CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LR134292	Streptococcus equinus strain NCTC10389 genome assembly, chromosome: 1	3 crisprs	cas3,csa3,DinG,WYL,csm6,csn2,cas2,cas1,cas9,DEDDh	0	21	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LR134292_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134292_1

638897-638988

TypeIII-A

Consensus_repeat	Method
GGCTCTTTATCAACTGTAGTGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LR134292_1

>merge|LR134292|1|638897-638988|CRISPRCasFinder
GGCTCTTTATCAACTGTAGTGGGTAGCAAAGTTAAGTTCTAGCGAGAACAATTGTTGTTCTCGCTTTTGGCTCTTTGTCAACTGTAGTGGGT

>LR134292|1|1|638897-638988|CRISPRCasFinder
GGCTCTTTATCAACTGTAGTGGGT	AGCAAAGTTAAGTTCTAGCGAGAACAATTGTTGTTCTCGCTTTT
GGCTCTTTGTCAACTGTAGTGGGT

Protein	Signature genes	Signature genes Name	Protein_function
LR134292.1\|VEE22169.1\|644612_645467_+\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
LR134292.1\|VEE22137.1\|629676_630036_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
LR134292.1\|VEE22159.1\|640509_640971_-\|transposase	unknown	unknown	gnl\|CDD\|225995
LR134292.1\|VEE22174.1\|646601_648119_+\|Uncharacterised-protein	unknown	unknown	gnl\|CDD\|236766
LR134292.1\|VEE22147.1\|634390_635764_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	unknown	unknown	gnl\|CDD\|274398
LR134292.1\|VEE22167.1\|642864_644346_-\|UDPglucose-6-dehydrogenase	unknown	unknown	gnl\|CDD\|185017
LR134292.1\|VEE22172.1\|645848_646187_+\|Toxin-to-DNA-damage-inducible-protein-J	unknown	unknown	unknown
LR134292.1\|VEE22139.1\|630600_632127_+\|capsular-polysaccharide-biosynthesis-transcriptional-regulator,-LytR-family	unknown	unknown	gnl\|CDD\|367673
LR134292.1\|VEE22165.1\|642530_642836_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE22153.1\|637369_637873_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	unknown	unknown	gnl\|CDD\|227350
LR134292.1\|VEE22155.1\|637865_638723_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|291003
LR134292.1\|VEE22149.1\|635801_636866_+\|UDP-glucuronate-4-epimerase	unknown	unknown	gnl\|CDD\|187563
LR134292.1\|VEE22145.1\|633576_634320_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|273392
LR134292.1\|VEE22171.1\|645736_645868_+\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE22157.1\|638997_640254_-\|transposase-for-insertion-sequence-element-IS1557	unknown	unknown	gnl\|CDD\|225995
LR134292.1\|VEE22151.1\|636891_637356_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	unknown	unknown	gnl\|CDD\|370045
LR134292.1\|VEE22143.1\|632872_633562_+\|capsular-polysaccharide-biosynthesis-protein-CpsC	unknown	unknown	gnl\|CDD\|130079
LR134292.1\|VEE22163.1\|641803_642007_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE22141.1\|632132_632864_+\|capsular-polysaccharide-biosynthesis-protein-CpsB	unknown	unknown	gnl\|CDD\|226870
LR134292.1\|VEE22161.1\|640988_641288_-\|transposase	unknown	unknown	gnl\|CDD\|225995

Protein	Function_ID	Function_description	E-value
LR134292.1\|VEE22169.1\|644612_645467_+\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	2.3773e-135
LR134292.1\|VEE22137.1\|629676_630036_-\|transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.0714e-21
LR134292.1\|VEE22159.1\|640509_640971_-\|transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.87526e-27
LR134292.1\|VEE22174.1\|646601_648119_+\|Uncharacterised-protein	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	2.48583e-07
LR134292.1\|VEE22147.1\|634390_635764_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	3.65865e-111
LR134292.1\|VEE22167.1\|642864_644346_-\|UDPglucose-6-dehydrogenase	gnl\|CDD\|185017	PRK15057, PRK15057, UDP-glucose 6-dehydrogenase; Provisional.	5.59069e-175
LR134292.1\|VEE22139.1\|630600_632127_+\|capsular-polysaccharide-biosynthesis-transcriptional-regulator,-LytR-family	gnl\|CDD\|367673	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain.	3.01179e-56
LR134292.1\|VEE22153.1\|637369_637873_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	gnl\|CDD\|227350	COG5017, COG5017, Uncharacterized conserved protein [Function unknown].	3.7816e-26
LR134292.1\|VEE22155.1\|637865_638723_+\|glycosyltransferase	gnl\|CDD\|291003	pfam14305, ATPgrasp_TupA, TupA-like ATPgrasp. A member of the ATP-grasp fold predicted to be involved in the biosynthesis of cell surface polysaccharides such as the O-antigen in proteobacteria, the capsule in firmicutes and the polyglutamate chain of teichuronopeptide.	4.08397e-74
LR134292.1\|VEE22149.1\|635801_636866_+\|UDP-glucuronate-4-epimerase	gnl\|CDD\|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.39012e-165
LR134292.1\|VEE22145.1\|633576_634320_+\|protein-tyrosine-phosphatase	gnl\|CDD\|273392	TIGR01007, Tyrosine-protein_kinase_CpsD, capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.21876e-99
LR134292.1\|VEE22157.1\|638997_640254_-\|transposase-for-insertion-sequence-element-IS1557	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.95256e-113
LR134292.1\|VEE22151.1\|636891_637356_+\|glycosyltransferase-in-exopolysaccharide-biosynthesis	gnl\|CDD\|370045	pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like. Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane.	9.27851e-15
LR134292.1\|VEE22143.1\|632872_633562_+\|capsular-polysaccharide-biosynthesis-protein-CpsC	gnl\|CDD\|130079	TIGR01006, Capsular_polysaccharide_biosynthesis_protein_CapA, polysaccharide export protein, MPA1 family, Gram-positive type. This family contains members from Low GC Gram-positive bacteria; they are proposed to have a function in the export of complex polysaccharides. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.52742e-79
LR134292.1\|VEE22141.1\|632132_632864_+\|capsular-polysaccharide-biosynthesis-protein-CpsB	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	2.53794e-81
LR134292.1\|VEE22161.1\|640988_641288_-\|transposase	gnl\|CDD\|225995	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.01443e-18

>LR134292.1|VEE22155.1|637865_638723_+|glycosyltransferase
MSSNKLVKNIRYMLKFLPDRIYIQLNYFARFKKFANLETPKTYNEKINWLKLNVKNPLYTKLVDKYEVKSYVGNIIGSQYIIPTLQVYDDVDSIDFDALPEQFVLKCTHDSEGLVICKDKTSLNIDKAKKKLRRALKQNFFYIGREYPYKNVKPRIIAEPYLEDNIYKELRDYKFFCFNGEPKYMLVISNRMNDVKIDYFDLNFKHLDTRQKYENADQKIEKPINFDKMIELSRTLSKKLGHVRVDFYEVNGKIYFGELTFYHFSGFMPFEPAKWDEIFGEYFNF
>LR134292.1|VEE22153.1|637369_637873_+|glycosyltransferase-in-exopolysaccharide-biosynthesis
MIFVTVGSRNYPFNRLFKKIDELYDNGILTEPMFAQIGTSTYIPKNFEYQDFISTDEFVQKISEADIVVTHGASGSIMKALNAGKKVIAVTRLEKYGEHIDDHQIQNNEAFSSNGYVLMPDLELKNLGDCFKKIFDGTEDNLIPWENKDPFAIVKRIDSFIKEDWYE
>LR134292.1|VEE22151.1|636891_637356_+|glycosyltransferase-in-exopolysaccharide-biosynthesis
MKNKREPKICFVSSSGGHWEQLQKLKPLSEKYSGFFVTEKTKFDAPLAKYFMIQTDLKDKMMILKMLWNTLYACFIWVKERPDFIITTGTMVAYPFYILSIVFRKKFVFIETFGRANMPTVAGKRMEKHSDLFIVQWETQKKYYKKAIYGGCLY
>LR134292.1|VEE22149.1|635801_636866_+|UDP-glucuronate-4-epimerase
MDNLKFDNKTILVTGASGFIGSNLVKKICDLANNATVVGLDNMNDYYDVRLKEERLSQLSKYPNFLFIKGDIADKKVIDDVFERYQPSIVVNLAAQAGVRYSITNPDVYIQSNLIGFYNILEACRHSYDDGKEGVEHLVYASSSSVYGSNKKVPYSTEDKVDNPVSLYAATKKSNELLAHAYSKLYNIPSTGLRFFTVYGPAGRPDMAYFGFTDKLVNGETIKIFNYGNCKRDFTYVDDIVEGIVRVMAKAPEKKNGEDGLPLPPYKVYNIGNNHPENLLDFVQILSEELVRAGVLPEDYDFDAHKELVPMQPGDVPVTYADTSALEHDFGYKPSTTLRAGLRKFAEGYNEFYK
>LR134292.1|VEE22147.1|634390_635764_+|glycosyltransferase-in-exopolysaccharide-biosynthesis
MYSEDSRKKVFYLLFDILALLIAYGILVSFYSFSFFPSKFFGLMFIALQVFIGVMSDEYSNVLNRGYLQEFKTSVQNGVKTVILLSLVLILGKCRFISDISSMSYYFLLNLFWVVAALTFLGRVIVKKGIPSKKENSKKILLITDFSDEDKLENVLLKNNYQILAYVSPERKDTELPVLWQVDEIRDFVANHQVDEIYVNKDYRSDFREVARYIRLLGIPTTVKIGDYSDYYVADSVIKKLGDITFVTTATNIVKCRQLVLKRMIDILGSIVGIIITGIVAVIIAPIVKKQSPGPLIFKQKRVGKNGKIFNIYKFRSMYTDAEERKKELLAQNDLDTNLMFKMEDDPRIFPFGHKLRDWSLDELPQFINVLKGEMSVVGTRPPTLDEYRNYELHHFKRMTTKPGITGLWQVSGRSDITDFEEVVALDMKYIQNWSISNDIKIIAKTVKVVLKREGSR
>LR134292.1|VEE22145.1|633576_634320_+|protein-tyrosine-phosphatase
MPTLELAKSQAEIIKKLEEYYNSIRTNIQFSGRNLKVIALTSSQPKEGKSATATNLAISFARAGLRTLLIDADTRNSVMSGTFRSKESYDGLTSYLSGNAELSDVICNTSVDNLMVIPSGKIPPNPTSLIQNDNYERMIETVRDLYDYVIIDTPPLGRVVDAAIIAHSSDASLLVTKPGINKRRTITKLKEQLEQSGAVFLGVILNKFDFKADKYGYGYGYGYGYGYGYGKYGKDEKSSKGNKKKKK
>LR134292.1|VEE22143.1|632872_633562_+|capsular-polysaccharide-biosynthesis-protein-CpsC
MNTNDNANIEIDVLYLLRKLWSKKFFIAFVGLLVGTIALLGSVFFIKPKYISTTRIYVVSRSSDTTLTNQDLQAGSYLVNDYKEVITSSEVLASVIDQEKLSMSAGQLSGEISVNIPTDTRVISISVTDTDAQRACDIANTVREVAAEKIKSVTKVDDVTTLESATKASHPSSPNVKKNAAIGFLAGAFVAIVGILVAEALDDRVHRPEDIEEVLGLTLLGVVLDADKL
>LR134292.1|VEE22141.1|632132_632864_+|capsular-polysaccharide-biosynthesis-protein-CpsB
MIDIHSHIVFDVDDGPSTIEESLALIGESYRQGVRTIVSTSHRRRDLFKIPEEKIWENFKQVKEAAEAKFEGLEILYGGELYYNNALLEKLEDHQVPRMNDTQFALIEFSMKTSWKGIHDGLTKVLMLGVTPIIAHIERYDALENHEERVRELINMGYYTQINSAHVLKAKLFGDKYRKFKKRARYFLEKNVVHIVASDMYNLDARPPKMDVARDIISQEFGTSRAYRLFEENAKTLLENKYL
>LR134292.1|VEE22139.1|630600_632127_+|capsular-polysaccharide-biosynthesis-transcriptional-regulator,-LytR-family
MPTHSHHHGSDMQHHHHHHSHHHGGHHKSSRRRSRFAGLTYVNYALLVLYALLAGIATYTMYAHQILAFRHLNLVYTIILVAIFALCLVLTLRKKGKVLTTALLLVFSIIAAVSLFAFKSLVDVAHNMNESASYSEIDMSVVVPSNSSINDVTELSSVQAPTGADGTNIDALLSQIKSDKGVDLSTEKVDSYQTAYENLVNGSSQAMIFNGAYASLLEMSYDNYQDNLKTIYTYKFKTSLKDKAKASNSNVFNIYISGIDTYGSISTVSRSDVNLILTVNMNTHKILMTETSRDSYVKIPDGGADQYDKLTHAGIYGVETSEKTLENLYGITIDYYARLNFDSFLKLIDALGGVTVYNDQAFTSLHGNYDFPVGNVTLDSDKALGFVRERYSLEHGDYDRGNNQMKVIQAILDKLTSLKSVSNYSTVISNVQDSIQTDMKLDTMMKLVNAQLDSGKKFTVTSQEVTGTGSTGELVSYAMPSSSLYMIQLDDASVAKASQAIKDVMEGK
>LR134292.1|VEE22137.1|629676_630036_-|transcriptional-regulator
MRIQQLHYIVKIVETGSMNEAAKQLFITQPSLSNAVRDLEREMGIEIFIRNPKGITLTKDGVEFLSYARQILEQTALLEERYKSKNTNRELFSVSAQHYAFVVNAFVSLLKGTDMTRKH
>LR134292.1|VEE22157.1|638997_640254_-|transposase-for-insertion-sequence-element-IS1557
MEHINNTTLLIGIKDKNITLNQAIQHDTHIELIATLDYHPPKCKHCKGKQIKYDFQKPSKIPFIEIGGFPSLIRLKKRRFQCKSCRKVTVSETSLVKKNCQISEIVRQKIAQLLLNRDALTHIASKLAISTSTAYRKLKQFHFQEDYTTLPEILSWDEFSYQKGKLAFIAQDFNTKKIIAILDDRRQTTIRNHFFKYSKEARNKVKVVTVDMSGSYIPLIKLLFPNAKIVLDRFHIVQHMSRALNQTRIKIMKQFVVKSLEYRALKYYWKLIQKDSRKLSLKPFYSRTFRETLTPRECLNKMFKLVPEIKDYYDLYQLLLFHLQEKNSKQFFGLINDTLPHLNQTFKTALNTFVRYKNHITNAIELPYSNAKLEATNKLIKDIKRNAFGYKNFEHFKKRIFIALNTTKEKTSFVSSRV
>LR134292.1|VEE22159.1|640509_640971_-|transposase
MSGNYIPLVKLLFPNAKIVLDRFHIVQHINRALKQTRIQIMKQFEKKSLEYRVLKSYWKLIQKDSRKLSPNAFYSRAFRETLTPKECLDKIFKHVPQLEKYYNLYQLLLFHLQEQHTEQFLGLIQEVLPQVNHSFKTTLTTFIRYKKIHYQCH
>LR134292.1|VEE22161.1|640988_641288_-|transposase
MKQKTAQLLLNREALTHIAEKLAISTSTVYRKLKQFQFKDDYSTLPEVLSWDEFPYQKGKLAFIAQDYNTKKIIAILDNRRQTTIRNYFFKYSKEARSG
>LR134292.1|VEE22163.1|641803_642007_-|Uncharacterised-protein
MDEFEKFKEASYRLIAELITKNSSDSVSESVFIVIDKLLEAKNLQIDTLANEKALAKLTDIEDKLSL
>LR134292.1|VEE22165.1|642530_642836_-|Uncharacterised-protein
MYIYTFYHYTSVETLKLILLNKTLRFKSLGFVDDPNEQQTKDFGNLGSLKFVSCWTSLADSIPQWNMCGNNFRGIRLSISFDKISDVFKTITLPGVGEILP
>LR134292.1|VEE22167.1|642864_644346_-|UDPglucose-6-dehydrogenase
MKLFSSAILAKLILDYRKDNKVSQEALATESGINRSILSKIEQGEHIPSVTQLETLANIIDFDITDLFTVKKEQAQKLDHSYSIAVAGTGYVGLSIATLLAQHNHVTAVDIIPEKVELINNKKSPIQDDYIEKYLAEKELDLVATLDGDAAYKDADFVIIAAPTNYDSEKNYFDTSAVESVIEQVLSVNKDAIMVIKSTIPVGFTDSVRQKFNTKNIIFSPEFLRESKALYDNLYPSRIIVSTDKEDEELTKSAKLFAQLLQDGAEKENIDTLFMGFTEAEAVKLFANTYLALRVSYFNELDTYAELKGLDTQAIINGVGLDPRIGTHYHNPSFGYGGYCLPKDTKQLLANYNDVPQNMMTAIVKSNRTRKDFIADQVLKLAGYYAYTNNDNYSPQQEKETVIGVYRLTMKSNSDNFRQSSIQGVMKRIKAKGATVIIYEPTLENGTTFFGSKVVNNLKQFKKLSQSIVANRYNAELDDVKEKVYTRDIFRRD
>LR134292.1|VEE22169.1|644612_645467_+|dTDP-4-dehydrorhamnose-reductase
MILVTGANGQLGTELRYLLDERGEEYVAVDVAEMDITNAEKVDEVFAQVKPTLVYHCAAYTAVDAAEDEGKELDYAINVTGTEIVAKAAAKYGATLVYISTDYVFDGKKPVGQEWEVDDTPDPQTEYGRTKRLGEEAVEKYAKNFYIIRTAWVFGNYGKNFVFTMQNLAKTHDTLTVVNDQHGRPTWTRTLAEFMTYLTENQKEFGYYHLSNDATEDTTWYDFAVEILKDTDVVVKPVDSSQFPAKAKRPLNSTMSLKKAKATGFVIPTWQEALKEFYKQDVKK
>LR134292.1|VEE22171.1|645736_645868_+|Uncharacterised-protein
MSEEELEKERLFRQLQTEVNESIAEYKTGKYYTEEDLNEQYGL
>LR134292.1|VEE22172.1|645848_646187_+|Toxin-to-DNA-damage-inducible-protein-J
MNNTVYEIVFQSNVITKLDEIYDSIARELSAPITANKKIKEIRDNISLLKIFPEACFDADDKFGKVIGSNNKTRGITLKRDYIVLYFIDDNQRRVVVTNLFSTKSDYMRLFK
>LR134292.1|VEE22174.1|646601_648119_+|Uncharacterised-protein
MVVKKDMNSNGHRLLIQKLLVSIHYLTLFKDEIVLVEKTPSLLGDSFSLNTVQSELGEILSSVDALSKQEKLIKSTFWYDEPSFRLMNHALDIVGSWVRGIDHILEICESKSVFQAILGDNRQRAFGILIDVFTSLRVTNMSIKEESEYPVLIDPLQVVEYKKREVKKAELFAKIDALVPRKLEQVHTESEETKAESIPELLAKALAKREEAVNPEKVLGPTELEEVAPEVSEEVENQEVDEDTAEPAVSEVSEEPESVEENSSQEEVPAEEKNGATDDEVVSQLDLEDSAEDEKVAQEESSQLSEAKSEQEVSEEVPVEIAEQEVNDDPTESGKLEVSEVDVQAESTELDVDEKVSTDDSEVSDSEEEESKESDYPEITREDAIKQFRSFLFDHKGLLCVLDARDDLKHEIKFYNVFDRFYGAFDNVSDCLILLENILDDIRKRPKEVFDKEGNLISEPTEPINLLIYGGDILMKDSRFETLMSELSPFYHRSDLHVYSYKAYE

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Crispr_ID: LR134292_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134292_2

1078548-1080562

TypeII

Consensus_repeat	Method
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CRISPRCasFinder
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CRT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	PILER-CR
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	PILER-CR

30 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LR134292_2

>merge|LR134292|2|1078548-1080562|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GGGTTTTGGTGTTGTAAATCTTGAGAGTACAAAAACACCAAAGAATGATATGGAGCGCAACATAGGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTATTCATTGACTCATGTCCAAAAGAACCGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGTTCAAAATCGCAACATTCTTAGCGCCTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACATAGATATTGTGTTATATTCATTCCTGATTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGCTAGAACATGGAACTGTTGCAACAGACTAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACAGGTATGTTATAGTAGCTTTGCATTTCGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGTGTCAAAGTCTTGGTTTTGAATGTTTTTAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCAATTGCCGAAACATAAAGAAGATGAATGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAAGGCGAATAGCCTACTTATATAGCGGGGCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCATTTAAATACCCCCGTCCAATATCTGAAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTATGACAACAGAATCATTAATTCAAAGTAAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCCTGCAATTCTGTCTAAAATTTCTTGATTGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTTTGTAGTGGTTTGAAACCAGCCACTGCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAGGTCTTGTGTGATTTGCTCAACATCTTCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAGGTCTTGTGTGATTTGCTCAACATCTTCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGGAATAATGCTCACAGACTCAAACATATTCGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACCATGACGGGAACATTGTCAAATGTGTTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACAACGCTAGCGACTTAAAACAATCATCTGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGCTGTTCTAATTCCAGATAATTCATTCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACCATGACGGGAACATTGTCAAATGTGTTTATTTTACGGTTACTTAAATCTTGAGAGTACAAAAACACAACGCTAGCGACTTAAAACAATCATCTGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGCTGTTCTAATTCCAGATAATTCATTCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACATACCATCAATAATTGCATCAACTACGTCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGTCCATCAATTCCGGAAATCCGTCATCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAGTTGTTAGACACATAATCAAATAAGATTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCGCTAATTCGTAAAACAAATCTTCGTCAGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTAGTACTTGTGATAGCACCGTCGACAATCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGCGTTCCTATTGTGTTCATTAACTACAGGTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTGGTAGCATTGCCTTTATCGTCATACTCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTATTATTCTAATGCGAACACAGTCTATGCGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>LR134292|2|2|1078548-1080562|CRISPRCasFinder
GGGTTTTGGTGTTGTAAATCTTGAGAGTACAAAAAC	ACCAAAGAATGATATGGAGCGCAACATAGG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATTCATTGACTCATGTCCAAAAGAACCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTTCAAAATCGCAACATTCTTAGCGCCTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATAGATATTGTGTTATATTCATTCCTGATT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCTAGAACATGGAACTGTTGCAACAGACTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAGGTATGTTATAGTAGCTTTGCATTTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTGTCAAAGTCTTGGTTTTGAATGTTTTTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCAATTGCCGAAACATAAAGAAGATGAAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAGGCGAATAGCCTACTTATATAGCGGGGCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCATTTAAATACCCCCGTCCAATATCTGAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATGACAACAGAATCATTAATTCAAAGTAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CCTGCAATTCTGTCTAAAATTTCTTGATTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTTTGTAGTGGTTTGAAACCAGCCACTGCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGAATAATGCTCACAGACTCAAACATATTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
ATTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATACCATCAATAATTGCATCAACTACGTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTCCATCAATTCCGGAAATCCGTCATCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGTTGTTAGACACATAATCAAATAAGATTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCGCTAATTCGTAAAACAAATCTTCGTCAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TAGTACTTGTGATAGCACCGTCGACAATCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCGTTCCTATTGTGTTCATTAACTACAGGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGGTAGCATTGCCTTTATCGTCATACTCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATTATTCTAATGCGAACACAGTCTATGCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>LR134292|2|1|1078548-1080562|CRT
GGGTTTTGGTGTTGTAAATCTTGAGAGTACAAAAAC	ACCAAAGAATGATATGGAGCGCAACATAGG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATTCATTGACTCATGTCCAAAAGAACCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTTCAAAATCGCAACATTCTTAGCGCCTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATAGATATTGTGTTATATTCATTCCTGATT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCTAGAACATGGAACTGTTGCAACAGACTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAGGTATGTTATAGTAGCTTTGCATTTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTGTCAAAGTCTTGGTTTTGAATGTTTTTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCAATTGCCGAAACATAAAGAAGATGAAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAGGCGAATAGCCTACTTATATAGCGGGGCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCATTTAAATACCCCCGTCCAATATCTGAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATGACAACAGAATCATTAATTCAAAGTAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CCTGCAATTCTGTCTAAAATTTCTTGATTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTTTGTAGTGGTTTGAAACCAGCCACTGCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGAATAATGCTCACAGACTCAAACATATTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
ATTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATACCATCAATAATTGCATCAACTACGTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTCCATCAATTCCGGAAATCCGTCATCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGTTGTTAGACACATAATCAAATAAGATTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCGCTAATTCGTAAAACAAATCTTCGTCAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TAGTACTTGTGATAGCACCGTCGACAATCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCGTTCCTATTGTGTTCATTAACTACAGGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGGTAGCATTGCCTTTATCGTCATACTCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATTATTCTAATGCGAACACAGTCTATGCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>LR134292|2|1|1078614-1080562|PILER-CR
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTATTCATTGACTCATGTCCAAAAGAACCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTTCAAAATCGCAACATTCTTAGCGCCTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATAGATATTGTGTTATATTCATTCCTGATT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCTAGAACATGGAACTGTTGCAACAGACTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAGGTATGTTATAGTAGCTTTGCATTTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTGTCAAAGTCTTGGTTTTGAATGTTTTTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCAATTGCCGAAACATAAAGAAGATGAAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAGGCGAATAGCCTACTTATATAGCGGGGCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCATTTAAATACCCCCGTCCAATATCTGAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATGACAACAGAATCATTAATTCAAAGTAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CCTGCAATTCTGTCTAAAATTTCTTGATTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTTTGTAGTGGTTTGAAACCAGCCACTGCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGAATAATGCTCACAGACTCAAACATATTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
ATTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACATACCATCAATAATTGCATCAACTACGTCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGTCCATCAATTCCGGAAATCCGTCATCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAGTTGTTAGACACATAATCAAATAAGATTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCGCTAATTCGTAAAACAAATCTTCGTCAGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTAGTACTTGTGATAGCACCGTCGACAATCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGCGTTCCTATTGTGTTCATTAACTACAGGTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTGGTAGCATTGCCTTTATCGTCATACTCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTATTATTCTAATGCGAACACAGTCTATGCG
	ATACCATCAATAATTGCATCAACTACGTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTCCATCAATTCCGGAAATCCGTCATCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGTTGTTAGACACATAATCAAATAAGATTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCGCTAATTCGTAAAACAAATCTTCGTCAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TAGTACTTGTGATAGCACCGTCGACAATCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCGTTCCTATTGTGTTCATTAACTACAGGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGGTAGCATTGCCTTTATCGTCATACTCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATTATTCTAATGCGAACACAGTCTATGCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

>LR134292|2|2|1079999-1080562|PILER-CR
	TTATTCATTGACTCATGTCCAAAAGAACCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTTCAAAATCGCAACATTCTTAGCGCCTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ATAGATATTGTGTTATATTCATTCCTGATT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCTAGAACATGGAACTGTTGCAACAGACTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAGGTATGTTATAGTAGCTTTGCATTTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GTGTCAAAGTCTTGGTTTTGAATGTTTTTA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCAATTGCCGAAACATAAAGAAGATGAAT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AAGGCGAATAGCCTACTTATATAGCGGGGCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCATTTAAATACCCCCGTCCAATATCTGAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATGACAACAGAATCATTAATTCAAAGTAA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CCTGCAATTCTGTCTAAAATTTCTTGATTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTTTGTAGTGGTTTGAAACCAGCCACTGCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGGTCTTGTGTGATTTGCTCAACATCTTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GGAATAATGCTCACAGACTCAAACATATTC
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACCATGACGGGAACATTGTCAAATGTGTTT
ATTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	ACAACGCTAGCGACTTAAAACAATCATCTG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGCTGTTCTAATTCCAGATAATTCATTCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACATACCATCAATAATTGCATCAACTACGTCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACCGTCCATCAATTCCGGAAATCCGTCATCCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACAGTTGTTAGACACATAATCAAATAAGATTTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTCGCTAATTCGTAAAACAAATCTTCGTCAGGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTAGTACTTGTGATAGCACCGTCGACAATCAGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACGCGTTCCTATTGTGTTCATTAACTACAGGTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTTGGTAGCATTGCCTTTATCGTCATACTCTGTTTTACGGTTACTTAAATCTTGAGAGTACAAAAACTATTATTCTAATGCGAACACAGTCTATGCG
	ATACCATCAATAATTGCATCAACTACGTCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	CGTCCATCAATTCCGGAAATCCGTCATCCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	AGTTGTTAGACACATAATCAAATAAGATTT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TCGCTAATTCGTAAAACAAATCTTCGTCAG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TAGTACTTGTGATAGCACCGTCGACAATCA
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	GCGTTCCTATTGTGTTCATTAACTACAGGT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TTGGTAGCATTGCCTTTATCGTCATACTCT
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC	TATTATTCTAATGCGAACACAGTCTATGCG
GTTTTACGGTTACTTAAATCTTGAGAGTACAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134292.1\|VEE23021.1\|1087540_1088200_-\|integral-membrane-protein	unknown	unknown	gnl\|CDD\|226884
LR134292.1\|VEE23011.1\|1081672_1081981_-\|CRISPR-associated-endoribonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
LR134292.1\|VEE23027.1\|1089768_1090899_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
LR134292.1\|VEE23003.1\|1075067_1076351_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|235037
LR134292.1\|VEE23001.1\|1074598_1075075_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
LR134292.1\|VEE22989.1\|1070045_1070147_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE22993.1\|1070408_1070645_-\|23S-rRNA-(uracil-5-)-methyltransferase-RumA	unknown	unknown	unknown
LR134292.1\|VEE23019.1\|1087097_1087352_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	unknown	unknown	gnl\|CDD\|224514
LR134292.1\|VEE23025.1\|1089035_1089764_-\|oleoyl-[acyl-carrier-protein]-hydrolase	unknown	unknown	gnl\|CDD\|366738
LR134292.1\|VEE23005.1\|1076484_1078320_-\|GTP-binding-protein-LepA	unknown	unknown	gnl\|CDD\|235462
LR134292.1\|VEE23009.1\|1080626_1081676_-\|CRISPR-associated-protein-Cas7	csn2	cd12217_csn2_CAS-II-A	gnl\|CDD\|213410
LR134292.1\|VEE23023.1\|1088189_1088963_-\|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl\|CDD\|319832
LR134292.1\|VEE23013.1\|1081997_1082909_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
LR134292.1\|VEE22999.1\|1073777_1074602_-\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|237013
LR134292.1\|VEE22997.1\|1072157_1073627_-\|cell-envelope-related-transcriptional-regulator,-LytR-family	unknown	unknown	gnl\|CDD\|224235
LR134292.1\|VEE22995.1\|1070676_1072044_-\|tRNA-(Uracil-5-)-methyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225174
LR134292.1\|VEE22987.1\|1068926_1069631_-\|CAAX-amino-protease-family-protein	unknown	unknown	gnl\|CDD\|376806
LR134292.1\|VEE23017.1\|1086578_1086995_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
LR134292.1\|VEE23015.1\|1083080_1086473_-\|CRISPR-associated-protein	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|273840
LR134292.1\|VEE22991.1\|1070174_1070369_-\|Uncharacterised-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
LR134292.1\|VEE23021.1\|1087540_1088200_-\|integral-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.33997e-63
LR134292.1\|VEE23011.1\|1081672_1081981_-\|CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.77904e-29
LR134292.1\|VEE23027.1\|1089768_1090899_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
LR134292.1\|VEE23003.1\|1075067_1076351_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
LR134292.1\|VEE23001.1\|1074598_1075075_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	7.51153e-62
LR134292.1\|VEE23009.1\|1080626_1081676_-\|CRISPR-associated-protein-Cas7	gnl\|CDD\|213410	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. This family of Csn2 proteins includes Stu0660, the proteins are larger than other (canonical) Csn2 proteins as they have an additional alpha-helical C-terminal domain. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	6.59484e-148
LR134292.1\|VEE23025.1\|1089035_1089764_-\|oleoyl-[acyl-carrier-protein]-hydrolase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	5.52859e-95
LR134292.1\|VEE23019.1\|1087097_1087352_-\|toxin-antitoxin-system,-antitoxin-component,-HicB-family	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	4.74107e-10
LR134292.1\|VEE23005.1\|1076484_1078320_-\|GTP-binding-protein-LepA	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
LR134292.1\|VEE23023.1\|1088189_1088963_-\|haloacid-dehalogenase-like-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.57312e-130
LR134292.1\|VEE23013.1\|1081997_1082909_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	5.90429e-124
LR134292.1\|VEE22999.1\|1073777_1074602_-\|prephenate-dehydratase	gnl\|CDD\|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	7.36438e-148
LR134292.1\|VEE22997.1\|1072157_1073627_-\|cell-envelope-related-transcriptional-regulator,-LytR-family	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.54305e-53
LR134292.1\|VEE22995.1\|1070676_1072044_-\|tRNA-(Uracil-5-)-methyltransferase-family-protein	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	0
LR134292.1\|VEE22987.1\|1068926_1069631_-\|CAAX-amino-protease-family-protein	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.89155e-11
LR134292.1\|VEE23015.1\|1083080_1086473_-\|CRISPR-associated-protein	gnl\|CDD\|273840	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1. CRISPR loci appear to be mobile elements with a wide host range. This model represents a protein found only in CRISPR-containing species, near other CRISPR-associated proteins (cas), as part of the NMENI subtype of CRISPR/Cas locus. The species range so far for this protein is animal pathogens and commensals only.	0
LR134292.1\|VEE23017.1\|1086578_1086995_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	3.63195e-79

>LR134292.1|VEE23005.1|1076484_1078320_-|GTP-binding-protein-LepA
MDIQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFSYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEIEDVIGLDASEAVLASAKAGIGIEEILEQIVEYVPAPAGDVEAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDTIQLMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTVTLADNPAEAPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGDMLEVSNPSEFPDPTKVASIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDENRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSKLVKMDILLNGDKVDALSFIVHNEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDESSKK
>LR134292.1|VEE23003.1|1075067_1076351_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKLLTNVSQLQGTLRVPGDKSISHRSIMFGSLAEGTTTIRDILRGEDVLSTMQVFRDLGVDIQDDGELVTITGVGFDGLKAPKNKLNMGNSGTSIRLISGVLAGQDFTVEMFGDDSLSKRPMDRVTIPLRQMGVEVSGQTERDLPPLTMHGSKALKPIHYQLPVASAQVKSALIFAALQADGESVIIEKEKTRNHTEDMIVQFGGKIDVNGKEIRIKGDQEFTGQDVVVPGDISSAAFWLVAGLIVPNAKVILKNVGINETRTGILDVIKAMGGKMTISDVDDIAKSATITVETSELRGTEIGGEIIPRLIDELPIIALLATQANGTTAIRDAEELKVKETDRIQVVADALNAMGANITPTDDGMIIKGKTPLHGAKINTFGDHRIGMMAAIAALLVSDGDVELERAEAINTSYPSFFNDLEVLSRG
>LR134292.1|VEE23001.1|1074598_1075075_-|shikimate-kinase
MARIIIGFMGSGKSTISSLLDKDYIDMDALITARIGMSIADFFEKEGEAKFREIESQVLAELVNSEHVISTGGGVVISPINRDILAKNGETIYLKADFDTLYDRIKNDTKNMRPLFINNSKEAFKAIFDGRREMYESAANRIIEVAGKTPEEIVEDIG
>LR134292.1|VEE22999.1|1073777_1074602_-|prephenate-dehydratase
MKVGYLGPSGSFTHNVAVKAFPDDERMPFANITEVIKSYEEGVVDYAIIPVENSIEGSVHETLDYLYHQADIEAVAEMIQPIKQQLLATSQDKKIEKIFSHPQAIAQGKKYIKAHYPNTQIEMTASTAYAARYIAENPDEPYAAIAPAAAAKEYGLVIIAKDIQEMDENYTRFWLLGRQNPVFDLPKSQQKLSLAITLQDNLPGALYKALSVFAWRGINLTKIESRPLKTALGEYFFIVDVDNSNEALVACALEELQLLGIDYKTLGNYDVYKL
>LR134292.1|VEE22997.1|1072157_1073627_-|cell-envelope-related-transcriptional-regulator,-LytR-family
MANNRLSRHEELRYQYLLGNLEYLNAQQKEEFDYLYQKKLMSMQQPSNYSSSAYSETYDDQYDDYGYYNDYNNDYYDDYEDSAAYVDYDDYSRYDSYDNQVTSQGLPKYPKFEKVSRPKRKHQKKPKKSSYLDYYEGIDDKPVKKVKKSKKKKRKKRLKHFLQFFAMLIVLVMAGMIYMFFHGVKEVSSGETNYSAAVTEPFNGQDSKDGTNILILGSDKRISQGSSDARTDTIMVLNIGNKEGKVKLVSFMRDTLVNINGVSYNDYANDQKLNVAFNIGEQDESQGAELMRKTLKDNFDINIKYYVMVDFETFAEAINTLFPNGVDIDAKFGTVDGQEVSSVEVPDDLNMRADGTVPNQTIEVGEQKMDGRTLLNYVRFRKDDDGDYGRTQRQQQVISAIVSQIKDPSKLFTGSAAIGKIYALTSTNVSYPFLVKEGLGVVTSGKKGIEQKTIPEEGDWTDDYDMYGGLGISIDFNKYQEELKELGLR
>LR134292.1|VEE22995.1|1070676_1072044_-|tRNA-(Uracil-5-)-methyltransferase-family-protein
MLEKNSIVEVEITDLSHEGAGVAKVDGFVFFVENALPGEKIKMRVLKVKKNIGFGKVEEYLTISEHRNQDLNVDYLRTGIADFGHLAYSEQLKFKRKQVADNLYKTAGISDVEVAETLGMEHPYAYRNKAQVPVRRVNGQLETGFFRKHSHDLMPISDFYIQNKEIDRLINFTRDLLRRFDLKPYDEKEQTGLIRNLVVRRGHYSGEMMLVFVTTRPKIFRIEQIIEKIVTEFPAVKSIVQNINDKNTNAIFGKEFRTLYGKDTIVDSMLGNQYEISARSFYQVNTEMAEKLYQTAINFSDLTADDIVIDAYSGIGTIGLSFAKNVKAVYGVEVIEEAVEDAKRNAALNGITNAHYVADSAEHAMATWSKNGIKPSVILVDPPRKGLTENFIKASVAMQPEKVTYISCNPATMARDIKLYQELGYKLQKVQPVDLFPNTHHVETVVLLSNGEISE
>LR134292.1|VEE22993.1|1070408_1070645_-|23S-rRNA-(uracil-5-)-methyltransferase-RumA
MDITSLRGKATYDQIKGYIEERFGMKVSTLYISQIKRKCGLEVGESYNKSKNEDSKVPVCPPEKEMAIMDALKHFGII
>LR134292.1|VEE22991.1|1070174_1070369_-|Uncharacterised-protein
MKYKYTVLFGILFGVLMSVLWGTVFSSSLGATGYSVGIAFGVAFACCGCLLGYSIDKKNNKKDE
>LR134292.1|VEE22989.1|1070045_1070147_-|Uncharacterised-protein
MQNFGLSMLYFWISYIIVTVIGILHTVFNIYTY
>LR134292.1|VEE22987.1|1068926_1069631_-|CAAX-amino-protease-family-protein
MKKFYEKSEIWFAVMWIIIYVVVMGNLRNNFGDDSVLSFVGLLAIATAITCFIFKNKLGEKYGFVKVKDYKRYLFFIPFIILMSVNFWPGFSVHYALPGQIYAVLTMALVGYVEEVIFRGLLFKAIEKDSVKQAIIISAITFGAGHIINLLTGHAAFDTLLQIAYAIAIGFAFVMVFYKSKSIWPCIITHSFIDVASKFSGESSETLDIVISIVIIVVAGGYALYLGGTATKEL
>LR134292.1|VEE23009.1|1080626_1081676_-|CRISPR-associated-protein-Cas7
MKWHFTHPYKDNLDINFGQFTQIIGQNQQLKYYMWQLLMWYFDGKKYSEEDLSLFNQEEPEILSDGKVLKRKDFKVISISDIQDLLEQMSYKKGTVAFDFMKLKLDTIDVMTEVDGINDRLDRISLTVNQNLNLSIDNVTYHTESCLVTSEQLLSKYFQPYFNYQGRNISFEFVDNETKVMFLLKMLQERLSNDTNNILLIFKNMDDYLDYSSFITICKTITQMTEKFPNFYCTIFPSNESYLYVTKETVEHVTIVSDFIESLFDLDFMYERFIGRYPSNNIPSKSEFLILLQKNASYLFSDQILYISLGVSDMVAIKILNSLYQYDKSVVYPIPEIDPLEISFLKDKD
>LR134292.1|VEE23011.1|1081672_1081981_-|CRISPR-associated-endoribonuclease-Cas2
MRLLCFFDLPMETAQEKRTYRNFRKELIANGFEMLQFSVYYRTCPNRSFANKFYKRLQQSNLPAGNVRLLAVTEKQFSEMTLIVGGKTKQEEVVSNNKLVVI
>LR134292.1|VEE23013.1|1081997_1082909_-|CRISPR-associated-endonuclease-Cas1
MTWRVVHVNQSEKMHLKLDNIVIKKQGEEYTIPLSDISIIVAEGGDTVVTLRLLSALSKFNIALIVCDNEHLPTGIYHAPNGHSRAYKRLQKQLEWSQEQKDKLWQIVTYFKINNQQDVLSLFERDIDAIQLLADYKDHIELGDKTNREGHAAKVYFNELFGKKFTRVTQQEADVINAGLNYGYAILRAQMARIVEGYGLNPLIGIFHRNEYNQFNLVDDLMEPFRQIVDIWVYQNLRDKEYLKYKYRLNLTNLLNANIKYGKENCSVTGAMDKYVQGFIKCIDKKDTSKFFCPVVSSLELES
>LR134292.1|VEE23015.1|1083080_1086473_-|CRISPR-associated-protein
MTNGKILGLDIGVASVGVGIIEAKTGKVIHANSRLFSAANAENNAERRGFRGARRLTRRKKHRVKRVRDLFEKYDILTDFRNLNLNPYELRVKGLTEQLTNEELFAALRTIAKRRGISYLDDAEDDSTGSSDYAKSIDENRRLLKSMTPGQIQLERLEKYGQLRGNFTVYDENGEAHRLINVFSTSDYKNEARKILETQSNYNKQITDEFIEDYIEILTQKRKYYHGPGNEKSRTDYGRYRTDGTTLENIFGILIGKCTFYPDEYRASKASYTAQEYNFLNDLNNLKVPTETGKLSTEQKQYLVDFAKNSKALGAAKLLKEIAKIVECSVDDIKGCREDNKGKPDLHTFEPYRKLKFNLSFIDIDELSRETLDKLADILTLNTEREGIEDAIKRNLPNQFTEEQIVELVNVRRNQSSAFNKGWHSFSVKLMNELIPELYATSEEQMTILTRLEKFKATKKSSKNTKTIDEKEITDEIYNPVVAKSVRQTIKIINAAVKKYGNFDKIVIEMPRDKNADDEKKFIDKKNKENKKEKDDSLKRAAYLYNGTDKLPDDVFHGNKQLATKIRLWYQQGERCLYSGKPILIQDLVHNSNNFEIDHILPLSLSFDDSLANKVLVYAWTNQEKGQRTPYQVIDSMDAAWSFREMKDYVLKQKGIGKKKREYLLTTENIDKIEVKKKFIERNLVDTRYASRVVLNSLQTALKEFGKDTKVSVVRGQFTSQLRRKWKIDKSRETYHHHAVDALIIAASSQLKLWQKQENPMFVDYGENQVINKETGEILSVSDDDYKELVFQPPYQGFVNTISSKAFEDEILFSYQGDSKYNRKVSDATIYSTRKAKLSKDKKEETYVLGKIKDIYSQDGFDVFIKRYKKDKTQFLMYQKDPLTWENVIEVILRDYPSEKLSEDGKKNVKCNPFEEYRRENGLICKYSKKGKGTPIKSLKYYDKKLGNHISITPKESKNDVVLQSLNPWRADLYFNPDTLKYELMGLKYSDLSFEKGTGKYHISQEKYDEIKEKEDIGKKSEFKFTLYRNDLILIKDTESGEQEIYRFLSRTMPQKKHYVELKPYDKEKFNGGQELMQVFGNVANGGQCLKSLNKPNLSIYKVRTDVLGNKFFVKKEGDKPKLDFKNNKK
>LR134292.1|VEE23017.1|1086578_1086995_-|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLVGEVLKRIERRGFKIEKLEMRMATPELLEKHYEDLVDRPFFPLIVDFMTSGPVIAGVMSGEEVITSWRTMMGATNPKESLPGTIRGDFAQAPAEGAATFNIVHGSDSPESVEREIALWFGE
>LR134292.1|VEE23019.1|1087097_1087352_-|toxin-antitoxin-system,-antitoxin-component,-HicB-family
MIKIYPAIFHTETNGSYWVEFSDFAGGTQGDNLEEARRNAKEFLSGVLETYYIEKMPLPDPSNVDTLCTCDGHVEFVEVQLFKF
>LR134292.1|VEE23021.1|1087540_1088200_-|integral-membrane-protein
MKIKIWTLSTWLWLLSLAVLVAIYGAWLIYPLEIDWLKLTLQVTITKDDLLKNFNVLMTYLTNPLSHTLAMPDFPSSASGLKHFGDVKHLFHLAQAVFILLAYPSWHFLKNSRAEKSLFLHQRAFTLAAILPIVIAVAGLLIGFDQFFTLFHEMLFPGDSSWLFNPATDPVIWVLPEEYFMHCFIIFFVAYEAMMLSLVATARKQLNHRLKNNERKDEK
>LR134292.1|VEE23023.1|1088189_1088963_-|haloacid-dehalogenase-like-hydrolase
MTYKGYLIDLDGTIYKGKNRIPAGERFIQRLQERNIPYVLVTNNSTRTPEKVQEMLSTQFNVHTPLETIYTATMATIDYMNDLNRGKTVYVIGETGLKTAIAEAGYVEDTENPAYVVVGLDNDLTYEKLAVATLAIQKGAVFIGTNPDLNIPTERGLMPGAGAINNLLEVATRVKPVYIGKPNAIIMNKALDVLGVKREEAIMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVPTLPVKPDHVLASLDEWNFDEN
>LR134292.1|VEE23025.1|1089035_1089764_-|oleoyl-[acyl-carrier-protein]-hydrolase
MGLSYREKYQVPFYESDINQNMKLPQLLSLVLQVSGKQSLSLGMSDEHIYKTYNLVWIITEYAIEIERLPKYTENIVIETVPTAYNKLFCYRDFNVYSESGEKLLTIHSTFVLMDYDTRKVHPVLDEIVEVYQVEKVKKFLRGPRYEGLENPEETLYHVRFFDLDLNGHVNNSKYLEWMYDVLDVKFLEEYIPHRINLKYVKEVHYGHDIKSRVERVGLTTKHEIVTQGAVRAQALIEWMEK
>LR134292.1|VEE23027.1|1089768_1090899_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLTKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFESYDIKKLRTLYIGGGTPTSITAEQLEYLLTNLTKHLDLSVLEEFTIEANPGDLTEDKIEVLKNSAVNRVSLGVQTFNDKHLKQIGRSHNEAQIYSTIENLKKAGFHNISIDLIYALPGQTMEDVKENVAKAIALDIPHLSLYSLILEHHTVFMNKMRRGKLQLPQEDLEAEMFEYIISELEKNGFEHYEISNFTKPGFESRHNLMYWDNAEYYGVGAGASGYLNGVRYRNRGPIQHYLKAISEGNARLSEETLTKEEMMEEELFLGLRKKSGVSIARFEEKFGVSFEERYGQIVRELCNQGLLVPDDKVVRMTKKGLFLGDTVAERFILE

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Crispr_ID: LR134292_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LR134292_3

1283031-1283312

Orphan

Consensus_repeat	Method
CTACCATTCTATTTTGAATGGTGCTAAAAC	CRISPRCasFinder

4 spacers

csa3

The CRISPR arrays of LR134292_3

>merge|LR134292|3|1283031-1283312|CRISPRCasFinder
CTACCATGTTGTCTTGAATGGTGCTAAAACAAGCGTACTTTCAGCTACGGTTGTAAATAACATTCGCTACCATACCTTTTTGAATGGTTCTAAAACAGATAAGCTGATGCACCAAATTAGTGCATCTATTTACTACCATGTCTTTTTGAACGGCTCTAAAACTTCCGCTCAAATTTGAGCGCTTTACTACCATTCTATTTTGAATGGTGCTAAAACAAATGATTTTGCTGTGTAGTTGTAACTACGCATTCGCTACCATGCTATTTTGAATGGTGCTAAAAC

>LR134292|3|3|1283031-1283312|CRISPRCasFinder
CTACCATGTTGTCTTGAATGGTGCTAAAAC	AAGCGTACTTTCAGCTACGGTTGTAAATAACATTCG
CTACCATACCTTTTTGAATGGTTCTAAAAC	AGATAAGCTGATGCACCAAATTAGTGCATCTATTTA
CTACCATGTCTTTTTGAACGGCTCTAAAAC	TTCCGCTCAAATTTGAGCGCTTTA
CTACCATTCTATTTTGAATGGTGCTAAAAC	AAATGATTTTGCTGTGTAGTTGTAACTACGCATTCG
CTACCATGCTATTTTGAATGGTGCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
LR134292.1\|VEE23402.1\|1287539_1288367_+\|exodeoxyribonuclease	unknown	unknown	gnl\|CDD\|197321
LR134292.1\|VEE23407.1\|1292095_1292437_-\|nitrogen-regulatory-protein-P-II-1	unknown	unknown	gnl\|CDD\|366157
LR134292.1\|VEE23392.1\|1280207_1280483_-\|phage-related-protein	unknown	unknown	unknown
LR134292.1\|VEE23394.1\|1280644_1280839_-\|phage-membrane-protein	unknown	unknown	unknown
LR134292.1\|VEE23395.1\|1281071_1281686_-\|phage-antirepressor-protein	unknown	unknown	gnl\|CDD\|226144
LR134292.1\|VEE23400.1\|1286467_1287091_-\|hemolysis-inducing-protein	unknown	unknown	gnl\|CDD\|379303
LR134292.1\|VEE23390.1\|1277790_1279311_-\|DNA-primase	unknown	unknown	gnl\|CDD\|273716
LR134292.1\|VEE23396.1\|1281749_1281935_-\|repressor-related-protein	unknown	unknown	unknown
LR134292.1\|VEE23397.1\|1282105_1283011_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
LR134292.1\|VEE23406.1\|1291352_1291982_+\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
LR134292.1\|VEE23401.1\|1287077_1287359_-\|putative-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
LR134292.1\|VEE23403.1\|1288407_1288764_-\|Spx/MgsR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|239334
LR134292.1\|VEE23393.1\|1280487_1280631_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE23398.1\|1283368_1284538_+\|Integrase	unknown	unknown	gnl\|CDD\|271189
LR134292.1\|VEE23399.1\|1284712_1286374_-\|cell-shape-determining-protein	unknown	unknown	unknown
LR134292.1\|VEE23388.1\|1277086_1277275_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE23389.1\|1277294_1277450_-\|Uncharacterised-protein	unknown	unknown	unknown
LR134292.1\|VEE23405.1\|1290125_1291217_-\|phosphoserine-aminotransferase	unknown	unknown	gnl\|CDD\|235428
LR134292.1\|VEE23391.1\|1279323_1280211_-\|phage-protein	unknown	unknown	gnl\|CDD\|214926
LR134292.1\|VEE23404.1\|1288851_1290030_-\|D-3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240651

Protein	Function_ID	Function_description	E-value
LR134292.1\|VEE23402.1\|1287539_1288367_+\|exodeoxyribonuclease	gnl\|CDD\|197321	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	4.44067e-115
LR134292.1\|VEE23407.1\|1292095_1292437_-\|nitrogen-regulatory-protein-P-II-1	gnl\|CDD\|366157	pfam00543, P-II, Nitrogen regulatory protein P-II. P-II modulates the activity of glutamine synthetase.	3.18341e-43
LR134292.1\|VEE23391.1\|1279323_1280211_-\|phage-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	2.08496e-15
LR134292.1\|VEE23400.1\|1286467_1287091_-\|hemolysis-inducing-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	3.01363e-16
LR134292.1\|VEE23401.1\|1287077_1287359_-\|putative-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	4.5368e-21
LR134292.1\|VEE23397.1\|1282105_1283011_+\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.44784e-14
LR134292.1\|VEE23406.1\|1291352_1291982_+\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	1.59593e-87
LR134292.1\|VEE23390.1\|1277790_1279311_-\|DNA-primase	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	2.30398e-67
LR134292.1\|VEE23403.1\|1288407_1288764_-\|Spx/MgsR-family-transcriptional-regulator	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	8.76791e-54
LR134292.1\|VEE23398.1\|1283368_1284538_+\|Integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	2.39592e-43
LR134292.1\|VEE23405.1\|1290125_1291217_-\|phosphoserine-aminotransferase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
LR134292.1\|VEE23395.1\|1281071_1281686_-\|phage-antirepressor-protein	gnl\|CDD\|226144	COG3617, COG3617, Prophage antirepressor [Transcription].	3.25545e-37
LR134292.1\|VEE23404.1\|1288851_1290030_-\|D-3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240651	cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	5.32434e-159

>LR134292.1|VEE23397.1|1282105_1283011_+|transcriptional-regulator
MNRLKELRKTTGLTQKSFSKEIGIPLRTLQNWENGESNIKPEKAKLLADYFNVQVPYLLGYSKIRYGAEQITKAIKESVSRKNEQLNNEQLENTIKICEVASFLDMDIELIIQIYEFNSDSNNVSKVETLEDLLGFFQMAANGYNEIYYELGPIDGNSIGFIVDKLEQYGEKLQDYLIEEKIKTDFYSTTGYPLSQATVIPAEKVKKETEKSVSAFNTDFIEFLKYHDLYLSNNEIEKVVNIMYSYSNANDLYLSSLIRDKNLKELRQQKEKDFSELFKYSSLWEMNYESLENKHTPPDND
>LR134292.1|VEE23396.1|1281749_1281935_-|repressor-related-protein
MLITENYAKAIRRKQADMQLTAKQAGEQIGVNHITYRKLRSGGEVRAKTFEKAMAWLVKDY
>LR134292.1|VEE23395.1|1281071_1281686_-|phage-antirepressor-protein
MEKLEQWNGYNIRFVEHNGEWWAVAKDITSALGLKNNSRAISTLKGVTKSYTLTNGGKQQVTIIDEKAIYKLVFKSRKKEAEEFQDWVFEIIKQLRQQTGLEGFQAFRMLDKQHQKNAMTLLSNGLQGVNKEAKPKDMIKANTIANKAISNKYGYPKMVKKSEMTEPMLRDREQVLDETVELMLVKERYGLNFSVANTIYGKTC
>LR134292.1|VEE23394.1|1280644_1280839_-|phage-membrane-protein
MLYQEINLPIWAQLVIMALLILIGIEIAKIKPTEDVKQEIKETYTDHVKERYGAYIQSQGRYYN
>LR134292.1|VEE23393.1|1280487_1280631_-|Uncharacterised-protein
MTDKELFDIAECVKQQATPEELKEFKHLEQHEDRVAWVKNQILKMEV
>LR134292.1|VEE23392.1|1280207_1280483_-|phage-related-protein
MEINLLSNETEQALVSGILSKVGTYLERYENLENPLGIISQREAIERLEITYPTIRRWEARGLKRYTPPIADTKTVYYKVTDLLAFLGVEE
>LR134292.1|VEE23391.1|1279323_1280211_-|phage-protein
MSIYESMGVTNRLLYLYDDKPSERLSAEPFEYVAKFPALEVPEGMVLEEFKKNHAPYCISGKVKKDKDDAYRRNDSNLIYRDLIFLDYDNITITSEEFKATVEKAIGDYSYIIYPTIKHTEEKPRFRLVVKPSEPMNKETYKVVVTEIAEKIGLMYDTASLTWSQLQGLPVTVGKSDDYVKTVHRGKDYPVPKYEASTIKKASTNGYTIRSPNERKSLTVRIIETLFNGFGEEGGRNNACASFVGMLFNRYVNFDIATAYQLTVMANNNTSEPLPEGELDRTFESIAKKELTNRI
>LR134292.1|VEE23390.1|1277790_1279311_-|DNA-primase
MALDIAKLEEEIKEEQQNSDKQPETMNELYILLQQLGKAWREENAYIVNEGQKNERTVTPQPNVSTVAKVLEKHCHFTFIGEGAISDISKLYVYHLDLGYYVSSDDIFRKLLLKYDNRLTSNKFFNELIAYIRTETKIQPPLSDYRYIPVANGVYNIQTKELEEFNPKIIITSKVKTAYNPYAKKPILGGWFDFDKWLATLTCGDKELVTLLWQVMNEAINPNRTRKKMVLLVGDGNNGKGTFQALLENLIGRENISNLKPDQFGKEFYLGALEGKVCNIGDDISNKYLDEVSDLMSVVSGDPVQVNKKGKQPIEARFKLLCIFSGNDLPNARNKTNGWYRRLCIIPFEADFNGEVERPEIKDEFIKDKALLEWILFEILNMADFDKFIEPKAVKEKLTSYKNDNDYIKLWVENYYIPNGWHEVNHVPMFMARNKLKEFAEDLGIDKPKLGKFSNAVMAELERSTPYHYKAKSGTVRREFYDTLDPHGFHRDKFTKGVWGIGLIEK
>LR134292.1|VEE23389.1|1277294_1277450_-|Uncharacterised-protein
MDADLIAYELKELQRNHGLSEQTAMEILKMRQLSNDLNSIRDVLRDIRNTI
>LR134292.1|VEE23388.1|1277086_1277275_-|Uncharacterised-protein
MKIKLFKHEAISDGYYSNGMARYRRENNKELEVRVNEFMADKKVSNVQAYGDNIMVTYEGVK
>LR134292.1|VEE23398.1|1283368_1284538_+|Integrase
MANIKKITKKNGTTVYREQIYLGTDCMTGKQVYTTVSAPTKKELKQKREFKINEFKENGFTRYKSVTVKNYRELSELWLENHKLEVKPQTYSQTVSELRTHLLPVFGDMKVERITLPMVQEFVNKLASNDKLGRVSFRIILSINKRILKYAVNLQIINVNPADNVIVPKNKKNISKKKELKFFETSQLKQFKDYLDSLPNTFKNYYHKTLYLTLLSTGLRIGEAVALEWSDIDLDNGYIDVNKTVAFSRMETNSTKSEAGNRKISIDKNTVLMLRLYKARQYQCFMEHGYSSKMAKYVFSNGFNIYPNRTNLQLVLTKHLKQAGLPRFTFHAFRHTHASLLLNAGISYKELQHRLGHSTLAMTMDTYSHLSKEKEKEAVNFFEKAMANL
>LR134292.1|VEE23399.1|1284712_1286374_-|cell-shape-determining-protein
MKKTISYCLLALWSIVMLASYWMFLPPLNPLSTVFWAFVLEGLALAFGAVLLLSLIGKLQQVTVQMPGTRVRKVVSTPTPKYGKTLSLIGAVIVGIILLLSVSSFFNSRLFRAKSYANVIKVKDADFTSDFPETDISHLALLDRSSAKKIGDTYLGTIDKVSQFGISDDYRQVTIGEQPYRISPLEYKSFWKWFSNHKEGIGYYVKVNQTTGKAELVKLDKGMKYSDSEYFFNDTLRYLRLKYPTAIFGDPSFEVDDQGNPYYVATTYKPKFMLSSSDPTGAILLNAVTGETKRYDLKDIPDWVDRVFSANNVISRVNDYYTYQKGFWNTVFSQTGVKKTTDIYNYISIGSDIYLYTGITSATADSSNLGFILVNMRTREVTNYKLASATETAAQESAEGEVQEKHYEATAPTLVKLDGKAYYLVSLKDAAGLVKSYAIVDAEDYQQVTVDNDIETLIAKFTDSDTSALSDVTKNSDKSAEKVKVITGVVDKLASQMISGSTVYYISSSGEIYKVKATTDTTDSLPFLTVGDQFKGELQKDNYLTKFEITTEK
>LR134292.1|VEE23400.1|1286467_1287091_-|hemolysis-inducing-protein
MKKINKEFLMTSLVIALPVVIGAIFWNQLPEKIPTHFGIDGQADGYSSKFFTLFAFPALFLLFQIICLAFFEKESVKVNIPAKMRRFYSWLIPILSLIIQGSIYANALGFIKCGPTLVTTFLAIVFIVIGNYLPKIQRNATVGIRIPWTLSDDKNWYKTHRMAGKLWVIGGLIILLESFIQVALPYVVGVVIAVMIVGPIVYSFILS
>LR134292.1|VEE23401.1|1287077_1287359_-|putative-transcriptional-regulator
MAFAETFKALSHPIRREILNLLKKKSLTAGEISEQFDVAWATISHHLSILKKAGLVVEKREKNFIYYELSTSVLEDVMAWLVDLKESSKNEKN
>LR134292.1|VEE23402.1|1287539_1288367_+|exodeoxyribonuclease
MKLISWNIDSLNAALTSDSARAVLSRAVIDTLVAEDADIIAIQETKLSAKGPTKKHLQILEDYFPDYQVSWRSSVEPARKGYAGTMFLYKNHLTPTISFPEIGAPDTMDYEGRIITLEFDNFYVTQVYTPNAGDGLKRLAERQIWDEKYADYLAELDQTKPVLATGDYNVAHNEIDLANPNSNRRSAGFTDEERAGFTNLLAKGFTDTFRYLHGDIPNVYSWWAQRSKTSKINNTGWRIDYWLASNRIADKITKSEMIDSGTRQDHTPIVLEIDL
>LR134292.1|VEE23403.1|1288407_1288764_-|Spx/MgsR-family-transcriptional-regulator
MLTFYEYPKCTTCRRAKAELQEMKVEFEAIDLTVDTPKAEEIKAWMENSDFTIKNFFNTSGQAYRALGLKDKVDSLTADEAATILASDGMLIKRPVLVKDGKVLQLGHRKSYEELLGE
>LR134292.1|VEE23404.1|1288851_1290030_-|D-3-phosphoglycerate-dehydrogenase
MVYSVKTFNNINQVGLKELGNQFQIDGDLAENPDAFILRSQNLHGIDFPENLKAIARAGAGTNNIPIADATAAGIVVFNTPGANANAVKEAVLASILMSARDYIAANAWVNTLSGDDVPKQVEAGKKQFAGSEISGKTLGVIGLGAIGGRIANYAQRLGMNVLGYDPYVSIETAWNISHHVKRVDDVKEIFANCDYITVHVPLTDETRHIFNSEAFALMQKGTVVINFARGELVDNAALFEAIEAGVVKRYITDFGTEELLNKEKITVFPHVGGSTAEAELNCAIMAGKTIRRFMETGEITNSVNFPNVHQALTAPYRITLINKNVPNIVAKISTAVSELGINIDNIINRSKGEYAYTLLDLDENDKTKVNHLVENFENSDNIVRVRLIAKK
>LR134292.1|VEE23405.1|1290125_1291217_-|phosphoserine-aminotransferase
MTIYNFSAGPAVLPKPVLEQAQREMLDYQGSGMSVLEMSHRSKEFDDIIKDAEKLLRELMNIPDNYKVMFLQGGASTQFTMLPLNLAKGRKAYYLVGGSWGKKAYAEAVKLSKSVPFEPVLLASSEDTVYDHIPTFDPKDIDPEAAYVHITTNNTIEGTSIYDLPDTNGVPIVADMSSNILAVRYNVEDFALIYAGAQKNIGPAGVTVVIVREDFLNDEPTLSAMLDYRIQAEAGSLYNTPPAYSIYIAKLVFEWVKAFGGVDKMEAANREKSGFLYDFIDQSDFYTNPVKNPAERSVANIPFVTPSKELDAKFVAEATPLGFKNIKGHRSVGGMRASLYNAFPRQGVLDLIEFMKKFEAENK
>LR134292.1|VEE23406.1|1291352_1291982_+|copper-homeostasis-protein-CutC
MIIKEFCAENTTLLSQLDSSVKRVELCDNLAVGGTTPSYGVIKEAARYLHEKDISLATMIRPRGGNFVYNDSELRIMEDDIIRAVELESDSLVLGLLTEDNHIDEDGIEQLLPATQGLPLVFHMAFDQIPEADQKAAIDQLVELGFTRILTHGSSEANDIFENIDYLKELVEYANNRIEIMIGGGVTADNYQELIEKTGAKAAHGTKIC
>LR134292.1|VEE23407.1|1292095_1292437_-|nitrogen-regulatory-protein-P-II-1
MKKIEAIIRPDRLEDLKDALAKAGFAKGMTVSQVLGYGNQRGFAEYVRGQKIVPALLAKVKVEIVTHDAAIDEIVDVISKSVRTGEVGDGKIFIFPVEEVIRIRTGERGGDAV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448877	Streptococcus phage Javan220, complete genome	10842-10871	0	1.0
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	MK448899	Streptococcus phage Javan288, complete genome	22344-22373	1	0.967
LR134292_2	2.19\|1079771\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079771-1079800	30	MK448899	Streptococcus phage Javan288, complete genome	548-577	2	0.933
LR134292_2	2.22\|1079969\|30\|LR134292\|CRISPRCasFinder,CRT	1079969-1079998	30	MK448899	Streptococcus phage Javan288, complete genome	548-577	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH937495	Streptococcus phage CHPC1045, complete genome	2311-2340	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MF580775	Streptococcus phage V2, complete genome	2495-2524	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH937496	Streptococcus phage CHPC1046, complete genome	2298-2327	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MF580760	Streptococcus phage 7T, complete genome	2259-2288	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH892379	Streptococcus phage SWK3, complete genome	2965-2994	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH892359	Streptococcus phage SW10, complete genome	3203-3232	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MF580763	Streptococcus phage 16B8, complete genome	2276-2305	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH892358	Streptococcus phage SW9, complete genome	2992-3021	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MF580772	Streptococcus phage R1, complete genome	2495-2524	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH937497	Streptococcus phage CHPC1048, complete genome	2321-2350	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH892352	Streptococcus phage SW1, complete genome	2894-2923	2	0.933
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MH892380	Streptococcus phage SWK4, complete genome	2965-2994	2	0.933
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448858	Streptococcus phage Javan166, complete genome	12020-12049	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448975	Streptococcus phage Javan526, complete genome	12010-12039	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448782	Streptococcus phage Javan501, complete genome	12349-12378	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705273	Streptococcus phage P7602, complete genome	32804-32833	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937480	Streptococcus phage CHPC954, complete genome	32937-32966	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705278	Streptococcus phage P7952, complete genome	34415-34444	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705280	Streptococcus phage P7954, complete genome	32639-32668	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705272	Streptococcus phage P7601, complete genome	30934-30963	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937491	Streptococcus phage CHPC1037, partial genome	32002-32031	3	0.9
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	NC_004585	Streptococcus prophage 315.2, complete genome	12978-13007	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448966	Streptococcus phage Javan508, complete genome	12833-12862	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448772	Streptococcus phage Javan483, complete genome	12848-12877	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937504	Streptococcus phage CHPC1091, complete genome	31907-31936	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892385	Streptococcus phage SW33, complete genome	34044-34073	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580775	Streptococcus phage V2, complete genome	30963-30992	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937501	Streptococcus phage CHPC1073, complete genome	30455-30484	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KX879641	Streptococcus phage CHPC577, complete genome	29689-29718	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937459	Streptococcus phage CHPC595, complete genome	31061-31090	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705261	Streptococcus phage P5652, complete genome	29902-29931	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705274	Streptococcus phage P7631, complete genome	32462-32491	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH973662	Streptococcus phage SW7, complete genome	32985-33014	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892384	Streptococcus phage SW32, complete genome	34044-34073	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MG708273	Streptococcus phage vB_SthS_VA698, partial genome	33045-33074	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705256	Streptococcus phage P3681, complete genome	32272-32301	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937498	Streptococcus phage CHPC1057, complete genome	32143-32172	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705285	Streptococcus phage P9852, complete genome	31718-31747	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580762	Streptococcus phage 9B4, complete genome	30910-30939	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937489	Streptococcus phage CHPC1034, partial genome	29499-29528	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892360	Streptococcus phage SW11, complete genome	32375-32404	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705270	Streptococcus phage P7573, complete genome	34012-34041	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	NC_007019	Streptococcus phage 2972, complete genome	32465-32494	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705275	Streptococcus phage P7632, complete genome	32286-32315	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	AY699705	Streptococcus thermophilus bacteriophage 2972, complete genome	32465-32494	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580760	Streptococcus phage 7T, complete genome	31550-31579	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892363	Streptococcus phage SW14, complete genome	31704-31733	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892376	Streptococcus phage SW1151, complete genome	31088-31117	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937483	Streptococcus phage CHPC1005, complete genome	33486-33515	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MG708275	Streptococcus phage vB_SthS_VA460, complete genome	14938-14967	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892382	Streptococcus phage SWK6, complete genome	32074-32103	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937492	Streptococcus phage CHPC1040, complete genome	31198-31227	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937486	Streptococcus phage CHPC1027, complete genome	32356-32385	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892359	Streptococcus phage SW10, complete genome	31319-31348	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937500	Streptococcus phage CHPC1067, complete genome	30803-30832	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705267	Streptococcus phage P7154, complete genome	30971-31000	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705287	Streptococcus phage P9854, complete genome	33122-33151	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580771	Streptococcus phage MM25, complete genome	30263-30292	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937487	Streptococcus phage CHPC1029, complete genome	31100-31129	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705264	Streptococcus phage P7134, complete genome	30465-30494	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580763	Streptococcus phage 16B8, complete genome	30318-30347	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705276	Streptococcus phage P7633, complete genome	32055-32084	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892357	Streptococcus phage SW8, complete genome	30941-30970	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892358	Streptococcus phage SW9, complete genome	31138-31167	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705283	Streptococcus phage P8922, complete genome	30973-31002	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580772	Streptococcus phage R1, complete genome	30918-30947	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892378	Streptococcus phage SWK2, complete genome	33469-33498	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937484	Streptococcus phage CHPC1008, complete genome	32123-32152	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705284	Streptococcus phage P9851, complete genome	32000-32029	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892383	Streptococcus phage SW31, complete genome	34044-34073	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MF580764	Streptococcus phage 31B4, complete genome	32863-32892	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705286	Streptococcus phage P9853, complete genome	31419-31448	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY705279	Streptococcus phage P7953, complete genome	32828-32857	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937472	Streptococcus phage CHPC928, complete genome	29956-29985	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892362	Streptococcus phage SW13, complete genome	34061-34090	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH937488	Streptococcus phage CHPC1033, complete genome	33206-33235	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892352	Streptococcus phage SW1, complete genome	31734-31763	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MH892377	Streptococcus phage SWK1, complete genome	32997-33026	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN689509	Lactococcus phage CHPC1175, complete genome	2177-2206	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN689521	Lactococcus phage CHPC836, complete genome	2197-2226	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN689516	Lactococcus phage CHPC148, complete genome	2305-2334	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	NC_004746	Lactococcus phage 4268, complete genome	15957-15986	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	AF323669	Bacteriophage bIL286, complete genome	19661-19690	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN689530	Lactococcus phage CHPC974, partial genome	2292-2321	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	AJ245616	Lactococcus lactis phage BK5-T complete genome	2309-2338	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	AF176025	Lactococcus phage BK5-T, complete genome	2309-2338	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN856033	Myoviridae sp. isolate 312, complete genome	2210-2239	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	AF489521	Lactococcus bacteriophage 4268, complete genome	15957-15986	4	0.867
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	NC_002667	Lactococcus prophage bIL286, complete genome	19661-19690	4	0.867
LR134292_2	2.24\|1080101\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080101-1080130	30	MK448931	Streptococcus phage Javan414, complete genome	3570-3599	4	0.867
LR134292_2	2.25\|1080167\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080167-1080196	30	MK449000	Streptococcus phage Javan64, complete genome	32766-32795	4	0.867
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448798	Streptococcus phage Javan533, complete genome	10059-10088	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448955	Streptococcus phage Javan478, complete genome	11654-11683	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KT388093	Streptococcus phage A25, complete genome	7017-7046	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448783	Streptococcus phage Javan503, complete genome	9974-10003	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	MK448967	Streptococcus phage Javan510, complete genome	10060-10089	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	KY349816	Streptococcus phage Str01, complete genome	32220-32249	5	0.833
LR134292_2	2.11\|1079243\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079243-1079272	30	NC_004588	Streptococcus prophage 315.5, complete genome	10209-10238	5	0.833
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2366398-2366427	5	0.833
LR134292_2	2.3\|1078716\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078716-1078745	30	MN234233	Corynebacterium phage Colleen, complete genome	22666-22695	6	0.8
LR134292_2	2.3\|1078716\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078716-1078745	30	MH271317	Corynebacterium phage TouchMeNot, complete genome	22466-22495	6	0.8
LR134292_2	2.3\|1078716\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078716-1078745	30	MF197383	Corynebacterium phage Poushou, complete genome	22295-22324	6	0.8
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	2120978-2121007	6	0.8
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	76024-76053	6	0.8
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	75095-75124	6	0.8
LR134292_2	2.14\|1079441\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079441-1079470	30	NZ_CP032280	Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence	63273-63302	6	0.8
LR134292_2	2.15\|1079507\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079507-1079536	30	NZ_CP032280	Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence	63273-63302	6	0.8
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	LC556211	Enterobacter cloacae CC32 plasmid pCC32 DNA, complete sequence	175001-175030	6	0.8
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	MN855887	Siphoviridae sp. isolate 442, complete genome	5187-5216	6	0.8
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	MF417900	Uncultured Caudovirales phage clone 8AX_1, partial genome	12896-12931	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	CP016969	Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence	12842-12877	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	MF417899	Uncultured Caudovirales phage clone 7S_8, partial genome	29042-29077	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	NC_007057	Staphylococcus phage 96, complete genome	30391-30426	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	AY954960	Bacteriophage 96, complete genome	30391-30426	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	NC_021332	Staphylococcus phage StauST398-3, complete genome	3586-3621	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	NC_007062	Staphylococcus phage 52A, complete genome	31775-31810	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	AY954965	Bacteriophage 52A, complete genome	31775-31810	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	DQ908929	Staphylococcus phage 80, complete genome	3676-3711	6	0.833
LR134292_3	3.2\|1283127\|36\|LR134292\|CRISPRCasFinder	1283127-1283162	36	MK448890	Streptococcus phage Javan264, complete genome	5808-5843	6	0.833
LR134292_3	3.3\|1283193\|24\|LR134292\|CRISPRCasFinder	1283193-1283216	24	NC_015661	Parageobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH02, complete sequence	8534-8557	6	0.75
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	NC_000872	Streptococcus phage Sfi21, complete genome	27776-27811	6	0.833
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	X95646	Streptococcus thermophilus bacteriophage Sfi21 DNA; lysogeny module, 8141 bp	6622-6657	6	0.833
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	AF115103	Streptococcus thermophilus bacteriophage Sfi21, complete genome	27776-27811	6	0.833
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	KY705271	Streptococcus phage P7574, complete genome	24727-24762	6	0.833
LR134292_2	2.1\|1078584\|30\|LR134292\|CRISPRCasFinder,CRT	1078584-1078613	30	NC_022974	Pseudomonas phage CHA_P1, complete genome	13276-13305	7	0.767
LR134292_2	2.3\|1078716\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078716-1078745	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	1039178-1039207	7	0.767
LR134292_2	2.7\|1078979\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078979-1079008	30	NZ_CP038274	Legionella israelensis strain Bercovier 4 plasmid unnamed1, complete sequence	36264-36293	7	0.767
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013426	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24	34426-34455	7	0.767
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	75995-76024	7	0.767
LR134292_2	2.14\|1079441\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079441-1079470	30	KM226324	Idiomarinaceae phage Phi1M2-2, complete genome	15495-15524	7	0.767
LR134292_2	2.15\|1079507\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079507-1079536	30	KM226324	Idiomarinaceae phage Phi1M2-2, complete genome	15495-15524	7	0.767
LR134292_2	2.27\|1080299\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080299-1080328	30	NZ_CP032697	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence	255736-255765	7	0.767
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	NC_008501	Streptococcus thermophilus LMD-9 plasmid 2, complete sequence	1849-1884	7	0.806
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	NC_019231	Streptococcus thermophilus plasmid pK1002C2, complete sequence	429-464	7	0.806
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	NC_019232	Streptococcus thermophilus plasmid pK2007C6, complete sequence	429-464	7	0.806
LR134292_2	2.1\|1078584\|30\|LR134292\|CRISPRCasFinder,CRT	1078584-1078613	30	LR134252	Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2	141541-141570	8	0.733
LR134292_2	2.4\|1078782\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1078782-1078811	30	MN693806	Marine virus AFVG_250M575, complete genome	26241-26270	8	0.733
LR134292_2	2.10\|1079177\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079177-1079206	30	NZ_CP045124	Acinetobacter indicus strain XG03 plasmid pXG-160kb, complete sequence	116314-116343	8	0.733
LR134292_2	2.10\|1079177\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079177-1079206	30	NZ_CP033753	Acinetobacter baumannii strain FDAARGOS_540 plasmid unnamed1, complete sequence	7858-7887	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	920259-920288	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013699	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C58A-MedDCM-OCT-S31-C30, * SEQUENCING IN PROGRESS *	14285-14314	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013700	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C58A-MedDCM-OCT-S42-C58, * SEQUENCING IN PROGRESS *	10202-10231	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013428	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32	27535-27564	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013429	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C58A-MedDCM-OCT-S43-C47	15461-15490	8	0.733
LR134292_2	2.12\|1079309\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079309-1079338	30	AP013427	Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28	35598-35627	8	0.733
LR134292_2	2.13\|1079375\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1079375-1079404	30	NZ_CP032092	Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed2, complete sequence	108018-108047	8	0.733
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	NZ_LR134438	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 29	29876-29905	8	0.733
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN693512	Marine virus AFVG_25M128, complete genome	34972-35001	8	0.733
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MN693499	Marine virus AFVG_25M513, complete genome	3961-3990	8	0.733
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	KR296694	Salmonella phage 40, complete genome	47638-47667	8	0.733
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	KY705255	Streptococcus phage P0095, complete genome	23453-23488	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580769	Streptococcus phage L5A1, complete genome	26269-26304	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MK202161	Streptococcus phage CHPC1282, complete genome	23442-23477	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580768	Streptococcus phage C0, complete genome	23188-23223	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MK448721	Streptococcus phage Javan263, complete genome	7776-7811	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580766	Streptococcus phage B0, complete genome	25120-25155	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MH892355	Streptococcus phage SW4, complete genome	23956-23991	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MH937494	Streptococcus phage CHPC1042, complete genome	29517-29552	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MH937457	Streptococcus phage CHPC1248, complete genome	27050-27085	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MH892354	Streptococcus phage SW3, complete genome	25913-25948	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580765	Streptococcus phage A0, complete genome	23197-23232	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580759	Streptococcus phage 7A5, complete genome	25317-25352	8	0.778
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	MF580767	Streptococcus phage B5, complete genome	25359-25394	8	0.778
LR134292_2	2.1\|1078584\|30\|LR134292\|CRISPRCasFinder,CRT	1078584-1078613	30	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	55743-55772	9	0.7
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	MT774408	CrAssphage cr130_1, complete genome	80333-80362	9	0.7
LR134292_2	2.23\|1080035\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080035-1080064	30	AB746912	Nitratiruptor phage NrS-1 DNA, complete genome	33017-33046	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	548805-548834	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	314220-314249	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	314260-314289	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	592509-592538	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	139832-139861	9	0.7
LR134292_2	2.28\|1080365\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080365-1080394	30	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	252664-252693	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_CP026276	Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence	278678-278707	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_CP007736	Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-b0b, complete sequence	97966-97995	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_CP026179	Klebsiella pneumoniae strain KPNIH49 plasmid pKPC-224e, complete sequence	141323-141352	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_CP020062	Klebsiella pneumoniae strain AR_0117 plasmid unitig_1, complete sequence	92173-92202	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	CP052437	Klebsiella pneumoniae strain C16KP0108 plasmid pC16KP0108-3, complete sequence	54053-54082	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	CP052353	Klebsiella pneumoniae strain D16KP0146 plasmid pD17KP0032-2, complete sequence	54054-54083	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_CP015396	Klebsiella pneumoniae strain CR14 plasmid pCR14_4, complete sequence	95824-95853	9	0.7
LR134292_2	2.29\|1080431\|30\|LR134292\|CRISPRCasFinder,CRT,PILER-CR	1080431-1080460	30	NZ_MH569712	Serratia marcescens strain S120 plasmid pPM120-2, complete sequence	71782-71811	9	0.7
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	NC_002669	Lactococcus prophage bIL310, complete genome	3691-3726	11	0.694
LR134292_3	3.4\|1283247\|36\|LR134292\|CRISPRCasFinder	1283247-1283282	36	AF323671	Bacteriophage bIL310, complete genome	3691-3726	11	0.694

1. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448877 (Streptococcus phage Javan220, complete genome) position: , mismatch: 0, identity: 1.0

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaattcaaagtaa	Protospacer
******************************

2. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448899 (Streptococcus phage Javan288, complete genome) position: , mismatch: 1, identity: 0.967

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
ttttatagtggtttgaaaccagccactgca	Protospacer
****.*************************

3. spacer 2.19|1079771|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448899 (Streptococcus phage Javan288, complete genome) position: , mismatch: 2, identity: 0.933

cgctgttctaattccagataattcattcct	CRISPR spacer
cgctggtctaattccagataattcatccct	Protospacer
***** ********************.***

4. spacer 2.22|1079969|30|LR134292|CRISPRCasFinder,CRT matches to MK448899 (Streptococcus phage Javan288, complete genome) position: , mismatch: 2, identity: 0.933

cgctgttctaattccagataattcattcct	CRISPR spacer
cgctggtctaattccagataattcatccct	Protospacer
***** ********************.***

5. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937495 (Streptococcus phage CHPC1045, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

6. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580775 (Streptococcus phage V2, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

7. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937496 (Streptococcus phage CHPC1046, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

8. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580760 (Streptococcus phage 7T, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

9. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892379 (Streptococcus phage SWK3, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

10. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892359 (Streptococcus phage SW10, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

11. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580763 (Streptococcus phage 16B8, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

12. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892358 (Streptococcus phage SW9, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

13. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580772 (Streptococcus phage R1, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

14. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937497 (Streptococcus phage CHPC1048, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

15. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892352 (Streptococcus phage SW1, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

16. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892380 (Streptococcus phage SWK4, complete genome) position: , mismatch: 2, identity: 0.933

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ataccatcaatgattgcatcgactacgtca	Protospacer
***********.********.*********

17. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaattcaaaacca	Protospacer
**************************.. *

18. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaattcaaaacca	Protospacer
**************************.. *

19. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaattcaaaacca	Protospacer
**************************.. *

20. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705273 (Streptococcus phage P7602, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

21. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937480 (Streptococcus phage CHPC954, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

22. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705278 (Streptococcus phage P7952, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

23. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705280 (Streptococcus phage P7954, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

24. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705272 (Streptococcus phage P7601, complete genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

25. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937491 (Streptococcus phage CHPC1037, partial genome) position: , mismatch: 3, identity: 0.9

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaattcaaaatca	Protospacer
****************.*********.* *

26. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_004585 (Streptococcus prophage 315.2, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaatccaaaacca	Protospacer
*********************.****.. *

27. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448966 (Streptococcus phage Javan508, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaatccaaaacca	Protospacer
*********************.****.. *

28. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448772 (Streptococcus phage Javan483, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcattaatccaaaacca	Protospacer
*********************.****.. *

29. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937504 (Streptococcus phage CHPC1091, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

30. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892385 (Streptococcus phage SW33, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

31. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580775 (Streptococcus phage V2, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

32. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937501 (Streptococcus phage CHPC1073, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

33. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KX879641 (Streptococcus phage CHPC577, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

34. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937459 (Streptococcus phage CHPC595, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

35. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705261 (Streptococcus phage P5652, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

36. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705274 (Streptococcus phage P7631, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

37. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH973662 (Streptococcus phage SW7, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

38. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892384 (Streptococcus phage SW32, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

39. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MG708273 (Streptococcus phage vB_SthS_VA698, partial genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

40. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705256 (Streptococcus phage P3681, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

41. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937498 (Streptococcus phage CHPC1057, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

42. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705285 (Streptococcus phage P9852, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

43. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580762 (Streptococcus phage 9B4, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

44. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937489 (Streptococcus phage CHPC1034, partial genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

45. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892360 (Streptococcus phage SW11, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

46. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705270 (Streptococcus phage P7573, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

47. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_007019 (Streptococcus phage 2972, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

48. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705275 (Streptococcus phage P7632, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

49. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AY699705 (Streptococcus thermophilus bacteriophage 2972, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

50. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580760 (Streptococcus phage 7T, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

51. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892363 (Streptococcus phage SW14, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

52. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892376 (Streptococcus phage SW1151, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

53. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937483 (Streptococcus phage CHPC1005, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

54. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MG708275 (Streptococcus phage vB_SthS_VA460, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

55. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892382 (Streptococcus phage SWK6, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

56. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937492 (Streptococcus phage CHPC1040, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

57. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937486 (Streptococcus phage CHPC1027, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

58. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892359 (Streptococcus phage SW10, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

59. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937500 (Streptococcus phage CHPC1067, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

60. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705267 (Streptococcus phage P7154, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

61. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705287 (Streptococcus phage P9854, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

62. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580771 (Streptococcus phage MM25, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

63. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937487 (Streptococcus phage CHPC1029, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

64. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705264 (Streptococcus phage P7134, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

65. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580763 (Streptococcus phage 16B8, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

66. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705276 (Streptococcus phage P7633, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

67. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892357 (Streptococcus phage SW8, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

68. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892358 (Streptococcus phage SW9, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

69. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705283 (Streptococcus phage P8922, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

70. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580772 (Streptococcus phage R1, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

71. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892378 (Streptococcus phage SWK2, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

72. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937484 (Streptococcus phage CHPC1008, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

73. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705284 (Streptococcus phage P9851, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

74. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892383 (Streptococcus phage SW31, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

75. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF580764 (Streptococcus phage 31B4, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

76. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705286 (Streptococcus phage P9853, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

77. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY705279 (Streptococcus phage P7953, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

78. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937472 (Streptococcus phage CHPC928, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

79. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892362 (Streptococcus phage SW13, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

80. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH937488 (Streptococcus phage CHPC1033, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

81. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892352 (Streptococcus phage SW1, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

82. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH892377 (Streptococcus phage SWK1, complete genome) position: , mismatch: 4, identity: 0.867

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgaccacagaatcactaattcaaaatca	Protospacer
****** *********.*********.* *

83. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN689509 (Lactococcus phage CHPC1175, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

84. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN689521 (Lactococcus phage CHPC836, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

85. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN689516 (Lactococcus phage CHPC148, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

86. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_004746 (Lactococcus phage 4268, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

87. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AF323669 (Bacteriophage bIL286, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
aaagcatcaataatcgcatcaacaacgtca	Protospacer
* * **********.******** ******

88. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN689530 (Lactococcus phage CHPC974, partial genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

89. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AJ245616 (Lactococcus lactis phage BK5-T complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
aaagcatcaataatcgcatcaacaacgtca	Protospacer
* * **********.******** ******

90. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AF176025 (Lactococcus phage BK5-T, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
aaagcatcaataatcgcatcaacaacgtca	Protospacer
* * **********.******** ******

91. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN856033 (Myoviridae sp. isolate 312, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
attgcatcaataattgcatcaacaacatca	Protospacer
**  ******************* **.***

92. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AF489521 (Lactococcus bacteriophage 4268, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
agagcatctataattgcatcaacaacgtca	Protospacer
* * **** ************** ******

93. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_002667 (Lactococcus prophage bIL286, complete genome) position: , mismatch: 4, identity: 0.867

ataccatcaataattgcatcaactacgtca	CRISPR spacer
aaagcatcaataatcgcatcaacaacgtca	Protospacer
* * **********.******** ******

94. spacer 2.24|1080101|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448931 (Streptococcus phage Javan414, complete genome) position: , mismatch: 4, identity: 0.867

cgtccatcaattccggaaatccgtcatcct	CRISPR spacer
tatccatcaattccggaaacccatcatcct	Protospacer
..*****************.**.*******

95. spacer 2.25|1080167|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK449000 (Streptococcus phage Javan64, complete genome) position: , mismatch: 4, identity: 0.867

agttgttagacacataatcaaataagattt	CRISPR spacer
cattgttagagacataatcaaataggattt	Protospacer
 .******** *************.*****

96. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

97. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

98. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KT388093 (Streptococcus phage A25, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

99. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

100. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

101. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KY349816 (Streptococcus phage Str01, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

102. spacer 2.11|1079243|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 5, identity: 0.833

tatgacaacagaatcattaattcaaagtaa	CRISPR spacer
tatgacaacagaatcactaatccaaaacca	Protospacer
****************.****.****.. *

103. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 5, identity: 0.833

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
tcctgccgtggtttgagaccagccactgca	Protospacer
*..**. *********.*************

104. spacer 2.3|1078716|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN234233 (Corynebacterium phage Colleen, complete genome) position: , mismatch: 6, identity: 0.8

cgttcaaaatcgcaacattcttagcgcctt	CRISPR spacer
cgttcaaaatcgaaacattctaagcctcac	Protospacer
************ ******** *** .* .

105. spacer 2.3|1078716|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MH271317 (Corynebacterium phage TouchMeNot, complete genome) position: , mismatch: 6, identity: 0.8

cgttcaaaatcgcaacattcttagcgcctt	CRISPR spacer
cgttcaaaatcgaaacattctaagcctcac	Protospacer
************ ******** *** .* .

106. spacer 2.3|1078716|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MF197383 (Corynebacterium phage Poushou, complete genome) position: , mismatch: 6, identity: 0.8

cgttcaaaatcgcaacattcttagcgcctt	CRISPR spacer
cgttcaaaatcgaaacattctaagcctcac	Protospacer
************ ******** *** .* .

107. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 6, identity: 0.8

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
tccttccgtggttggaaaccagccactgca	Protospacer
*..* . ****** ****************

108. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 6, identity: 0.8

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
tgctgccgtggttggacaccagccactgca	Protospacer
* .**. ****** ** *************

109. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 6, identity: 0.8

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
tgctgccgtggttggacaccagccactgca	Protospacer
* .**. ****** ** *************

110. spacer 2.14|1079441|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032280 (Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence) position: , mismatch: 6, identity: 0.8

aggtcttgtgtgatttgctcaacatcttca	CRISPR spacer
atctgttgtgcgatttgctcaatatcttga	Protospacer
*  * *****.***********.***** *

111. spacer 2.15|1079507|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032280 (Acinetobacter sp. WCHA55 plasmid p1_010055, complete sequence) position: , mismatch: 6, identity: 0.8

aggtcttgtgtgatttgctcaacatcttca	CRISPR spacer
atctgttgtgcgatttgctcaatatcttga	Protospacer
*  * *****.***********.***** *

112. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to LC556211 (Enterobacter cloacae CC32 plasmid pCC32 DNA, complete sequence) position: , mismatch: 6, identity: 0.8

-ttggtagcattgcctttatcgtcatactct	CRISPR spacer
gcctgt-gcattgcctttatcgtcatgcact	Protospacer
 .. ** *******************.* **

113. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN855887 (Siphoviridae sp. isolate 442, complete genome) position: , mismatch: 6, identity: 0.8

ttggtagcattgcctttatcgtc-atactct	CRISPR spacer
atgatagcatttcctttatcgtcaacacgc-	Protospacer
 **.******* *********** *.** *

114. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to MF417900 (Uncultured Caudovirales phage clone 8AX_1, partial genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataagctgacgcaccaagttagtgcatcaggtca	Protospacer
***********.*******.********** . *.*

115. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to CP016969 (Staphylococcus epidermidis strain DAR1907 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataagctgacgcaccaagttagtgcatcaggtca	Protospacer
***********.*******.********** . *.*

116. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to MF417899 (Uncultured Caudovirales phage clone 7S_8, partial genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataagctgacgcaccaagttagtgcatcaggtca	Protospacer
***********.*******.********** . *.*

117. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to NC_007057 (Staphylococcus phage 96, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

118. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to AY954960 (Bacteriophage 96, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

119. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to NC_021332 (Staphylococcus phage StauST398-3, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

120. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to NC_007062 (Staphylococcus phage 52A, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

121. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to AY954965 (Bacteriophage 52A, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

122. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to DQ908929 (Staphylococcus phage 80, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataggctgatgcaccaaattagtgcgtcaggtca	Protospacer
*****.*********************.** . *.*

123. spacer 3.2|1283127|36|LR134292|CRISPRCasFinder matches to MK448890 (Streptococcus phage Javan264, complete genome) position: , mismatch: 6, identity: 0.833

agataagctgatgcaccaaattagtgcatctattta	CRISPR spacer
agataagctggtgcaccaatttagtgcatcaggtca	Protospacer
**********.******** ********** . *.*

124. spacer 3.3|1283193|24|LR134292|CRISPRCasFinder matches to NC_015661 (Parageobacillus thermoglucosidasius C56-YS93 plasmid pGEOTH02, complete sequence) position: , mismatch: 6, identity: 0.75

--ttccgctcaaatttgagcgcttta	CRISPR spacer
taacgcgctcaaatttgagcgcat--	Protospacer
   . ***************** *

125. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to NC_000872 (Streptococcus phage Sfi21, complete genome) position: , mismatch: 6, identity: 0.833

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacggagctg	Protospacer
 * *************************** * ..*

126. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to X95646 (Streptococcus thermophilus bacteriophage Sfi21 DNA; lysogeny module, 8141 bp) position: , mismatch: 6, identity: 0.833

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacggagctg	Protospacer
 * *************************** * ..*

127. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to AF115103 (Streptococcus thermophilus bacteriophage Sfi21, complete genome) position: , mismatch: 6, identity: 0.833

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacggagctg	Protospacer
 * *************************** * ..*

128. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to KY705271 (Streptococcus phage P7574, complete genome) position: , mismatch: 6, identity: 0.833

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacggagctg	Protospacer
 * *************************** * ..*

129. spacer 2.1|1078584|30|LR134292|CRISPRCasFinder,CRT matches to NC_022974 (Pseudomonas phage CHA_P1, complete genome) position: , mismatch: 7, identity: 0.767

accaaagaatgatatggagcgcaacatagg	CRISPR spacer
tgctcagaatgatatggggcggaacataga	Protospacer
  *  ************.*** *******.

130. spacer 2.3|1078716|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 7, identity: 0.767

cgttcaaaatcgcaacattcttagcgcctt	CRISPR spacer
cattcaaaatcgcaacattgttatcagccc	Protospacer
*.***************** *** *. *..

131. spacer 2.7|1078979|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038274 (Legionella israelensis strain Bercovier 4 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gtgtcaaagtcttggttttgaatgttttta	CRISPR spacer
ctttcaaagtcttgttttttaatgtttggt	Protospacer
 * *********** **** *******

132. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013426 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24) position: , mismatch: 7, identity: 0.767

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tcttcaattctgtctaaaatttctctagct	Protospacer
.** ********************. * .

133. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.767

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
tctctccgtggttcgaaaccagccattgca	Protospacer
*.*. . ******.***********.****

134. spacer 2.14|1079441|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KM226324 (Idiomarinaceae phage Phi1M2-2, complete genome) position: , mismatch: 7, identity: 0.767

aggtcttgtgtgatttgctcaacatcttca	CRISPR spacer
tgctcttgtgtgatttgctcctcatcgtac	Protospacer
 * *****************  **** *

135. spacer 2.15|1079507|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KM226324 (Idiomarinaceae phage Phi1M2-2, complete genome) position: , mismatch: 7, identity: 0.767

aggtcttgtgtgatttgctcaacatcttca	CRISPR spacer
tgctcttgtgtgatttgctcctcatcgtac	Protospacer
 * *****************  **** *

136. spacer 2.27|1080299|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 7, identity: 0.767

tagtacttgtgatagcaccgtcgacaatca	CRISPR spacer
gcggacttgtgatatcactgtcgacaattg	Protospacer
  * ********** ***.*********..

137. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to NC_008501 (Streptococcus thermophilus LMD-9 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.806

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tcttgattttgctgtgtagttgtaactacggagcca	Protospacer
   *************************** * .*.

138. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to NC_019231 (Streptococcus thermophilus plasmid pK1002C2, complete sequence) position: , mismatch: 7, identity: 0.806

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tcttgattttgctgtgtagttgtaactacggagcca	Protospacer
   *************************** * .*.

139. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to NC_019232 (Streptococcus thermophilus plasmid pK2007C6, complete sequence) position: , mismatch: 7, identity: 0.806

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tcttgattttgctgtgtagttgtaactacggagcca	Protospacer
   *************************** * .*.

140. spacer 2.1|1078584|30|LR134292|CRISPRCasFinder,CRT matches to LR134252 (Klebsiella aerogenes strain NCTC9997 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.733

accaaagaatgatatggagcgcaacatagg	CRISPR spacer
cccaaagaatgatatggaccgctatgtgcc	Protospacer
 ***************** *** *..*.

141. spacer 2.4|1078782|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN693806 (Marine virus AFVG_250M575, complete genome) position: , mismatch: 8, identity: 0.733

atagatattgtgttatattcattcctgatt	CRISPR spacer
atagatatgttgttatattcattagaagat	Protospacer
********  *************   .. *

142. spacer 2.10|1079177|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045124 (Acinetobacter indicus strain XG03 plasmid pXG-160kb, complete sequence) position: , mismatch: 8, identity: 0.733

tcatttaaatacccccgtccaatatctgaa	CRISPR spacer
tcatttaaataccaccgtccacgtgcacca	Protospacer
************* *******    *   *

143. spacer 2.10|1079177|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033753 (Acinetobacter baumannii strain FDAARGOS_540 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcatttaaatacccccgtccaatatctgaa	CRISPR spacer
tcatttaaataccaccgtccacgtgcacca	Protospacer
************* *******    *   *

144. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
ttttcaattctgtctacaacttcttgagga	Protospacer
..* ************ **.*******  .

145. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013699 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C58A-MedDCM-OCT-S31-C30, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tctgcaattctatctaaaatttgtctagct	Protospacer
.**********.********** *. * .

146. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013700 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C58A-MedDCM-OCT-S42-C58, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tctgcaattctatctaaaatttgtctagct	Protospacer
.**********.********** *. * .

147. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013428 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tcttctattctgtctaaaatttctctagct	Protospacer
.** * ******************. * .

148. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013429 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C58A-MedDCM-OCT-S43-C47) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tctgcaattctatctaaaatttgtctagct	Protospacer
.**********.********** *. * .

149. spacer 2.12|1079309|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AP013427 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28) position: , mismatch: 8, identity: 0.733

cctgcaattctgtctaaaatttcttgattg	CRISPR spacer
tcttctattctgtctaaaatttctctagct	Protospacer
.** * ******************. * .

150. spacer 2.13|1079375|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032092 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

ttttgtagtggtttgaaaccagccactgca	CRISPR spacer
ctttgtagtggttttgaaccagccaagctg	Protospacer
.************* .*********   ..

151. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134438 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 29) position: , mismatch: 8, identity: 0.733

ataccatcaataattgcatcaactacgtca	CRISPR spacer
tgtgcatcaataatagcatcagctacgcaa	Protospacer
    ********** ******.*****. *

152. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN693512 (Marine virus AFVG_25M128, complete genome) position: , mismatch: 8, identity: 0.733

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ttaccatcaataactgcatcaaaatcagct	Protospacer
 ************.********   *. *

153. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MN693499 (Marine virus AFVG_25M513, complete genome) position: , mismatch: 8, identity: 0.733

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ttaccatcaataactgcatcaaaatcagct	Protospacer
 ************.********   *. *

154. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to KR296694 (Salmonella phage 40, complete genome) position: , mismatch: 8, identity: 0.733

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaatcaacattgccctcatcgtcatactct	Protospacer
  . .*.*******.*.*************

155. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to KY705255 (Streptococcus phage P0095, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

156. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580769 (Streptococcus phage L5A1, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

157. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MK202161 (Streptococcus phage CHPC1282, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacagagcta	Protospacer
 * **************************. * ...

158. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580768 (Streptococcus phage C0, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

159. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MK448721 (Streptococcus phage Javan263, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacagagcta	Protospacer
 * **************************. * ...

160. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580766 (Streptococcus phage B0, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

161. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MH892355 (Streptococcus phage SW4, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacagagcta	Protospacer
 * **************************. * ...

162. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MH937494 (Streptococcus phage CHPC1042, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacagagcta	Protospacer
 * **************************. * ...

163. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MH937457 (Streptococcus phage CHPC1248, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tattgattttgctgtgtagttgtaactacagagcta	Protospacer
 * **************************. * ...

164. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MH892354 (Streptococcus phage SW3, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

165. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580765 (Streptococcus phage A0, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

166. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580759 (Streptococcus phage 7A5, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

167. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to MF580767 (Streptococcus phage B5, complete genome) position: , mismatch: 8, identity: 0.778

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
tactgattttgctgtgtagttataactacgctgcta	Protospacer
 * ******************.*********  ...

168. spacer 2.1|1078584|30|LR134292|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 9, identity: 0.7

accaaagaatgatatggagcgcaacatagg	CRISPR spacer
ggtaaagaatggtatggagcgcaccagctc	Protospacer
. .********.*********** **

169. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to MT774408 (CrAssphage cr130_1, complete genome) position: , mismatch: 9, identity: 0.7

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ttaccatcaataattgtatcaatggtttgt	Protospacer
 ***************.*****. .. *

170. spacer 2.23|1080035|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to AB746912 (Nitratiruptor phage NrS-1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

ataccatcaataattgcatcaactacgtca	CRISPR spacer
ccaccatcaatgattgcatcaacagtagaa	Protospacer
 .*********.*********** ...  *

171. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

172. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

173. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

174. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

175. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

176. spacer 2.28|1080365|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.7

gcgttcctattgtgttcattaactacaggt	CRISPR spacer
aataatttattgttttcattaactacaggc	Protospacer
.    ..****** ***************.

177. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026276 (Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

178. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007736 (Klebsiella pneumoniae subsp. pneumoniae KPNIH27 plasmid pKPN-b0b, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

179. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026179 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPC-224e, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

180. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020062 (Klebsiella pneumoniae strain AR_0117 plasmid unitig_1, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

181. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to CP052437 (Klebsiella pneumoniae strain C16KP0108 plasmid pC16KP0108-3, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

182. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to CP052353 (Klebsiella pneumoniae strain D16KP0146 plasmid pD17KP0032-2, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

183. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015396 (Klebsiella pneumoniae strain CR14 plasmid pCR14_4, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

184. spacer 2.29|1080431|30|LR134292|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH569712 (Serratia marcescens strain S120 plasmid pPM120-2, complete sequence) position: , mismatch: 9, identity: 0.7

ttggtagcattgcctttatcgtcatactct	CRISPR spacer
aaagtgggattgcctttatcgtcataaatg	Protospacer
  .**.* ******************  .

185. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to NC_002669 (Lactococcus prophage bIL310, complete genome) position: , mismatch: 11, identity: 0.694

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
gctagaatttgctgtgtatttgtaactacggagcta	Protospacer
.   ** *********** *********** * ...

186. spacer 3.4|1283247|36|LR134292|CRISPRCasFinder matches to AF323671 (Bacteriophage bIL310, complete genome) position: , mismatch: 11, identity: 0.694

aaatgattttgctgtgtagttgtaactacgcattcg	CRISPR spacer
gctagaatttgctgtgtatttgtaactacggagcta	Protospacer
.   ** *********** *********** * ...

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

261548 : 270853

Bacillus_virus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE21409.1\|261548_262892_+	ATP-dependent RNA helicase	A0A1V0SIR5	Klosneuvirus	4.5e-46	30.5
VEE21411.1\|263056_263881_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
VEE21413.1\|263912_264716_+	amino acid ABC transporter permease	NA	NA	NA	NA
VEE21415.1\|264715_265459_+	polar amino acid transport system ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-29	39.6
VEE21417.1\|265541_265766_+	membrane protein	NA	NA	NA	NA
VEE21419.1\|265832_266747_+	NADPH-dependent thioredoxin reductase	G3MA85	Bacillus_virus	9.4e-88	53.7
VEE21421.1\|266974_268435_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	1.1e-98	41.6
VEE21423.1\|268434_269259_+	NAD+ synthase	G3MA24	Bacillus_virus	1.4e-74	56.0
VEE21426.1\|269515_270853_+	bleomycin hydrolase	R4TV59	Phaeocystis_globosa_virus	2.7e-67	34.5

DBSCAN-SWA_2

352515 : 360489

Streptococcus_phage(100.0%)

integrase

attL 345398:345413|attR 368506:368521

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
345398:345413	attL	NA	NA	NA	NA
VEE21579.1\|352515_353679_-\|integrase	phage integrase family recombinase	A0A1X9I6A9	Streptococcus_phage	4.2e-141	63.6
VEE21581.1\|353762_354299_-	Phage transcriptional regulator	A0A1X9I723	Streptococcus_phage	1.3e-15	45.0
VEE21583.1\|354444_354633_+	DNA-binding phage protein	A0A1X9I5U7	Streptococcus_phage	1.1e-06	46.8
VEE21585.1\|354891_355086_+	phage membrane protein	NA	NA	NA	NA
VEE21587.1\|355097_355241_+	Uncharacterised protein	NA	NA	NA	NA
VEE21589.1\|355495_355762_+	phage protein	A0A1X9I6M4	Streptococcus_phage	1.2e-27	70.5
VEE21591.1\|355783_356650_+	replication protein	A0A2I6QQV2	Streptococcus_phage	1.9e-69	61.1
VEE21593.1\|356666_357512_+	putative phage replication protein	A0A1X9I6C4	Streptococcus_phage	7.1e-82	58.0
VEE21595.1\|357910_358078_+	Uncharacterised protein	NA	NA	NA	NA
VEE21597.1\|358169_358334_+	Uncharacterised protein	NA	NA	NA	NA
VEE21599.1\|358333_359020_+	scaffolding protein	A3F644	Streptococcus_phage	5.1e-46	50.3
VEE21601.1\|359038_360001_+	Uncharacterised protein	NA	NA	NA	NA
VEE21603.1\|360033_360489_+	Uncharacterised protein	A3F638	Streptococcus_phage	4.2e-12	30.8
368506:368521	attR	NA	NA	NA	NA

DBSCAN-SWA_3

452571 : 460265

Staphylococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE21790.1\|452571_453627_+	riboflavin-specific deaminase	A0A2H4PQS8	Staphylococcus_phage	1.4e-39	32.0
VEE21792.1\|453626_454229_+	riboflavin synthase (alpha subunit)	A0A2H4PQS5	Staphylococcus_phage	4.8e-32	38.4
VEE21794.1\|454229_455408_+	GTP cyclohydrolase II/3,4-dihydroxy-2-butanone4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.6e-103	50.0
VEE21796.1\|455420_455882_+	riboflavin synthase subunit beta	A0A2H4PQS3	Staphylococcus_phage	7.9e-43	56.0
VEE21798.1\|455945_456512_-	putative proton-coupled thiamine transporter YuaJ	NA	NA	NA	NA
VEE21800.1\|456755_457718_-	ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	2.6e-128	70.8
VEE21802.1\|457817_459977_-	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.0e-262	61.9
VEE21804.1\|460037_460265_-	glutaredoxin-like protein	A0A0M7REK7	Lactobacillus_phage	3.0e-11	41.0

DBSCAN-SWA_4

635801 : 645467

Streptococcus_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE22149.1\|635801_636866_+	UDP-glucuronate 4-epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	2.8e-35	30.1
VEE22151.1\|636891_637356_+	glycosyltransferase in exopolysaccharide biosynthesis	NA	NA	NA	NA
VEE22153.1\|637369_637873_+	glycosyltransferase in exopolysaccharide biosynthesis	NA	NA	NA	NA
VEE22155.1\|637865_638723_+	glycosyltransferase	NA	NA	NA	NA
VEE22157.1\|638997_640254_-\|transposase	transposase for insertion sequence element IS1557	A0A1S5SBP9	Streptococcus_phage	2.2e-127	56.4
VEE22159.1\|640509_640971_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.2e-36	54.4
VEE22161.1\|640988_641288_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-21	49.5
VEE22163.1\|641803_642007_-	Uncharacterised protein	M1PLB3	Streptococcus_phage	8.6e-10	53.0
VEE22165.1\|642530_642836_-	Uncharacterised protein	NA	NA	NA	NA
VEE22167.1\|642864_644346_-	UDPglucose 6-dehydrogenase	M1I6D5	Acanthocystis_turfacea_Chlorella_virus	6.4e-102	50.1
VEE22169.1\|644612_645467_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.6e-25	35.0

DBSCAN-SWA_5

728477 : 740695

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE22330.1\|728477_729164_+	Pleiotropic regulator of exopolysaccharide synthesis, competence and biofilm formation Ftr, XRE family	E8ZDN4	Streptococcus_phage	3.4e-58	49.6
VEE22332.1\|729165_729369_+	Uncharacterised protein	D0R0A4	Streptococcus_phage	1.3e-10	47.7
VEE22334.1\|729369_730785_+	ImpB/MucB/SamB family protein	M1Q231	Streptococcus_phage	3.4e-201	73.2
VEE22336.1\|730786_731146_+	Uncharacterised protein	A0A1B0RXA8	Streptococcus_phage	4.7e-19	50.4
VEE22338.1\|731142_731352_+	Uncharacterised protein	NA	NA	NA	NA
VEE22340.1\|731448_732126_+	Methylase	A0A2H4YF91	Aeromonas_phage	1.4e-08	34.0
VEE22342.1\|732130_736498_+	reticulocyte binding protein	A0A1V0SEE0	Indivirus	4.3e-29	22.3
VEE22344.1\|736619_738761_+	putative ATP-dependent endonuclease of the OLDfamily	NA	NA	NA	NA
VEE22346.1\|738745_740695_+	DNA helicase	A7KV33	Bacillus_phage	3.0e-14	24.8

DBSCAN-SWA_6

788382 : 823454

Bacillus_virus(20.0%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE22435.1\|788382_788787_-\|transposase	transposase	Q9JMN8	Wolbachia_phage	2.6e-13	32.3
VEE22437.1\|789164_790532_-	NADH oxidase	A0A2K5B2C5	Erysipelothrix_phage	3.8e-08	23.2
VEE22439.1\|790633_791590_-	simple sugar transport system permease	NA	NA	NA	NA
VEE22441.1\|791591_792650_-	sugar ABC transporter, permease protein,putative	NA	NA	NA	NA
VEE22443.1\|792636_794181_-	simple sugar transport system ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-15	26.9
VEE22445.1\|794326_795382_-	ABC transporter, substrat-binding protein	A0A0A7DN02	Lactobacillus_phage	2.4e-47	36.5
VEE22447.1\|795570_796236_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
VEE22449.1\|796737_797319_-	ribosomal RNA small subunit methyltransferase C	NA	NA	NA	NA
VEE22451.1\|797441_798362_+	pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	9.6e-32	33.6
VEE22453.1\|798452_798689_+	putative 30S ribosomal protein S20	NA	NA	NA	NA
VEE22455.1\|798897_800076_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	7.8e-103	50.1
VEE22457.1\|800113_801439_-	putative histidine kinase sensor CiaH	Q8QNA2	Ectocarpus_siliculosus_virus	1.4e-07	34.0
VEE22459.1\|801428_802103_-	DNA-binding response regulator CiaR	NA	NA	NA	NA
VEE22461.1\|802255_804799_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.1e-68	24.7
VEE22463.1\|805007_805661_-	phosphate transport system protein	NA	NA	NA	NA
VEE22465.1\|805692_806451_-	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.9e-19	31.0
VEE22467.1\|806462_807266_-	Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)	G3M9Y6	Bacillus_virus	2.9e-16	29.0
VEE22469.1\|807276_808164_-	phosphate transport system permease	NA	NA	NA	NA
VEE22471.1\|808153_809071_-	phosphate transport system permease	NA	NA	NA	NA
VEE22473.1\|809081_809948_-	phosphate-binding protein pstS	M4QRU1	Synechococcus_phage	5.9e-07	29.6
VEE22476.1\|810080_811391_-	RNA methylase	NA	NA	NA	NA
VEE22478.1\|811693_813049_-	NADPH-dependent glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	4.4e-33	25.0
VEE22480.1\|813062_813395_-\|bacteriocin	bacteriocin transport accessory protein, putative	NA	NA	NA	NA
VEE22482.1\|813408_813732_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
VEE22484.1\|813840_814665_-	zinc transporter, ZIP family	NA	NA	NA	NA
VEE22486.1\|814817_815258_+\|transposase	transposase	NA	NA	NA	NA
VEE22488.1\|815196_815733_+\|transposase	putative transposase, ISSmu1	A0A1B1P773	Bacillus_phage	4.4e-37	46.7
VEE22490.1\|816045_816810_-	inositol monophosphatase family protein	NA	NA	NA	NA
VEE22492.1\|816799_817075_-	hypothetical cytosolic protein	NA	NA	NA	NA
VEE22494.1\|817144_817549_-	transcriptional regulator	NA	NA	NA	NA
VEE22496.1\|817591_818524_-	riboflavin biosynthesis protein RibC	A0A1V0SD03	Indivirus	4.9e-07	36.5
VEE22498.1\|818537_819443_-\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
VEE22500.1\|819507_821019_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA
VEE22502.1\|821153_821750_-	Restriction endonuclease S subunit	NA	NA	NA	NA
VEE22504.1\|821853_822021_-	peptide ABC transporter permease	NA	NA	NA	NA
VEE22506.1\|822161_823454_+\|transposase	IS1167, transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-125	54.9

DBSCAN-SWA_7

874049 : 932047

Streptococcus_phage(40.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE22601.1\|874049_876158_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	3.3e-120	38.7
VEE22603.1\|876415_877102_+	membrane protein	NA	NA	NA	NA
VEE22605.1\|877136_878081_-	homocysteine methyltransferase	NA	NA	NA	NA
VEE22607.1\|878093_879470_-	amino acid transporter	NA	NA	NA	NA
VEE22609.1\|879606_880200_-	GTPase EngB	NA	NA	NA	NA
VEE22611.1\|880209_881439_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.6e-138	59.9
VEE22613.1\|881475_881646_-	membrane protein	NA	NA	NA	NA
VEE22615.1\|881661_882156_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	2.9e-27	43.7
VEE22617.1\|882239_883079_-	thymidylate synthase	U5J9N5	Bacillus_phage	2.2e-83	52.9
VEE22619.1\|883410_884589_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
VEE22621.1\|884575_885850_+	hydroxymethylglutaryl-CoA reductase	NA	NA	NA	NA
VEE22623.1\|885998_886442_+	Domain of uncharacterised function (DUF1836)	NA	NA	NA	NA
VEE22625.1\|886431_887088_+	hemolysin III	NA	NA	NA	NA
VEE22627.1\|887111_888110_-	isopentenyl-diphosphate delta-isomerase	NA	NA	NA	NA
VEE22629.1\|888106_889105_-	phosphomevalonate kinase	NA	NA	NA	NA
VEE22631.1\|889091_890042_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
VEE22633.1\|890023_890902_-	mevalonate kinase	NA	NA	NA	NA
VEE22635.1\|891193_892237_-	putative glutathione S-transferase	NA	NA	NA	NA
VEE22637.1\|892253_893210_-	putative glutathione S-transferase	NA	NA	NA	NA
VEE22639.1\|893206_893353_-	Uncharacterised protein	NA	NA	NA	NA
VEE22641.1\|893354_893840_-	GNAT family acetyltransferase	NA	NA	NA	NA
VEE22643.1\|893849_894704_-	polar amino acid transport system substrate-binding protein	NA	NA	NA	NA
VEE22645.1\|894880_895333_+	Xaa-His dipeptidase	NA	NA	NA	NA
VEE22647.1\|895296_896052_+	dipeptidase	NA	NA	NA	NA
VEE22649.1\|896415_896619_-	Uncharacterised protein	NA	NA	NA	NA
VEE22651.1\|897564_897981_-	putative glutamine amidotransferase	NA	NA	NA	NA
VEE22653.1\|897977_898268_-	glutamine amidotransferase, class 1	NA	NA	NA	NA
VEE22655.1\|898260_898701_-	oligopeptide ABC uptake transporter ATP-binding protein, truncated	Q6GZ03	Mycoplasma_phage	3.0e-07	36.6
VEE22657.1\|898724_899858_-	hippurate amidohydrolase	NA	NA	NA	NA
VEE22659.1\|900168_900282_-	polar amino acid transport system ATP-binding protein	NA	NA	NA	NA
VEE22661.1\|900481_901015_-\|transposase	transposase	NA	NA	NA	NA
VEE22663.1\|901047_901410_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA
VEE22665.1\|901569_901764_-	Uncharacterised protein	NA	NA	NA	NA
VEE22667.1\|902074_902911_+	LysR family transcriptional regulator	NA	NA	NA	NA
VEE22669.1\|902972_903818_+	oxidoreductase, aldo/keto reductase family	A0A2H4PQR8	Staphylococcus_phage	1.1e-55	41.4
VEE22672.1\|903867_904734_-	type III restriction-modification system StyLTI enzyme res	NA	NA	NA	NA
VEE22674.1\|905553_906093_+\|transposase	transposase for insertion sequence element IS1557	A0A1S5SBP9	Streptococcus_phage	3.0e-49	58.4
VEE22676.1\|906218_907388_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	2.6e-10	35.1
VEE22678.1\|907478_908531_-	Uncharacterised protein	NA	NA	NA	NA
VEE22680.1\|908545_909340_-	Uncharacterised protein	NA	NA	NA	NA
VEE22682.1\|909336_909540_-	Uncharacterised protein	NA	NA	NA	NA
VEE22684.1\|909590_910787_-	group 1 glycosyl transferase	NA	NA	NA	NA
VEE22686.1\|910788_912222_-	Wzx	NA	NA	NA	NA
VEE22688.1\|912249_913539_-	Lipid A core - O-antigen ligase and related enzymes	NA	NA	NA	NA
VEE22691.1\|913513_914647_-	exopolysaccharide biosynthesis protein, glycosyltransferase	NA	NA	NA	NA
VEE22693.1\|914693_916070_-	glycosyltransferase in exopolysaccharide biosynthesis	NA	NA	NA	NA
VEE22695.1\|916108_916849_-	protein-tyrosine phosphatase	A0A1X9I5D6	Streptococcus_phage	6.7e-60	53.0
VEE22697.1\|916869_917559_-	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	1.4e-51	51.1
VEE22699.1\|917567_918299_-	capsular polysaccharide biosynthesis protein CpsB	NA	NA	NA	NA
VEE22701.1\|918304_919813_-	capsular polysaccharide biosynthesis transcriptional regulator, LytR family	A0A1X9I5X1	Streptococcus_phage	2.8e-105	50.0
VEE22703.1\|920229_921135_+	transcriptional regulator	NA	NA	NA	NA
VEE22705.1\|921271_922564_+\|transposase	IS1167, transposase	A0A1S5SBP9	Streptococcus_phage	2.3e-124	54.8
VEE22707.1\|922730_923903_-	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
VEE22709.1\|923906_925409_-	exopolysaccharide biosynthesis protein, membrane protein	NA	NA	NA	NA
VEE22711.1\|925401_926415_-	exopolysaccharide biosynthesis protein, glycosyltransferase	E3SJA0	Synechococcus_phage	5.8e-14	31.4
VEE22713.1\|926439_927168_-	exopolysaccharide biosynthesis protein, glycosyltransferase	A0A2K9L2U7	Tupanvirus	3.7e-10	26.0
VEE22715.1\|927338_928007_-	putative acetyl transferase	NA	NA	NA	NA
VEE22717.1\|928085_929183_-	exopolysaccharide biosynthesis protein, glycosyltransferase	NA	NA	NA	NA
VEE22719.1\|929198_929816_-	transcriptional activator in exopolysaccharide biosynthesis	NA	NA	NA	NA
VEE22721.1\|930835_932047_+\|transposase	IS1167, transposase	A0A1S5SBP9	Streptococcus_phage	8.0e-95	53.2

DBSCAN-SWA_8

939903 : 948499

Bacillus_phage(37.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE22739.1\|939903_940248_-	radical SAM domain-containing protein	E7DN68	Pneumococcus_phage	6.3e-21	45.8
VEE22741.1\|940248_940617_-	radical SAM domain-containing protein	E7DN68	Pneumococcus_phage	3.5e-33	50.0
VEE22743.1\|940609_941056_-	6-pyruvoyl tetrahydrobiopterin synthase	J9PV91	Bacillus_phage	1.8e-44	57.5
VEE22745.1\|941055_941709_-	queuosine biosynthesis protein QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.7e-57	51.6
VEE22747.1\|941872_943642_-	ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-58	30.3
VEE22749.1\|943644_945384_-	ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-38	25.6
VEE22751.1\|945428_947297_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.0e-64	32.3
VEE22753.1\|947293_948499_-\|tRNA	tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	4.2e-43	48.5

DBSCAN-SWA_9

1274938 : 1284538

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE23385.1\|1274938_1275124_-	paratox	J7KIW4	Streptococcus_phage	9.5e-16	69.0
VEE23386.1\|1275363_1275777_-	phage protein	NA	NA	NA	NA
VEE23387.1\|1276644_1277085_-	Uncharacterised protein	NA	NA	NA	NA
VEE23388.1\|1277086_1277275_-	Uncharacterised protein	NA	NA	NA	NA
VEE23389.1\|1277294_1277450_-	Uncharacterised protein	NA	NA	NA	NA
VEE23390.1\|1277790_1279311_-	DNA primase	Q9AZI5	Lactococcus_phage	3.2e-72	38.6
VEE23391.1\|1279323_1280211_-	phage protein	A0A1X9I6L2	Streptococcus_phage	1.5e-85	56.8
VEE23392.1\|1280207_1280483_-	phage related protein	NA	NA	NA	NA
VEE23393.1\|1280487_1280631_-	Uncharacterised protein	NA	NA	NA	NA
VEE23394.1\|1280644_1280839_-	phage membrane protein	NA	NA	NA	NA
VEE23395.1\|1281071_1281686_-	phage antirepressor protein	A0A2H4JB17	uncultured_Caudovirales_phage	2.3e-42	46.6
VEE23396.1\|1281749_1281935_-	repressor-related protein	R9QNG3	Lactococcus_phage	2.4e-06	46.7
VEE23397.1\|1282105_1283011_+	transcriptional regulator	A0A1X9I723	Streptococcus_phage	2.9e-12	46.9
VEE23398.1\|1283368_1284538_+	Integrase	A0A1X9I5Y5	Streptococcus_phage	3.2e-88	48.3

DBSCAN-SWA_10

1290125 : 1299864

Streptococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE23405.1\|1290125_1291217_-	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	1.3e-173	81.8
VEE23406.1\|1291352_1291982_+	copper homeostasis protein CutC	NA	NA	NA	NA
VEE23407.1\|1292095_1292437_-	nitrogen regulatory protein P-II 1	NA	NA	NA	NA
VEE23408.1\|1292468_1293704_-	ammonium transporter	NA	NA	NA	NA
VEE23409.1\|1294025_1294892_-	putative S-adenosyl-methionine-dependent methyl transferase, YraL family	M1PLC5	Streptococcus_phage	6.1e-121	76.0
VEE23410.1\|1294901_1295222_-	DNA replication intiation control protein	M1PFV3	Streptococcus_phage	9.1e-30	62.3
VEE23411.1\|1295214_1296015_-	putative PSP1-like protein	NA	NA	NA	NA
VEE23412.1\|1296011_1296887_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.7e-73	49.7
VEE23413.1\|1296900_1297533_-	thymidylate kinase	M1PSC7	Streptococcus_phage	5.5e-71	65.7
VEE23414.1\|1297622_1298282_-	acetoin utilization protein AcuB	M1NSC5	Streptococcus_phage	1.2e-71	64.7
VEE23415.1\|1298389_1299100_-	branched-chain amino acid transport system ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-14	27.4
VEE23416.1\|1299099_1299864_-	branched-chain amino acid transport system ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-16	24.6

DBSCAN-SWA_11

1303822 : 1356150

Staphylococcus_phage(28.57%)

transposase,integrase,protease

attL 1318988:1319005|attR 1345846:1345863

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE23422.1\|1303822_1304413_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	2.7e-56	56.7
VEE23423.1\|1304489_1305194_-	EamA-like transporter family	NA	NA	NA	NA
VEE23424.1\|1305495_1305636_+	LysR family transcriptional regulator	NA	NA	NA	NA
VEE23425.1\|1305659_1306364_+	LysR family transcriptional regulator	NA	NA	NA	NA
VEE23426.1\|1306427_1307057_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
VEE23427.1\|1307216_1308383_-	cystathionine beta-lyase	NA	NA	NA	NA
VEE23428.1\|1308384_1309479_-	cystathionine gamma-synthase	A0A141ZJM2	Faustovirus	1.6e-12	28.8
VEE23429.1\|1309792_1311427_-	polysaccharide transporter (biosynthesis)	NA	NA	NA	NA
VEE23430.1\|1311522_1312974_+	UDP-N-acetylmuramoyl-alanyl-D-glutamate-2, 6-diaminopimelate ligase	NA	NA	NA	NA
VEE23431.1\|1313148_1313931_+	iron complex transport system ATP-binding protein	A0A1V0SE00	Indivirus	3.1e-15	32.4
VEE23432.1\|1313955_1314888_+	iron complex transport system substrate-binding protein	NA	NA	NA	NA
VEE23433.1\|1314917_1315937_+	ferrichrome ABC transporter, permease protein	NA	NA	NA	NA
VEE23434.1\|1315933_1316935_+	iron complex transport system permease protein	NA	NA	NA	NA
VEE23435.1\|1317112_1317769_-	hypothetical cytosolic protein	NA	NA	NA	NA
VEE23436.1\|1317761_1318277_-	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA
VEE23437.1\|1318377_1319109_+	YaaA-like protein	A0A1X9I5I0	Streptococcus_phage	1.5e-67	56.9
1318988:1319005	attL	NA	NA	NA	NA
VEE23438.1\|1319146_1320094_-	putative lipoprotein	NA	NA	NA	NA
VEE23439.1\|1320112_1321288_-	lipoprotein	NA	NA	NA	NA
VEE23440.1\|1321377_1322310_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
VEE23441.1\|1322462_1323080_-	membrane protein	NA	NA	NA	NA
VEE23442.1\|1323140_1323929_-	pyruvate formate lyase activating enzyme	A0A2P0VNQ0	Tetraselmis_virus	6.5e-21	28.0
VEE23443.1\|1324003_1325332_-	putative hemolysin	NA	NA	NA	NA
VEE23444.1\|1325504_1327421_-	Lactose and galactose permease, GPH translocator family	NA	NA	NA	NA
VEE23445.1\|1327612_1328395_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.1e-10	24.0
VEE23446.1\|1328437_1328986_-	SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	1.3e-36	42.5
VEE23447.1\|1328982_1329918_-	radical SAM superfamily protein	A0A2H4PQV5	Staphylococcus_phage	4.7e-34	47.1
VEE23448.1\|1330074_1330410_-\|integrase	Tn5276 integrase	C9E2L6	Enterococcus_phage	7.3e-14	48.4
VEE23449.1\|1330443_1331205_-\|integrase	Tn5276 integrase	C5IUL7	Streptococcus_phage	2.4e-20	28.3
VEE23450.1\|1331265_1331496_-	excisionase	NA	NA	NA	NA
VEE23451.1\|1331611_1332901_+\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	4.8e-122	53.1
VEE23452.1\|1332954_1335504_-	Cna protein B-type domain-containing protein	NA	NA	NA	NA
VEE23453.1\|1336512_1337169_-	membrane associated phosphatase	NA	NA	NA	NA
VEE23454.1\|1337301_1337868_-	membrane protein	NA	NA	NA	NA
VEE23455.1\|1338235_1338781_-	RNA methyltransferase, TrmH family, group 2	NA	NA	NA	NA
VEE23456.1\|1339073_1340921_-	APC family amino acid-polyamine-organocation transporter	NA	NA	NA	NA
VEE23457.1\|1341124_1342474_+	potassium transporter peripheral membrane protein	NA	NA	NA	NA
VEE23458.1\|1342477_1343917_+	potassium uptake protein TrkH	NA	NA	NA	NA
VEE23459.1\|1343937_1344201_-	alpha-hemolysin family protein	A0A2H4PQM5	Staphylococcus_phage	4.5e-19	54.9
VEE23460.1\|1344197_1344923_-	ribosomal large subunit pseudouridine synthase	NA	NA	NA	NA
VEE23461.1\|1344952_1345549_-	segregation and condensation protein B	NA	NA	NA	NA
VEE23462.1\|1345597_1346302_-	segregation and condensation protein A	NA	NA	NA	NA
1345846:1345863	attR	NA	NA	NA	NA
VEE23463.1\|1346301_1347042_-	site-specific recombinase XerD	NA	NA	NA	NA
VEE23464.1\|1347034_1347502_-	putative transcriptional regulator containing CBS domains	NA	NA	NA	NA
VEE23465.1\|1347498_1348020_-	phosphoesterase	NA	NA	NA	NA
VEE23466.1\|1348001_1349018_-	xanthosine triphosphate pyrophosphatase	Q66YC8	Euphorbia_ringspot_virus	1.2e-06	28.6
VEE23467.1\|1349035_1349845_-	glutamate racemase	NA	NA	NA	NA
VEE23468.1\|1350033_1350276_-	signal peptide	NA	NA	NA	NA
VEE23469.1\|1350418_1351660_-	diaminopimelate decarboxylase	NA	NA	NA	NA
VEE23470.1\|1351777_1352470_-	integral membrane protein	NA	NA	NA	NA
VEE23471.1\|1352498_1353002_-	hydrolase	NA	NA	NA	NA
VEE23472.1\|1353098_1353839_-	RNA methyltransferase	NA	NA	NA	NA
VEE23473.1\|1353881_1354160_+	acylphosphatase	NA	NA	NA	NA
VEE23474.1\|1354240_1355158_+	preprotein translocase YidC subunit	NA	NA	NA	NA
VEE23475.1\|1355234_1355675_+\|transposase	transposase	NA	NA	NA	NA
VEE23476.1\|1355613_1356150_+\|transposase	putative transposase, ISSmu1	A0A1B1P773	Bacillus_phage	1.5e-37	46.7

DBSCAN-SWA_12

1723846 : 1733465

Streptococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
VEE23840.1\|1723846_1724482_-	transglycosylase	Q4Z8Z7	Staphylococcus_phage	2.0e-20	73.5
VEE23841.1\|1724696_1725290_-	LysM repeat-containing protein	A0A288TY55	Enterococcus_phage	8.9e-23	78.3
VEE23842.1\|1725539_1726694_-	Integrase	A0A1X9I5Y5	Streptococcus_phage	1.2e-87	47.2
VEE23843.1\|1726895_1727486_-	DNA polymerase III subunit beta	O34051	Streptococcus_phage	5.1e-18	65.7
VEE23844.1\|1727588_1727837_+	transcriptional regulator	A0A1X9I5U7	Streptococcus_phage	4.4e-08	47.5
VEE23845.1\|1728068_1728263_+	phage membrane protein	NA	NA	NA	NA
VEE23846.1\|1728276_1728417_+	Uncharacterised protein	NA	NA	NA	NA
VEE23847.1\|1728421_1728697_+	phage related protein	NA	NA	NA	NA
VEE23848.1\|1728693_1729581_+	phage protein	A0A1X9I6L2	Streptococcus_phage	1.0e-86	57.5
VEE23849.1\|1729593_1731240_+	virulence-associated protein E	A0A1X9I717	Streptococcus_phage	1.7e-151	53.9
VEE23850.1\|1731537_1731726_+	Uncharacterised protein	NA	NA	NA	NA
VEE23851.1\|1731727_1732168_+	Uncharacterised protein	NA	NA	NA	NA
VEE23852.1\|1733279_1733465_+	paratox	J7KIW4	Streptococcus_phage	4.3e-16	70.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LR134292

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection