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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
LR134151 Serratia plymuthica strain NCTC8900 genome assembly, chromosome: 1 3 crisprs DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,WYL,DinG,csa3,c2c9_V-U4 0 49 3 0

Results visualization

1. LR134151
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134151_1 467761-470441 TypeI-E I-E
71 spacers
cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134151_2 479457-481315 TypeI-E I-E
30 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
LR134151_3 1448958-1449073 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
LR134151_2 2.5|479738|32|LR134151|PILER-CR 479738-479769 32 MT843276 Serratia phage vB_SspS_OS31, complete genome 34498-34529 0 1.0
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 MT843275 Serratia phage vB_SspM_BZS1, complete genome 37795-37826 0 1.0
LR134151_2 2.29|479729|32|LR134151|CRISPRCasFinder,CRT 479729-479760 32 MT843276 Serratia phage vB_SspS_OS31, complete genome 34498-34529 0 1.0
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 MT843275 Serratia phage vB_SspM_BZS1, complete genome 37795-37826 0 1.0
LR134151_2 2.21|480714|32|LR134151|PILER-CR 480714-480745 32 MT843275 Serratia phage vB_SspM_BZS1, complete genome 6380-6411 2 0.938
LR134151_2 2.24|480897|32|LR134151|PILER-CR 480897-480928 32 MT843276 Serratia phage vB_SspS_OS31, complete genome 35361-35392 2 0.938
LR134151_2 2.45|480705|32|LR134151|CRISPRCasFinder,CRT 480705-480736 32 MT843275 Serratia phage vB_SspM_BZS1, complete genome 6380-6411 2 0.938
LR134151_2 2.48|480888|32|LR134151|CRISPRCasFinder,CRT 480888-480919 32 MT843276 Serratia phage vB_SspS_OS31, complete genome 35361-35392 2 0.938
LR134151_1 1.13|468522|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468522-468553 32 KC460990 Serratia phage Eta, complete genome 15502-15533 3 0.906
LR134151_1 1.7|468156|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468156-468187 32 MK813940 Aeromonas phage 4_L372X, complete genome 24511-24542 5 0.844
LR134151_1 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468339-468370 32 AP013469 Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C56-MedDCM-OCT-S38-C52 7973-8004 7 0.781
LR134151_1 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468339-468370 32 AP013470 Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C56A-MedDCM-OCT-S32-C59 95-126 7 0.781
LR134151_1 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468339-468370 32 AP013751 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C56A-MedDCM-OCT-S46-C59, *** SEQUENCING IN PROGRESS *** 4571-4602 7 0.781
LR134151_1 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468705-468736 32 NZ_CP010589 Phaeobacter gallaeciensis strain P11 plasmid pP11_a, complete sequence 39451-39482 7 0.781
LR134151_1 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468705-468736 32 NZ_CP021041 Phaeobacter gallaeciensis strain P129 plasmid pP129_a, complete sequence 39468-39499 7 0.781
LR134151_1 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468705-468736 32 NZ_CP010674 Phaeobacter gallaeciensis strain P75 plasmid pP75_a, complete sequence 39451-39482 7 0.781
LR134151_1 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468705-468736 32 NC_023138 Phaeobacter gallaeciensis DSM 26640 plasmid pGal_A255, complete sequence 39523-39554 7 0.781
LR134151_1 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468705-468736 32 NZ_CP010637 Phaeobacter gallaeciensis strain P73 plasmid pP73_a, complete sequence 39451-39482 7 0.781
LR134151_1 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468766-468797 32 NZ_CP033895 Serratia liquefaciens strain FG3 plasmid p2-125, complete sequence 45543-45574 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 MT366947 Bacillus phage Hyb2phi3Ts-SPbeta, complete genome 97434-97465 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 KY030782 Bacillus phage phi3T, complete genome 97429-97460 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 NC_001884 Bacillus phage SPBc2, complete genome 106852-106883 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 AF020713 Bacteriophage SPBc2 complete genome 106852-106883 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 MT366946 Bacillus phage Hyb1phi3Ts-SPbeta, complete genome 100033-100064 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 MT366948 Bacillus phage Hyb3phi3Ts-SPbeta, complete genome 96181-96212 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 MT601274 Bacillus phage vB_BsuS-Goe13, complete genome 97374-97405 7 0.781
LR134151_1 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 470014-470045 32 MT366945 Bacillus phage phi3Ts, complete genome 97434-97465 7 0.781
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MT498043 Arthrobacter phage Jinkies, complete genome 14608-14639 7 0.781
LR134151_2 2.8|479921|32|LR134151|PILER-CR 479921-479952 32 NZ_CP018813 Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence 12439-12470 7 0.781
LR134151_2 2.9|479982|32|LR134151|PILER-CR 479982-480013 32 NZ_CP018813 Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence 12439-12470 7 0.781
LR134151_2 2.20|480653|32|LR134151|PILER-CR 480653-480684 32 MH622942 Microviridae sp. isolate ctcb16, complete genome 4990-5021 7 0.781
LR134151_2 2.20|480653|32|LR134151|PILER-CR 480653-480684 32 NZ_CP009683 Francisella tularensis subsp. novicida strain AZ06-7470 plasmid pFNE_1, complete sequence 1840-1871 7 0.781
LR134151_2 2.32|479912|32|LR134151|CRISPRCasFinder,CRT 479912-479943 32 NZ_CP018813 Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence 12439-12470 7 0.781
LR134151_2 2.33|479973|32|LR134151|CRISPRCasFinder,CRT 479973-480004 32 NZ_CP018813 Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence 12439-12470 7 0.781
LR134151_2 2.44|480644|32|LR134151|CRISPRCasFinder,CRT 480644-480675 32 MH622942 Microviridae sp. isolate ctcb16, complete genome 4990-5021 7 0.781
LR134151_2 2.44|480644|32|LR134151|CRISPRCasFinder,CRT 480644-480675 32 NZ_CP009683 Francisella tularensis subsp. novicida strain AZ06-7470 plasmid pFNE_1, complete sequence 1840-1871 7 0.781
LR134151_1 1.5|468034|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468034-468065 32 NZ_AP018282 Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome 76804-76835 8 0.75
LR134151_1 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468339-468370 32 NZ_CP037908 Escherichia coli strain LHM10-1 plasmid unnamed4, complete sequence 5339-5370 8 0.75
LR134151_1 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468400-468431 32 KC801932 Escherichia phage Lw1, complete genome 28364-28395 8 0.75
LR134151_1 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468400-468431 32 MT334653 Buttiauxella phage vB_ButM_GuL6, complete genome 27569-27600 8 0.75
LR134151_1 1.14|468583|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468583-468614 32 KM659092 Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence 82618-82649 8 0.75
LR134151_1 1.15|468644|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468644-468675 32 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 636960-636991 8 0.75
LR134151_1 1.20|468949|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468949-468980 32 NZ_CP021767 Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence 262611-262642 8 0.75
LR134151_1 1.31|469648|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 469648-469679 32 NZ_CP018865 Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence 141635-141666 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MF373843 Mycobacterium phage StevieRay, complete genome 38530-38561 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MN010757 Mycobacterium phage HUHilltop, complete genome 36738-36769 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MK820639 Mycobacterium phage Phineas, complete genome 37073-37104 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MF133446 Mycobacterium phage Bogie, complete genome 38481-38512 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 MK937604 Mycobacterium phage Necropolis, complete genome 36104-36135 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 NC_041969 Mycobacterium phage Jebeks, complete genome 36035-36066 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 NC_026605 Mycobacterium phage Malithi, complete genome 35948-35979 8 0.75
LR134151_1 1.44|469437|32|LR134151|CRT 469437-469468 32 KU985090 Mycobacterium phage Shipwreck, complete genome 38512-38543 8 0.75
LR134151_2 2.8|479921|32|LR134151|PILER-CR 479921-479952 32 NZ_LR134445 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence 47540-47571 8 0.75
LR134151_2 2.8|479921|32|LR134151|PILER-CR 479921-479952 32 MH513984 Mycobacterium phage Steamy, complete genome 317-348 8 0.75
LR134151_2 2.9|479982|32|LR134151|PILER-CR 479982-480013 32 NZ_LR134445 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence 47540-47571 8 0.75
LR134151_2 2.9|479982|32|LR134151|PILER-CR 479982-480013 32 MH513984 Mycobacterium phage Steamy, complete genome 317-348 8 0.75
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 NZ_CP039967 Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence 23844-23875 8 0.75
LR134151_2 2.20|480653|32|LR134151|PILER-CR 480653-480684 32 MN694783 Marine virus AFVG_250M759, complete genome 45206-45237 8 0.75
LR134151_2 2.28|479669|31|LR134151|CRISPRCasFinder,CRT 479669-479699 31 MN013086 Klebsiella phage vB_Kpn_Chronis, complete genome 14578-14608 8 0.742
LR134151_2 2.32|479912|32|LR134151|CRISPRCasFinder,CRT 479912-479943 32 NZ_LR134445 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence 47540-47571 8 0.75
LR134151_2 2.32|479912|32|LR134151|CRISPRCasFinder,CRT 479912-479943 32 MH513984 Mycobacterium phage Steamy, complete genome 317-348 8 0.75
LR134151_2 2.33|479973|32|LR134151|CRISPRCasFinder,CRT 479973-480004 32 NZ_LR134445 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence 47540-47571 8 0.75
LR134151_2 2.33|479973|32|LR134151|CRISPRCasFinder,CRT 479973-480004 32 MH513984 Mycobacterium phage Steamy, complete genome 317-348 8 0.75
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 NZ_CP039967 Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence 23844-23875 8 0.75
LR134151_2 2.44|480644|32|LR134151|CRISPRCasFinder,CRT 480644-480675 32 MN694783 Marine virus AFVG_250M759, complete genome 45206-45237 8 0.75
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP012498 Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence 167736-167768 8 0.758
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP012501 Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence 63381-63413 8 0.758
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP012500 Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence 203405-203437 8 0.758
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP042296 Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence 83121-83153 8 0.758
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP012499 Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence 77834-77866 8 0.758
LR134151_1 1.6|468095|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468095-468126 32 AP021850 Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome 74290-74321 9 0.719
LR134151_1 1.8|468217|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468217-468248 32 NZ_CP016084 Streptomyces sp. SAT1 plasmid unnamed4, complete sequence 56202-56233 9 0.719
LR134151_1 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468400-468431 32 MN508622 UNVERIFIED: Enterobacter phage EC-W2, complete genome 23627-23658 9 0.719
LR134151_1 1.22|469071|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 469071-469102 32 MN812722 Vibrio phage NF, complete genome 6675-6706 9 0.719
LR134151_1 1.22|469071|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 469071-469102 32 MN694433 Marine virus AFVG_250M1159, complete genome 2738-2769 9 0.719
LR134151_1 1.25|469254|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 469254-469285 32 NZ_CP044508 Chryseobacterium sp. strain SNU WT7 plasmid unnamed1, complete sequence 7612-7643 9 0.719
LR134151_1 1.38|470075|33|LR134151|CRISPRCasFinder,CRT,PILER-CR 470075-470107 33 NZ_CP016620 Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence 448609-448641 9 0.727
LR134151_2 2.8|479921|32|LR134151|PILER-CR 479921-479952 32 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 126551-126582 9 0.719
LR134151_2 2.9|479982|32|LR134151|PILER-CR 479982-480013 32 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 126551-126582 9 0.719
LR134151_2 2.14|480287|32|LR134151|PILER-CR 480287-480318 32 MG700548 Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence 19784-19815 9 0.719
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 81399-81430 9 0.719
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 166420-166451 9 0.719
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 351997-352028 9 0.719
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 NZ_CP022359 Shewanella bicestrii strain JAB-1 plasmid pSHE-CTX-M, complete sequence 82824-82855 9 0.719
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 NC_008573 Shewanella sp. ANA-3 plasmid unnamed1, complete sequence 227318-227349 9 0.719
LR134151_2 2.22|480775|32|LR134151|PILER-CR 480775-480806 32 NZ_CP017473 Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence 42558-42589 9 0.719
LR134151_2 2.32|479912|32|LR134151|CRISPRCasFinder,CRT 479912-479943 32 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 126551-126582 9 0.719
LR134151_2 2.33|479973|32|LR134151|CRISPRCasFinder,CRT 479973-480004 32 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 126551-126582 9 0.719
LR134151_2 2.38|480278|32|LR134151|CRISPRCasFinder,CRT 480278-480309 32 MG700548 Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence 19784-19815 9 0.719
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 81399-81430 9 0.719
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 166420-166451 9 0.719
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 LT599585 Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid 351997-352028 9 0.719
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 NZ_CP022359 Shewanella bicestrii strain JAB-1 plasmid pSHE-CTX-M, complete sequence 82824-82855 9 0.719
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 NC_008573 Shewanella sp. ANA-3 plasmid unnamed1, complete sequence 227318-227349 9 0.719
LR134151_2 2.46|480766|32|LR134151|CRISPRCasFinder,CRT 480766-480797 32 NZ_CP017473 Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence 42558-42589 9 0.719
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 NZ_CP050082 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence 707253-707284 9 0.719
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 NZ_CP053208 Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence 609084-609115 9 0.719
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP022280 Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence 87379-87411 9 0.727
LR134151_2 2.54|481254|33|LR134151|CRISPRCasFinder,CRT 481254-481286 33 NZ_CP024249 Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence 100725-100757 9 0.727
LR134151_1 1.3|467912|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 467912-467943 32 NZ_CP032695 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence 143060-143091 10 0.688
LR134151_1 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468766-468797 32 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 93297-93328 10 0.688
LR134151_1 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT 468766-468797 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1652573-1652604 10 0.688
LR134151_1 1.27|469376|32|LR134151|CRISPRCasFinder,CRT,CRT 469376-469407 32 MN480763 Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence 88274-88305 10 0.688
LR134151_1 1.29|469526|32|LR134151|CRISPRCasFinder,CRT,PILER-CR 469526-469557 32 NZ_CP017304 Rhodococcus sp. YL-1 plasmid pYLL2 sequence 221260-221291 10 0.688
LR134151_2 2.7|479860|32|LR134151|PILER-CR 479860-479891 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 613774-613805 10 0.688
LR134151_2 2.10|480043|32|LR134151|PILER-CR 480043-480074 32 MF766045 Streptomyces phage Daudau, complete genome 12195-12226 10 0.688
LR134151_2 2.12|480165|32|LR134151|PILER-CR 480165-480196 32 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 151607-151638 10 0.688
LR134151_2 2.12|480165|32|LR134151|PILER-CR 480165-480196 32 NZ_AP022334 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence 244285-244316 10 0.688
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1982609-1982640 10 0.688
LR134151_2 2.22|480775|32|LR134151|PILER-CR 480775-480806 32 NC_015383 Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence 119265-119296 10 0.688
LR134151_2 2.24|480897|32|LR134151|PILER-CR 480897-480928 32 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 14838-14869 10 0.688
LR134151_2 2.24|480897|32|LR134151|PILER-CR 480897-480928 32 CP040467 Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence 4215-4246 10 0.688
LR134151_2 2.31|479851|32|LR134151|CRISPRCasFinder,CRT 479851-479882 32 NZ_CP029830 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence 613774-613805 10 0.688
LR134151_2 2.34|480034|32|LR134151|CRISPRCasFinder,CRT 480034-480065 32 MF766045 Streptomyces phage Daudau, complete genome 12195-12226 10 0.688
LR134151_2 2.36|480156|32|LR134151|CRISPRCasFinder,CRT 480156-480187 32 NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 151607-151638 10 0.688
LR134151_2 2.36|480156|32|LR134151|CRISPRCasFinder,CRT 480156-480187 32 NZ_AP022334 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence 244285-244316 10 0.688
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1982609-1982640 10 0.688
LR134151_2 2.46|480766|32|LR134151|CRISPRCasFinder,CRT 480766-480797 32 NC_015383 Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence 119265-119296 10 0.688
LR134151_2 2.48|480888|32|LR134151|CRISPRCasFinder,CRT 480888-480919 32 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 14838-14869 10 0.688
LR134151_2 2.48|480888|32|LR134151|CRISPRCasFinder,CRT 480888-480919 32 CP040467 Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence 4215-4246 10 0.688
LR134151_2 2.52|481132|32|LR134151|CRISPRCasFinder,CRT 481132-481163 32 NZ_CP021805 Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence 255711-255742 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 MN508624 UNVERIFIED: Enterobacter phage EC-F2, complete genome 44751-44782 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 MN101223 Klebsiella phage KOX10, complete genome 138811-138842 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 MT157285 Klebsiella phage P-KP2, complete genome 121341-121372 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 KT001919 Klebsiella phage Miro, complete genome 86928-86959 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 KT001918 Klebsiella phage Matisse, complete genome 87253-87284 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 JN882287 Cronobacter phage vB_CsaM_GAP161, complete genome 86278-86309 10 0.688
LR134151_2 2.53|481193|32|LR134151|CRISPRCasFinder,CRT 481193-481224 32 GU295964 Klebsiella phage KP15, complete genome 86199-86230 10 0.688
LR134151_2 2.17|480470|32|LR134151|PILER-CR 480470-480501 32 NZ_CP038636 Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence 591226-591257 11 0.656
LR134151_2 2.24|480897|32|LR134151|PILER-CR 480897-480928 32 NZ_CP027023 Streptomyces sp. WAC00288 plasmid p1, complete sequence 153369-153400 11 0.656
LR134151_2 2.41|480461|32|LR134151|CRISPRCasFinder,CRT 480461-480492 32 NZ_CP038636 Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence 591226-591257 11 0.656
LR134151_2 2.48|480888|32|LR134151|CRISPRCasFinder,CRT 480888-480919 32 NZ_CP027023 Streptomyces sp. WAC00288 plasmid p1, complete sequence 153369-153400 11 0.656

1. spacer 2.5|479738|32|LR134151|PILER-CR matches to MT843276 (Serratia phage vB_SspS_OS31, complete genome) position: , mismatch: 0, identity: 1.0

ttaaaataattcgtttgtatggtgtgttaggc	CRISPR spacer
ttaaaataattcgtttgtatggtgtgttaggc	Protospacer
********************************

2. spacer 2.17|480470|32|LR134151|PILER-CR matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 0, identity: 1.0

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctggtgctgatcaagatagccgacaacgctaa	Protospacer
********************************

3. spacer 2.29|479729|32|LR134151|CRISPRCasFinder,CRT matches to MT843276 (Serratia phage vB_SspS_OS31, complete genome) position: , mismatch: 0, identity: 1.0

ttaaaataattcgtttgtatggtgtgttaggc	CRISPR spacer
ttaaaataattcgtttgtatggtgtgttaggc	Protospacer
********************************

4. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 0, identity: 1.0

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctggtgctgatcaagatagccgacaacgctaa	Protospacer
********************************

5. spacer 2.21|480714|32|LR134151|PILER-CR matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 2, identity: 0.938

ggttagatcaggatactggcgactggatgcta	CRISPR spacer
ggttagatcaggatactggcgcctggatgctg	Protospacer
********************* *********.

6. spacer 2.24|480897|32|LR134151|PILER-CR matches to MT843276 (Serratia phage vB_SspS_OS31, complete genome) position: , mismatch: 2, identity: 0.938

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
tgggaatttcgcccaggcacaccgcatcaaga	Protospacer
********************.********.**

7. spacer 2.45|480705|32|LR134151|CRISPRCasFinder,CRT matches to MT843275 (Serratia phage vB_SspM_BZS1, complete genome) position: , mismatch: 2, identity: 0.938

ggttagatcaggatactggcgactggatgcta	CRISPR spacer
ggttagatcaggatactggcgcctggatgctg	Protospacer
********************* *********.

8. spacer 2.48|480888|32|LR134151|CRISPRCasFinder,CRT matches to MT843276 (Serratia phage vB_SspS_OS31, complete genome) position: , mismatch: 2, identity: 0.938

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
tgggaatttcgcccaggcacaccgcatcaaga	Protospacer
********************.********.**

9. spacer 1.13|468522|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to KC460990 (Serratia phage Eta, complete genome) position: , mismatch: 3, identity: 0.906

gtaaaaaccatgggtgccagcccgctgagtgg	CRISPR spacer
ataaaaacgatgggtgccagcccactgagtgg	Protospacer
.******* **************.********

10. spacer 1.7|468156|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MK813940 (Aeromonas phage 4_L372X, complete genome) position: , mismatch: 5, identity: 0.844

cgacaagcaaggcaaagaatggcccttggaag	CRISPR spacer
acaccagcaaggcaaaaaatggcccttggaaa	Protospacer
  ** ***********.**************.

11. spacer 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to AP013469 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C56-MedDCM-OCT-S38-C52) position: , mismatch: 7, identity: 0.781

ctgaacgtcttcttttaaatcagccatcgcca	CRISPR spacer
cataccatattgttttaaatcagccaccgcca	Protospacer
*  * *.* ** **************.*****

12. spacer 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to AP013470 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C56A-MedDCM-OCT-S32-C59) position: , mismatch: 7, identity: 0.781

ctgaacgtcttcttttaaatcagccatcgcca	CRISPR spacer
cataccatattgttttaaatcagccaccgcca	Protospacer
*  * *.* ** **************.*****

13. spacer 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to AP013751 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C56A-MedDCM-OCT-S46-C59, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

ctgaacgtcttcttttaaatcagccatcgcca	CRISPR spacer
cataccatattgttttaaatcagccaccgcca	Protospacer
*  * *.* ** **************.*****

14. spacer 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP010589 (Phaeobacter gallaeciensis strain P11 plasmid pP11_a, complete sequence) position: , mismatch: 7, identity: 0.781

catttatcagtttctgtgccgcatctgcagct	CRISPR spacer
catgcggcagtttctgagccgcatcagcaggt	Protospacer
*** .. ********* ******** **** *

15. spacer 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP021041 (Phaeobacter gallaeciensis strain P129 plasmid pP129_a, complete sequence) position: , mismatch: 7, identity: 0.781

catttatcagtttctgtgccgcatctgcagct	CRISPR spacer
catgcggcagtttctgagccgcatcagcaggt	Protospacer
*** .. ********* ******** **** *

16. spacer 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP010674 (Phaeobacter gallaeciensis strain P75 plasmid pP75_a, complete sequence) position: , mismatch: 7, identity: 0.781

catttatcagtttctgtgccgcatctgcagct	CRISPR spacer
catgcggcagtttctgagccgcatcagcaggt	Protospacer
*** .. ********* ******** **** *

17. spacer 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NC_023138 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_A255, complete sequence) position: , mismatch: 7, identity: 0.781

catttatcagtttctgtgccgcatctgcagct	CRISPR spacer
catgcggcagtttctgagccgcatcagcaggt	Protospacer
*** .. ********* ******** **** *

18. spacer 1.16|468705|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP010637 (Phaeobacter gallaeciensis strain P73 plasmid pP73_a, complete sequence) position: , mismatch: 7, identity: 0.781

catttatcagtttctgtgccgcatctgcagct	CRISPR spacer
catgcggcagtttctgagccgcatcagcaggt	Protospacer
*** .. ********* ******** **** *

19. spacer 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP033895 (Serratia liquefaciens strain FG3 plasmid p2-125, complete sequence) position: , mismatch: 7, identity: 0.781

gtctggctggcgatagtgctggc--tcatcagcc	CRISPR spacer
gtctggctggggattgtgctggccaccctcgg--	Protospacer
********** *** ********  .* **.*  

20. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

21. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

22. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

23. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

24. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

25. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

26. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to MT601274 (Bacillus phage vB_BsuS-Goe13, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

27. spacer 1.37|470014|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 7, identity: 0.781

tatttctgtatctcgatttgagttgatttctt	CRISPR spacer
aattcataaatctcgatttgaggtgttttctt	Protospacer
 ***. *. ************* ** ******

28. spacer 1.44|469437|32|LR134151|CRT matches to MT498043 (Arthrobacter phage Jinkies, complete genome) position: , mismatch: 7, identity: 0.781

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
gccatgccgtagggcgggtcggtaactagcac	Protospacer
 .** ********************* * *. 

29. spacer 2.8|479921|32|LR134151|PILER-CR matches to NZ_CP018813 (Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cttgcccgcgacgatctcgccgccctgaagcg	Protospacer
 .....************ *************

30. spacer 2.9|479982|32|LR134151|PILER-CR matches to NZ_CP018813 (Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cttgcccgcgacgatctcgccgccctgaagcg	Protospacer
 .....************ *************

31. spacer 2.20|480653|32|LR134151|PILER-CR matches to MH622942 (Microviridae sp. isolate ctcb16, complete genome) position: , mismatch: 7, identity: 0.781

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
gatgttttttctttcgttattcttggttgtgc	Protospacer
 .************* ******.**** * * 

32. spacer 2.20|480653|32|LR134151|PILER-CR matches to NZ_CP009683 (Francisella tularensis subsp. novicida strain AZ06-7470 plasmid pFNE_1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
tttgttttttctttgttttttcctgacatata	Protospacer
* ************ *** ******..* * *

33. spacer 2.32|479912|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP018813 (Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cttgcccgcgacgatctcgccgccctgaagcg	Protospacer
 .....************ *************

34. spacer 2.33|479973|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP018813 (Paraburkholderia sp. SOS3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cttgcccgcgacgatctcgccgccctgaagcg	Protospacer
 .....************ *************

35. spacer 2.44|480644|32|LR134151|CRISPRCasFinder,CRT matches to MH622942 (Microviridae sp. isolate ctcb16, complete genome) position: , mismatch: 7, identity: 0.781

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
gatgttttttctttcgttattcttggttgtgc	Protospacer
 .************* ******.**** * * 

36. spacer 2.44|480644|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP009683 (Francisella tularensis subsp. novicida strain AZ06-7470 plasmid pFNE_1, complete sequence) position: , mismatch: 7, identity: 0.781

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
tttgttttttctttgttttttcctgacatata	Protospacer
* ************ *** ******..* * *

37. spacer 1.5|468034|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_AP018282 (Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome) position: , mismatch: 8, identity: 0.75

gatggtttgaattactgcctgtctgtatgttt	CRISPR spacer
gcttaatcgatttactgcctgtctgtatcttg	Protospacer
* * . *.** ***************** ** 

38. spacer 1.10|468339|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP037908 (Escherichia coli strain LHM10-1 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

ctgaacgtcttcttttaaatcagccatcgcca	CRISPR spacer
ttgaacatcgtcttttaaatcagcgagtgaga	Protospacer
.*****.** ************** * .*  *

39. spacer 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to KC801932 (Escherichia phage Lw1, complete genome) position: , mismatch: 8, identity: 0.75

ttaaatcatgggcaaataaaacccctgtcgca	CRISPR spacer
gcaaatcatgggtaaataaaacccccgacaat	Protospacer
 .**********.************.* *.  

40. spacer 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MT334653 (Buttiauxella phage vB_ButM_GuL6, complete genome) position: , mismatch: 8, identity: 0.75

ttaaatcatgggcaaataaaacccctgtcgca	CRISPR spacer
gtaaagcatgggtaaataaaaccccaggacaa	Protospacer
 **** ******.************ *    *

41. spacer 1.14|468583|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to KM659092 (Ochrobactrum sp. LM19 plasmid pLM19O2, complete sequence) position: , mismatch: 8, identity: 0.75

aggggggggtaatcgtattactggtacatcag	CRISPR spacer
ccgtcgtcgtaattgtattgctggtacatcag	Protospacer
  *  *  *****.*****.************

42. spacer 1.15|468644|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.75

cggaacagcgcattcagcaggccacatctgca	CRISPR spacer
cggaacagcgcatagagcaggccgaagatcaa	Protospacer
*************  ********. *  *  *

43. spacer 1.20|468949|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgttggcattaacgatccacgcgccggagcag	CRISPR spacer
agttctgcgtaacgatcgacgcgccggaacag	Protospacer
 ***     ******** **********.***

44. spacer 1.31|469648|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018865 (Arthrobacter crystallopoietes strain DSM 20117 plasmid pLDW-10, complete sequence) position: , mismatch: 8, identity: 0.75

atcgatacgacggccgcattgtcagtatcgcc	CRISPR spacer
atcgcaacgacggccgcattgtcggcctgccg	Protospacer
****  *****************.*. *  * 

45. spacer 1.44|469437|32|LR134151|CRT matches to MF373843 (Mycobacterium phage StevieRay, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

46. spacer 1.44|469437|32|LR134151|CRT matches to MN010757 (Mycobacterium phage HUHilltop, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

47. spacer 1.44|469437|32|LR134151|CRT matches to MK820639 (Mycobacterium phage Phineas, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

48. spacer 1.44|469437|32|LR134151|CRT matches to MF133446 (Mycobacterium phage Bogie, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

49. spacer 1.44|469437|32|LR134151|CRT matches to MK937604 (Mycobacterium phage Necropolis, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

50. spacer 1.44|469437|32|LR134151|CRT matches to NC_041969 (Mycobacterium phage Jebeks, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

51. spacer 1.44|469437|32|LR134151|CRT matches to NC_026605 (Mycobacterium phage Malithi, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

52. spacer 1.44|469437|32|LR134151|CRT matches to KU985090 (Mycobacterium phage Shipwreck, complete genome) position: , mismatch: 8, identity: 0.75

ctcaggccgtagggcgggtcggtaacaatcga	CRISPR spacer
tccagcccgtagggcgggtcggtcaccacagc	Protospacer
..*** ***************** ** *. * 

53. spacer 2.8|479921|32|LR134151|PILER-CR matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cccgtgcgcgacgatctccccgcccttgcggt	Protospacer
 **.* ******************** . *  

54. spacer 2.8|479921|32|LR134151|PILER-CR matches to MH513984 (Mycobacterium phage Steamy, complete genome) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
agccgcagagacgatcgccgcgccctgaagcg	Protospacer
* *  . * ******* ** ************

55. spacer 2.9|479982|32|LR134151|PILER-CR matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cccgtgcgcgacgatctccccgcccttgcggt	Protospacer
 **.* ******************** . *  

56. spacer 2.9|479982|32|LR134151|PILER-CR matches to MH513984 (Mycobacterium phage Steamy, complete genome) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
agccgcagagacgatcgccgcgccctgaagcg	Protospacer
* *  . * ******* ** ************

57. spacer 2.17|480470|32|LR134151|PILER-CR matches to NZ_CP039967 (Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ctggtg--ctgatcaagatagccgacaacgctaa	CRISPR spacer
--ggcgacctgataaagatagccgccaacgccgc	Protospacer
  **.*  ***** ********** ******.. 

58. spacer 2.20|480653|32|LR134151|PILER-CR matches to MN694783 (Marine virus AFVG_250M759, complete genome) position: , mismatch: 8, identity: 0.75

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
agtgttttttctttatttattgctcggattaa	Protospacer
 ************* ****** ** * *  .*

59. spacer 2.28|479669|31|LR134151|CRISPRCasFinder,CRT matches to MN013086 (Klebsiella phage vB_Kpn_Chronis, complete genome) position: , mismatch: 8, identity: 0.742

atcaccgggatgttgtgtaagtttatgttga	CRISPR spacer
atcaccgggctgttgggtaagttgggggtag	Protospacer
********* ***** ******* . * *..

60. spacer 2.32|479912|32|LR134151|CRISPRCasFinder,CRT matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cccgtgcgcgacgatctccccgcccttgcggt	Protospacer
 **.* ******************** . *  

61. spacer 2.32|479912|32|LR134151|CRISPRCasFinder,CRT matches to MH513984 (Mycobacterium phage Steamy, complete genome) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
agccgcagagacgatcgccgcgccctgaagcg	Protospacer
* *  . * ******* ** ************

62. spacer 2.33|479973|32|LR134151|CRISPRCasFinder,CRT matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cccgtgcgcgacgatctccccgcccttgcggt	Protospacer
 **.* ******************** . *  

63. spacer 2.33|479973|32|LR134151|CRISPRCasFinder,CRT matches to MH513984 (Mycobacterium phage Steamy, complete genome) position: , mismatch: 8, identity: 0.75

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
agccgcagagacgatcgccgcgccctgaagcg	Protospacer
* *  . * ******* ** ************

64. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP039967 (Pseudorhodobacter sp. S12M18 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ctggtg--ctgatcaagatagccgacaacgctaa	CRISPR spacer
--ggcgacctgataaagatagccgccaacgccgc	Protospacer
  **.*  ***** ********** ******.. 

65. spacer 2.44|480644|32|LR134151|CRISPRCasFinder,CRT matches to MN694783 (Marine virus AFVG_250M759, complete genome) position: , mismatch: 8, identity: 0.75

tgtgttttttctttctttattcctggtagaga	CRISPR spacer
agtgttttttctttatttattgctcggattaa	Protospacer
 ************* ****** ** * *  .*

66. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP012498 (Escherichia coli strain 06-00048 plasmid pCFSAN004178P_02, complete sequence) position: , mismatch: 8, identity: 0.758

tgggaaacagggaaaatggttcctgtt--gggtca	CRISPR spacer
gcagaaacagggaaattggatcctgtttctggt--	Protospacer
  .************ *** *******   ***  

67. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP012501 (Escherichia coli strain 08-00022 plasmid pCFSAN004179G, complete sequence) position: , mismatch: 8, identity: 0.758

tgggaaacagggaaaatggttcctgtt--gggtca	CRISPR spacer
gcagaaacagggaaattggatcctgtttctggt--	Protospacer
  .************ *** *******   ***  

68. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP012500 (Escherichia coli strain 09-00049 plasmid pCFSAN004180G, complete sequence) position: , mismatch: 8, identity: 0.758

tgggaaacagggaaaatggttcctgtt--gggtca	CRISPR spacer
gcagaaacagggaaattggatcctgtttctggt--	Protospacer
  .************ *** *******   ***  

69. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP042296 (Escherichia coli strain RM9088 plasmid p1RM9088, complete sequence) position: , mismatch: 8, identity: 0.758

tgggaaacagggaaaatggttcctgtt--gggtca	CRISPR spacer
gcagaaacagggaaattggatcctgtttctggt--	Protospacer
  .************ *** *******   ***  

70. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP012499 (Escherichia coli strain GB089 plasmid pCFSAN004181P, complete sequence) position: , mismatch: 8, identity: 0.758

tgggaaacagggaaaatggttcctgtt--gggtca	CRISPR spacer
gcagaaacagggaaattggatcctgtttctggt--	Protospacer
  .************ *** *******   ***  

71. spacer 1.6|468095|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

cacgcactgcgctcatcagggcaaagcttcta	CRISPR spacer
ccagcagggcgctcatcagggcaaagggttgc	Protospacer
*  ***  ******************  *.  

72. spacer 1.8|468217|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP016084 (Streptomyces sp. SAT1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

aaaattggctacgccggtgcggttgcctcgtc	CRISPR spacer
cgggttggcgacgccggtgcggttgccgctca	Protospacer
 ...***** ***************** * . 

73. spacer 1.11|468400|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MN508622 (UNVERIFIED: Enterobacter phage EC-W2, complete genome) position: , mismatch: 9, identity: 0.719

ttaaatcatgggcaaataaaacccctgtcgca	CRISPR spacer
gcaaatcatgggtaaataaaaccccagataac	Protospacer
 .**********.************ * ..  

74. spacer 1.22|469071|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MN812722 (Vibrio phage NF, complete genome) position: , mismatch: 9, identity: 0.719

ggatttctttccatctactcatcctcctcctc	CRISPR spacer
atggcgcattccatctactcaccctcctgctc	Protospacer
. . . * *************.****** ***

75. spacer 1.22|469071|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to MN694433 (Marine virus AFVG_250M1159, complete genome) position: , mismatch: 9, identity: 0.719

ggatttctttccatctactcatcctcctcctc	CRISPR spacer
gttattttttccatctagtcatcctcctttgg	Protospacer
*   **.********** **********..  

76. spacer 1.25|469254|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP044508 (Chryseobacterium sp. strain SNU WT7 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtcacatagtggcaatctttatcaggttgaa	CRISPR spacer
aggctgatagtggtaatctttatcaagttctc	Protospacer
 * *  *******.***********.***   

77. spacer 1.38|470075|33|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.727

gcgaaccgcaaagcccgtgacctggtgatcgtc	CRISPR spacer
ttcggacgcaaagcccttgccctggtgatcgac	Protospacer
 . .. ********** ** *********** *

78. spacer 2.8|479921|32|LR134151|PILER-CR matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.719

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cacatactcgacgatctccccgccccgcgcag	Protospacer
  *** * *****************.* .  *

79. spacer 2.9|479982|32|LR134151|PILER-CR matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.719

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cacatactcgacgatctccccgccccgcgcag	Protospacer
  *** * *****************.* .  *

80. spacer 2.14|480287|32|LR134151|PILER-CR matches to MG700548 (Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcaggactgcccaccacggcgtttttaca	CRISPR spacer
ttcccaagactgcccaccagggcgttttcgga	Protospacer
 .  **.************ ********.. *

81. spacer 2.17|480470|32|LR134151|PILER-CR matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

82. spacer 2.17|480470|32|LR134151|PILER-CR matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

83. spacer 2.17|480470|32|LR134151|PILER-CR matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

84. spacer 2.17|480470|32|LR134151|PILER-CR matches to NZ_CP022359 (Shewanella bicestrii strain JAB-1 plasmid pSHE-CTX-M, complete sequence) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

85. spacer 2.17|480470|32|LR134151|PILER-CR matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

86. spacer 2.22|480775|32|LR134151|PILER-CR matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 9, identity: 0.719

gcttggttttgggttctggttggctgcgccct	CRISPR spacer
gcttggtttttggttttggttggtggaacgta	Protospacer
********** ****.*******. * .* . 

87. spacer 2.32|479912|32|LR134151|CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.719

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cacatactcgacgatctccccgccccgcgcag	Protospacer
  *** * *****************.* .  *

88. spacer 2.33|479973|32|LR134151|CRISPRCasFinder,CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 9, identity: 0.719

accattcgcgacgatctccccgccctgaagcg	CRISPR spacer
cacatactcgacgatctccccgccccgcgcag	Protospacer
  *** * *****************.* .  *

89. spacer 2.38|480278|32|LR134151|CRISPRCasFinder,CRT matches to MG700548 (Klebsiella pneumoniae strain UR15381 plasmid pUJ-1KPC, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcaggactgcccaccacggcgtttttaca	CRISPR spacer
ttcccaagactgcccaccagggcgttttcgga	Protospacer
 .  **.************ ********.. *

90. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

91. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

92. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

93. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP022359 (Shewanella bicestrii strain JAB-1 plasmid pSHE-CTX-M, complete sequence) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

94. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctgatgctgatcaagatggccgacgcgacggc	Protospacer
***.*************.******.  .* . 

95. spacer 2.46|480766|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP017473 (Enterobacter cloacae strain M12X01451 plasmid pM12X01451, complete sequence) position: , mismatch: 9, identity: 0.719

gcttggttttgggttctggttggctgcgccct	CRISPR spacer
gcttggtttttggttttggttggtggaacgta	Protospacer
********** ****.*******. * .* . 

96. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 9, identity: 0.719

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
ataggcggcactgtatctgctggaagcccgat	Protospacer
*  ****** ****.***********. .*  

97. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 9, identity: 0.719

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
ataggcggcactgtatctgctggaagcccgat	Protospacer
*  ****** ****.***********. .*  

98. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP022280 (Escherichia coli strain STEC299 plasmid pSTEC299_1, complete sequence) position: , mismatch: 9, identity: 0.727

tgggaaacagggaaaatggttcctgttg--ggtca	CRISPR spacer
gccgaaacagggaaactggatcctgttactggc--	Protospacer
   ************ *** *******.  **.  

99. spacer 2.54|481254|33|LR134151|CRISPRCasFinder,CRT matches to NZ_CP024249 (Escherichia coli O182:H21 strain D181 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

tgggaaacagggaaaatggttcctgttg--ggtca	CRISPR spacer
gccgaaacagggaaactggatcctgttactggc--	Protospacer
   ************ *** *******.  **.  

100. spacer 1.3|467912|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 10, identity: 0.688

ttcgagggaatttctggatggagtggcccgga	CRISPR spacer
cgatggcgaatttctggacggagaggcccgat	Protospacer
.   .* ***********.**** ******. 

101. spacer 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 10, identity: 0.688

gtctggctggcgatagtgctggctcatcagcc	CRISPR spacer
gtctggctggggatggtgctggccatttcctt	Protospacer
********** ***.********.  *.  ..

102. spacer 1.17|468766|32|LR134151|PILER-CR,CRISPRCasFinder,CRT,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gtctggctggcgatagtgctggctcatcagcc	CRISPR spacer
atagagctggagatagtgctggcccatcgcgt	Protospacer
.*  .***** ************.****.  .

103. spacer 1.27|469376|32|LR134151|CRISPRCasFinder,CRT,CRT matches to MN480763 (Streptococcus salivarius strain YU10 plasmid pSsal-YU10, complete sequence) position: , mismatch: 10, identity: 0.688

ttaggctgatataattttgttcgataatcggc	CRISPR spacer
aactactgatatcattttgttctataattgag	Protospacer
    .******* ********* *****.*. 

104. spacer 1.29|469526|32|LR134151|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 10, identity: 0.688

ggatgttctgtgatgatgggtgccgggacgac	CRISPR spacer
gccgccagtgtgatgatgcgtgtcgggacgag	Protospacer
*    .  ********** ***.******** 

105. spacer 2.7|479860|32|LR134151|PILER-CR matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cttgcggaattctgggaaaatggaaagctact	CRISPR spacer
cttgaggaaatctgggaaaatggttgggggac	Protospacer
**** **** *************  .*  . .

106. spacer 2.10|480043|32|LR134151|PILER-CR matches to MF766045 (Streptomyces phage Daudau, complete genome) position: , mismatch: 10, identity: 0.688

agacctcgccgatttaactgaagagctcactg	CRISPR spacer
gcgtctcgccgatctcactgaagagcttcttc	Protospacer
. ..*********.* ***********. .* 

107. spacer 2.12|480165|32|LR134151|PILER-CR matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaacgcatggtttcgtctttgtagtagata	CRISPR spacer
cgcatcgcatggtttcgtcgttgcatcccgcg	Protospacer
**** ************** ***.* .  ...

108. spacer 2.12|480165|32|LR134151|PILER-CR matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaacgcatggtttcgtctttgtagtagata	CRISPR spacer
cgcatcgcatggtttcgtcgttgcatcccgcg	Protospacer
**** ************** ***.* .  ...

109. spacer 2.17|480470|32|LR134151|PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctggtgctgatcgagattgccgatgcgggcgt	Protospacer
************.**** *****..  * .. 

110. spacer 2.22|480775|32|LR134151|PILER-CR matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 10, identity: 0.688

gcttggttttgggttctggttggctgcgccct	CRISPR spacer
cgacggttttgggatttggttggctgcccggc	Protospacer
   .********* *.*********** *  .

111. spacer 2.24|480897|32|LR134151|PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.688

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
cccccatttcgcccaggcccgcagcatcccgg	Protospacer
.    ************* *** *****  *.

112. spacer 2.24|480897|32|LR134151|PILER-CR matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
ttcctccttcgcacaggcacgccccatcagcg	Protospacer
*     .***** ********** ****** .

113. spacer 2.31|479851|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cttgcggaattctgggaaaatggaaagctact	CRISPR spacer
cttgaggaaatctgggaaaatggttgggggac	Protospacer
**** **** *************  .*  . .

114. spacer 2.34|480034|32|LR134151|CRISPRCasFinder,CRT matches to MF766045 (Streptomyces phage Daudau, complete genome) position: , mismatch: 10, identity: 0.688

agacctcgccgatttaactgaagagctcactg	CRISPR spacer
gcgtctcgccgatctcactgaagagcttcttc	Protospacer
. ..*********.* ***********. .* 

115. spacer 2.36|480156|32|LR134151|CRISPRCasFinder,CRT matches to NZ_AP022333 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaacgcatggtttcgtctttgtagtagata	CRISPR spacer
cgcatcgcatggtttcgtcgttgcatcccgcg	Protospacer
**** ************** ***.* .  ...

116. spacer 2.36|480156|32|LR134151|CRISPRCasFinder,CRT matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaacgcatggtttcgtctttgtagtagata	CRISPR spacer
cgcatcgcatggtttcgtcgttgcatcccgcg	Protospacer
**** ************** ***.* .  ...

117. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
ctggtgctgatcgagattgccgatgcgggcgt	Protospacer
************.**** *****..  * .. 

118. spacer 2.46|480766|32|LR134151|CRISPRCasFinder,CRT matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 10, identity: 0.688

gcttggttttgggttctggttggctgcgccct	CRISPR spacer
cgacggttttgggatttggttggctgcccggc	Protospacer
   .********* *.*********** *  .

119. spacer 2.48|480888|32|LR134151|CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 10, identity: 0.688

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
cccccatttcgcccaggcccgcagcatcccgg	Protospacer
.    ************* *** *****  *.

120. spacer 2.48|480888|32|LR134151|CRISPRCasFinder,CRT matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
ttcctccttcgcacaggcacgccccatcagcg	Protospacer
*     .***** ********** ****** .

121. spacer 2.52|481132|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aactacgaccgcgccaactacctgcctcagaa	CRISPR spacer
ggcggcgaccgcgccaactggctgcctcttcg	Protospacer
..* .**************. *******   .

122. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to MN508624 (UNVERIFIED: Enterobacter phage EC-F2, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

123. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to MN101223 (Klebsiella phage KOX10, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

124. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to MT157285 (Klebsiella phage P-KP2, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

125. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to KT001919 (Klebsiella phage Miro, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

126. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to KT001918 (Klebsiella phage Matisse, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

127. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to JN882287 (Cronobacter phage vB_CsaM_GAP161, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

128. spacer 2.53|481193|32|LR134151|CRISPRCasFinder,CRT matches to GU295964 (Klebsiella phage KP15, complete genome) position: , mismatch: 10, identity: 0.688

aatggcggccctgtgtctgctggaagtatgta	CRISPR spacer
cagcgcggccctatgtctcctggaagtgaagc	Protospacer
 *  ********.***** ********. .  

129. spacer 2.17|480470|32|LR134151|PILER-CR matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
gcagtgctgatcaaggtggccgacaaactgcg	Protospacer
 ..************.*.********  .  .

130. spacer 2.24|480897|32|LR134151|PILER-CR matches to NZ_CP027023 (Streptomyces sp. WAC00288 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
cacatccttcgcccaggcccgccccatcagcg	Protospacer
.. .  .*********** **** ****** .

131. spacer 2.41|480461|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

ctggtgctgatcaagatagccgacaacgctaa	CRISPR spacer
gcagtgctgatcaaggtggccgacaaactgcg	Protospacer
 ..************.*.********  .  .

132. spacer 2.48|480888|32|LR134151|CRISPRCasFinder,CRT matches to NZ_CP027023 (Streptomyces sp. WAC00288 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

tgggaatttcgcccaggcacgccgcatcagga	CRISPR spacer
cacatccttcgcccaggcccgccccatcagcg	Protospacer
.. .  .*********** **** ****** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4591688 : 4601900 14 Pectobacterium_phage(33.33%) NA NA
DBSCAN-SWA_2 4914192 : 4923033 11 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_3 5056948 : 5072730 22 uncultured_Caudovirales_phage(66.67%) portal,protease,terminase,head,tail,capsid,integrase attL 5055136:5055149|attR 5062222:5062235
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage