A2I6AZV9	Macacine_betaherpesvirus	4.3e-39	51.6
1419442:1419459	attR	NA	NA	NA	NA

DBSCAN-SWA_15

1517208 : 1566442

Streptococcus_phage(27.27%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI28310.1\|1517208_1517859_-\|tRNA	asparaginyl-tRNA synthetase	A0A2K9L2U8	Tupanvirus	4.7e-33	37.8
VFI28314.1\|1517869_1518553_-\|tRNA	asparaginyl-tRNA synthetase	A0A2K9L424	Tupanvirus	1.2e-15	31.6
VFI28319.1\|1518571_1518937_-	lactoylglutathione lyase	NA	NA	NA	NA
VFI28324.1\|1518929_1520117_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
VFI28329.1\|1520113_1520545_-	peptidase propeptide and ypeb domain-containing protein	NA	NA	NA	NA
VFI28334.1\|1520922_1521471_+	flavoprotein	NA	NA	NA	NA
VFI28339.1\|1521748_1522477_-	protein YaaA	A0A1X9I5I0	Streptococcus_phage	4.4e-40	39.0
VFI28343.1\|1522555_1522720_-	Uncharacterised protein	NA	NA	NA	NA
VFI28348.1\|1522786_1524382_-	membrane protein	NA	NA	NA	NA
VFI28353.1\|1524393_1524804_-	polypeptide deformylase	A0A2I7R224	Vibrio_phage	1.3e-09	32.2
VFI28359.1\|1524919_1525711_-	putative S-transferase	NA	NA	NA	NA
VFI28364.1\|1525723_1528420_-	cation transporter E1-E2 family ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	6.2e-71	28.6
VFI28369.1\|1528723_1529908_+	cation efflux family protein	NA	NA	NA	NA
VFI28374.1\|1530086_1531343_+\|transposase	IS1167, transposase	A0A1S5SBP9	Streptococcus_phage	6.0e-226	93.3
VFI28379.1\|1531472_1533344_-	ATPase component of ABC transporter with duplicated ATPase domains	A0A2K9L3Z8	Tupanvirus	4.6e-57	31.3
VFI28384.1\|1533340_1534525_-\|tRNA	tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.3e-38	32.3
VFI28390.1\|1534536_1535304_-	dihydrodipicolinate reductase	NA	NA	NA	NA
VFI28394.1\|1535569_1536418_-	DegV family protein	NA	NA	NA	NA
VFI28398.1\|1536419_1536794_-\|transposase	transposase	NA	NA	NA	NA
VFI28402.1\|1536867_1538127_-	phosphoglucosamine mutase	NA	NA	NA	NA
VFI28406.1\|1538116_1538221_-	phosphoglucosamine mutase	NA	NA	NA	NA
VFI28410.1\|1538244_1539024_-	lipoprotein, putative	NA	NA	NA	NA
VFI28414.1\|1539010_1539868_-	DNA integrity scanning protein DisA	NA	NA	NA	NA
VFI28418.1\|1540003_1540972_+	thioredoxin reductase	Q9JRK7	Streptococcus_phage	2.8e-66	100.0
VFI28422.1\|1541005_1541917_-	putative sporulation transcription regulator whiA	Q7AWZ3	Streptococcus_phage	1.3e-153	95.4
VFI28427.1\|1541913_1542891_-	transporter	A1IMD5	Streptococcus_phage	3.4e-184	99.7
VFI28432.1\|1542887_1543778_-	P-loop-containing kinase	A0A0R8VB27	Thermobifida_phage	3.9e-06	29.8
VFI28437.1\|1543829_1544210_-	endoribonuclease L-PSP	NA	NA	NA	NA
VFI28442.1\|1544220_1544808_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
VFI28447.1\|1544816_1546049_-\|protease	ATP-dependent Clp protease, ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-131	59.2
VFI28452.1\|1546080_1546251_-	membrane associated protein	NA	NA	NA	NA
VFI28457.1\|1546250_1546757_-	dihydrofolate reductase	A0A1B2IAU3	Erwinia_phage	4.6e-20	33.3
VFI28462.1\|1546886_1547405_-	DPS family peroxide resistance protein	NA	NA	NA	NA
VFI28467.1\|1547901_1549374_-	1,4-beta-N-acetylmuramidase	NA	NA	NA	NA
VFI28472.1\|1549443_1550202_-	triosephosphate isomerase	NA	NA	NA	NA
VFI28477.1\|1550299_1550977_-	DNA replication protein	A0A1X9I617	Streptococcus_phage	2.2e-09	41.3
VFI28482.1\|1550985_1551930_-	homoserine O-succinyltransferase	NA	NA	NA	NA
VFI28487.1\|1552111_1552624_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	9.1e-32	47.3
VFI28492.1\|1552710_1553469_-	methyltransferase type 11	NA	NA	NA	NA
VFI28497.1\|1553969_1555100_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-20	33.2
VFI28502.1\|1555549_1556125_-	amidases related to nicotinamidase	G3MA16	Bacillus_virus	3.3e-22	35.9
VFI28507.1\|1556124_1556913_-	GTP-sensing transcriptional pleiotropic repressor	NA	NA	NA	NA
VFI28512.1\|1557176_1558751_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.9e-59	36.8
VFI28517.1\|1558949_1560176_-	major facilitator; oxalate:formate antiporter	NA	NA	NA	NA
VFI28522.1\|1560368_1561685_+	oxidoreductase, pyridine nucleotide-disulfide class I, Mercury (II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-98	44.1
VFI28527.1\|1561783_1563127_+	UDP-N-acetylmuramyl tripeptide synthetase, Mur ligase	NA	NA	NA	NA
VFI28532.1\|1563126_1563909_+	cobyric acid synthase	NA	NA	NA	NA
VFI28537.1\|1564034_1565117_+	X-Pro dipeptidase	NA	NA	NA	NA
VFI28542.1\|1565441_1565783_-\|transposase	IS3-Spn1 transposase, truncation	A0A0C5AEA5	Paenibacillus_phage	2.8e-13	42.6
VFI28547.1\|1565792_1566275_-\|transposase	transposase-like protein, ISSpn1 ISSpn3	A0A1B1P773	Bacillus_phage	8.3e-27	46.3
VFI28552.1\|1566274_1566442_-\|transposase	IS3-Spn1 transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1809434 : 1816766

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI29792.1\|1809434_1810136_+	putative UDP-glucose 4-epimerase	A0A2K9L1R4	Tupanvirus	6.0e-34	35.1
VFI29797.1\|1810558_1811518_+	iron-compound ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.0e-57	40.8
VFI29801.1\|1811507_1812464_+	ferric iron ABC transporter membrane-spanning permease	NA	NA	NA	NA
VFI29807.1\|1812460_1813213_+	ferrichrome transport ATP-binding protein FhuC	W6JKT0	Anomala_cuprea_entomopoxvirus	5.6e-14	27.9
VFI29812.1\|1813308_1814274_+	iron-compound ABC transporter iron-compound-binding protein	NA	NA	NA	NA
VFI29817.1\|1814498_1814741_-	alpha-hemolysin family protein	A0A2H4PQM5	Staphylococcus_phage	1.3e-17	59.4
VFI29822.1\|1814740_1815463_-	ribosomal large subunit pseudouridine synthase B	NA	NA	NA	NA
VFI29827.1\|1815449_1816019_-	segregation and condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	5.0e-15	34.9
VFI29834.1\|1816037_1816766_-	segregation and condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	5.3e-09	22.3

DBSCAN-SWA_17

1989781 : 2034139

Streptococcus_phage(98.51%)

portal,tail,holin,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI30690.1\|1989781_1990039_-	Uncharacterised protein	A0A126GGL1	Streptococcus_phage	1.4e-41	100.0
VFI30695.1\|1990270_1991227_-	autolysin	A0A1S5SDA3	Streptococcus_phage	8.7e-145	100.0
VFI30700.1\|1991226_1991562_-\|holin	phage holin, LL-H family	A0A1S5SF76	Streptococcus_phage	3.5e-40	100.0
VFI30705.1\|1991565_1991865_-	Uncharacterised protein	X2KT07	Streptococcus_phage	1.9e-45	100.0
VFI30710.1\|1991873_1992224_-	phage protein	X2KPI8	Streptococcus_phage	4.7e-64	100.0
VFI30715.1\|1992226_1992430_-	phage protein	A0A1S5SDH0	Streptococcus_phage	6.6e-26	100.0
VFI30720.1\|1992410_1992527_-	phage protein	A0A1S5SCF0	Streptococcus_phage	4.0e-12	100.0
VFI30725.1\|1992523_1999804_-	PblB	A0A1S5SDP7	Streptococcus_phage	0.0e+00	100.0
VFI30730.1\|1999808_2000159_-	prophage protein	A0A1S5SCJ5	Streptococcus_phage	1.2e-62	100.0
VFI30735.1\|2000167_2003821_-	TMP repeat family	A0A1S5SD92	Streptococcus_phage	0.0e+00	100.0
VFI30740.1\|2003807_2004158_-	Uncharacterised protein	A0A1S5S814	Streptococcus_phage	1.2e-56	100.0
VFI30745.1\|2004196_2004577_-	prophage protein	A0A141DZN3	Streptococcus_phage	1.6e-65	100.0
VFI30750.1\|2004581_2004995_-\|tail	major tail protein	A0A1S5SDK3	Streptococcus_phage	2.5e-72	100.0
VFI30754.1\|2004997_2005366_-	conserved structural protein, putative	A0A1S5SFB8	Streptococcus_phage	1.2e-65	100.0
VFI30758.1\|2005362_2005878_-	Lj965 prophage protein	X2KPH9	Streptococcus_phage	2.7e-92	100.0
VFI30761.1\|2005852_2006191_-	Uncharacterised protein	A0A1S5S812	Streptococcus_phage	1.3e-55	100.0
VFI30764.1\|2006171_2006483_-\|head,tail	Phage gp6-like head-tail connector protein	A0A1S5SES7	Streptococcus_phage	2.5e-48	100.0
VFI30767.1\|2006484_2006673_-	Uncharacterised protein	A0A1S5SF62	Streptococcus_phage	6.5e-28	100.0
VFI30770.1\|2006662_2006845_-	transcription termination factor	A0A1S5SF01	Streptococcus_phage	1.2e-23	100.0
VFI30773.1\|2006856_2007699_-	MHP	A0A1S5SF88	Streptococcus_phage	3.8e-152	100.0
VFI30776.1\|2007704_2008289_-	phage scaffold protein	A0A1S5S806	Streptococcus_phage	4.3e-86	100.0
VFI30779.1\|2008515_2008767_-	gp37	A0A1S5SBY0	Streptococcus_phage	8.9e-41	100.0
VFI30782.1\|2008768_2009032_-	prophage Lp2 protein 33	A0A1S5SIN5	Streptococcus_phage	2.4e-44	100.0
VFI30785.1\|2009074_2009488_-	metal dependent phosphohydrolase, HD region	A0A060QNR4	Streptococcus_phage	1.1e-67	100.0
VFI30788.1\|2009484_2009694_-	phage protein	A0A141E1P2	Streptococcus_phage	2.6e-33	100.0
VFI30791.1\|2009695_2011279_-\|head	phage putative head morphogenesis protein, SPP1 gp7 family	A0A1S5SDF1	Streptococcus_phage	1.9e-301	100.0
VFI30794.1\|2011241_2012711_-\|portal	phage portal protein, SPP1 family	A0A1S5SDJ7	Streptococcus_phage	2.7e-278	100.0
VFI30797.1\|2012722_2014021_-\|terminase	phage terminase large subunit	A0A1S5SBX3	Streptococcus_phage	2.5e-259	100.0
VFI30800.1\|2013998_2014478_-\|terminase	phage terminase small subunit	A0A1S5SFR0	Streptococcus_phage	2.8e-83	100.0
VFI30803.1\|2014912_2015335_-	phage protein	A0A141E1Y4	Streptococcus_phage	6.3e-71	100.0
VFI30806.1\|2015404_2015770_-	Uncharacterised protein	A0A1S5SDW3	Streptococcus_phage	1.3e-53	100.0
VFI30809.1\|2015766_2016087_-	Uncharacterised protein	A0A1S5SDY8	Streptococcus_phage	7.6e-53	100.0
VFI30812.1\|2016073_2016322_-	Uncharacterised protein	A0A1S5SDI3	Streptococcus_phage	2.6e-40	100.0
VFI30815.1\|2016342_2016522_-	Uncharacterised protein	A0A1S5S7Z6	Streptococcus_phage	4.3e-29	100.0
VFI30818.1\|2016514_2016910_-	phage protein	A0A1S5SD94	Streptococcus_phage	3.3e-74	100.0
VFI30820.1\|2016924_2017098_-	Uncharacterised protein	Q0R590	Streptococcus_phage	1.7e-22	100.0
VFI30823.1\|2017097_2017307_-	Uncharacterised protein	A0A1S5S9F0	Streptococcus_phage	2.0e-33	100.0
VFI30826.1\|2017307_2017979_-	phage protein	A0A141E1Y8	Streptococcus_phage	4.1e-125	100.0
VFI30829.1\|2017968_2018298_-	gp24	A0A141E1Y9	Streptococcus_phage	2.3e-60	100.0
VFI30832.1\|2018342_2018765_-	Uncharacterised protein	A0A141E1Q1	Streptococcus_phage	2.8e-79	100.0
VFI30836.1\|2018808_2019237_-	holliday junction resolvase	A0A1S5SD90	Streptococcus_phage	5.4e-78	100.0
VFI30839.1\|2019233_2019563_-	phage protein	A0A141E1Z2	Streptococcus_phage	1.6e-53	100.0
VFI30842.1\|2019576_2019786_-	Uncharacterised protein	A0A1S5SFI1	Streptococcus_phage	3.2e-36	100.0
VFI30845.1\|2019751_2020258_-	methyltransferase	A0A141E1B8	Streptococcus_phage	2.5e-98	100.0
VFI30849.1\|2020267_2020684_-	single-strand binding protein family	E8ZDH2	Streptococcus_phage	3.0e-73	100.0
VFI30852.1\|2020680_2020779_-	phage protein	A0A141E1Q6	Streptococcus_phage	2.8e-11	100.0
VFI30855.1\|2020778_2021114_-	Uncharacterised protein	A0A1S5SBY6	Streptococcus_phage	2.0e-59	100.0
VFI30858.1\|2021106_2021595_-	Uncharacterised protein	A0A1S5SBS1	Streptococcus_phage	1.6e-89	100.0
VFI30861.1\|2021597_2022638_-	phage protein	A0A060QRX4	Streptococcus_phage	2.8e-189	100.0
VFI30864.1\|2022647_2023466_-	phage recombination protein Bet	A0A1S5SD57	Streptococcus_phage	6.7e-154	100.0
VFI30867.1\|2023588_2023750_-	Uncharacterised protein	A0A1S5SD47	Streptococcus_phage	1.4e-23	100.0
VFI30870.1\|2023742_2023997_-	Uncharacterised protein	A0A1S5SDG7	Streptococcus_phage	2.7e-37	100.0
VFI30873.1\|2023989_2024193_-	Uncharacterised protein	A0A141E201	Streptococcus_phage	2.0e-27	100.0
VFI30876.1\|2024192_2024354_-	Uncharacterised protein	A0A141E1R4	Streptococcus_phage	3.7e-24	100.0
VFI30879.1\|2024425_2025142_-	phage antirepressor protein	A0A1S5SFF6	Streptococcus_phage	1.5e-133	100.0
VFI30883.1\|2025165_2025369_-	Phage protein	A0A141E1R6	Streptococcus_phage	3.0e-31	100.0
VFI30886.1\|2025618_2025981_-	phage replication protein	A0A1S5SFN6	Streptococcus_phage	1.4e-63	100.0
VFI30889.1\|2026053_2026251_-	XRE family transcriptional regulator	A0A1S5SFQ0	Streptococcus_phage	1.6e-29	100.0
VFI30892.1\|2026332_2026572_+	ORF065	A0A1S5SD52	Streptococcus_phage	1.4e-43	100.0
VFI30894.1\|2026564_2026735_-	DNA, complete genome	A0A141E0V7	Streptococcus_phage	2.8e-22	100.0
VFI30896.1\|2027269_2027392_-	Uncharacterised protein	A0A1S5SDF9	Streptococcus_phage	2.9e-13	100.0
VFI30898.1\|2027468_2027744_-	Uncharacterised protein	A0A1S5SD97	Streptococcus_phage	1.7e-45	100.0
VFI30900.1\|2027905_2028673_+	cI repressor	A0A1S5SFG5	Streptococcus_phage	1.8e-140	100.0
VFI30902.1\|2028674_2028875_+	Uncharacterised protein	A0A1S5SFF2	Streptococcus_phage	7.1e-33	100.0
VFI30904.1\|2028810_2028981_-	Uncharacterised protein	A0A1S5SDF5	Streptococcus_phage	1.5e-23	100.0
VFI30906.1\|2029056_2030502_+	site-specific recombinase/resolvase	A0A1S5SDJ4	Streptococcus_phage	2.2e-277	100.0
VFI30908.1\|2030583_2031600_-	competence protein	NA	NA	NA	NA
VFI30910.1\|2031547_2032489_-	competence protein	NA	NA	NA	NA
VFI30912.1\|2032564_2032930_-	DNA binding protein	NA	NA	NA	NA
VFI30914.1\|2033080_2034139_-	alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.7e-14	26.8

DBSCAN-SWA_18

2217899 : 2226653

Streptococcus_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VFI31228.1\|2217899_2218739_-	cobalt ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-15	32.6
VFI31230.1\|2218723_2219551_-	ABCtransporter ATP-binding protein cobalt transport	G9BWD6	Planktothrix_phage	2.8e-22	32.9
VFI31232.1\|2219547_2220093_-	phosphatidylglycerophosphate synthase	NA	NA	NA	NA
VFI31234.1\|2220103_2220925_-	transcriptional regulation protein	NA	NA	NA	NA
VFI31236.1\|2220966_2222250_-\|protease	zinc-dependent protease	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	8.4e-18	30.0
VFI31238.1\|2222246_2223497_-\|protease	zinc-dependent protease	A0A1X9I714	Streptococcus_phage	2.7e-93	42.3
VFI31240.1\|2223655_2224024_+	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	7.0e-18	57.3
VFI31242.1\|2224026_2225124_+	recombination protein recF	NA	NA	NA	NA
VFI31244.1\|2225174_2226653_-	inosine-5-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.2e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR216053

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection