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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134162 Klebsiella pneumoniae strain NCTC13635 genome assembly, chromosome: 1 1 crisprs RT,DEDDh,csa3,cas3,WYL,DinG 0 0 22 0

Results visualization

1. LR134162
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134162_1 4292627-4292704 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 319636 : 331778 14 Escherichia_phage(83.33%) tRNA NA
DBSCAN-SWA_2 399812 : 438953 69 Shigella_phage(16.98%) portal,tail,capsid,terminase,integrase attL 399653:399667|attR 401454:401468
DBSCAN-SWA_3 712638 : 783929 114 Enterobacteria_phage(18.64%) portal,transposase,tail,capsid,head,terminase,integrase,protease attL 759245:759260|attR 790407:790422
DBSCAN-SWA_4 881411 : 887956 8 Stx2-converting_phage(42.86%) transposase NA
DBSCAN-SWA_5 1089400 : 1098555 9 Pseudomonas_phage(28.57%) NA NA
DBSCAN-SWA_6 1208935 : 1235268 48 Escherichia_phage(21.21%) lysis NA
DBSCAN-SWA_7 1312647 : 1321934 19 Sodalis_phage(100.0%) transposase,protease NA
DBSCAN-SWA_8 1339625 : 1364847 41 Morganella_phage(46.67%) tail,holin NA
DBSCAN-SWA_9 1387594 : 1392682 9 Mycoplasma_phage(16.67%) NA NA
DBSCAN-SWA_10 1524364 : 1530156 9 Escherichia_phage(25.0%) NA NA
DBSCAN-SWA_11 1823201 : 1827479 6 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_12 1875500 : 1883405 9 Clostridium_phage(14.29%) tRNA NA
DBSCAN-SWA_13 2332520 : 2338551 11 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_14 3239579 : 3243863 11 Catovirus(42.86%) tRNA NA
DBSCAN-SWA_15 3725248 : 3730503 9 Streptococcus_phage(57.14%) integrase attL 3724926:3724939|attR 3727196:3727209
DBSCAN-SWA_16 3850571 : 3855745 8 Moraxella_phage(42.86%) protease NA
DBSCAN-SWA_17 3894758 : 3931016 45 uncultured_Mediterranean_phage(28.57%) transposase,integrase,protease attL 3892267:3892284|attR 3915156:3915173
DBSCAN-SWA_18 4060329 : 4069441 17 Planktothrix_phage(33.33%) transposase,holin NA
DBSCAN-SWA_19 4421788 : 4445146 25 Escherichia_phage(21.43%) tRNA,protease NA
DBSCAN-SWA_20 4724353 : 4736408 15 Burkholderia_phage(30.0%) NA NA
DBSCAN-SWA_21 4776163 : 4811548 56 Escherichia_phage(20.0%) tRNA,protease NA
DBSCAN-SWA_22 4991880 : 4998208 7 Hokovirus(60.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage