Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134156 Salmonella enterica subsp. arizonae strain NCTC10047 genome assembly, chromosome: 1 1 crisprs PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG 0 24 14 0

Results visualization

1. LR134156
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134156_1 971253-972682 TypeI-E I-E
23 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 48630-48661 0 1.0
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 22481-22512 0 1.0
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 26611-26642 0 1.0
LR134156_1 1.9|971775|32|LR134156|PILER-CR 971775-971806 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 24353-24384 0 1.0
LR134156_1 1.9|971775|32|LR134156|PILER-CR 971775-971806 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 24732-24763 0 1.0
LR134156_1 1.10|971836|32|LR134156|PILER-CR 971836-971867 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 39142-39173 0 1.0
LR134156_1 1.18|972323|32|LR134156|PILER-CR 972323-972354 32 NZ_CP039495 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence 11602-11633 0 1.0
LR134156_1 1.18|972323|32|LR134156|PILER-CR 972323-972354 32 JQ806764 Salmonella phage vB_SosS_Oslo, complete genome 24942-24973 0 1.0
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 179828-179859 0 1.0
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 65262-65293 0 1.0
LR134156_1 1.25|971769|32|LR134156|CRISPRCasFinder,CRT 971769-971800 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 24353-24384 0 1.0
LR134156_1 1.25|971769|32|LR134156|CRISPRCasFinder,CRT 971769-971800 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 24732-24763 0 1.0
LR134156_1 1.26|971830|32|LR134156|CRISPRCasFinder,CRT 971830-971861 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 39142-39173 0 1.0
LR134156_1 1.34|972317|32|LR134156|CRISPRCasFinder,CRT 972317-972348 32 NZ_CP039495 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence 11602-11633 0 1.0
LR134156_1 1.34|972317|32|LR134156|CRISPRCasFinder,CRT 972317-972348 32 JQ806764 Salmonella phage vB_SosS_Oslo, complete genome 24942-24973 0 1.0
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 179828-179859 0 1.0
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 65262-65293 0 1.0
LR134156_1 1.4|971465|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971465-971496 32 NZ_CP043514 Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed3, complete sequence 15724-15755 1 0.969
LR134156_1 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971526-971557 32 NZ_CP022661 Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-1, complete sequence 102860-102891 1 0.969
LR134156_1 1.18|972323|32|LR134156|PILER-CR 972323-972354 32 CP022016 Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence 247105-247136 1 0.969
LR134156_1 1.34|972317|32|LR134156|CRISPRCasFinder,CRT 972317-972348 32 CP022016 Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence 247105-247136 1 0.969
LR134156_1 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971526-971557 32 NZ_CP026724 Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence 23629-23660 2 0.938
LR134156_1 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971526-971557 32 NZ_CP036244 Escherichia coli strain S65EC plasmid pS65EC, complete sequence 102060-102091 2 0.938
LR134156_1 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971526-971557 32 NZ_KY706108 Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence 13044-13075 2 0.938
LR134156_1 1.10|971836|32|LR134156|PILER-CR 971836-971867 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 12872-12903 2 0.938
LR134156_1 1.10|971836|32|LR134156|PILER-CR 971836-971867 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 36249-36280 2 0.938
LR134156_1 1.10|971836|32|LR134156|PILER-CR 971836-971867 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 116846-116877 2 0.938
LR134156_1 1.26|971830|32|LR134156|CRISPRCasFinder,CRT 971830-971861 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 12872-12903 2 0.938
LR134156_1 1.26|971830|32|LR134156|CRISPRCasFinder,CRT 971830-971861 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 36249-36280 2 0.938
LR134156_1 1.26|971830|32|LR134156|CRISPRCasFinder,CRT 971830-971861 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 116846-116877 2 0.938
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 BK000583 TPA_inf: Enterobacteria phage P22 wild type, complete genome 24266-24297 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 MN161573 UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome 24266-24297 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 AB426868 Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1 24203-24234 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 KR296686 Salmonella phage 22, complete genome 23382-23413 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 L06296 Bacteriophage P22 eaA - eaI genes, complete cds 2955-2986 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 NC_002371 Enterobacteria phage P22 virus, complete genome 24266-24297 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 KR296688 Salmonella phage 34, complete genome 33571-33602 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 AF217253 Bacteriophage P22 complete genome 6017-6048 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 KR296687 Salmonella phage 25, complete genome 33578-33609 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 AB362338 Enterobacteria phage P22 DNA, complete sequence, strain: MSU 24203-24234 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 GQ422451 Enterobacteria phage Phi75, partial genome 5467-5498 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 GQ422450 Enterobacteria phage UAB_Phi20, complete genome 33626-33657 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 AF527608 Bacteriophage P22-pbi, complete sequence 24266-24297 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 BK000583 TPA_inf: Enterobacteria phage P22 wild type, complete genome 24266-24297 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 MN161573 UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome 24266-24297 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 AB426868 Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1 24203-24234 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 KR296686 Salmonella phage 22, complete genome 23382-23413 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 L06296 Bacteriophage P22 eaA - eaI genes, complete cds 2955-2986 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 NC_002371 Enterobacteria phage P22 virus, complete genome 24266-24297 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 KR296688 Salmonella phage 34, complete genome 33571-33602 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 AF217253 Bacteriophage P22 complete genome 6017-6048 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 KR296687 Salmonella phage 25, complete genome 33578-33609 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 AB362338 Enterobacteria phage P22 DNA, complete sequence, strain: MSU 24203-24234 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 GQ422451 Enterobacteria phage Phi75, partial genome 5467-5498 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 GQ422450 Enterobacteria phage UAB_Phi20, complete genome 33626-33657 3 0.906
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 AF527608 Bacteriophage P22-pbi, complete sequence 24266-24297 3 0.906
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 11267-11298 4 0.875
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 37865-37896 4 0.875
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 115237-115268 4 0.875
LR134156_1 1.17|972262|32|LR134156|PILER-CR 972262-972293 32 NC_042346 Salmonella virus BTP1 genome assembly, chromosome: BTP1 21944-21975 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 AGRM01000007 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence 8907-8938 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP029990 Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence 7530-7561 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP030197 Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence 87602-87633 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP030218 Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence 20285-20316 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP030177 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence 72336-72367 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP025255 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence 54912-54943 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 CP053415 Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence 90385-90416 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 CP053327 Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence 98707-98738 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP030289 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence 61911-61942 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP033339 Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence 84558-84589 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP024167 Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence 31273-31304 4 0.875
LR134156_1 1.22|972567|32|LR134156|PILER-CR 972567-972598 32 NZ_CP022118 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence 35777-35808 4 0.875
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 11267-11298 4 0.875
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 37865-37896 4 0.875
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 115237-115268 4 0.875
LR134156_1 1.33|972256|32|LR134156|CRISPRCasFinder,CRT 972256-972287 32 NC_042346 Salmonella virus BTP1 genome assembly, chromosome: BTP1 21944-21975 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 AGRM01000007 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence 8907-8938 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP029990 Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence 7530-7561 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP030197 Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence 87602-87633 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP030218 Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence 20285-20316 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP030177 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence 72336-72367 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP025255 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence 54912-54943 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 CP053415 Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence 90385-90416 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 CP053327 Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence 98707-98738 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP030289 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence 61911-61942 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP033339 Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence 84558-84589 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP024167 Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence 31273-31304 4 0.875
LR134156_1 1.38|972561|32|LR134156|CRISPRCasFinder,CRT 972561-972592 32 NZ_CP022118 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence 35777-35808 4 0.875
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 NZ_CP045343 Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence 22623-22654 6 0.812
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 NZ_CP045343 Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence 22623-22654 6 0.812
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 MN508817 Yersinia phage JC221, partial genome 127742-127773 7 0.781
LR134156_1 1.15|972141|32|LR134156|PILER-CR 972141-972172 32 KX397373 Erwinia phage vB_EamM_Stratton, complete genome 100374-100405 7 0.781
LR134156_1 1.15|972141|32|LR134156|PILER-CR 972141-972172 32 JX316028 Erwinia phage phiEaH2, complete genome 23173-23204 7 0.781
LR134156_1 1.31|972135|32|LR134156|CRISPRCasFinder,CRT 972135-972166 32 KX397373 Erwinia phage vB_EamM_Stratton, complete genome 100374-100405 7 0.781
LR134156_1 1.31|972135|32|LR134156|CRISPRCasFinder,CRT 972135-972166 32 JX316028 Erwinia phage phiEaH2, complete genome 23173-23204 7 0.781
LR134156_1 1.39|972622|32|LR134156|CRISPRCasFinder,CRT 972622-972653 32 MH588547 Caulobacter phage CcrSC, complete genome 101522-101553 7 0.781
LR134156_1 1.39|972622|32|LR134156|CRISPRCasFinder,CRT 972622-972653 32 NC_048047 Caulobacter phage CcrBL9, complete genome 102162-102193 7 0.781
LR134156_1 1.8|971714|32|LR134156|PILER-CR 971714-971745 32 NZ_CP027341 Escherichia coli strain 2015C-3121 plasmid unnamed 18390-18421 8 0.75
LR134156_1 1.15|972141|32|LR134156|PILER-CR 972141-972172 32 KX397366 Erwinia phage vB_EamM_ChrisDB, complete genome 97882-97913 8 0.75
LR134156_1 1.16|972202|31|LR134156|PILER-CR 972202-972232 31 NC_014718 Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence 427872-427902 8 0.742
LR134156_1 1.19|972384|32|LR134156|PILER-CR 972384-972415 32 MN694320 Marine virus AFVG_250M198, complete genome 42924-42955 8 0.75
LR134156_1 1.24|971708|32|LR134156|CRISPRCasFinder,CRT 971708-971739 32 NZ_CP027341 Escherichia coli strain 2015C-3121 plasmid unnamed 18390-18421 8 0.75
LR134156_1 1.31|972135|32|LR134156|CRISPRCasFinder,CRT 972135-972166 32 KX397366 Erwinia phage vB_EamM_ChrisDB, complete genome 97882-97913 8 0.75
LR134156_1 1.32|972196|31|LR134156|CRISPRCasFinder,CRT 972196-972226 31 NC_014718 Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence 427872-427902 8 0.742
LR134156_1 1.35|972378|32|LR134156|CRISPRCasFinder,CRT 972378-972409 32 MN694320 Marine virus AFVG_250M198, complete genome 42924-42955 8 0.75
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 NZ_CP034552 Bacillus cereus ATCC 14579 plasmid unnamed, complete sequence 2123-2154 9 0.719
LR134156_1 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT 971282-971313 32 NC_004721 Bacillus cereus ATCC 14579 plasmid pBClin15, complete sequence 2185-2216 9 0.719
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 NZ_CP013206 Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence 12793-12824 9 0.719
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 NZ_CP011633 Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence 27462-27493 9 0.719
LR134156_1 1.19|972384|32|LR134156|PILER-CR 972384-972415 32 MH651168 Gordonia phage Ashertheman, complete genome 37589-37620 9 0.719
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 NZ_CP013206 Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence 12793-12824 9 0.719
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 NZ_CP011633 Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence 27462-27493 9 0.719
LR134156_1 1.35|972378|32|LR134156|CRISPRCasFinder,CRT 972378-972409 32 MH651168 Gordonia phage Ashertheman, complete genome 37589-37620 9 0.719
LR134156_1 1.39|972622|32|LR134156|CRISPRCasFinder,CRT 972622-972653 32 NZ_CP049252 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence 5757-5788 9 0.719
LR134156_1 1.39|972622|32|LR134156|CRISPRCasFinder,CRT 972622-972653 32 HQ110084 Erwinia phage ENT90, complete genome 27362-27393 9 0.719
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 302191-302222 10 0.688
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 302191-302222 10 0.688
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 NZ_CP035471 Escherichia coli strain U12A plasmid pU12A_D, complete sequence 6141-6172 11 0.656
LR134156_1 1.13|972019|32|LR134156|PILER-CR 972019-972050 32 KX863569 Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence 9261-9292 11 0.656
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 NZ_CP035471 Escherichia coli strain U12A plasmid pU12A_D, complete sequence 6141-6172 11 0.656
LR134156_1 1.29|972013|32|LR134156|CRISPRCasFinder,CRT 972013-972044 32 KX863569 Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence 9261-9292 11 0.656

1. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

ctagggtttcgggtagttttgtttgacgggac	CRISPR spacer
ctagggtttcgggtagttttgtttgacgggac	Protospacer
********************************

2. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctagggtttcgggtagttttgtttgacgggac	CRISPR spacer
ctagggtttcgggtagttttgtttgacgggac	Protospacer
********************************

3. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ctagggtttcgggtagttttgtttgacgggac	CRISPR spacer
ctagggtttcgggtagttttgtttgacgggac	Protospacer
********************************

4. spacer 1.9|971775|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

actaagcttaaaggaagcgggataggtgaaat	CRISPR spacer
actaagcttaaaggaagcgggataggtgaaat	Protospacer
********************************

5. spacer 1.9|971775|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

actaagcttaaaggaagcgggataggtgaaat	CRISPR spacer
actaagcttaaaggaagcgggataggtgaaat	Protospacer
********************************

6. spacer 1.10|971836|32|LR134156|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacgtgtttcctgtaatattgaatatca	Protospacer
********************************

7. spacer 1.18|972323|32|LR134156|PILER-CR matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 0, identity: 1.0

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
tcgccgcgggtagaaatttacagcattgatga	Protospacer
********************************

8. spacer 1.18|972323|32|LR134156|PILER-CR matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 0, identity: 1.0

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
tcgccgcgggtagaaatttacagcattgatga	Protospacer
********************************

9. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tttgcgctcgctgacgtcaacagcttctacgc	Protospacer
********************************

10. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tttgcgctcgctgacgtcaacagcttctacgc	Protospacer
********************************

11. spacer 1.25|971769|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

actaagcttaaaggaagcgggataggtgaaat	CRISPR spacer
actaagcttaaaggaagcgggataggtgaaat	Protospacer
********************************

12. spacer 1.25|971769|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

actaagcttaaaggaagcgggataggtgaaat	CRISPR spacer
actaagcttaaaggaagcgggataggtgaaat	Protospacer
********************************

13. spacer 1.26|971830|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacgtgtttcctgtaatattgaatatca	Protospacer
********************************

14. spacer 1.34|972317|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP039495 (Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000669 plasmid pCFSAN000669_2, complete sequence) position: , mismatch: 0, identity: 1.0

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
tcgccgcgggtagaaatttacagcattgatga	Protospacer
********************************

15. spacer 1.34|972317|32|LR134156|CRISPRCasFinder,CRT matches to JQ806764 (Salmonella phage vB_SosS_Oslo, complete genome) position: , mismatch: 0, identity: 1.0

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
tcgccgcgggtagaaatttacagcattgatga	Protospacer
********************************

16. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tttgcgctcgctgacgtcaacagcttctacgc	Protospacer
********************************

17. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tttgcgctcgctgacgtcaacagcttctacgc	Protospacer
********************************

18. spacer 1.4|971465|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043514 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

caacataactgccatccagaaaggtagaacgc	CRISPR spacer
caacataactgccatccagataggtagaacgc	Protospacer
******************** ***********

19. spacer 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022661 (Salmonella enterica subsp. enterica strain RM11065 plasmid pRM11065-1, complete sequence) position: , mismatch: 1, identity: 0.969

atatccctgactgtcgtcaggagccgtttacc	CRISPR spacer
atatccctgactgttgtcaggagccgtttacc	Protospacer
**************.*****************

20. spacer 1.18|972323|32|LR134156|PILER-CR matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
gcgccgcgggtagaaatttacagcattgatga	Protospacer
 *******************************

21. spacer 1.34|972317|32|LR134156|CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

tcgccgcgggtagaaatttacagcattgatga	CRISPR spacer
gcgccgcgggtagaaatttacagcattgatga	Protospacer
 *******************************

22. spacer 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 2, identity: 0.938

atatccctgactgtcgtcaggagccgtttacc	CRISPR spacer
atatcccggaccgtcgtcaggagccgtttacc	Protospacer
******* ***.********************

23. spacer 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036244 (Escherichia coli strain S65EC plasmid pS65EC, complete sequence) position: , mismatch: 2, identity: 0.938

atatccctgactgtcgtcaggagccgtttacc	CRISPR spacer
atatcccggaccgtcgtcaggagccgtttacc	Protospacer
******* ***.********************

24. spacer 1.5|971526|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 2, identity: 0.938

atatccctgactgtcgtcaggagccgtttacc	CRISPR spacer
atatcccggaccgtcgtcaggagccgtttacc	Protospacer
******* ***.********************

25. spacer 1.10|971836|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

26. spacer 1.10|971836|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

27. spacer 1.10|971836|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

28. spacer 1.26|971830|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

29. spacer 1.26|971830|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

30. spacer 1.26|971830|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

gcgtgacgtgtttcctgtaatattgaatatca	CRISPR spacer
gcgtgacatatttcctgtaatattgaatatca	Protospacer
*******.*.**********************

31. spacer 1.17|972262|32|LR134156|PILER-CR matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

32. spacer 1.17|972262|32|LR134156|PILER-CR matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

33. spacer 1.17|972262|32|LR134156|PILER-CR matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

34. spacer 1.17|972262|32|LR134156|PILER-CR matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

35. spacer 1.17|972262|32|LR134156|PILER-CR matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

36. spacer 1.17|972262|32|LR134156|PILER-CR matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

37. spacer 1.17|972262|32|LR134156|PILER-CR matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

38. spacer 1.17|972262|32|LR134156|PILER-CR matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

39. spacer 1.17|972262|32|LR134156|PILER-CR matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

40. spacer 1.17|972262|32|LR134156|PILER-CR matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

41. spacer 1.17|972262|32|LR134156|PILER-CR matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

42. spacer 1.17|972262|32|LR134156|PILER-CR matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

43. spacer 1.17|972262|32|LR134156|PILER-CR matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

44. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to BK000583 (TPA_inf: Enterobacteria phage P22 wild type, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

45. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to MN161573 (UNVERIFIED: Salmonella virus P22 isolate HT105/1 int-201, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

46. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to AB426868 (Enterobacteria phage P22 DNA, complete genome, strain: ATCC 19585-B1) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

47. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to KR296686 (Salmonella phage 22, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

48. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to L06296 (Bacteriophage P22 eaA - eaI genes, complete cds) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

49. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to NC_002371 (Enterobacteria phage P22 virus, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

50. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to KR296688 (Salmonella phage 34, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

51. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to AF217253 (Bacteriophage P22 complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

52. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to KR296687 (Salmonella phage 25, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

53. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to AB362338 (Enterobacteria phage P22 DNA, complete sequence, strain: MSU) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

54. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to GQ422451 (Enterobacteria phage Phi75, partial genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

55. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to GQ422450 (Enterobacteria phage UAB_Phi20, complete genome) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

56. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to AF527608 (Bacteriophage P22-pbi, complete sequence) position: , mismatch: 3, identity: 0.906

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttccgacgaattcattacgagggcgat	Protospacer
**. *.**************************

57. spacer 1.17|972262|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

58. spacer 1.17|972262|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

59. spacer 1.17|972262|32|LR134156|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

60. spacer 1.17|972262|32|LR134156|PILER-CR matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggcatttctgacgaattcattacgagggcgat	Protospacer
**  *.**.***********************

61. spacer 1.22|972567|32|LR134156|PILER-CR matches to AGRM01000007 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

62. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

63. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP030197 (Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

64. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP030218 (Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

65. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP030177 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

66. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP025255 (Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

67. spacer 1.22|972567|32|LR134156|PILER-CR matches to CP053415 (Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

68. spacer 1.22|972567|32|LR134156|PILER-CR matches to CP053327 (Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

69. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP030289 (Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

70. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP033339 (Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

71. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP024167 (Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

72. spacer 1.22|972567|32|LR134156|PILER-CR matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
ttcgttctggctgacgtcaacagcttctacgc	Protospacer
**.*. ** ***********************

73. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

74. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

75. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggaatttctgacgaattcattacgagggcgat	Protospacer
**. *.**.***********************

76. spacer 1.33|972256|32|LR134156|CRISPRCasFinder,CRT matches to NC_042346 (Salmonella virus BTP1 genome assembly, chromosome: BTP1) position: , mismatch: 4, identity: 0.875

gggctctccgacgaattcattacgagggcgat	CRISPR spacer
ggcatttctgacgaattcattacgagggcgat	Protospacer
**  *.**.***********************

77. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to AGRM01000007 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

78. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

79. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP030197 (Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

80. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP030218 (Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

81. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP030177 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

82. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP025255 (Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

83. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to CP053415 (Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

84. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to CP053327 (Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

85. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP030289 (Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

86. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP033339 (Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

87. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP024167 (Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
tacgccctggctgacgtcaacagcttctacgc	Protospacer
* .** ** ***********************

88. spacer 1.38|972561|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

tttgcgctcgctgacgtcaacagcttctacgc	CRISPR spacer
ttcgttctggctgacgtcaacagcttctacgc	Protospacer
**.*. ** ***********************

89. spacer 1.13|972019|32|LR134156|PILER-CR matches to NZ_CP045343 (Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence) position: , mismatch: 6, identity: 0.812

ggtttgcagaaagcgccccgga-gggcgcagat	CRISPR spacer
tttttgcagaaagcgccgcagaggggcgcagg-	Protospacer
  *************** *.** ********. 

90. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP045343 (Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence) position: , mismatch: 6, identity: 0.812

ggtttgcagaaagcgccccgga-gggcgcagat	CRISPR spacer
tttttgcagaaagcgccgcagaggggcgcagg-	Protospacer
  *************** *.** ********. 

91. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to MN508817 (Yersinia phage JC221, partial genome) position: , mismatch: 7, identity: 0.781

ctagggtttcgggtagttttgtttg--acgggac	CRISPR spacer
aaaggatttcgggtagttctgtttgttaccgg--	Protospacer
  ***.************.******  ** **  

92. spacer 1.15|972141|32|LR134156|PILER-CR matches to KX397373 (Erwinia phage vB_EamM_Stratton, complete genome) position: , mismatch: 7, identity: 0.781

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
taattgtcataatcggtattcaggaataccga	Protospacer
** . *. ************ ********** 

93. spacer 1.15|972141|32|LR134156|PILER-CR matches to JX316028 (Erwinia phage phiEaH2, complete genome) position: , mismatch: 7, identity: 0.781

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
taattgtcataatcggtattcaggaataccga	Protospacer
** . *. ************ ********** 

94. spacer 1.31|972135|32|LR134156|CRISPRCasFinder,CRT matches to KX397373 (Erwinia phage vB_EamM_Stratton, complete genome) position: , mismatch: 7, identity: 0.781

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
taattgtcataatcggtattcaggaataccga	Protospacer
** . *. ************ ********** 

95. spacer 1.31|972135|32|LR134156|CRISPRCasFinder,CRT matches to JX316028 (Erwinia phage phiEaH2, complete genome) position: , mismatch: 7, identity: 0.781

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
taattgtcataatcggtattcaggaataccga	Protospacer
** . *. ************ ********** 

96. spacer 1.39|972622|32|LR134156|CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 7, identity: 0.781

ctgccggtcaggctgctgaagttactgtggtc	CRISPR spacer
ccgccggtcaggctgctgaagatgctgcctgc	Protospacer
*.******************* *.***.   *

97. spacer 1.39|972622|32|LR134156|CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 7, identity: 0.781

ctgccggtcaggctgctgaagttactgtggtc	CRISPR spacer
ccgccggtcaggctgctgaagatgctgcccgc	Protospacer
*.******************* *.***.   *

98. spacer 1.8|971714|32|LR134156|PILER-CR matches to NZ_CP027341 (Escherichia coli strain 2015C-3121 plasmid unnamed) position: , mismatch: 8, identity: 0.75

cagaacaagacagtctgtgcaggttctcaggg	CRISPR spacer
tggatcaagacagtctgcgcaggttgacaaga	Protospacer
..** ************.*******  **.*.

99. spacer 1.15|972141|32|LR134156|PILER-CR matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 8, identity: 0.75

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
tactgagcataatcggtattcaggaagaccga	Protospacer
**..*.  ************ ***** **** 

100. spacer 1.16|972202|31|LR134156|PILER-CR matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.742

gtaccaacaaaaatatcgagcagttaggcga	CRISPR spacer
cagccaacaaaaatatcaaacagttagccag	Protospacer
  .**************.*.******* *..

101. spacer 1.19|972384|32|LR134156|PILER-CR matches to MN694320 (Marine virus AFVG_250M198, complete genome) position: , mismatch: 8, identity: 0.75

gaaagatgccggctgcctgcggccagtacatc	CRISPR spacer
ggatccggtcggctgccttcggccagtagatc	Protospacer
*.*    *.********* ********* ***

102. spacer 1.24|971708|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP027341 (Escherichia coli strain 2015C-3121 plasmid unnamed) position: , mismatch: 8, identity: 0.75

cagaacaagacagtctgtgcaggttctcaggg	CRISPR spacer
tggatcaagacagtctgcgcaggttgacaaga	Protospacer
..** ************.*******  **.*.

103. spacer 1.31|972135|32|LR134156|CRISPRCasFinder,CRT matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 8, identity: 0.75

tatcggcgataatcggtattgaggaataccgt	CRISPR spacer
tactgagcataatcggtattcaggaagaccga	Protospacer
**..*.  ************ ***** **** 

104. spacer 1.32|972196|31|LR134156|CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 8, identity: 0.742

gtaccaacaaaaatatcgagcagttaggcga	CRISPR spacer
cagccaacaaaaatatcaaacagttagccag	Protospacer
  .**************.*.******* *..

105. spacer 1.35|972378|32|LR134156|CRISPRCasFinder,CRT matches to MN694320 (Marine virus AFVG_250M198, complete genome) position: , mismatch: 8, identity: 0.75

gaaagatgccggctgcctgcggccagtacatc	CRISPR spacer
ggatccggtcggctgccttcggccagtagatc	Protospacer
*.*    *.********* ********* ***

106. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034552 (Bacillus cereus ATCC 14579 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ctagggtttcgggtagttttgtttgacgggac	CRISPR spacer
gacgtgtttcgggtcggtttgtttgacggtga	Protospacer
   * ********* * ************ . 

107. spacer 1.1|971282|32|LR134156|PILER-CR,CRISPRCasFinder,CRT matches to NC_004721 (Bacillus cereus ATCC 14579 plasmid pBClin15, complete sequence) position: , mismatch: 9, identity: 0.719

ctagggtttcgggtagttttgtttgacgggac	CRISPR spacer
gacgtgtttcgggtcggtttgtttgacggtga	Protospacer
   * ********* * ************ . 

108. spacer 1.13|972019|32|LR134156|PILER-CR matches to NZ_CP013206 (Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence) position: , mismatch: 9, identity: 0.719

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
atattgaagaaagcaccccggagggctaaaaa	Protospacer
.  *** *******.***********  *.* 

109. spacer 1.13|972019|32|LR134156|PILER-CR matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 9, identity: 0.719

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
tatttgcaggaagcgacccggagggagtcttt	Protospacer
 .*******.***** ********* *.   *

110. spacer 1.19|972384|32|LR134156|PILER-CR matches to MH651168 (Gordonia phage Ashertheman, complete genome) position: , mismatch: 9, identity: 0.719

gaaagatgccggctgcctgcggccagtacatc	CRISPR spacer
cgcagatgccgcgtgcctgcggccagccggtc	Protospacer
 . ********  *************.  .**

111. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP013206 (Paenibacillus sp. IHB B 3084 plasmid pHD03, complete sequence) position: , mismatch: 9, identity: 0.719

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
atattgaagaaagcaccccggagggctaaaaa	Protospacer
.  *** *******.***********  *.* 

112. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 9, identity: 0.719

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
tatttgcaggaagcgacccggagggagtcttt	Protospacer
 .*******.***** ********* *.   *

113. spacer 1.35|972378|32|LR134156|CRISPRCasFinder,CRT matches to MH651168 (Gordonia phage Ashertheman, complete genome) position: , mismatch: 9, identity: 0.719

gaaagatgccggctgcctgcggccagtacatc	CRISPR spacer
cgcagatgccgcgtgcctgcggccagccggtc	Protospacer
 . ********  *************.  .**

114. spacer 1.39|972622|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP049252 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

ctgccggtcaggctgctgaagttactgtggtc	CRISPR spacer
ctgtcggtcaggatgctgaagttctcgaaggt	Protospacer
***.******** ********** ..* .* .

115. spacer 1.39|972622|32|LR134156|CRISPRCasFinder,CRT matches to HQ110084 (Erwinia phage ENT90, complete genome) position: , mismatch: 9, identity: 0.719

ctgccggtcaggctgctgaagttactgtggtc	CRISPR spacer
ctgtcggtcaggctgcggaagtttattccttt	Protospacer
***.************ ******  * .  *.

116. spacer 1.13|972019|32|LR134156|PILER-CR matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.688

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
gcgacatcgaaagcgccggggagggcgcagac	Protospacer
*   ... *********  ************.

117. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.688

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
gcgacatcgaaagcgccggggagggcgcagac	Protospacer
*   ... *********  ************.

118. spacer 1.13|972019|32|LR134156|PILER-CR matches to NZ_CP035471 (Escherichia coli strain U12A plasmid pU12A_D, complete sequence) position: , mismatch: 11, identity: 0.656

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
taccaacaaaaagcgccccggaaggcgcattg	Protospacer
 ... .**.*************.******   

119. spacer 1.13|972019|32|LR134156|PILER-CR matches to KX863569 (Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence) position: , mismatch: 11, identity: 0.656

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
taccaacaaaaagcgccccggaaggcgcattg	Protospacer
 ... .**.*************.******   

120. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to NZ_CP035471 (Escherichia coli strain U12A plasmid pU12A_D, complete sequence) position: , mismatch: 11, identity: 0.656

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
taccaacaaaaagcgccccggaaggcgcattg	Protospacer
 ... .**.*************.******   

121. spacer 1.29|972013|32|LR134156|CRISPRCasFinder,CRT matches to KX863569 (Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence) position: , mismatch: 11, identity: 0.656

ggtttgcagaaagcgccccggagggcgcagat	CRISPR spacer
taccaacaaaaagcgccccggaaggcgcattg	Protospacer
 ... .**.*************.******   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 102203 : 109756 9 Morganella_phage(83.33%) integrase attL 95162:95175|attR 112260:112273
DBSCAN-SWA_2 132830 : 139961 7 Synechococcus_phage(16.67%) NA NA
DBSCAN-SWA_3 347313 : 406390 83 Cronobacter_phage(48.65%) holin,plate,terminase,capsid,tail,portal,integrase,tRNA attL 345893:345907|attR 358673:358687
DBSCAN-SWA_4 1153157 : 1223127 94 Salmonella_phage(64.06%) plate,terminase,capsid,tail,portal,integrase,tRNA attL 1188038:1188095|attR 1219719:1219776
DBSCAN-SWA_5 1448649 : 1506625 82 Salmonella_phage(57.14%) holin,protease,capsid,tail,portal,coat NA
DBSCAN-SWA_6 1757661 : 1765811 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_7 1828953 : 1836016 10 Synechococcus_phage(66.67%) NA NA
DBSCAN-SWA_8 1911531 : 1939837 26 Escherichia_phage(28.57%) integrase,transposase attL 1924418:1924432|attR 1940491:1940505
DBSCAN-SWA_9 2080864 : 2086467 9 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_10 2501484 : 2529752 44 Salmonella_phage(40.0%) tail,plate,holin NA
DBSCAN-SWA_11 3001364 : 3024308 25 Shigella_phage(14.29%) integrase,transposase attL 2999455:2999470|attR 3014472:3014487
DBSCAN-SWA_12 3216147 : 3291444 105 Vibrio_phage(25.45%) plate,tRNA,holin,protease,terminase,tail,portal,integrase,head attL 3220354:3220369|attR 3293606:3293621
DBSCAN-SWA_13 3884338 : 3922574 60 Streptomyces_phage(40.0%) protease,tRNA NA
DBSCAN-SWA_14 4265778 : 4282365 23 Enterobacteria_phage(100.0%) integrase attL 4259112:4259129|attR 4284558:4284575
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage