CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LS398590	Bordetella pertussis strain VS393 genome assembly, chromosome: I	4 crisprs	csa3,cas3,DinG,DEDDh	0	0	25	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LS398590_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS398590_1

253737-253821

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS398590_1

>merge|LS398590|1|253737-253821|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>LS398590|1|1|253737-253821|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
LS398590.1\|SPR45017.1\|263102_264002_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
LS398590.1\|SPR45009.1\|253831_254773_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
LS398590.1\|SPR45005.1\|249671_251027_-\|poly(A)-polymerase	unknown	unknown	gnl\|CDD\|130997
LS398590.1\|SPR45015.1\|260938_261850_-\|membrane-protein	unknown	unknown	gnl\|CDD\|223751
LS398590.1\|SPR45002.1\|247351_248182_+\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|377179
LS398590.1\|SPR45018.1\|264108_265863_+\|gamma-glutamyltranspeptidase	unknown	unknown	gnl\|CDD\|223482
LS398590.1\|SPR45003.1\|248208_249165_+\|putative-exported-protein	unknown	unknown	gnl\|CDD\|270296
LS398590.1\|SPR45014.1\|259530_260922_+\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
LS398590.1\|SPR45000.1\|243481_244525_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
LS398590.1\|SPR45006.1\|251027_251726_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319796
LS398590.1\|SPR45008.1\|252676_253726_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
LS398590.1\|SPR45012.1\|257526_258771_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
LS398590.1\|SPR44999.1\|242694_243408_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
LS398590.1\|SPR45004.1\|249183_249675_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridinepyrophosphokinase	unknown	unknown	gnl\|CDD\|172582
LS398590.1\|SPR45010.1\|254769_256659_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
LS398590.1\|SPR45011.1\|256745_257384_+\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|182775
LS398590.1\|SPR45013.1\|258842_259379_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223873
LS398590.1\|SPR45001.1\|244695_246798_+\|membrane-protein	unknown	unknown	gnl\|CDD\|129868
LS398590.1\|SPR45007.1\|251722_252424_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236347
LS398590.1\|SPR45016.1\|262054_263038_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295

Protein	Function_ID	Function_description	E-value
LS398590.1\|SPR45017.1\|263102_264002_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
LS398590.1\|SPR45009.1\|253831_254773_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
LS398590.1\|SPR45005.1\|249671_251027_-\|poly(A)-polymerase	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
LS398590.1\|SPR45015.1\|260938_261850_-\|membrane-protein	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	6.18631e-41
LS398590.1\|SPR45002.1\|247351_248182_+\|conserved-hypothetical-protein	gnl\|CDD\|377179	pfam03972, MmgE_PrpD, MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyzes the third step of the 2-methylcitric acid cycle.	4.90811e-48
LS398590.1\|SPR45018.1\|264108_265863_+\|gamma-glutamyltranspeptidase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
LS398590.1\|SPR45003.1\|248208_249165_+\|putative-exported-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
LS398590.1\|SPR45014.1\|259530_260922_+\|fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
LS398590.1\|SPR45000.1\|243481_244525_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
LS398590.1\|SPR45006.1\|251027_251726_-\|hypothetical-protein	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
LS398590.1\|SPR45008.1\|252676_253726_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
LS398590.1\|SPR45012.1\|257526_258771_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
LS398590.1\|SPR44999.1\|242694_243408_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.62547e-43
LS398590.1\|SPR45004.1\|249183_249675_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridinepyrophosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
LS398590.1\|SPR45010.1\|254769_256659_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
LS398590.1\|SPR45011.1\|256745_257384_+\|putative-membrane-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
LS398590.1\|SPR45013.1\|258842_259379_-\|hypothetical-protein	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
LS398590.1\|SPR45001.1\|244695_246798_+\|membrane-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
LS398590.1\|SPR45007.1\|251722_252424_-\|hypothetical-protein	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
LS398590.1\|SPR45016.1\|262054_263038_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158

>LS398590.1|SPR45008.1|252676_253726_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>LS398590.1|SPR45007.1|251722_252424_-|hypothetical-protein
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>LS398590.1|SPR45006.1|251027_251726_-|hypothetical-protein
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>LS398590.1|SPR45005.1|249671_251027_-|poly(A)-polymerase
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>LS398590.1|SPR45004.1|249183_249675_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridinepyrophosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>LS398590.1|SPR45003.1|248208_249165_+|putative-exported-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>LS398590.1|SPR45002.1|247351_248182_+|conserved-hypothetical-protein
MVAALGCAAVQAGGQVETLGTAAKSISVGNAARNGLLSALLAAEGFDGPPQPLEGVRGYLRVAADAPDIAAVSAGLGERWEVLNNTYKPYPCGVVLNPVIDACLALAADPRIAGGGWAAIERIELTGHPLLKQRTDRPGVATGRQSQVSAQHAVAVALVRGRAGLPEFSDEAVADAGLRALGLRLGFRDDASMSVDAVKVRIAFQDGTLLEREVQAAHGSRERPLQDDEIEEKLRELCRHGGARVDADRLIEAVWTLDEAGDAAAVMRLAAEQPAA
>LS398590.1|SPR45001.1|244695_246798_+|membrane-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>LS398590.1|SPR45000.1|243481_244525_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>LS398590.1|SPR44999.1|242694_243408_-|GntR-family-transcriptional-regulator
MTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>LS398590.1|SPR45009.1|253831_254773_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>LS398590.1|SPR45010.1|254769_256659_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>LS398590.1|SPR45011.1|256745_257384_+|putative-membrane-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>LS398590.1|SPR45012.1|257526_258771_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>LS398590.1|SPR45013.1|258842_259379_-|hypothetical-protein
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>LS398590.1|SPR45014.1|259530_260922_+|fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>LS398590.1|SPR45015.1|260938_261850_-|membrane-protein
MSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>LS398590.1|SPR45016.1|262054_263038_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>LS398590.1|SPR45017.1|263102_264002_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>LS398590.1|SPR45018.1|264108_265863_+|gamma-glutamyltranspeptidase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: LS398590_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS398590_2

437279-437372

Orphan

Consensus_repeat	Method
GTGCCTGTCCCCGCCGGGACAGGCAC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of LS398590_2

>merge|LS398590|2|437279-437372|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCACCCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGCGTGCCTGTCCCCGCCGGGACAGGCAC

>LS398590|2|2|437279-437372|CRISPRCasFinder
GTGCCTGTCCCCGCCGGGACAGGCAC	CCGGGCCCAGGAAAACCCCCACGCTGCGCCCGCTGTGCGGGC
GTGCCTGTCCCCGCCGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
LS398590.1\|SPR45184.1\|430295_431609_-\|short-chain-fatty-acids-transporter	unknown	unknown	gnl\|CDD\|224942
LS398590.1\|SPR45192.1\|438461_439838_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224089
LS398590.1\|SPR45182.1\|427566_428772_+\|sodium/glutamate-symport-carrier-protein	unknown	unknown	gnl\|CDD\|129314
LS398590.1\|SPR45193.1\|439842_441654_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
LS398590.1\|SPR45190.1\|437458_437929_-\|putative-universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
LS398590.1\|SPR45185.1\|431799_431979_-\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|377342
LS398590.1\|SPR45194.1\|441650_442169_-\|Mg(2+)-transporter	unknown	unknown	gnl\|CDD\|224204
LS398590.1\|SPR45195.1\|442279_443035_+\|putative-membrane-protein	unknown	unknown	gnl\|CDD\|223930
LS398590.1\|SPR45198.1\|445307_446279_+\|putative-exported-protein	unknown	unknown	gnl\|CDD\|270234
LS398590.1\|SPR45196.1\|443230_444463_+\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
LS398590.1\|SPR45188.1\|435567_436518_+\|transposase-IS481-family	unknown	unknown	gnl\|CDD\|366234
LS398590.1\|SPR45191.1\|438017_438362_-\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|225984
LS398590.1\|SPR45187.1\|433131_435504_-\|AcrB/AcrD/AcrF-family-protein	unknown	unknown	gnl\|CDD\|223911
LS398590.1\|SPR45183.1\|428774_430280_+\|exported-protein	unknown	unknown	gnl\|CDD\|270238
LS398590.1\|SPR45189.1\|436649_437048_-\|GTP-binding-domain-protein	unknown	unknown	gnl\|CDD\|234569
LS398590.1\|SPR45180.1\|425833_426301_+\|GNAT-family	unknown	unknown	gnl\|CDD\|366181
LS398590.1\|SPR45186.1\|432388_433123_-\|DNA-polymerase-III-epsilon-chain	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235574
LS398590.1\|SPR45197.1\|444455_445241_+\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
LS398590.1\|SPR45181.1\|426393_427371_+\|IS481-family	unknown	unknown	gnl\|CDD\|366234
LS398590.1\|SPR45199.1\|446289_447267_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106

Protein	Function_ID	Function_description	E-value
LS398590.1\|SPR45184.1\|430295_431609_-\|short-chain-fatty-acids-transporter	gnl\|CDD\|224942	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism].	6.57351e-166
LS398590.1\|SPR45192.1\|438461_439838_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	4.33957e-108
LS398590.1\|SPR45182.1\|427566_428772_+\|sodium/glutamate-symport-carrier-protein	gnl\|CDD\|129314	TIGR00210, Sodium/glutamate_symport_carrier_protein, sodium--glutamate symport carrier (gltS). [Transport and binding proteins, Amino acids, peptides and amines].	1.2444e-106
LS398590.1\|SPR45193.1\|439842_441654_+\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	0
LS398590.1\|SPR45190.1\|437458_437929_-\|putative-universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
LS398590.1\|SPR45185.1\|431799_431979_-\|putative-membrane-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	0.00323203
LS398590.1\|SPR45194.1\|441650_442169_-\|Mg(2+)-transporter	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
LS398590.1\|SPR45195.1\|442279_443035_+\|putative-membrane-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
LS398590.1\|SPR45198.1\|445307_446279_+\|putative-exported-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
LS398590.1\|SPR45196.1\|443230_444463_+\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
LS398590.1\|SPR45188.1\|435567_436518_+\|transposase-IS481-family	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
LS398590.1\|SPR45191.1\|438017_438362_-\|conserved-hypothetical-protein	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
LS398590.1\|SPR45187.1\|433131_435504_-\|AcrB/AcrD/AcrF-family-protein	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
LS398590.1\|SPR45183.1\|428774_430280_+\|exported-protein	gnl\|CDD\|270238	cd13520, PBP2_TAXI_TRAP, Substrate binding domain of TAXI proteins of the tripartite ATP-independent periplasmic transporters; the type 2 periplasmic binding protein fold. This group includes Thermus thermophilus GluBP (TtGluBP) of TAXI-TRAP family and closely related proteins. TRAP transporters are ubiquitous in prokaryotes, but absent from eukaryotes. They are comprised of an SBP (substrate-binding protein) of the DctP or TAXI families and two unequally sized integral membrane components. Although TtGluBP is predicted to be an L-glutamate and/or an L-glutamine-binding protein, the substrate spectrum of TAXI proteins remains to be defined. A sequence-homology search also shows that TtGluBP shares low sequence homology with putative immunogenic proteins of uncharacterized function. The substrate-binding domain of TAXI proteins belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and tworeceptor cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.84755e-82
LS398590.1\|SPR45189.1\|436649_437048_-\|GTP-binding-domain-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
LS398590.1\|SPR45180.1\|425833_426301_+\|GNAT-family	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.07596e-07
LS398590.1\|SPR45186.1\|432388_433123_-\|DNA-polymerase-III-epsilon-chain	gnl\|CDD\|235574	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional.	2.40573e-142
LS398590.1\|SPR45197.1\|444455_445241_+\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
LS398590.1\|SPR45181.1\|426393_427371_+\|IS481-family	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.0826e-23
LS398590.1\|SPR45199.1\|446289_447267_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60

>LS398590.1|SPR45189.1|436649_437048_-|GTP-binding-domain-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>LS398590.1|SPR45188.1|435567_436518_+|transposase-IS481-family
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>LS398590.1|SPR45187.1|433131_435504_-|AcrB/AcrD/AcrF-family-protein
MNHAYNLLNLHSYPVRLRDVAKVEIGAANDRVLSRYNGRSAINIGLTRQSTANPLELSKAVRAEIVQLNQSLPAGMKLNIAYDSSVFIERSIDSVFKTIGEAIILVVLVIFFFLRNLRASIIPIVTIPVSLVGACALMYLFGFSINTLTLLAMVLAIGLVVDDAIVVLENIFRHIEEGMPRKQAAFQGSREIGFAVVAMTLTLVTVYAPLAFATGRTGRLFIEFALALAGAVLVSGFVALTLTPMMCSVLLRHQYSHNRWYNLIEGWLEALGRGYRRALELALRHRWTVVGVGAVVAAASGVLFSVVKSELAPIEDRGVVFGIVSAPEGATLNYTLDSMLGIEQFYAAIPEAATAQVTVGFPTVTDGTAILRLTPWEERTRRQQQIAQELQPKFASLPGVRAFPTNPPSLGQSARSKPVEFIIMSQASYPELAKLVGVFTNALRDYPGLQNIDTDLRLNTPELRVHVDRDKMADVGASVEVVGRTLESMLGGRQVTRYKDQGEQYDVIVQVVQGDRATPTDISGIYVRARDGSMVQLDNLLSVRESVSPQSLNHFNRLRAVKVDAAVAPGYALGEVLDHMHRVARDVLPNTVITDLDGQSREFRDSSGSIYLVFAMALAFIYLVLAAQFESWRNPFIIMLSVPLSMTGALLALWLTGGTLSIYSQIGLITLVGLITKHGILIVEFANQLRDQGKAMHEAVVEASVLRLRPILMTTGAMVLGTVPLALAQGAGAESRQQIGWVLVGGLMLGTLLTLFVVPVAYSMIAAARPQGQRTGASHTGPAVVPPASE
>LS398590.1|SPR45186.1|432388_433123_-|DNA-polymerase-III-epsilon-chain
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>LS398590.1|SPR45185.1|431799_431979_-|putative-membrane-protein
MHPDTNTMLIIIAAAVALMIVGFGLRDRNLGLGLLGIGLIAALATIAYKAYITFNSFYY
>LS398590.1|SPR45184.1|430295_431609_-|short-chain-fatty-acids-transporter
MFKLMSRSAVKMVERYLPDPYVFVVLLTLVAAGAAMIIEGQTPMAVVRWWGNGFWGLLTFAMQMLLVLVTGYMLASTPLVKRMLARLASLATSAGGAIILVSVVSLAASWINWGFGLVVGALFAKQIARQVRVDYRLLVASAYSGFIIWHGGLAGSIPLTIATEGHFSADKIGIIPTGDTIFAVFNLVIVVAMFILVPLVNRLMLPDEKESVYVDPARLEEASVPASDDDKRPAARLENSRLLAWLIAAGGLAYMFDYYVVRGAGLNLNVINFSFLILAILLHGTPRRLLASLDEAIKGGAGIVIQFPFYAGIMAIMMDSGLAATLSEWFVSIASAATLPFWTFISAGIVNIFIPSGGGQWAVQSPIVISAAQALGADMPRVAMAVAWGDAWTNMLQPFWALPVLAIAGLKAKDIMGYCIIQLLVTGVIISVGLSFF
>LS398590.1|SPR45183.1|428774_430280_+|exported-protein
MFIRWLILSACLLLAACSRAPDTEILQRDVGQTLAATYGPDLFDIVALRRMGSATDSTAPPGQTRRVVYYDVVLGLKKDLTLGAWDQPGAAALVSLLGAGPRSISGVKSSGNAAGDQIVAHASAIYQRDAEQWVHVAPASFTATEAPSLDTGAPPPVTRQLLQTLEQITRSVPYSASSTAQHVVQQELERSVARINGRLARLQKGYPLATGPDKGEYLAFGQALAAIGRNEQVRVIPLITGGSADNMAMLRSGAAVAALSQADIAQLAYEGKGPFESQGPFSGLRALGSLYPELVHIVVRQGDGIATVGALRGKKIALGPSGSAVRTTLETVLAAHGLQPGRDYAVIDTPAAAALPQLSEGRVDAVAQVIGTPAAPLRAALTQARLALLPLDRAAIDKLVQADPTLMALDIPANTYPSQAAAIPTVGMAALLVTTADLTRDEAAHMVDVVYRAGQDLLAAGSAQGAQVSAANAGRGLSIPLHDGAVEAFEKLGAPPLPEGR
>LS398590.1|SPR45182.1|427566_428772_+|sodium/glutamate-symport-carrier-protein
MISLTPVQSLLACCLVLVAGRILTTRIGVLSRYSIPDPIVGGLLFAVLATALDTWGGIQISLETNIKPTLLLIFFGCIGLTADLKLLARGGPRLIAFLLALIPFLVLQNAVGLGLAWLLDMHPLMGLIGGTITLVGGHGTGAAYAARFADINNIQDVMALAMTAATIGLVLGGIIGGPVAEWLIRRHKLDPRMAGKDANQVLPEVETTAEAPTATSFITSLTAVFVTVVVGTYLAGLVEDAPISLPNFLWCLATGAIIRNFGGYVGIRLDDRVSEIIGSISLSLFLGLTMMTLDLSSVVRLAGPLALMLVAQALVCALYAGWAVFRMLKRDYEAAVMAAAFCGFAMGATATAIANMQALTRRHGPAPESFIVVPVTGAFLVDILNVIVLTSLIALPFVGGM
>LS398590.1|SPR45181.1|426393_427371_+|IS481-family
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYMVRADLAG
>LS398590.1|SPR45180.1|425833_426301_+|GNAT-family
MRPADVEAVLRVQAAVYPASLLESAALFQNRIEIAPATCQVALDGQDLIGYLIAYPWDAGLPPALDRSLERLPGAADTWFVHDCAVLPAAQGGGVAAALLAGGRAQARRLGLRRASLVALAQAVGYWLRHGYQPLADSDALRAKLAGYGDGARYM
>LS398590.1|SPR45190.1|437458_437929_-|putative-universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>LS398590.1|SPR45191.1|438017_438362_-|conserved-hypothetical-protein
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>LS398590.1|SPR45192.1|438461_439838_-|GntR-family-transcriptional-regulator
MTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>LS398590.1|SPR45193.1|439842_441654_+|elongation-factor-G
MASACRTGCHPAPEGEEQSETVWRQANKYGVPRIAFVNKMDRVGADFFRVQRQIVERLKGDAVPIQIPVGAEDHFEGVVDLVKMKAIIWDDASQGVRFEYRDIPPELQAQAEQWREKMIEKAAEANEALLEKYLSGQPLSEDEIKSGLRARTVANEIVPMLCGSAFKNKGVQAMLDAVIDYLPSPADVPAIIGHDERDREIERHPADDEPFSALAFKIMTDPFVGQLVFFRVYSGVVKSGDSVLNPLKSRKERLGRILQMHANERREISEVYAGDIAAAVGIKEITTGDTLTDPAHVIILERMTFPEPVISQAVEPRTKADQEKMGIALNRLAQEDPSFRVRTDEESGQTIISGMGELHLEILVDRMKREFGVEANVGKPQVAYRETIRSTVTDVEGKFVKQSGGRGQYGHVVLKLEPQEQGKGYEFVDAIKGGVVPREFIPAVDRGVRETLNTGVLAGYPVVDVKVTLVFGSYHDVDSNENAFRMAASMAFKEGMRRAKPVLLEPMMHVEIETPEDFTGNVMGDLSSRRGMVQGMEDIAGGGGKLVRAEVPLAEMFGYSTSLRSLTQGRATYSMEFKHYAEAPRQVAEQIIAARGSGAAARG
>LS398590.1|SPR45194.1|441650_442169_-|Mg(2+)-transporter
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>LS398590.1|SPR45195.1|442279_443035_+|putative-membrane-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>LS398590.1|SPR45196.1|443230_444463_+|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>LS398590.1|SPR45197.1|444455_445241_+|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>LS398590.1|SPR45198.1|445307_446279_+|putative-exported-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>LS398590.1|SPR45199.1|446289_447267_-|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR

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Crispr_ID: LS398590_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS398590_3

1028191-1028285

Orphan

Consensus_repeat	Method
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS398590_3

>merge|LS398590|3|1028191-1028285|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTTATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAGTAAAAGGGCACCCGCAAGGGTGCCTTTTT

>LS398590|3|3|1028191-1028285|CRISPRCasFinder
TAAAAGGGCACCCGCAAGGGTGTCCTTTT	ATTGCGAAAAGATATCTGGAAGAAAGCCTTTTCAGAG
TAAAAGGGCACCCGCAAGGGTGCCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
LS398590.1\|SPR45727.1\|1031517_1032801_-\|major-facilitator-family-protein	unknown	unknown	gnl\|CDD\|341042
LS398590.1\|SPR45729.1\|1033505_1034237_+\|RNA-pseudouridylate-synthase	unknown	unknown	gnl\|CDD\|224108
LS398590.1\|SPR45719.1\|1023784_1024561_+\|partial	unknown	unknown	gnl\|CDD\|225448
LS398590.1\|SPR45732.1\|1039189_1040572_+\|outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|273830
LS398590.1\|SPR45714.1\|1017620_1018655_+\|sulfate-binding-protein	unknown	unknown	gnl\|CDD\|224529
LS398590.1\|SPR45723.1\|1027743_1028124_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
LS398590.1\|SPR45728.1\|1032873_1033446_-\|conserved-hypothetical-protein	unknown	unknown	gnl\|CDD\|225703
LS398590.1\|SPR45717.1\|1020491_1021556_+\|sulfate/thiosulfate-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
LS398590.1\|SPR45715.1\|1018898_1019570_+\|partial	unknown	unknown	gnl\|CDD\|131194
LS398590.1\|SPR45720.1\|1024749_1026024_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
LS398590.1\|SPR45731.1\|1036013_1039193_+\|acriflavine-resistance-protein-B	unknown	unknown	gnl\|CDD\|273335
LS398590.1\|SPR45724.1\|1028394_1029060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239518
LS398590.1\|SPR45721.1\|1026177_1026558_+\|putative-membrane-protein	unknown	unknown	unknown
LS398590.1\|SPR45718.1\|1021552_1023262_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
LS398590.1\|SPR45730.1\|1034288_1035224_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
LS398590.1\|SPR45726.1\|1030348_1031278_-\|IS110-family	unknown	unknown	gnl\|CDD\|376773
LS398590.1\|SPR45725.1\|1029161_1030211_+\|probable-oxidoreductase	unknown	unknown	gnl\|CDD\|381320
LS398590.1\|SPR45733.1\|1040641_1040893_-\|membrane-protein	unknown	unknown	gnl\|CDD\|225170
LS398590.1\|SPR45722.1\|1026565_1027399_-\|DMT-transporter-permease	unknown	unknown	gnl\|CDD\|274527
LS398590.1\|SPR45716.1\|1019684_1020467_+\|partial	unknown	unknown	gnl\|CDD\|226665

Protein	Function_ID	Function_description	E-value
LS398590.1\|SPR45727.1\|1031517_1032801_-\|major-facilitator-family-protein	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.07713e-14
LS398590.1\|SPR45729.1\|1033505_1034237_+\|RNA-pseudouridylate-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	7.73356e-72
LS398590.1\|SPR45719.1\|1023784_1024561_+\|partial	gnl\|CDD\|225448	COG2895, CysN, GTPases - Sulfate adenylate transferase subunit 1 [Inorganic ion transport and metabolism].	4.14006e-100
LS398590.1\|SPR45714.1\|1017620_1018655_+\|sulfate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
LS398590.1\|SPR45723.1\|1027743_1028124_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	1.34063e-62
LS398590.1\|SPR45728.1\|1032873_1033446_-\|conserved-hypothetical-protein	gnl\|CDD\|225703	COG3161, UbiC, 4-hydroxybenzoate synthetase (chorismate lyase) [Coenzyme metabolism].	1.05194e-17
LS398590.1\|SPR45717.1\|1020491_1021556_+\|sulfate/thiosulfate-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.07125e-165
LS398590.1\|SPR45715.1\|1018898_1019570_+\|partial	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	7.30868e-119
LS398590.1\|SPR45720.1\|1024749_1026024_+\|radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.71758e-24
LS398590.1\|SPR45731.1\|1036013_1039193_+\|acriflavine-resistance-protein-B	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
LS398590.1\|SPR45724.1\|1028394_1029060_+\|hypothetical-protein	gnl\|CDD\|239518	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes. The need of CoAses mainly arises under conditions of oxidative stress. CoAse has a conserved Nudix fold and requires a single divalent cation for catalysis. In addition to a signature Nudix motif G[X5]E[X7]REUXEEXGU, where U is Ile, Leu, or Val, CoAse contains an additional motif upstream called the NuCoA motif (LLTXT(SA)X3RX3GX3FPGG) which is postulated to be involved in CoA recognition. CoA plays a central role in lipid metabolism. It is involved in the initial steps of fatty acid sythesis in the cytosol, in the oxidation of fatty acids and the citric acid cycle in the mitochondria, and in the oxidation of long-chain fatty acids in peroxisomes. CoA has the important role of activating fatty acids for further modification into key biological signalling molecules.	1.59099e-72
LS398590.1\|SPR45732.1\|1039189_1040572_+\|outer-membrane-lipoprotein	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	9.9815e-102
LS398590.1\|SPR45718.1\|1021552_1023262_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
LS398590.1\|SPR45730.1\|1034288_1035224_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.16949e-67
LS398590.1\|SPR45726.1\|1030348_1031278_-\|IS110-family	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	2.98381e-23
LS398590.1\|SPR45725.1\|1029161_1030211_+\|probable-oxidoreductase	gnl\|CDD\|381320	cd19094, AKR_Tas-like, Escherichia coli Tas protein and similar proteins. Escherichia coli Tas protein is the prototype of this family. It is an NADP(H)-dependent aldo-keto reductase that catalyzes the reversible reduction of ketones to the respective alcohols using NADP(H) as a hydride donor.	0
LS398590.1\|SPR45733.1\|1040641_1040893_-\|membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	2.42408e-12
LS398590.1\|SPR45722.1\|1026565_1027399_-\|DMT-transporter-permease	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	1.83398e-24
LS398590.1\|SPR45716.1\|1019684_1020467_+\|partial	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	8.42883e-141

>LS398590.1|SPR45723.1|1027743_1028124_+|50S-ribosomal-protein-L19
MNLIAILEQEEIARLTGGNAVTEFAPGDTVVVSVNVVEGTRKRVQAFEGVVIAKRNRGLNSSFIVRKISSGEAVERTFQLYSPQIAGIEVKRRGDVRRAKLYYLRSRSGKSARIKEKLVLKKAKSA
>LS398590.1|SPR45722.1|1026565_1027399_-|DMT-transporter-permease
MAHAAWNLLAKRAAMVGPMFVFAYGLAATILYAPWVIWVLAHDGMVWSWPVVLCILASSMLHLGYSLCLQRGYQVADLSVVYPIARGTGPLLSTMGAFTLLSEPATTTGIAGMLCVVGGVLLIATQGRLGMFRQAQAWIGVRWGVVIGLFIAAYTVVDAYGVKILLIMPVLFDWFTCATRTLMMTPHVLRRRAQYWPAMRGYWHLAIAVGVLSPLGYILVLYALRNGAPLSLVAPAREMSMMLGTLAGMFLLREKVGIGRLAGCLAILAGVVLLGSS
>LS398590.1|SPR45721.1|1026177_1026558_+|putative-membrane-protein
MTIATTLDAATSLPTAVPGRTLGALRRLARAWAGAAVPQRKWPFPPTPPGQAQPCTPCTDSQPRSVQAVQPAQARALHAQAELSGAATQAATQVLSTKAKIIDVLLVAVWGAMIPALMWLGAAGGF
>LS398590.1|SPR45720.1|1024749_1026024_+|radical-SAM-protein
MASTEHSFSAGFGSPAAAPAALRGRGAVTNVPHRFQQADRVRVDDGWANPDYTAGSDAAALPSVAEALGQGGRRAIPIAVEGADASPNTCAQAPAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHAYLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPIERTWRLTRGMLELLLQTRHPLTVVTKNALVERDLDLLQDLARQKLVTVFVSITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFINDESLEHILQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLHRIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLDLNRHRPELDTHRFVPPLEPGLPPARGRREARAQPGQLALF
>LS398590.1|SPR45719.1|1023784_1024561_+|partial
MVAVNKMDLVDWDRAVFERIGAAYGELARRLALPAFHILPLSALHGDNVVNLSPHSPWYEGQPLLTLLEGLDLAGDGRDLPLRVPVQWVARHGGERADDFRGYAGRVASGVLRPGDEVVVQPSGVRARVQRVLAFDGELQEAVSGDSVTLILDRDVDVSRGDVLAHAQPLNPARRYLLKHGTRLTSAKISAVHTRRDIHELQEVPNADGVLHMNDIGRVSLLTREALATDPYAAIAATGAFILIDEATHQTAAAGMLE
>LS398590.1|SPR45718.1|1021552_1023262_+|sulfate-adenylyltransferase-subunit-2
MMAARPLAAIAGLTAAAAARWHDLQSLLAIIARQYPDAALASSLAAEDMVLTHAIYAGGLDLEVFTLDTGRLHTETLGVLDAVATRYGRAITVYRPDAAAVQAHVDAHGMHAFYESVALRKACCEIRKVEPLRRALAGRGAWITGQRRAQSATRGELPDEERDPVFGLYKFNPLAAWNEADVWSVIRALGIPYNPLHDQGYPSIGCEPCTRAVRPGEDVRAGRWWWESSDSKECGLHAGNRVIQIEARLPEARIATDIDNADRKETPMSAVMTRSHLDWLESEAIFILREVAAECARPALLFSGGKDSVVLLRLAEKAFRPGRFPFPLLHIDTGHNYDEVISFRDARAAELGETLLVRSVEDSIARGSVALRRETDSRNAAQAVTLLEAIEELGLDACIGGARRDEEKARAKERIFSFRDEFGQWDPKAQRPELWNLFNTRVHRGENMWVFPISNWTELDVWQYIQRERLALPSIYYSHTREVVRRKGLLVPVTRLTPPAEGETVEQLAVRFRTVGDISCTCPVASDAADPAAIIAETAVTDITERGATRMDDQTSEASMERRKREGYF
>LS398590.1|SPR45717.1|1020491_1021556_+|sulfate/thiosulfate-transporter-ATP-binding-protein
MSIEVRGLSKRFGAFRALDEVSLHIETGELVALLGPSGCGKTTLLRIIAGLESADAGSVLFAGEDATEVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDELHVASVFVTHDQEEALEVTDRVVLMNAGRIEQVGSPREVWERPATPFVYGFLGDVNQLHGHATRGVWRLGEVALPAPDLPEADNQRAIAYVRPHDIDLARAGTAAPGIPVRLNHVYLAGPSAYLELARQDDQAIIEAQVPEPLFRSLGLKEGEALLAQPRRARVFAVQP
>LS398590.1|SPR45716.1|1019684_1020467_+|partial
MFTEALRKGWQLYLAAIVEPDAWSAIRLTLLVAAIALPVNLVFGVAAAWAVTKFQFRGKQLLITLIDLPFSVSPVVAGMVFVLLFGSQGWFGPWLQDHDWKIVYAVPGVILATLFVTFPFIARELIPLMQAQGSEEEQAALTLGASGWQIFWRVTLPNIKWGLLYGAILCNARAMGEFGAVSVVSGQVRGLTNTMTLHVEILYNEYQFAAAFAVASLLALLALVTLAAKQVVEWRNQRLSPRQAEAPVHAGALAVRPAAA
>LS398590.1|SPR45715.1|1018898_1019570_+|partial
MASYRLTFGASLLAALVNLVFGTIVAWVLVRYRFPGKKIVDVLVDLPFALPTAVAGIALTALYSANGWLGAPLQRWFDLKVAFTPLGIVVALIFIGVPFVVRTVQPVLEDVERELEEAAASLGAGRWQTIRRVLLPALLPALLTGFALAFARAIGEYGSVVFIAGNMPMISEITPLLIISKLEQYDYAGAAAIATVMLALSFALLLVINLLQGWQTRRGGRQP
>LS398590.1|SPR45714.1|1017620_1018655_+|sulfate-binding-protein
MPRNTAGIRGAIVALATVFSLGLPWAVQAQDKQTLLNVSYDPTRELYRAVDEAFIKEYQARAGVDLTVRQSHGGSGRQARSVIDGLDADVVTLALAYDIDAIADRGLLPQDWQKRLPRNSSPYTSTIVFLVRKGNPRQIHDWDDLVKDGVQVITPNPKTSGGARWNYLAAWAYALARNEGSEAKAREFVGQLLSHVPVLDTGARGSTTTFVERGVGDVLLAWENEAFLAREELGPDKFDIVVPSLSILAEPPVAVVDKVVDRKGTRAAAQAYLEYLYTPAAQEIIARNFYRPTDAGVAAKYASRFPKLKLVTIDDPIFGGWRKAQKDHFSDGGTFDQVYQPQRK
>LS398590.1|SPR45724.1|1028394_1029060_+|hypothetical-protein
MAQPWETANQGLARVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPLVMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEETGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFEVPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQTVREALPG
>LS398590.1|SPR45725.1|1029161_1030211_+|probable-oxidoreductase
MKYRKLGHTDLDVSLIGLGTMTWGEQNTEAQAHEQLDYALAHGINLVDAAEMYPVPPKPETQGRTESCIGSWLARTGRRHEVVLASKAAGPVRDAKRPSHIRDGKTFLDRKNLTQALDASLKRLQTDYLDLYQLHWPDRTTNTFGKLAYPWVDDAHTVPIEETLEVLQDFVRAGKVRHVGLSNETPWGVARFLQAAEKHGLPKVATIQNPYNLLNRIFEIGLAEFSHREGVGLLAYSPLAMGILSGKYLDGARPEGSRLALFTRFTRYSNPQAEAAARDYVMLARDHGLAPAQMALAWVNQRPFVSSNLMGATTLAQLKENIESVEVTLSDEVLQGIEAIHARQPNPAP
>LS398590.1|SPR45726.1|1030348_1031278_-|IS110-family
MLTAEADKCKTKVVVNTAAGVQALLAWCAKHGAQPAQLHAILEPTGLYHEQAATALPQVRVSLVNPAQARDFAKALALRSKNDALDSYVLARYGQTLSPALWHPAPLHARQLRALLTRREALSKDLLRELNRKEKSQFSPSAPLVDGSIDKAIAFLREQIKQIERAIDQHIDNHPDLKQDCELLNSIPAIGPQAGNAILAVMHNRHIDSAQSLAAYLGVVPVQRQSGSSLNSCARLSKAGPSQVRATLYMAALVGTRHNPHIRALYQRLLKAGKSKKAALGAAMRKLVHLCFGVLKNRIPYQPNYAMNG
>LS398590.1|SPR45727.1|1031517_1032801_-|major-facilitator-family-protein
MTTTAESPNIRRNTRLLSCAQALGGASPAIVISMGGLVGQMLAGDPGLATLPVSLYNLGLAAGILPAAAMMRRRGRRGGYQLGALLGLLGGLLAAWGIWSGRFALFCTGTALAGLYGAYVQSYRHAVTDGVRPEHRPRAISAIMSAGLVAAVLGTNAAIWTRNLWPAAPFAGSFVSQAALALLALGVVSRLRAVPVGLAAAQAGRPLARIARTPRFIIAAAAGVVSFGLMSLVMTAAPLAMVDCGHSVAAAALGIQWHVLAMYAPSFVTGRLIERFGKLPVTALGLALMLAAAGVSLTGLSVPHFWAVLVLLGVGWNLGFIGATSHAGRLLRAARTPARPGAQRPAGIRLRGRRLVLVRPAAGPWRLVHGQSDGPARRRPAASGLARTQGARLIRRAVAAPGACHRCGKGACPRCGRGALYLSSGGD
>LS398590.1|SPR45728.1|1032873_1033446_-|conserved-hypothetical-protein
MTTPIPLARGWLPAAPSTLDPLRKYWLFRPGALTAGLRQLGHVRLRVLAEYPTGAPRDEADGMRIAAQSPVWVREVLMSIDGVDSVVARSLTPLRASHGVWQGMRRLLTRPLADMLYHDPGIHRSVFVCRRLAAGVPFHATAIARAPAGGPEPALWARRSAFWRAGQPLLVAECFLPAFWSLARAPVAPR
>LS398590.1|SPR45729.1|1033505_1034237_+|RNA-pseudouridylate-synthase
MEKVRISKLMSERGLCSRREADSYIERGWVRVDGVVVSELGARALPDQVITLERAAAARQTARVTILLHKPVGYVSGQAEKGYTPAVALIDARSRYAGDRAPQRFERGQLQGLAVAGRLDIDSQGLLVLTQDGRIAKKLIGEDSEVDKEYLVRVQGRLSEAGLALLNHGLSLDGKPLRPAQVRWQNADQLRFVLREGKKRQIRRMCELVGLRVVGLKRVRIGRVSLGDLPAGQWRYLRADERF
>LS398590.1|SPR45730.1|1034288_1035224_-|LysR-family-transcriptional-regulator
MNRLQGMELFVEVARTLSFGRAAENLAIPKSTLSRQVAELERSVGLRLLSRTTRRVELTEAGQLYFERCQRIVAEARIAHEELQNLVETPSGPLRVNMPADFGTDFLSEAFTEFSRRYPEVTFYLDLASPEHAERVFQTCDVSIEIGDLPDSTHIARLLGVLPAHLYASPDYLARHGEPQHPDDLPRHECIQFRAGTGRVTRWPLNSGERHVEITPGNRFSVNSVSMVRNLATLGAGIAILAPMGNVREDIESGRLKRILPDWLAGPFPVYAVTDTRMLPAKTRIFVEFLMERLSNKTLAGQNNPAFLNLR
>LS398590.1|SPR45731.1|1036013_1039193_+|acriflavine-resistance-protein-B
MAKFFIDRPVFAWVIAIVLMMAGALSILSLPVAQYPNIAPPAISINVTYPGASAQTVQDTVVQVIEQQMNGIDNLQYISSESNSDGSMSITLTFSQGTNPDTAQVQVQNKLAVAQPLLPLEVQQQGIRVTKATKNFLIVAGFVSTDGTMDKSDLADYVASYIQDPISRTPGVGNFQLFGAPYAMRIWISPEKLVNFGLTASDVTTAIREQNVQVSSGQLGGQPAVRGQQLNATVIGPSRLQTPEAFGRILLKVNRDGSQVRLKDVASIELGAQTYAIDSYYNGKPASGLAIKLASGANALDTAQAVRETINGLKPYFPPGMDVVYPYDTTPFVSLSIEGVVKTLFEAVLLVFLVMYLFLQNVRATLIPTLAVPVVLLGTFGVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLSPRQATRKSMGQITGALIGIAMVLAAVFVPMAFFGGSTGVIYRQFSITIVSSMVLSVVVAIVFTPALCATMLKPIPKGHHGSKKGFFGWFNRTFERSSQAYANNVARSMGRTKRLLLIYVVILLGMAWMFMRIPTAFLPDEDQGILFAQVQAPAGATSERTQATIDAAVKYLLEDEKESVASVFAVNGFSFGGRGQNAAILFIKLRDWNERKGAEHRAAAVAARANAKFRAELRDAQAAVFAPPAVMELGNATGFDFQLQDRAGVGHEKLLAARNQLLQEAGASPMLVAVRPNGIEDAPQYQLDIDREKARALGVSITEINNTLATAWGSSYVNDFIDRGRVKKVFVQGEASSRMLPQDLDKWYVRNNAGDMVPFSAFSSAQWTFGPQKLNRYNGVPSYNIQGQAAPGYSSGDAMAEMERLADKLPLGIGYDWTGLSFEERLSGAQAPALYAISLIVVFLCLAALYESWSIPTAVMLVVPLGVVGALLATMTRGLSNDVYFQVGLLTTIGLAAKNAILIVEFAKEHYEEGASLTEAAVHAARQRLRPILMTSLAFILGVVPLAISTGAGSGSQNAIGTGVIGGMLTGTFLAIFFVPLFFVLTLRLFKVKRASENREDDDPHGGAQPATHGGQPQ
>LS398590.1|SPR45732.1|1039189_1040572_+|outer-membrane-lipoprotein
MKPVVMRTLLSLAVATALAGCSLAPTYERPQAPVDAAYPSGPAYGAPGQAAAGAPAAADVGWRDFFGDPLLQELLALSLANNRDLRVAALNVEAARLNPSGQAGISRSYQVGASLSTWELDLFGRIRSLSEQALQLYLAQDETRLATQLTLVAETANAYLTLRADQELLALTRQTLAAQQESYKLTRQSYDLGVATELDLSQAEISLRTAERNLSQYTRMAAQDRNALVLLVGQPLPAGIGAQLDQAVALPDGVVLADLPAGLPSDLLARRPDIRAAEHQLQAANASIGAARAAFFPRISLTGSAGTASASLGGLFDAGSGAWSFAPQISVPIFAGGALRASLDLAKIQKDIGIARYEQAIQSGFREVSDALAGRGTLQEQIRSQELLVQANQRAYDLSQQRYQQGIDNYLSVLDSQRSLYTAQQTLVETRLARLSNLIQLYKALGGGWSERTVAAAQAG
>LS398590.1|SPR45733.1|1040641_1040893_-|membrane-protein
MNIIIMIIVGFVVGLITRAIMPGDQNMGYIMTTILGIIGSVVAGFLGQQLGWYAPGEPAGWIGSVVGAIIVLFVVGLVAKKRA

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Crispr_ID: LS398590_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LS398590_4

3486174-3486283

Orphan

Consensus_repeat	Method
TTGACTGCCAAGACGGTATCTGTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of LS398590_4

>merge|LS398590|4|3486174-3486283|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCCGCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGCTTGACGGCCAAGACGGTATCTGTCCCC

>LS398590|4|4|3486174-3486283|CRISPRCasFinder
TTGACTGCCAAGACGGTATCTGTCCCC	GCAGGGAGGGTGCCTGTCCCCGCCGGGACAGGCACACTGCTGTACGCCATCGACGC
TTGACGGCCAAGACGGTATCTGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
LS398590.1\|SPR47923.1\|3475985_3476501_+\|partial	unknown	unknown	gnl\|CDD\|377224
LS398590.1\|SPR47927.1\|3481029_3481800_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369777
LS398590.1\|SPR47933.1\|3486814_3487495_+\|membrane-protein	unknown	unknown	gnl\|CDD\|377342
LS398590.1\|SPR47925.1\|3479572_3480523_+\|transposase-IS481-family	unknown	unknown	gnl\|CDD\|366234
LS398590.1\|SPR47935.1\|3488566_3489517_-\|transposase-IS481-family	unknown	unknown	gnl\|CDD\|366234
LS398590.1\|SPR47929.1\|3482631_3484041_+\|membrane-bound-lytic-murein-transglycosylase-D	unknown	unknown	gnl\|CDD\|182727
LS398590.1\|SPR47941.1\|3495671_3497435_+\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
LS398590.1\|SPR47934.1\|3487499_3488480_-\|exported-protein	unknown	unknown	gnl\|CDD\|270296
LS398590.1\|SPR47940.1\|3494215_3495556_-\|transmembrane-cytochrome-oxidase	unknown	unknown	gnl\|CDD\|376587
LS398590.1\|SPR47926.1\|3480519_3480987_-\|ribonuclease-H	unknown	unknown	gnl\|CDD\|178927
LS398590.1\|SPR47937.1\|3491021_3491723_+\|transcriptional-regulatory-protein-OmpR	unknown	unknown	gnl\|CDD\|181883
LS398590.1\|SPR47928.1\|3481820_3482621_+\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
LS398590.1\|SPR47939.1\|3493163_3494219_-\|cytochrome-oxidase	unknown	unknown	gnl\|CDD\|376764
LS398590.1\|SPR47924.1\|3476745_3477624_+\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
LS398590.1\|SPR47938.1\|3491722_3493147_+\|two-component-system-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236531
LS398590.1\|SPR47932.1\|3486284_3486677_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
LS398590.1\|SPR47922.1\|3472840_3475819_+\|partial	unknown	unknown	gnl\|CDD\|375438
LS398590.1\|SPR47930.1\|3484135_3484921_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
LS398590.1\|SPR47936.1\|3489598_3490828_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225729
LS398590.1\|SPR47921.1\|3471536_3472487_-\|transposase-IS481-family	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
LS398590.1\|SPR47923.1\|3475985_3476501_+\|partial	gnl\|CDD\|377224	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily. This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.	1.09012e-08
LS398590.1\|SPR47927.1\|3481029_3481800_-\|hypothetical-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
LS398590.1\|SPR47933.1\|3486814_3487495_+\|membrane-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
LS398590.1\|SPR47925.1\|3479572_3480523_+\|transposase-IS481-family	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
LS398590.1\|SPR47935.1\|3488566_3489517_-\|transposase-IS481-family	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.3142e-23
LS398590.1\|SPR47929.1\|3482631_3484041_+\|membrane-bound-lytic-murein-transglycosylase-D	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
LS398590.1\|SPR47941.1\|3495671_3497435_+\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
LS398590.1\|SPR47934.1\|3487499_3488480_-\|exported-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	2.19011e-129
LS398590.1\|SPR47940.1\|3494215_3495556_-\|transmembrane-cytochrome-oxidase	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
LS398590.1\|SPR47926.1\|3480519_3480987_-\|ribonuclease-H	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
LS398590.1\|SPR47937.1\|3491021_3491723_+\|transcriptional-regulatory-protein-OmpR	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
LS398590.1\|SPR47928.1\|3481820_3482621_+\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
LS398590.1\|SPR47939.1\|3493163_3494219_-\|cytochrome-oxidase	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.57809e-49
LS398590.1\|SPR47924.1\|3476745_3477624_+\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
LS398590.1\|SPR47938.1\|3491722_3493147_+\|two-component-system-sensor-histidine-kinase	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
LS398590.1\|SPR47932.1\|3486284_3486677_-\|peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
LS398590.1\|SPR47922.1\|3472840_3475819_+\|partial	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
LS398590.1\|SPR47930.1\|3484135_3484921_+\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
LS398590.1\|SPR47936.1\|3489598_3490828_-\|hypothetical-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	4.88692e-08
LS398590.1\|SPR47921.1\|3471536_3472487_-\|transposase-IS481-family	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23

>LS398590.1|SPR47930.1|3484135_3484921_+|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>LS398590.1|SPR47929.1|3482631_3484041_+|membrane-bound-lytic-murein-transglycosylase-D
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>LS398590.1|SPR47928.1|3481820_3482621_+|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>LS398590.1|SPR47927.1|3481029_3481800_-|hypothetical-protein
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>LS398590.1|SPR47926.1|3480519_3480987_-|ribonuclease-H
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>LS398590.1|SPR47925.1|3479572_3480523_+|transposase-IS481-family
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>LS398590.1|SPR47924.1|3476745_3477624_+|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>LS398590.1|SPR47923.1|3475985_3476501_+|partial
MGQAFAALSVWQVMGYGLVFFGGIYLLFGAATWLLTQRVLPALGVGRPLDPRPLGPGQWRREFLQSGLSVLIFGLGMVFPWGLVQLGWARLDDAAGPWRIVAEILVLVIWNDVHFWINHRLLHTRLLRRFHLPHHRSVVTTPFSTYSFHPIEALMLGNVILLPMVVHDFSF
>LS398590.1|SPR47922.1|3472840_3475819_+|partial
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>LS398590.1|SPR47921.1|3471536_3472487_-|transposase-IS481-family
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>LS398590.1|SPR47932.1|3486284_3486677_-|peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>LS398590.1|SPR47933.1|3486814_3487495_+|membrane-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>LS398590.1|SPR47934.1|3487499_3488480_-|exported-protein
MTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>LS398590.1|SPR47935.1|3488566_3489517_-|transposase-IS481-family
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>LS398590.1|SPR47936.1|3489598_3490828_-|hypothetical-protein
MLACEREHRGVSRVAVAAVLAGNMALAACAMPDPPDISRAPAGLEAGPEPAAIDTTPPETAVPRPAGRAYARAADDVARYGISVLAPASSQPVALAPVLQERAIPEPCRMLPAETGADASVHAAAPALGHDPAVPLPPAGDGADAPASMPLGCEDLFPDVPPAEPNYSFGLETDDLAGKRSVYLMTGVAQPRRPWFSSASAVPTVSYGDRSWVYRPVTGPSLAMGNVVSKAPGWGSTAPIGGVQLSDRLSPGGLLPEGQLGYSSVFGRLNNMDPAATSGAVDYGASAGSGMVRYGLTPSLTLEGQMQSAPSLTTRGVGTTYAAGELGTFQAGATQSTFDAVNAWRYRFGYNVNLADDAVTLGVATEEVGAGFGDLASFQDGGFAHRQMRNTLSAGVPISGWGTLSVKIQ
>LS398590.1|SPR47937.1|3491021_3491723_+|transcriptional-regulatory-protein-OmpR
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>LS398590.1|SPR47938.1|3491722_3493147_+|two-component-system-sensor-histidine-kinase
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>LS398590.1|SPR47939.1|3493163_3494219_-|cytochrome-oxidase
MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGVGLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGGVLGKLFGPLTVMALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADSGYGWFAFFVGLCVMAAYALLGACWLVMRVDGELQRRAAGWARHSIRWTAAGMVAIAVTLGLANAGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVLMLCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKERRPVPLLPPPGA
>LS398590.1|SPR47940.1|3494215_3495556_-|transmembrane-cytochrome-oxidase
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>LS398590.1|SPR47941.1|3495671_3497435_+|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 59497

Natrialba_phage(12.5%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR44777.1\|0_1920_+\|tRNA	tRNA uridine 5-carboxymethylaminomethyl modification protein	NA	NA	NA	NA
SPR44778.1\|1916_2609_+	glucose inhibited division protein B	NA	NA	NA	NA
SPR44779.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
SPR44780.1\|3409_4171_+	GNAT family acetyltransferase	NA	NA	NA	NA
SPR44781.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
SPR44782.1\|5124_5910_+	asparaginase	NA	NA	NA	NA
SPR44783.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
SPR44784.1\|8249_8531_+	preprotein translocase SecE subunit	NA	NA	NA	NA
SPR44785.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
SPR44786.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
SPR44787.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
SPR44788.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
SPR44789.1\|11160_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
SPR44790.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
SPR44791.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
SPR44792.1\|20126_20588_-	lipoprotein	NA	NA	NA	NA
SPR44793.1\|20876_21947_+	membrane protein	NA	NA	NA	NA
SPR44794.1\|22269_24351_-	histidine kinase	NA	NA	NA	NA
SPR44795.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
SPR44796.1\|25685_26201_-	DNA-binding response regulator	NA	NA	NA	NA
SPR44797.1\|26575_27286_+	two component system response regulator	NA	NA	NA	NA
SPR44798.1\|27282_28233_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44799.1\|28674_29103_-	hypothetical protein	NA	NA	NA	NA
SPR44800.1\|29141_30353_-	thiolase	NA	NA	NA	NA
SPR44801.1\|30364_30862_-	MaoC family protein	NA	NA	NA	NA
SPR44802.1\|31069_32005_-	transcriptional regulator	NA	NA	NA	NA
SPR44803.1\|32178_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
SPR44804.1\|33048_34470_+	hypothetical protein	NA	NA	NA	NA
SPR44805.1\|34625_35576_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44806.1\|35674_36625_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44807.1\|36621_37812_-	MFS transporter	NA	NA	NA	NA
SPR44808.1\|37998_38973_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
SPR44809.1\|38974_41113_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
SPR44810.1\|41109_41649_+	D-glycero-beta-D-manno-heptose 17-bisphosphate 7-phosphatase	NA	NA	NA	NA
SPR44811.1\|41652_42381_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SPR44812.1\|42367_43261_+	hypothetical protein	NA	NA	NA	NA
SPR44813.1\|43331_43727_+	lactoylglutathione lyase	NA	NA	NA	NA
SPR44814.1\|43736_44267_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
SPR44815.1\|44712_45663_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44816.1\|46273_46798_+	exported protein	NA	NA	NA	NA
SPR44817.1\|46769_47006_-	transcriptional regulator	NA	NA	NA	NA
SPR44818.1\|47133_48027_+	membrane protein	NA	NA	NA	NA
SPR44819.1\|48030_48480_-	partial	NA	NA	NA	NA
SPR44820.1\|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA
SPR44821.1\|50440_51055_+	hypothetical protein	NA	NA	NA	NA
SPR44822.1\|51190_52141_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44823.1\|52228_53440_+	muropeptide transporter	NA	NA	NA	NA
SPR44824.1\|53551_54277_+	partial	NA	NA	NA	NA
SPR44825.1\|54299_54614_+	outer membrane porin protein precursor	NA	NA	NA	NA
SPR44826.1\|54671_55406_-	aspartate/glutamate racemase	NA	NA	NA	NA
SPR44827.1\|55411_56002_-	glutamate/aspartate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
SPR44828.1\|56026_56716_-	glutamate/aspartate ABC transporter permease	NA	NA	NA	NA
SPR44829.1\|56712_57474_-	glutamate/aspartate ABC transporter permease	NA	NA	NA	NA
SPR44830.1\|57553_58453_-	glutamate/aspartate ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR44831.1\|58546_59497_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_2

70134 : 124171

Planktothrix_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR44841.1\|70134_71085_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44842.1\|71190_71493_+	DUF1153 domain-containing protein	NA	NA	NA	NA
SPR44843.1\|72685_74593_+	chaperone protein HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
SPR44844.1\|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA
SPR44845.1\|75406_75988_-	N-acetylmuramoyl-L-alanine amidase	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
SPR44846.1\|76076_76328_-	exported protein	NA	NA	NA	NA
SPR44847.1\|76329_77172_-	membrane protein	NA	NA	NA	NA
SPR44848.1\|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA
SPR44849.1\|78683_79634_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44850.1\|79762_80653_+\|transposase	transposase IS1002 family	NA	NA	NA	NA
SPR44851.1\|80649_82524_-	lipopolysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
SPR44852.1\|83871_84576_-	DUF2837 domain-containing protein	NA	NA	NA	NA
SPR44853.1\|84572_85631_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
SPR44854.1\|85940_86534_-	sugar transferase	NA	NA	NA	NA
SPR44855.1\|86530_87718_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
SPR44856.1\|87780_89040_-	glycosyl transferase family protein	NA	NA	NA	NA
SPR44857.1\|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
SPR44858.1\|90159_91260_-	lipopolysaccharide biosynthesis protein	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
SPR44859.1\|91263_91839_-	probable acetyltransferase	NA	NA	NA	NA
SPR44860.1\|91842_92895_-	probable oxidoreductase	NA	NA	NA	NA
SPR44861.1\|93025_94033_+	heptosyltransferase	NA	NA	NA	NA
SPR44862.1\|94034_95321_+	3-deoxy-D-manno-octulosonic-acid transferase	NA	NA	NA	NA
SPR44863.1\|95337_95493_-	exported protein	NA	NA	NA	NA
SPR44864.1\|95517_96321_-	pantothenate kinase	NA	NA	NA	NA
SPR44865.1\|96317_97160_-	biotin--protein ligase	NA	NA	NA	NA
SPR44866.1\|97258_98389_+	integral membrane protein	NA	NA	NA	NA
SPR44867.1\|98388_99228_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
SPR44868.1\|99381_99606_-	hypothetical protein	NA	NA	NA	NA
SPR44869.1\|100166_100763_+	exported protein	NA	NA	NA	NA
SPR44870.1\|100792_101446_+	hypothetical protein	NA	NA	NA	NA
SPR44871.1\|101656_102835_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	5.8e-66	40.5
SPR44872.1\|102915_103782_+	cytochrome c550	NA	NA	NA	NA
SPR44873.1\|103857_104133_+	hypothetical protein	NA	NA	NA	NA
SPR44874.1\|104140_104803_+	octanoyltransferase	NA	NA	NA	NA
SPR44875.1\|104864_105866_+	lipoyl synthase	NA	NA	NA	NA
SPR44876.1\|105880_106429_-	dTDP-4-dehydrorhamnose 35-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
SPR44877.1\|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
SPR44878.1\|107379_108441_-	dTDP-glucose 46-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
SPR44879.1\|108476_109427_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44880.1\|109525_110065_-	LysE family translocator	NA	NA	NA	NA
SPR44881.1\|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA
SPR44882.1\|111601_112231_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
SPR44883.1\|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA
SPR44884.1\|112985_114668_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
SPR44885.1\|114955_115303_+	hypothetical protein	NA	NA	NA	NA
SPR44886.1\|115393_115711_+	hypothetical protein	NA	NA	NA	NA
SPR44887.1\|116080_117010_+	IS110 family	NA	NA	NA	NA
SPR44888.1\|117085_117886_-	inner membrane component of binding-protein-dependent transport system	NA	NA	NA	NA
SPR44889.1\|117882_118758_-	inner membrane component of binding-protein-dependent transport system	NA	NA	NA	NA
SPR44890.1\|118768_120061_-	glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR44891.1\|120103_121144_-	sugar ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
SPR44892.1\|121249_122071_-	3'5'-cyclic adenosine monophosphate phosphodiesterase CpdA	NA	NA	NA	NA
SPR44893.1\|122171_123122_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44894.1\|123220_124171_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_3

166990 : 221607

Planktothrix_phage(14.29%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR44931.1\|166990_167941_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44932.1\|168127_169378_+	partial	G9BWD6	Planktothrix_phage	5.1e-20	33.7
SPR44933.1\|169384_170287_-	membrane protein	NA	NA	NA	NA
SPR44934.1\|170264_170894_-	LemA family protein	NA	NA	NA	NA
SPR44935.1\|171176_172607_+	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.8e-44	29.8
SPR44936.1\|172640_173270_+	LysE family efflux protein	NA	NA	NA	NA
SPR44937.1\|173318_174926_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
SPR44938.1\|174962_175634_+	exported protein	NA	NA	NA	NA
SPR44939.1\|175715_176192_-	bacterioferritin	NA	NA	NA	NA
SPR44940.1\|176398_177349_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44941.1\|177345_177819_-	DNA-binding response regulator	NA	NA	NA	NA
SPR44942.1\|178464_178992_+	lipoprotein	NA	NA	NA	NA
SPR44943.1\|179083_179899_+	lipoprotein	NA	NA	NA	NA
SPR44944.1\|179959_180694_+	sulfurtransferase	NA	NA	NA	NA
SPR44945.1\|180731_182810_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
SPR44946.1\|183059_183332_-	exported protein	NA	NA	NA	NA
SPR44947.1\|183433_184519_+	iron sulfur binding protein	NA	NA	NA	NA
SPR44948.1\|184522_186427_+	exported protein	NA	NA	NA	NA
SPR44949.1\|186423_190110_+	exported protein	NA	NA	NA	NA
SPR44950.1\|190170_190734_+	deoxycytidine triphosphate deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
SPR44951.1\|190741_191164_-	conseved hypothetical protein	NA	NA	NA	NA
SPR44952.1\|191191_191611_-	lyase	NA	NA	NA	NA
SPR44953.1\|191639_191987_-	partial	NA	NA	NA	NA
SPR44954.1\|192260_192710_+	hypothetical protein	NA	NA	NA	NA
SPR44955.1\|192864_195135_+	Orn/Arg/Lys decarboxylase	NA	NA	NA	NA
SPR44956.1\|195210_196416_+	exported protein	NA	NA	NA	NA
SPR44957.1\|196514_197465_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44958.1\|197567_198203_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.8e-83	73.8
SPR44959.1\|198199_199093_+	metal transporter	NA	NA	NA	NA
SPR44960.1\|199487_200588_+	glycine cleavage system aminomethyltransferase	NA	NA	NA	NA
SPR44961.1\|200669_201044_+	glycine cleavage system protein H	NA	NA	NA	NA
SPR44962.1\|201103_203968_+	glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
SPR44963.1\|204112_204853_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR44964.1\|204922_206134_+	hypothetical protein	NA	NA	NA	NA
SPR44965.1\|206165_207131_+	exported protein	NA	NA	NA	NA
SPR44966.1\|207148_207646_+	partial	NA	NA	NA	NA
SPR44967.1\|207744_208695_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44968.1\|208781_209732_+\|transposase	transposase for IS1002	NA	NA	NA	NA
SPR44969.1\|209888_210212_+	phosphate starvation-inducible protein	NA	NA	NA	NA
SPR44970.1\|210316_211357_-	hypothetical protein	NA	NA	NA	NA
SPR44971.1\|211362_212142_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
SPR44972.1\|212187_212484_-	conserved hypothetical protein	NA	NA	NA	NA
SPR44973.1\|212509_212785_-	methylmuconolactone isomerase	NA	NA	NA	NA
SPR44974.1\|212841_213486_-	3-oxoadipate CoA-transferase subunit B	NA	NA	NA	NA
SPR44975.1\|213485_214172_-	3-oxoadipate CoA-transferase subunit A	NA	NA	NA	NA
SPR44976.1\|214370_215153_+	transcriptional regulator	NA	NA	NA	NA
SPR44977.1\|215203_215929_-	short-chain dehydrogenase	NA	NA	NA	NA
SPR44978.1\|215960_217310_-	short-chain fatty acids transporter	NA	NA	NA	NA
SPR44979.1\|217421_218354_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
SPR44980.1\|218811_221607_-\|protease	autotransporter subtilisin-like protease	NA	NA	NA	NA

DBSCAN-SWA_4

227599 : 282792

Bacillus_phage(25.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR44985.1\|227599_228550_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44986.1\|228768_229464_+	FadR family transcriptional regulator	NA	NA	NA	NA
SPR44987.1\|229480_230893_+	oxidoreductase	NA	NA	NA	NA
SPR44988.1\|231005_232436_+	aldehyde dehydrogenase	NA	NA	NA	NA
SPR44989.1\|232477_234391_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA
SPR44990.1\|234709_235276_+	exported protein	NA	NA	NA	NA
SPR44991.1\|235417_236368_+	restriction endonuclease	NA	NA	NA	NA
SPR44992.1\|236482_237433_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44993.1\|237519_238470_+\|transposase	transposase for IS1002	NA	NA	NA	NA
SPR44994.1\|238466_239417_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR44995.1\|239515_240313_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
SPR44996.1\|240418_241135_-	MBL fold hydrolase	NA	NA	NA	NA
SPR44997.1\|241262_241673_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
SPR44998.1\|241922_242678_+	partial	D2K0C8	Staphylococcus_phage	4.6e-32	55.0
SPR44999.1\|242694_243408_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR45000.1\|243481_244525_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR45001.1\|244695_246798_+	membrane protein	NA	NA	NA	NA
SPR45002.1\|247351_248182_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45003.1\|248208_249165_+	putative exported protein	NA	NA	NA	NA
SPR45004.1\|249183_249675_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase	NA	NA	NA	NA
SPR45005.1\|249671_251027_-	poly(A) polymerase	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
SPR45006.1\|251027_251726_-	hypothetical protein	NA	NA	NA	NA
SPR45007.1\|251722_252424_-	hypothetical protein	NA	NA	NA	NA
SPR45008.1\|252676_253726_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
SPR45009.1\|253831_254773_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
SPR45010.1\|254769_256659_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
SPR45011.1\|256745_257384_+	putative membrane protein	NA	NA	NA	NA
SPR45012.1\|257526_258771_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
SPR45013.1\|258842_259379_-	hypothetical protein	NA	NA	NA	NA
SPR45014.1\|259530_260922_+	fumarate hydratase	NA	NA	NA	NA
SPR45015.1\|260938_261850_-	membrane protein	NA	NA	NA	NA
SPR45016.1\|262054_263038_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
SPR45017.1\|263102_264002_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45018.1\|264108_265863_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA
SPR45019.1\|265870_266995_-	hypothetical protein	NA	NA	NA	NA
SPR45020.1\|267008_267989_-	exported protein	NA	NA	NA	NA
SPR45021.1\|268719_269670_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45022.1\|270145_270775_+	hypothetical protein	NA	NA	NA	NA
SPR45023.1\|270900_272478_+	cytochrome D ubiquinol oxidase subunit I	NA	NA	NA	NA
SPR45024.1\|272493_273648_+	cytochrome D ubiquinol oxidase subunit II	NA	NA	NA	NA
SPR45025.1\|273661_273787_+	putative exported protein	NA	NA	NA	NA
SPR45026.1\|273783_275535_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.4e-09	23.8
SPR45027.1\|275531_277211_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.6e-16	27.6
SPR45028.1\|277273_277822_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.3e-28	43.1
SPR45029.1\|277932_278721_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45030.1\|278964_279243_+	exported protein	NA	NA	NA	NA
SPR45031.1\|279452_280307_+	outer membrane porin	NA	NA	NA	NA
SPR45032.1\|280286_281237_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45033.1\|281514_281676_+	hypothetical protein	NA	NA	NA	NA
SPR45034.1\|282342_282792_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA

DBSCAN-SWA_5

287953 : 337359

Streptococcus_phage(40.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR45041.1\|287953_289123_+\|protease	protease	W5SAB9	Pithovirus	1.2e-07	31.2
SPR45042.1\|289119_290070_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45043.1\|290168_291122_-	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	5.6e-59	42.5
SPR45044.1\|291426_292236_+	putative IclR-family transcriptional regulator	NA	NA	NA	NA
SPR45045.1\|292336_293689_+	partial	NA	NA	NA	NA
SPR45046.1\|293966_294611_+	Hypothetical protein	NA	NA	NA	NA
SPR45047.1\|294607_295828_+	putative dehydratase/racemase	NA	NA	NA	NA
SPR45048.1\|295850_296846_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
SPR45049.1\|296918_298124_-	CoA transferase	NA	NA	NA	NA
SPR45050.1\|298120_298369_-	glutaredoxin family protein	NA	NA	NA	NA
SPR45051.1\|298365_299250_-	reductase	NA	NA	NA	NA
SPR45052.1\|299419_300370_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45053.1\|300366_300939_-	methylated-DNA--protein-cysteine methyltransferase	M1PFU9	Streptococcus_phage	3.2e-25	42.5
SPR45054.1\|300935_301874_-	tetrapyrrole methylase	NA	NA	NA	NA
SPR45055.1\|302175_302475_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45056.1\|302474_303077_+	probable phosphosugar isomerase	A0A067XQR2	Caulobacter_phage	5.7e-17	34.8
SPR45057.1\|303076_303817_+	phospholipid-binding protein	NA	NA	NA	NA
SPR45058.1\|303813_304305_+	putative thioredoxin	NA	NA	NA	NA
SPR45059.1\|304445_305234_-	exported protein	NA	NA	NA	NA
SPR45060.1\|305495_306398_+	acetylglutamate kinase	NA	NA	NA	NA
SPR45061.1\|306397_307144_+	hydrolase	NA	NA	NA	NA
SPR45062.1\|307193_307769_+	nucleoid occlusion factor SlmA	NA	NA	NA	NA
SPR45063.1\|307981_309475_+	sodium:sulfate symporter	NA	NA	NA	NA
SPR45064.1\|309485_310541_+	L-lactate dehydrogenase	NA	NA	NA	NA
SPR45065.1\|310566_311703_-	rod shape-determining protein	NA	NA	NA	NA
SPR45066.1\|311699_313652_-	penicillin-binding protein 2	NA	NA	NA	NA
SPR45067.1\|313665_314229_-	rod shape-determining protein MreD	NA	NA	NA	NA
SPR45068.1\|314215_315100_-	cell shape-determining protein MreC	NA	NA	NA	NA
SPR45069.1\|315188_316232_-	rod shape-determining protein	NA	NA	NA	NA
SPR45070.1\|316462_316771_+\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit C	NA	NA	NA	NA
SPR45071.1\|316773_318312_+\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit A	NA	NA	NA	NA
SPR45072.1\|318314_319769_+\|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	NA	NA	NA	NA
SPR45073.1\|319882_320557_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
SPR45074.1\|320694_321483_+	endonuclease	M1PSC0	Streptococcus_phage	1.2e-19	25.7
SPR45075.1\|321905_323249_+	glutamate dehydrogenase	NA	NA	NA	NA
SPR45076.1\|323285_323924_-	membrane protein	NA	NA	NA	NA
SPR45077.1\|324111_324891_+	partial	NA	NA	NA	NA
SPR45078.1\|324972_325923_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45079.1\|326021_326972_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45080.1\|326968_327892_-	exported protein	NA	NA	NA	NA
SPR45081.1\|328149_328890_-	extracellular solute-binding protein	NA	NA	NA	NA
SPR45082.1\|329104_330115_-	CDP-6-deoxy-delta-34-glucoseen reductase	NA	NA	NA	NA
SPR45083.1\|330133_330613_-	hypothetical protein	NA	NA	NA	NA
SPR45084.1\|330637_332098_-	aldehyde dehydrogenase	NA	NA	NA	NA
SPR45085.1\|332142_332874_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45086.1\|332993_334502_-	membrane protein	NA	NA	NA	NA
SPR45087.1\|334732_335476_+	putative membrane protein	NA	NA	NA	NA
SPR45088.1\|335574_336297_+	GntR family transcriptional regulator	NA	NA	NA	NA
SPR45089.1\|336408_337359_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_6

360942 : 418582

Paramecium_bursaria_Chlorella_virus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR45117.1\|360942_361893_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45118.1\|362015_362744_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA
SPR45119.1\|362840_364019_+	membrane protein	NA	NA	NA	NA
SPR45120.1\|364015_364849_+	bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA
SPR45121.1\|364885_365626_-	acyltransferase	NA	NA	NA	NA
SPR45122.1\|365745_366921_-	dihydroorotase	NA	NA	NA	NA
SPR45123.1\|366917_367871_-	aspartate carbamoyltransferase	A7RB08	Paramecium_bursaria_Chlorella_virus	2.5e-30	35.8
SPR45124.1\|367884_368286_-	Holliday junction resolvase	NA	NA	NA	NA
SPR45125.1\|368278_368884_-	DUF179 domain-containing protein	NA	NA	NA	NA
SPR45126.1\|369252_370101_+	phosphomethylpyrimidine kinase	NA	NA	NA	NA
SPR45127.1\|370097_370751_+	thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA
SPR45128.1\|370767_372051_+	glutamate-1-semialdehyde 21-aminomutase	NA	NA	NA	NA
SPR45129.1\|372290_373916_+	hypothetical protein	NA	NA	NA	NA
SPR45130.1\|374009_374411_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45131.1\|374435_374870_-	probable 4-hydroxybenzoyl CoA thioesterase	NA	NA	NA	NA
SPR45132.1\|374871_376521_-	acid-coenzyme A ligase	A0A2H4PQU7	Staphylococcus_phage	2.6e-56	31.2
SPR45133.1\|376561_377731_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
SPR45134.1\|377733_378597_-	hydratase/isomerase	NA	NA	NA	NA
SPR45135.1\|378618_379074_-	partial	NA	NA	NA	NA
SPR45136.1\|379408_381220_-	partial	NA	NA	NA	NA
SPR45137.1\|381960_382665_-	high-affinity branched-chain amino acid transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-16	32.2
SPR45138.1\|382658_383453_-	putative branched-chain amino acid transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.6e-09	23.5
SPR45139.1\|383449_384415_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR45140.1\|384418_385339_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR45141.1\|385435_386599_-	putative ABC transporter substrate binding protein	NA	NA	NA	NA
SPR45142.1\|386821_387712_+	esterase	NA	NA	NA	NA
SPR45143.1\|387715_388219_+	MarR-family transcriptional regulator	NA	NA	NA	NA
SPR45144.1\|388261_389260_+	hypothetical protein	NA	NA	NA	NA
SPR45145.1\|389256_390207_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45146.1\|390774_391725_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45147.1\|391784_392345_+	5'(3')-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
SPR45148.1\|392474_393371_+	flagellar protein FlgA	NA	NA	NA	NA
SPR45149.1\|393367_393814_+	flagellar protein FlgA	NA	NA	NA	NA
SPR45150.1\|393847_394729_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45151.1\|394842_396045_+	transporter	NA	NA	NA	NA
SPR45152.1\|396173_398033_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
SPR45153.1\|398110_398920_-	transcriptional regulator	NA	NA	NA	NA
SPR45154.1\|398990_399992_+	2-isopropylmalate synthase	NA	NA	NA	NA
SPR45155.1\|400023_400884_-	AraC family transcriptional regulator	NA	NA	NA	NA
SPR45156.1\|401083_402088_+	acetyl esterase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
SPR45157.1\|402084_403671_+	extracellular solute-binding protein	NA	NA	NA	NA
SPR45158.1\|403679_404606_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
SPR45159.1\|404628_405255_+	putative regulatory protein	NA	NA	NA	NA
SPR45160.1\|405353_406304_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45161.1\|406402_407386_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45162.1\|407312_408014_-	putative exported protein	NA	NA	NA	NA
SPR45163.1\|408062_408833_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
SPR45164.1\|408829_410008_-	CoA transferase	NA	NA	NA	NA
SPR45165.1\|410175_411882_-	thiamine pyrophosphate enzyme	NA	NA	NA	NA
SPR45166.1\|411878_412775_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45167.1\|412815_414417_-	sulfurtransferase	NA	NA	NA	NA
SPR45168.1\|414454_415441_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45169.1\|415515_416115_-	Hypothetical protein	NA	NA	NA	NA
SPR45170.1\|416575_417556_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
SPR45171.1\|417631_418582_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_7

643082 : 766592

123

uncultured_Caudovirales_phage(13.79%)

tRNA,transposase,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR45380.1\|643082_644033_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45381.1\|644131_644932_-	inner membrane protein	NA	NA	NA	NA
SPR45382.1\|644993_645377_+	thioredoxin	NA	NA	NA	NA
SPR45383.1\|645388_646822_-	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
SPR45384.1\|647028_647358_-	putative conserved inner membrane protein	NA	NA	NA	NA
SPR45385.1\|647360_648110_-	inner membrane protein	NA	NA	NA	NA
SPR45386.1\|648292_649213_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SPR45387.1\|649259_649472_+	zinc-finger domain-containing protein	NA	NA	NA	NA
SPR45388.1\|649494_649917_+	hypothetical protein	NA	NA	NA	NA
SPR45389.1\|649933_651034_+	hypothetical protein	NA	NA	NA	NA
SPR45390.1\|651130_652648_-	exported protein	NA	NA	NA	NA
SPR45391.1\|652723_653563_+	putative UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
SPR45392.1\|653584_654457_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA
SPR45393.1\|654547_655642_-	outer membrane porin protein OmpQ	NA	NA	NA	NA
SPR45394.1\|655935_656886_-	IS481 family	NA	NA	NA	NA
SPR45395.1\|657014_657902_+	IS481 family	NA	NA	NA	NA
SPR45396.1\|657985_658345_-	hypothetical protein	NA	NA	NA	NA
SPR45397.1\|658726_659764_-	inner membrane protein	NA	NA	NA	NA
SPR45398.1\|660080_661421_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA
SPR45399.1\|661430_661883_-	inner membrane protein	NA	NA	NA	NA
SPR45400.1\|661979_663161_+	monooxygenase	NA	NA	NA	NA
SPR45401.1\|663226_664252_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45402.1\|664292_664532_+	DNA-binding protein	NA	NA	NA	NA
SPR45403.1\|664601_666191_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
SPR45404.1\|666190_666739_+	Ccrossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
SPR45405.1\|666819_667392_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
SPR45406.1\|667410_668322_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45407.1\|668395_669364_-	serine/threonine dehydratase	NA	NA	NA	NA
SPR45408.1\|669486_670560_+	Holliday junction DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
SPR45409.1\|670564_672385_-	ATP-dependent DNA helicase	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
SPR45410.1\|672461_673412_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45411.1\|673969_674620_+	carbonic anhydrase	NA	NA	NA	NA
SPR45412.1\|674641_676060_-	amidase	NA	NA	NA	NA
SPR45413.1\|676129_676870_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR45414.1\|676883_677612_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR45415.1\|677622_678504_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR45416.1\|678520_679228_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
SPR45417.1\|679230_679989_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
SPR45418.1\|680198_681941_+	sulfite reductase	NA	NA	NA	NA
SPR45419.1\|681933_682458_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45420.1\|682497_683292_-	exported protein	NA	NA	NA	NA
SPR45421.1\|683459_684533_+	hypothetical protein	NA	NA	NA	NA
SPR45422.1\|684631_685582_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45423.1\|685833_686040_-	hypothetical protein	NA	NA	NA	NA
SPR45424.1\|686111_687206_-	phage repressor protein	NA	NA	NA	NA
SPR45425.1\|687515_688214_-	phage-related membrane protein	NA	NA	NA	NA
SPR45426.1\|688467_689418_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45427.1\|690093_690543_+	hypothetical protein	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
SPR45428.1\|690529_691807_+\|terminase	phage terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
SPR45429.1\|691809_693228_+	hypothetical protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
SPR45430.1\|693199_694312_+	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.1e-102	49.7
SPR45431.1\|694317_694560_+	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
SPR45432.1\|694682_695285_+	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
SPR45433.1\|695713_695830_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45434.1\|695854_696664_-	partial	NA	NA	NA	NA
SPR45435.1\|696762_697713_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45436.1\|697814_698378_+	hypothetical protein	R9TJ64	Synechococcus_phage	2.0e-64	70.4
SPR45437.1\|698387_698639_+	hypothetical protein	NA	NA	NA	NA
SPR45438.1\|698701_699184_+	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
SPR45439.1\|699185_699386_+	hypothetical protein	NA	NA	NA	NA
SPR45440.1\|699385_699781_+	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
SPR45441.1\|699777_700176_+	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
SPR45442.1\|700172_700595_+	hypothetical protein	NA	NA	NA	NA
SPR45443.1\|700638_700785_-	hypothetical protein	NA	NA	NA	NA
SPR45444.1\|701534_701876_+	hypothetical protein	A0A1S5R1H0	Pseudomonas_phage	1.2e-08	35.2
SPR45445.1\|701885_702215_+	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
SPR45446.1\|702244_702523_+	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.5e-14	45.2
SPR45447.1\|702548_705161_+\|tail	phage tail protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
SPR45448.1\|705597_706131_+	hypothetical protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
SPR45449.1\|706127_706517_+	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
SPR45450.1\|706509_710466_+	hypothetical protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
SPR45451.1\|710509_710887_+	hypothetical protein	NA	NA	NA	NA
SPR45452.1\|710951_711065_+	hypothetical protein	NA	NA	NA	NA
SPR45453.1\|711368_712181_+	hypothetical protein	NA	NA	NA	NA
SPR45454.1\|712406_712958_+	phage lysozyme	NA	NA	NA	NA
SPR45455.1\|713469_713751_-	hypothetical protein	NA	NA	NA	NA
SPR45456.1\|714300_714972_-	hypothetical protein	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
SPR45457.1\|715327_716014_-	two component system response regulator	NA	NA	NA	NA
SPR45458.1\|715994_716567_-	RNA pyrophosphohydrolase	NA	NA	NA	NA
SPR45459.1\|716632_718363_+\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
SPR45460.1\|718415_718844_+	hypothetical protein	NA	NA	NA	NA
SPR45461.1\|718846_719527_+	protein TolQ	NA	NA	NA	NA
SPR45462.1\|719526_719985_+	protein TolR	NA	NA	NA	NA
SPR45463.1\|720021_720996_+	proline-rich inner membrane protein	NA	NA	NA	NA
SPR45464.1\|721012_722329_+	translocation protein TolB	NA	NA	NA	NA
SPR45465.1\|722360_722858_+	putative peptidoglycan-associated lipoprotein	NA	NA	NA	NA
SPR45466.1\|722944_723634_+	putative periplasmic protein	NA	NA	NA	NA
SPR45467.1\|723633_724683_+	ABC transporter permease	NA	NA	NA	NA
SPR45468.1\|724679_725474_+	putative ABC transport ATP-binding subunit	G9BWD6	Planktothrix_phage	2.4e-15	30.6
SPR45469.1\|727655_728606_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45470.1\|728585_730601_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
SPR45471.1\|730743_731973_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45472.1\|731975_733418_-	pyruvate kinase	NA	NA	NA	NA
SPR45473.1\|733522_734668_+	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
SPR45474.1\|734699_735497_-	rRNA small subunit methyltransferase A	NA	NA	NA	NA
SPR45475.1\|735521_737081_-	chaperone SurA	NA	NA	NA	NA
SPR45476.1\|737077_739444_-	LPS-assembly protein LptD	NA	NA	NA	NA
SPR45477.1\|739559_740663_+	hypothetical protein	NA	NA	NA	NA
SPR45478.1\|740662_741355_+	nucleotidyl transferase	NA	NA	NA	NA
SPR45479.1\|741570_742200_+	putative inner membrane protein	NA	NA	NA	NA
SPR45480.1\|742184_742526_-	putative pterin-4-alpha-carbinolamine dehydratase	NA	NA	NA	NA
SPR45481.1\|742585_743188_-	outer membrane protein	NA	NA	NA	NA
SPR45482.1\|743293_744244_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45483.1\|744403_745276_-	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA
SPR45484.1\|745616_745835_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45485.1\|745874_747254_-	aminotransferase	NA	NA	NA	NA
SPR45486.1\|747295_748693_-	amidase	NA	NA	NA	NA
SPR45487.1\|748732_750385_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-16	30.8
SPR45488.1\|750388_751273_-	ABC transporter permease	NA	NA	NA	NA
SPR45489.1\|751272_752214_-	ABC transporter permease	NA	NA	NA	NA
SPR45490.1\|752292_753912_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR45491.1\|754078_754894_+	transcriptional regulator	NA	NA	NA	NA
SPR45492.1\|754961_755531_-	probable transcriptional regulator	NA	NA	NA	NA
SPR45493.1\|755531_756482_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45494.1\|756801_756996_+	hypothetical protein	NA	NA	NA	NA
SPR45495.1\|757136_758234_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA
SPR45496.1\|758267_759533_+	exported protein	NA	NA	NA	NA
SPR45497.1\|759690_760641_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45498.1\|760884_761475_+	exported protein	NA	NA	NA	NA
SPR45499.1\|761490_763896_-	ferric siderophore receptor	NA	NA	NA	NA
SPR45500.1\|764054_765026_-	membrane protein	NA	NA	NA	NA
SPR45501.1\|765157_765682_+	RNA polymerase sigma factor	NA	NA	NA	NA
SPR45502.1\|765641_766592_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_8

861440 : 985626

107

Bacillus_phage(20.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR45578.1\|861440_862391_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45579.1\|862408_862963_+	TetR family transcriptional regulator	NA	NA	NA	NA
SPR45580.1\|862964_863399_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45581.1\|863395_863830_+	exported protein	NA	NA	NA	NA
SPR45582.1\|863813_864617_-	phosphatase PAP2 family protein	NA	NA	NA	NA
SPR45583.1\|864633_865449_-	DNA repair exonuclease	NA	NA	NA	NA
SPR45584.1\|865445_866261_-	diacylglycerol kinase	NA	NA	NA	NA
SPR45585.1\|866407_867109_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45586.1\|867136_869095_-\|holin	high-affinity choline transport protein	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
SPR45587.1\|869177_870128_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45588.1\|870348_871017_+	transcriptional regulator	NA	NA	NA	NA
SPR45589.1\|871140_872247_+	HlyD family secretion protein	NA	NA	NA	NA
SPR45590.1\|872259_875373_+	multidrug efflux system membrane protein	S5VTK5	Leptospira_phage	4.5e-57	21.5
SPR45591.1\|875369_876863_+	multidrug efflux system outer membrane protein	NA	NA	NA	NA
SPR45592.1\|876877_877549_+	transcriptional regulator	NA	NA	NA	NA
SPR45593.1\|877592_878045_-	azurin	NA	NA	NA	NA
SPR45594.1\|878227_878875_-	transcriptional regulator	NA	NA	NA	NA
SPR45595.1\|878978_881027_+	hydantoin utilization protein A	NA	NA	NA	NA
SPR45596.1\|881023_883036_+	hydantoin utilization protein B	NA	NA	NA	NA
SPR45597.1\|883061_884396_+	hypothetical protein	NA	NA	NA	NA
SPR45598.1\|884504_885497_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
SPR45599.1\|885563_887648_-	hypothetical protein	NA	NA	NA	NA
SPR45600.1\|887672_888644_-	exported protein	NA	NA	NA	NA
SPR45601.1\|888772_889804_-	hypothetical protein	NA	NA	NA	NA
SPR45602.1\|889807_890959_-	cystathionine beta-lyase	NA	NA	NA	NA
SPR45603.1\|891177_892053_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45604.1\|892130_892955_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
SPR45605.1\|893151_894081_-	IS110 family	NA	NA	NA	NA
SPR45606.1\|894364_895348_-	putative exported protein	NA	NA	NA	NA
SPR45607.1\|895406_896534_-	argininosuccinate lyase	NA	NA	NA	NA
SPR45608.1\|896946_898335_-	hypothetical protein	NA	NA	NA	NA
SPR45609.1\|898365_899355_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
SPR45610.1\|899465_900698_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
SPR45611.1\|900979_901780_+	IclR family transcriptional regulator	NA	NA	NA	NA
SPR45612.1\|901802_904034_-\|holin	high-affinity choline transport protein	NA	NA	NA	NA
SPR45613.1\|904821_905268_-	protein translocase subunit SecG	NA	NA	NA	NA
SPR45614.1\|905289_906036_-	triosephosphate isomerase	NA	NA	NA	NA
SPR45615.1\|906179_907157_-	NAD(P)H quinone oxidoreductase	NA	NA	NA	NA
SPR45616.1\|907790_908402_+	hypothetical protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
SPR45617.1\|908395_909613_-	threonine dehydratase catabolic	NA	NA	NA	NA
SPR45618.1\|909753_910704_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45619.1\|910700_911420_-	putative lipoprotein	NA	NA	NA	NA
SPR45620.1\|911540_913700_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
SPR45621.1\|913790_914060_-	30S ribosomal protein S15	NA	NA	NA	NA
SPR45622.1\|914353_914881_+	lipoprotein	NA	NA	NA	NA
SPR45623.1\|914899_915679_-	putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein	NA	NA	NA	NA
SPR45624.1\|915846_916863_-	ketol-acid reductoisomerase	NA	NA	NA	NA
SPR45625.1\|916935_917427_-	acetolactate synthase small subunit	NA	NA	NA	NA
SPR45626.1\|917437_919153_-	acetolactate synthase large subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
SPR45627.1\|920316_921267_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45628.1\|921365_922316_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45629.1\|922312_924145_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
SPR45630.1\|924543_925203_+	thiopurine S-methyltransferase	NA	NA	NA	NA
SPR45631.1\|925296_925443_+	vir-repressed protein	NA	NA	NA	NA
SPR45632.1\|925551_925719_+	putative exported protein	NA	NA	NA	NA
SPR45633.1\|925730_926411_-	lipoprotein	NA	NA	NA	NA
SPR45634.1\|926692_927409_+	hypothetical protein	NA	NA	NA	NA
SPR45635.1\|927423_928725_-	phospholipase	NA	NA	NA	NA
SPR45636.1\|928859_929678_-	partial	NA	NA	NA	NA
SPR45637.1\|930893_933272_+	metal-dependent phosphohydrolase	NA	NA	NA	NA
SPR45638.1\|933989_935342_+	MmgE/PrpD family protein	NA	NA	NA	NA
SPR45639.1\|935370_935892_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
SPR45640.1\|935888_937343_+	carboxylase	NA	NA	NA	NA
SPR45641.1\|937377_937626_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45642.1\|937731_938607_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45643.1\|938632_939688_+	hypothetical protein	NA	NA	NA	NA
SPR45644.1\|939700_940492_+	GntR family transcriptional regulator	NA	NA	NA	NA
SPR45645.1\|940524_941895_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
SPR45646.1\|941910_942990_+	partial	NA	NA	NA	NA
SPR45647.1\|943071_944121_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45648.1\|944117_945068_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45649.1\|945064_945448_-	putative ferredoxin	NA	NA	NA	NA
SPR45650.1\|945502_947317_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.7e-44	27.9
SPR45651.1\|947466_948294_+	oxidoreductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
SPR45652.1\|948339_949320_+	oxidoreductase	NA	NA	NA	NA
SPR45653.1\|949316_949529_-	putative membrane protein	NA	NA	NA	NA
SPR45654.1\|949525_950707_-	membrane protein	NA	NA	NA	NA
SPR45655.1\|950870_951605_+	serine/threonine protein phosphatase 1	A0A2H4J0P0	uncultured_Caudovirales_phage	3.8e-63	49.6
SPR45656.1\|951606_954219_-	penicillin-binding protein 1A	NA	NA	NA	NA
SPR45657.1\|954354_956268_-	putative peptidase	NA	NA	NA	NA
SPR45658.1\|956883_957294_-	hypothetical protein	NA	NA	NA	NA
SPR45659.1\|957391_958477_+	DNA-damage-inducible protein p	NA	NA	NA	NA
SPR45660.1\|958575_959526_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45661.1\|959624_960575_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45662.1\|960554_960650_-	hypothetical protein	NA	NA	NA	NA
SPR45663.1\|960662_961214_-	decarboxylase	NA	NA	NA	NA
SPR45664.1\|962491_963466_+	exported protein	NA	NA	NA	NA
SPR45665.1\|963485_964358_+	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA
SPR45666.1\|964354_965182_+	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA
SPR45667.1\|965205_965610_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.7e-13	35.0
SPR45668.1\|966093_967506_+	hypothetical protein	NA	NA	NA	NA
SPR45669.1\|967610_969065_+	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
SPR45670.1\|969114_970518_-	tricarballylate dehydrogenase	NA	NA	NA	NA
SPR45671.1\|970538_971723_-	citrate utilization protein B	NA	NA	NA	NA
SPR45672.1\|971765_972998_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45673.1\|973111_973927_+	hypothetical protein	NA	NA	NA	NA
SPR45674.1\|973968_974865_+	putative transcriptional regulator	NA	NA	NA	NA
SPR45675.1\|974919_975780_-	fumarylacetoacetate family hydrolase	NA	NA	NA	NA
SPR45676.1\|975857_976931_-	hypothetical protein	NA	NA	NA	NA
SPR45677.1\|977056_978031_-	exported protein	NA	NA	NA	NA
SPR45678.1\|978169_979159_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45679.1\|979183_979759_-	membrane protein	NA	NA	NA	NA
SPR45680.1\|979852_981511_-	CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.3e-20	24.9
SPR45681.1\|981522_982506_-	exported protein	NA	NA	NA	NA
SPR45682.1\|982510_982933_-	hypothetical protein	NA	NA	NA	NA
SPR45683.1\|984179_984539_-	hypothetical protein	NA	NA	NA	NA
SPR45684.1\|984675_985626_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_9

1077071 : 1214866

114

uncultured_Mediterranean_phage(16.67%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR45765.1\|1077071_1078022_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45766.1\|1078120_1079071_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45767.1\|1079369_1080107_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA
SPR45768.1\|1080542_1080866_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA
SPR45769.1\|1080900_1081461_+	flagellar transcriptional activator FlhC	NA	NA	NA	NA
SPR45770.1\|1081581_1082457_+	chemotaxis protein MotA	NA	NA	NA	NA
SPR45771.1\|1082469_1083417_+	chemotaxis protein MotB	NA	NA	NA	NA
SPR45772.1\|1083518_1083812_+	chemotaxis protein CheY	NA	NA	NA	NA
SPR45773.1\|1083838_1085896_+	chemotaxis protein CheA	NA	NA	NA	NA
SPR45774.1\|1085910_1086411_+	chemotaxis protein CheW	NA	NA	NA	NA
SPR45775.1\|1086484_1088191_+	methyl-accepting chemotaxis protein I	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
SPR45776.1\|1088199_1088763_+	chemotaxis protein methyltransferase	NA	NA	NA	NA
SPR45777.1\|1089054_1090107_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
SPR45778.1\|1090159_1090549_+	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
SPR45779.1\|1090557_1091190_+	protein phosphatase CheZ	NA	NA	NA	NA
SPR45780.1\|1091289_1092219_-	IS110 family	NA	NA	NA	NA
SPR45781.1\|1093094_1094144_+	aldo/keto reductase	NA	NA	NA	NA
SPR45782.1\|1094140_1095784_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA
SPR45783.1\|1095780_1096668_-	magnesium and cobalt efflux protein	NA	NA	NA	NA
SPR45784.1\|1096808_1097282_-	endoribonuclease YbeY	NA	NA	NA	NA
SPR45785.1\|1097271_1098294_-	PhoH-like protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
SPR45786.1\|1098290_1099718_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
SPR45787.1\|1099874_1100288_+	partial	NA	NA	NA	NA
SPR45788.1\|1100655_1101585_-	IS110 family	NA	NA	NA	NA
SPR45789.1\|1102004_1102940_-	protein-export membrane protein	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
SPR45790.1\|1102989_1104870_-	protein translocase subunit SecD	NA	NA	NA	NA
SPR45791.1\|1104936_1105281_-	putative secreted protein	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
SPR45792.1\|1105425_1106562_-\|tRNA	queuine tRNA-ribosyltransferase	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
SPR45793.1\|1106558_1107602_-\|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
SPR45794.1\|1107789_1109226_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
SPR45795.1\|1109316_1109958_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
SPR45796.1\|1110380_1111310_+	IS110 family	NA	NA	NA	NA
SPR45797.1\|1111642_1114375_+	pertactin autotransporter	NA	NA	NA	NA
SPR45798.1\|1114441_1115923_-	siroheme synthase	NA	NA	NA	NA
SPR45799.1\|1116126_1116843_+	membrane protein	NA	NA	NA	NA
SPR45800.1\|1116927_1117245_+	putative membrane protein	NA	NA	NA	NA
SPR45801.1\|1117285_1117699_+	putative membrane protein	NA	NA	NA	NA
SPR45802.1\|1117700_1118060_+	hypothetical protein	NA	NA	NA	NA
SPR45803.1\|1118102_1119647_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA
SPR45804.1\|1119730_1120561_+	transglycosylase	NA	NA	NA	NA
SPR45805.1\|1120595_1121750_-	aminotransferase	NA	NA	NA	NA
SPR45806.1\|1122781_1125070_+	NADP-dependent malic enzyme	NA	NA	NA	NA
SPR45807.1\|1126276_1126741_+	conserved hypothetical protein	NA	NA	NA	NA
SPR45808.1\|1126767_1127718_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45809.1\|1127816_1128767_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45810.1\|1129134_1129911_-	phosphate transporter ATP-binding protein PstB	G9BWD6	Planktothrix_phage	4.3e-17	28.7
SPR45811.1\|1129955_1130813_-	phosphate transport system permease protein	NA	NA	NA	NA
SPR45812.1\|1130834_1131851_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA
SPR45813.1\|1131985_1133026_-	phosphate-binding periplasmic protein precursor	M4QHS4	Cyanophage	2.1e-51	40.2
SPR45814.1\|1133220_1135302_-	polyphosphate kinase	NA	NA	NA	NA
SPR45815.1\|1135537_1137031_+	exopolyphosphatase	NA	NA	NA	NA
SPR45816.1\|1137149_1137260_-	hypothetical protein	NA	NA	NA	NA
SPR45817.1\|1137261_1138056_-	conserved hypothetical protein	NA	NA	NA	NA
SPR45818.1\|1138276_1139635_-	phosphoglucosamine mutase	NA	NA	NA	NA
SPR45819.1\|1139631_1140474_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
SPR45820.1\|1140492_1142379_-\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
SPR45821.1\|1142616_1143249_-	rRNA large subunit methyltransferase E	NA	NA	NA	NA
SPR45822.1\|1143267_1143870_+	hypothetical protein	NA	NA	NA	NA
SPR45823.1\|1144021_1144972_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45824.1\|1145142_1145553_+	partial	NA	NA	NA	NA
SPR45825.1\|1145774_1146575_-	membrane protein	NA	NA	NA	NA
SPR45826.1\|1146618_1147605_-	homoserine kinase	NA	NA	NA	NA
SPR45827.1\|1147780_1148758_+\|tRNA	tRNA-dihydrouridine synthase A	NA	NA	NA	NA
SPR45828.1\|1148754_1149705_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45829.1\|1149691_1150750_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45830.1\|1150862_1151321_-	CBS domain-containing protein	NA	NA	NA	NA
SPR45831.1\|1151357_1152671_-	membrane protein	NA	NA	NA	NA
SPR45832.1\|1152688_1153060_+	membrane protein	NA	NA	NA	NA
SPR45833.1\|1153056_1154520_+	hypothetical protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
SPR45834.1\|1154660_1155389_+	two component system response regulator	NA	NA	NA	NA
SPR45835.1\|1155370_1158220_-	two component system sensor histidine kinase	NA	NA	NA	NA
SPR45836.1\|1158432_1159383_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45837.1\|1159550_1160375_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
SPR45838.1\|1160374_1161253_+	high-affinity branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR45839.1\|1161504_1161666_-	hypothetical protein	NA	NA	NA	NA
SPR45840.1\|1161942_1162101_-	hypothetical protein	NA	NA	NA	NA
SPR45841.1\|1162157_1163273_+	amino acids binding protein	NA	NA	NA	NA
SPR45842.1\|1163280_1164096_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
SPR45843.1\|1164092_1165958_+	long-chain fatty-acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
SPR45844.1\|1166036_1166669_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
SPR45845.1\|1166665_1166968_-	membrane protein	NA	NA	NA	NA
SPR45846.1\|1167010_1168531_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
SPR45847.1\|1168537_1169293_-	probable short chain dehydrogenase	NA	NA	NA	NA
SPR45848.1\|1169322_1170204_-	peptide chain release factor 2	NA	NA	NA	NA
SPR45849.1\|1170529_1172266_-	single-stranded-DNA-specific exonuclease	A7KV88	Bacillus_phage	1.3e-50	28.3
SPR45850.1\|1172211_1173153_-	exported protein	NA	NA	NA	NA
SPR45851.1\|1173198_1174479_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA
SPR45852.1\|1174471_1175167_+	lipoprotein releasing system ATP-binding protein	G9BWD6	Planktothrix_phage	7.0e-35	38.6
SPR45853.1\|1175200_1176028_+	putative deoxyribonuclease	NA	NA	NA	NA
SPR45854.1\|1176309_1179540_+\|protease	serine protease	NA	NA	NA	NA
SPR45855.1\|1180275_1184202_+	outer membrane ligand binding protein	NA	NA	NA	NA
SPR45856.1\|1184395_1186009_+	partial	NA	NA	NA	NA
SPR45857.1\|1186101_1187898_+\|transposase	IS481 transposase phused to partial competence protein	NA	NA	NA	NA
SPR45858.1\|1187939_1188866_+	hydrolase	NA	NA	NA	NA
SPR45859.1\|1188935_1189781_+	hypothetical protein	NA	NA	NA	NA
SPR45860.1\|1189848_1190403_+	transcription elongation factor	NA	NA	NA	NA
SPR45861.1\|1190449_1191400_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45862.1\|1191498_1192122_-	serotype 2 fimbrial subunit	NA	NA	NA	NA
SPR45863.1\|1192299_1194582_-	NADP-dependent malic enzyme	NA	NA	NA	NA
SPR45864.1\|1194736_1197433_-	pyruvate dehydrogenase subunit E1	NA	NA	NA	NA
SPR45865.1\|1197558_1198047_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
SPR45866.1\|1198082_1199945_+	membrane protein	NA	NA	NA	NA
SPR45867.1\|1199923_1200133_+	oligopeptide transporter OPT family	NA	NA	NA	NA
SPR45868.1\|1200457_1203328_+	2-oxoglutarate dehydrogenase subunit E1	NA	NA	NA	NA
SPR45869.1\|1203373_1204588_+	2-oxoglutarate dehydrogenase complex subunit dihydrolipoamide succinyltransferase	NA	NA	NA	NA
SPR45870.1\|1204817_1206245_+	2-oxoglutarate dehydrogenase complex subunit dihydrolipoamide dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
SPR45871.1\|1206342_1207434_+	hypothetical protein	NA	NA	NA	NA
SPR45872.1\|1207446_1208205_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
SPR45873.1\|1208292_1209195_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR45874.1\|1209191_1210142_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR45875.1\|1210271_1211255_-	exported protein	NA	NA	NA	NA
SPR45876.1\|1211309_1212032_-	probable short-chain dehydrogenase	NA	NA	NA	NA
SPR45877.1\|1212499_1213366_+	partial	NA	NA	NA	NA
SPR45878.1\|1213510_1214866_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_10

1350512 : 1418999

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46003.1\|1350512_1351463_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46004.1\|1351564_1352221_+	EamA/RhaT family transporter	NA	NA	NA	NA
SPR46005.1\|1352231_1352870_-	glutathione S-transferase	NA	NA	NA	NA
SPR46006.1\|1353233_1353842_-	partial	NA	NA	NA	NA
SPR46007.1\|1353849_1354206_+	partial	NA	NA	NA	NA
SPR46008.1\|1354287_1354989_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-17	30.4
SPR46009.1\|1354989_1355757_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-14	26.4
SPR46010.1\|1355753_1356992_-	leucine/isoleucine/valine ABC transporter permease	NA	NA	NA	NA
SPR46011.1\|1356991_1357918_-	high-affinity branched-chain amino acid transport system permease protein	NA	NA	NA	NA
SPR46012.1\|1358020_1359136_-	leucine/isoleucine/valine ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46013.1\|1359151_1360102_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46014.1\|1360455_1361037_-	membrane protein	A0A2I7SAW6	Vibrio_phage	9.4e-17	37.3
SPR46015.1\|1361033_1361867_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
SPR46016.1\|1362077_1363391_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
SPR46017.1\|1363567_1364449_+	sn-glycerol-3-phosphate transport system permease protein	NA	NA	NA	NA
SPR46018.1\|1364468_1365320_+	sn-glycerol-3-phosphate transport system permease protein	NA	NA	NA	NA
SPR46019.1\|1365372_1366461_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	2.2e-19	31.2
SPR46020.1\|1366571_1367699_-	leu/Ile/val-binding protein	NA	NA	NA	NA
SPR46021.1\|1367819_1368545_+	conserved hypothetical protein	NA	NA	NA	NA
SPR46022.1\|1368643_1369594_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46023.1\|1369815_1370193_-	putative membrane protein	NA	NA	NA	NA
SPR46024.1\|1370340_1370838_+	conserved hypothetical protein	NA	NA	NA	NA
SPR46025.1\|1370834_1371362_+	hypothetical protein	NA	NA	NA	NA
SPR46026.1\|1371495_1372311_+	putative exported protein	NA	NA	NA	NA
SPR46027.1\|1372323_1373505_-	L-lactate dehydrogenase	NA	NA	NA	NA
SPR46028.1\|1373552_1374446_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
SPR46029.1\|1374572_1375043_-	hypothetical protein	NA	NA	NA	NA
SPR46030.1\|1375168_1375996_-	lipoprotein	NA	NA	NA	NA
SPR46031.1\|1376024_1376801_-	putative lipoate-protein ligase A	NA	NA	NA	NA
SPR46032.1\|1376797_1377073_-	conserved hypothetical protein	NA	NA	NA	NA
SPR46033.1\|1377087_1377552_-	acetyltransferase	NA	NA	NA	NA
SPR46034.1\|1377563_1378265_-	glutathione transferase	NA	NA	NA	NA
SPR46035.1\|1378374_1378875_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	4.7e-25	38.4
SPR46036.1\|1378957_1381588_-	hypothetical protein	NA	NA	NA	NA
SPR46037.1\|1381763_1382099_+	tetratricopeptide repeat protein	NA	NA	NA	NA
SPR46038.1\|1382286_1383735_+	CoA-transferase	NA	NA	NA	NA
SPR46039.1\|1383792_1384137_+	putative arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-31	58.4
SPR46040.1\|1384243_1384783_-	peroxiredoxin	NA	NA	NA	NA
SPR46041.1\|1384875_1385826_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46042.1\|1387177_1387582_-	membrane protein	NA	NA	NA	NA
SPR46043.1\|1388818_1389142_+	hypothetical protein	NA	NA	NA	NA
SPR46044.1\|1389144_1390032_-	putative exported protein	NA	NA	NA	NA
SPR46045.1\|1390064_1390490_-	universal stress family protein	NA	NA	NA	NA
SPR46046.1\|1390561_1390915_-	partial	NA	NA	NA	NA
SPR46047.1\|1391154_1391661_-	putative membrane protein	NA	NA	NA	NA
SPR46048.1\|1391699_1393031_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR46049.1\|1393090_1393906_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
SPR46050.1\|1393902_1394757_+	pyridoxine kinase	NA	NA	NA	NA
SPR46051.1\|1394857_1396777_+	ATPase	NA	NA	NA	NA
SPR46052.1\|1401729_1403484_-	alpha amylase	NA	NA	NA	NA
SPR46053.1\|1403480_1405601_-	glycosyl hydrolase	NA	NA	NA	NA
SPR46054.1\|1405605_1407801_-	14-alpha-glucan-branching protein	NA	NA	NA	NA
SPR46055.1\|1407797_1411139_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA
SPR46056.1\|1413941_1414892_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46057.1\|1414957_1415137_-	hypothetical protein	NA	NA	NA	NA
SPR46058.1\|1415253_1416009_-	conserved hypothetical protein	NA	NA	NA	NA
SPR46059.1\|1415995_1417141_-	hypothetical protein	NA	NA	NA	NA
SPR46060.1\|1417194_1418031_-	lysylphosphatidylglycerol synthetase family protein	NA	NA	NA	NA
SPR46061.1\|1418048_1418999_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_11

1479490 : 1535044

Streptococcus_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46114.1\|1479490_1480441_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46115.1\|1480539_1480974_-	putative MerR-family transcriptional regulator	NA	NA	NA	NA
SPR46116.1\|1481056_1483393_+	membrane transport ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
SPR46117.1\|1483671_1484601_+	IS110 family	NA	NA	NA	NA
SPR46118.1\|1484791_1485382_-	TetR family transcriptional regulator	NA	NA	NA	NA
SPR46119.1\|1485472_1485778_-	exported protein	NA	NA	NA	NA
SPR46120.1\|1486245_1487253_+	biotin synthase	NA	NA	NA	NA
SPR46121.1\|1487249_1488125_+	exported protein	NA	NA	NA	NA
SPR46122.1\|1488199_1489666_-	putative membrane transport protein	NA	NA	NA	NA
SPR46123.1\|1489677_1490181_-	peroxiredoxin	M1I839	Pelagibacter_phage	1.8e-24	44.1
SPR46124.1\|1490427_1490859_+	lipoprotein	NA	NA	NA	NA
SPR46125.1\|1490868_1491753_-	hydrolase	NA	NA	NA	NA
SPR46126.1\|1491770_1495232_-	exported protein	NA	NA	NA	NA
SPR46127.1\|1495367_1495853_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
SPR46128.1\|1495833_1496085_+	MoaD/ThiS family protein	NA	NA	NA	NA
SPR46129.1\|1496090_1496573_+	molybdopterin converting factor	NA	NA	NA	NA
SPR46130.1\|1496569_1497091_+	molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
SPR46131.1\|1497097_1498303_+	molybdopterin cofactor biosynthesis protein	NA	NA	NA	NA
SPR46132.1\|1498447_1499545_-	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
SPR46133.1\|1499555_1500662_-	molybdenum-binding protein	NA	NA	NA	NA
SPR46134.1\|1500796_1501747_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46135.1\|1501849_1502434_+	hypothetical protein	NA	NA	NA	NA
SPR46136.1\|1502503_1503925_-	argininosuccinate lyase	NA	NA	NA	NA
SPR46137.1\|1504032_1505379_+	putative membrane transport protein	NA	NA	NA	NA
SPR46138.1\|1505417_1507052_+	NAD synthetase	A0A2L0UZF5	Agrobacterium_phage	8.3e-87	36.6
SPR46139.1\|1507095_1507434_+	nitrogen regulatory protein	NA	NA	NA	NA
SPR46140.1\|1507560_1508511_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46141.1\|1508507_1508882_-	endonuclease	F4YXR7	Roseobacter_phage	2.1e-25	54.4
SPR46142.1\|1508996_1509341_+	partial	NA	NA	NA	NA
SPR46143.1\|1509457_1510915_+	DUF839 domain-containing protein	NA	NA	NA	NA
SPR46144.1\|1511994_1512876_-	LysR-family transcriptional regulator	NA	NA	NA	NA
SPR46145.1\|1512983_1514612_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA
SPR46146.1\|1514653_1516171_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46147.1\|1516265_1517210_+	ABC transporter permease	NA	NA	NA	NA
SPR46148.1\|1517206_1518094_+	ABC transporter permease	NA	NA	NA	NA
SPR46149.1\|1518391_1519294_-	putative ATP/GTP-binding protein	NA	NA	NA	NA
SPR46150.1\|1519290_1520556_-	peptidase M48	NA	NA	NA	NA
SPR46151.1\|1520600_1521146_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	2.1e-26	37.7
SPR46152.1\|1521179_1521866_+	NAD(P)H-hydrate epimerase	NA	NA	NA	NA
SPR46153.1\|1521837_1522767_-	phenylacetic acid degradation operon negative regulatory protein	NA	NA	NA	NA
SPR46154.1\|1522938_1523928_+	12-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
SPR46155.1\|1523992_1524277_+	phenylacetate-CoA oxygenase subunit PaaB	NA	NA	NA	NA
SPR46156.1\|1524292_1525057_+	phenylacetic acid degradation protein	NA	NA	NA	NA
SPR46157.1\|1525053_1525560_+	phenylacetic acid degradation protein	NA	NA	NA	NA
SPR46158.1\|1525571_1526735_+	PaaK subunit	V5UTY8	Synechococcus_phage	5.9e-10	46.7
SPR46159.1\|1526721_1527672_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46160.1\|1527759_1529412_+	oxidoreductase	NA	NA	NA	NA
SPR46161.1\|1529422_1530211_+	2-(12-epoxy-12-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
SPR46162.1\|1530210_1530681_+	phenylacetic acid degradation protein	NA	NA	NA	NA
SPR46163.1\|1530755_1532069_+	phenylacetate-coenzyme A ligase	NA	NA	NA	NA
SPR46164.1\|1532122_1532728_-	fimbrial protein	NA	NA	NA	NA
SPR46165.1\|1532954_1533905_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46166.1\|1534093_1535044_+\|transposase	transposase for IS1002	NA	NA	NA	NA

DBSCAN-SWA_12

1586919 : 1644129

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46206.1\|1586919_1587870_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46207.1\|1588563_1589202_+	partial	NA	NA	NA	NA
SPR46208.1\|1590006_1591620_+	autotransporter	NA	NA	NA	NA
SPR46209.1\|1591616_1592216_-	hypothetical protein	NA	NA	NA	NA
SPR46210.1\|1592450_1593911_+	inosine-5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
SPR46211.1\|1594007_1595600_+	GMP synthase	A0A1V0SH76	Hokovirus	1.0e-17	33.3
SPR46212.1\|1596212_1597553_+	HipA-like protein	NA	NA	NA	NA
SPR46213.1\|1597648_1598275_-	TetR family transcriptional regulator	NA	NA	NA	NA
SPR46214.1\|1598362_1599781_+	membrane efflux protein	NA	NA	NA	NA
SPR46215.1\|1600012_1600618_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
SPR46216.1\|1601505_1602327_+	transcriptional regulator	NA	NA	NA	NA
SPR46217.1\|1602337_1603909_+	hypothetical protein	NA	NA	NA	NA
SPR46218.1\|1603937_1604915_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46219.1\|1604941_1605745_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
SPR46220.1\|1605741_1606536_+	ABC transporter permease	NA	NA	NA	NA
SPR46221.1\|1606543_1607779_+	hypothetical protein	NA	NA	NA	NA
SPR46222.1\|1607756_1609418_-	transcriptional regulator	NA	NA	NA	NA
SPR46223.1\|1609478_1611206_-	solute transport protein	NA	NA	NA	NA
SPR46224.1\|1611317_1612676_+	hypothetical protein	NA	NA	NA	NA
SPR46225.1\|1612968_1613919_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46226.1\|1613959_1615030_+	FUSC family protein	NA	NA	NA	NA
SPR46227.1\|1616102_1617074_+	AraC family transcriptional regulator	NA	NA	NA	NA
SPR46228.1\|1617263_1618214_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46229.1\|1618285_1619128_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR46230.1\|1619289_1619970_+	hypothetical protein	NA	NA	NA	NA
SPR46231.1\|1619963_1621133_+	hypothetical protein	NA	NA	NA	NA
SPR46232.1\|1621129_1622161_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
SPR46233.1\|1622228_1623446_+	membrane protein	NA	NA	NA	NA
SPR46234.1\|1623480_1625013_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR46235.1\|1625093_1625717_+	hypothetical protein	NA	NA	NA	NA
SPR46236.1\|1625747_1626359_+	membrane transport protein	NA	NA	NA	NA
SPR46237.1\|1626394_1626865_+	hypothetical protein	NA	NA	NA	NA
SPR46238.1\|1627232_1628300_+	partial	NA	NA	NA	NA
SPR46239.1\|1628339_1629851_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46240.1\|1629854_1630814_+	ABC transporter permease	NA	NA	NA	NA
SPR46241.1\|1630791_1631646_+	ABC transporter permease	NA	NA	NA	NA
SPR46242.1\|1631647_1633282_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
SPR46243.1\|1633365_1634427_+	LacI family transcriptional regulator	NA	NA	NA	NA
SPR46244.1\|1634625_1634895_+	hypothetical protein	NA	NA	NA	NA
SPR46245.1\|1634898_1635423_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
SPR46246.1\|1635431_1635821_-	MerR family transcriptional regulator	NA	NA	NA	NA
SPR46247.1\|1635838_1636789_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46248.1\|1636785_1637820_-	integral membrane protein	NA	NA	NA	NA
SPR46249.1\|1637928_1638567_+	DedA family integral membrane protein	NA	NA	NA	NA
SPR46250.1\|1639211_1639925_+	hypothetical protein	NA	NA	NA	NA
SPR46251.1\|1640169_1641120_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46252.1\|1641259_1641505_+	hypothetical protein	NA	NA	NA	NA
SPR46253.1\|1641619_1643068_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR46254.1\|1643178_1644129_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_13

2027264 : 2068078

Klosneuvirus(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46612.1\|2027264_2028215_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46613.1\|2028313_2029264_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46614.1\|2029362_2031963_-	inner membrane protein	NA	NA	NA	NA
SPR46615.1\|2032069_2033074_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46616.1\|2033182_2034523_-	aminotransferase	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
SPR46617.1\|2034563_2035592_-	SIS family regulator	NA	NA	NA	NA
SPR46618.1\|2035787_2036333_+	MarR family transcriptional regulator	NA	NA	NA	NA
SPR46619.1\|2036329_2036890_+	L-24-diaminobutyric acid acetyltransferase	NA	NA	NA	NA
SPR46620.1\|2036988_2037939_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46621.1\|2037962_2038427_-\|tRNA	aspartyl-tRNA amidotransferase subunit B	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
SPR46622.1\|2038573_2039782_+	nitric oxide dioxygenase	NA	NA	NA	NA
SPR46623.1\|2039825_2040263_+	DNA-binding protein	NA	NA	NA	NA
SPR46624.1\|2040381_2041671_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
SPR46625.1\|2041736_2042453_-	error-prone DNA polymerase	NA	NA	NA	NA
SPR46626.1\|2042495_2044277_-	error-prone DNA polymerase	A0A2H4P750	Pseudomonas_phage	4.6e-54	30.0
SPR46627.1\|2044411_2045362_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46628.1\|2045460_2046477_-	hypothetical protein	NA	NA	NA	NA
SPR46629.1\|2046655_2047690_+	exported protein	NA	NA	NA	NA
SPR46630.1\|2047686_2048313_+	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
SPR46631.1\|2048309_2049362_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
SPR46632.1\|2049411_2050182_+	hypothetical protein	NA	NA	NA	NA
SPR46633.1\|2050232_2051069_+	exported protein	NA	NA	NA	NA
SPR46634.1\|2051264_2052005_+	transcriptional regulator	NA	NA	NA	NA
SPR46635.1\|2052079_2052823_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46636.1\|2052819_2053215_+	amino acid ABC transporter permease	NA	NA	NA	NA
SPR46637.1\|2053484_2054258_+	glutamine transport ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
SPR46638.1\|2054459_2055203_+	formimidoylglutamase	NA	NA	NA	NA
SPR46639.1\|2055395_2056685_+	glutamate dehydrogenase	NA	NA	NA	NA
SPR46640.1\|2056626_2058246_-	aldehyde dehydrogenase	NA	NA	NA	NA
SPR46641.1\|2058295_2059543_-	N-carbamoyl-L-amino acid amidohydrolase	NA	NA	NA	NA
SPR46642.1\|2059552_2061262_-	acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
SPR46643.1\|2061258_2062197_-	citrate lyase subunit beta	NA	NA	NA	NA
SPR46644.1\|2062193_2063477_-	membrane protein	NA	NA	NA	NA
SPR46645.1\|2063480_2063963_-	membrane protein	NA	NA	NA	NA
SPR46646.1\|2063963_2064950_-	exported protein	NA	NA	NA	NA
SPR46647.1\|2065122_2065842_-	GntR-family transcriptional regulator	NA	NA	NA	NA
SPR46648.1\|2065958_2066909_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46649.1\|2066895_2067396_-	hypothetical protein	NA	NA	NA	NA
SPR46650.1\|2067625_2068078_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_14

2278212 : 2342566

uncultured_Caudovirales_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46823.1\|2278212_2279163_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46824.1\|2279416_2281222_+	sulfate transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.2e-19	27.5
SPR46825.1\|2281335_2281503_-	50S ribosomal protein L33	NA	NA	NA	NA
SPR46826.1\|2281566_2281803_-	50S ribosomal protein L28	NA	NA	NA	NA
SPR46827.1\|2282171_2283344_-	transmembrane transport protein	NA	NA	NA	NA
SPR46828.1\|2283530_2284805_+	cyclopropane-fatty-acyl-phospholipid synthase	NA	NA	NA	NA
SPR46829.1\|2284886_2285837_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46830.1\|2285935_2286886_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46831.1\|2287337_2288339_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46832.1\|2288511_2289369_+	ABC transporter permease	NA	NA	NA	NA
SPR46833.1\|2289365_2290628_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
SPR46834.1\|2290728_2291103_+	tautomerase	NA	NA	NA	NA
SPR46835.1\|2291175_2292363_+	beta-ketothiolase	NA	NA	NA	NA
SPR46836.1\|2292375_2293218_+	spermidine synthase	NA	NA	NA	NA
SPR46837.1\|2293331_2294096_+	GntR family transcriptional regulator	NA	NA	NA	NA
SPR46838.1\|2294046_2295348_+	malonyl-CoA decarboxylase	NA	NA	NA	NA
SPR46839.1\|2295356_2296151_+	hypothetical protein	NA	NA	NA	NA
SPR46840.1\|2296753_2297698_+	malonyl-CoA synthase	A0A2H4PQM9	Staphylococcus_phage	1.6e-18	28.4
SPR46841.1\|2297895_2298867_+	exported protein	NA	NA	NA	NA
SPR46842.1\|2299023_2299536_+	superoxide dismutase	Q9MC02	Salmonella_phage	1.8e-43	52.3
SPR46843.1\|2299694_2300669_+	exported protein	NA	NA	NA	NA
SPR46844.1\|2300915_2301668_+	ABC transporter permease	NA	NA	NA	NA
SPR46845.1\|2301669_2302464_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
SPR46846.1\|2302489_2303296_-	molybdenum-binding protein	NA	NA	NA	NA
SPR46847.1\|2303406_2303997_+	lipoprotein	NA	NA	NA	NA
SPR46848.1\|2304007_2305186_+	hypothetical protein	NA	NA	NA	NA
SPR46849.1\|2305288_2305663_+	DNA-binding protein	NA	NA	NA	NA
SPR46850.1\|2305915_2307232_+	efflux system inner membrane protein	NA	NA	NA	NA
SPR46851.1\|2307298_2310529_+	efflux system transmembrane protein	NA	NA	NA	NA
SPR46852.1\|2312019_2312766_+	pyridoxal phosphate biosynthetic protein	NA	NA	NA	NA
SPR46853.1\|2312850_2313312_+	holo-ACP synthase	NA	NA	NA	NA
SPR46854.1\|2313349_2314408_+	beta-hexosaminidase	NA	NA	NA	NA
SPR46855.1\|2314370_2316200_+	excinuclease ABC subunit C	NA	NA	NA	NA
SPR46856.1\|2316239_2316812_+	putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
SPR46857.1\|2316975_2317950_+	MFS transporter	NA	NA	NA	NA
SPR46858.1\|2318236_2319058_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	4.1e-42	37.6
SPR46859.1\|2319376_2320699_+	isocitrate lyase	NA	NA	NA	NA
SPR46860.1\|2321070_2321694_+	membrane protein	NA	NA	NA	NA
SPR46861.1\|2321653_2322604_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46862.1\|2322685_2323471_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
SPR46863.1\|2323474_2324347_-	ABC transporter permease	NA	NA	NA	NA
SPR46864.1\|2324424_2325564_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR46865.1\|2325922_2327179_+	dioxygenase hydroxylase large subunit	NA	NA	NA	NA
SPR46866.1\|2327184_2327712_+	hypothetical protein	NA	NA	NA	NA
SPR46867.1\|2327722_2328535_+	enoyl-CoA hydratase/isomerase-like protein	NA	NA	NA	NA
SPR46868.1\|2328534_2329257_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
SPR46869.1\|2329278_2329593_+	ferredoxin	NA	NA	NA	NA
SPR46870.1\|2329610_2330759_+	fatty-acyl-CoA racemase	NA	NA	NA	NA
SPR46871.1\|2330789_2331665_-	esterase	NA	NA	NA	NA
SPR46872.1\|2331661_2332981_-	acyl-CoA ligase	NA	NA	NA	NA
SPR46873.1\|2333053_2334250_-	thiolase	NA	NA	NA	NA
SPR46874.1\|2334260_2335631_-	hypothetical protein	NA	NA	NA	NA
SPR46875.1\|2335988_2337812_-	DUF3604 domain-containing protein	NA	NA	NA	NA
SPR46876.1\|2338435_2339242_+	putative lysR-family transcriptional regulator	NA	NA	NA	NA
SPR46877.1\|2339379_2340345_+	exported protein	NA	NA	NA	NA
SPR46878.1\|2340443_2341394_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46879.1\|2341615_2342566_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_15

2431781 : 2498228

Klosneuvirus(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR46973.1\|2431781_2433077_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
SPR46974.1\|2433126_2434398_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
SPR46975.1\|2434428_2434935_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
SPR46976.1\|2434931_2436080_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
SPR46977.1\|2436107_2436533_-	nucleoside diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
SPR46978.1\|2436855_2439738_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
SPR46979.1\|2439830_2440586_-	outer membrane (scaffolding) protein	NA	NA	NA	NA
SPR46980.1\|2441351_2442701_+	two component system sensor histidine kinase	NA	NA	NA	NA
SPR46981.1\|2442799_2443750_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46982.1\|2443848_2444799_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46983.1\|2444872_2445346_+	hypothetical protein	NA	NA	NA	NA
SPR46984.1\|2445371_2446580_+	class-V aminotransferase	NA	NA	NA	NA
SPR46985.1\|2446576_2447350_-\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SPR46986.1\|2447349_2447973_-	ribosome maturation factor	NA	NA	NA	NA
SPR46987.1\|2448138_2448399_-	30S ribosomal protein S16	NA	NA	NA	NA
SPR46988.1\|2448702_2449284_+	exported protein	NA	NA	NA	NA
SPR46989.1\|2449280_2450231_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR46990.1\|2450399_2450654_-	conserved hypothetical protein	NA	NA	NA	NA
SPR46991.1\|2450640_2453265_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
SPR46992.1\|2453336_2454155_-	exported protein	NA	NA	NA	NA
SPR46993.1\|2454151_2454757_-	fimbrial protein	NA	NA	NA	NA
SPR46994.1\|2454794_2457647_-	type II/IV secretion system domain protein	NA	NA	NA	NA
SPR46995.1\|2457643_2458141_-	hypothetical protein	NA	NA	NA	NA
SPR46996.1\|2458115_2459390_-	hypothetical protein	NA	NA	NA	NA
SPR46997.1\|2459393_2460971_-	lipoprotein	NA	NA	NA	NA
SPR46998.1\|2461118_2461700_-	type IV secretion system protein PtlF domain protein	NA	NA	NA	NA
SPR46999.1\|2461877_2463233_-	amidase	NA	NA	NA	NA
SPR47000.1\|2463229_2464864_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
SPR47001.1\|2464856_2465687_-	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA
SPR47002.1\|2465704_2466649_-	ABC transporter permease	NA	NA	NA	NA
SPR47003.1\|2466701_2468276_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47004.1\|2468323_2468683_-	hypothetical protein	NA	NA	NA	NA
SPR47005.1\|2470146_2471103_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47006.1\|2471252_2472590_-	glycerol-3-phosphate-binding periplasmic protein precursor	NA	NA	NA	NA
SPR47007.1\|2472594_2473851_-	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
SPR47008.1\|2474046_2475093_-	CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehy drase reductase	NA	NA	NA	NA
SPR47009.1\|2475150_2475519_-	aspartate 1-decarboxylase	NA	NA	NA	NA
SPR47010.1\|2475649_2476522_-	hypothetical protein	NA	NA	NA	NA
SPR47011.1\|2476598_2477501_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR47012.1\|2477505_2478561_-	pyridoxal phosphate biosynthetic protein	NA	NA	NA	NA
SPR47013.1\|2478557_2479775_-	hypothetical protein	NA	NA	NA	NA
SPR47014.1\|2480509_2480770_+	hypothetical protein	NA	NA	NA	NA
SPR47015.1\|2481048_2481999_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47016.1\|2482199_2483009_+	enoyl-CoA hydratase	NA	NA	NA	NA
SPR47017.1\|2483133_2484084_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47018.1\|2484080_2484974_-	hypothetical protein	NA	NA	NA	NA
SPR47019.1\|2485098_2485293_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47020.1\|2485292_2485634_-	ferredoxin 2Fe-2S	NA	NA	NA	NA
SPR47021.1\|2485643_2487506_-	chaperone protein HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.0e-101	42.4
SPR47022.1\|2487635_2488148_-	co-chaperone protein HscB	NA	NA	NA	NA
SPR47023.1\|2488150_2488474_-	[Fe-S] cluster formation/repair protein	A0A2H4N7N5	Lake_Baikal_phage	6.8e-25	52.8
SPR47024.1\|2488475_2488886_-	[Fe-S] cluster formation/repair protein	A0A218MKD1	uncultured_virus	7.5e-53	79.0
SPR47025.1\|2488923_2490135_-	cysteine desulfurase	NA	NA	NA	NA
SPR47026.1\|2490152_2490665_-	putative DNA-binding protein	NA	NA	NA	NA
SPR47027.1\|2490880_2491372_-	low molecular weight protein-tyrosine-phosphatase	NA	NA	NA	NA
SPR47028.1\|2491624_2493661_-	excinuclease ABC subunit B	NA	NA	NA	NA
SPR47029.1\|2493738_2494941_+	aromatic amino acid aminotransferase	NA	NA	NA	NA
SPR47030.1\|2495069_2495720_+	LexA repressor	A0A2H4JG58	uncultured_Caudovirales_phage	3.3e-10	50.7
SPR47031.1\|2495946_2497023_-	autotransporter	NA	NA	NA	NA
SPR47032.1\|2497277_2498228_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_16

2510536 : 2563147

Lake_Baikal_phage(16.67%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47046.1\|2510536_2512990_-\|protease	Lon protease	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
SPR47047.1\|2513178_2514483_-\|protease	ATP-dependent Clp protease ATP-binding protein	G3M9Z9	Bacillus_virus	3.2e-129	53.8
SPR47048.1\|2514587_2515241_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
SPR47049.1\|2515243_2516554_-	trigger factor	NA	NA	NA	NA
SPR47050.1\|2516750_2517311_+	hypothetical protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
SPR47051.1\|2517422_2517623_-	cold shock-like protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
SPR47052.1\|2517968_2518535_-	DUF924 domain-containing protein	NA	NA	NA	NA
SPR47053.1\|2518618_2518822_-	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
SPR47054.1\|2519128_2519449_-	hypothetical protein	NA	NA	NA	NA
SPR47055.1\|2519490_2519772_-	putative membrane protein	NA	NA	NA	NA
SPR47056.1\|2519846_2521103_-	autotransporter	NA	NA	NA	NA
SPR47057.1\|2521485_2521815_+	exported protein	NA	NA	NA	NA
SPR47058.1\|2522637_2523360_+	N-succinyl-LL-diaminopimelate aminotransferase	NA	NA	NA	NA
SPR47059.1\|2523385_2524207_+	2345-tetrahydropyridine-26-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
SPR47060.1\|2524206_2525346_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
SPR47061.1\|2525352_2526249_+	50S ribosomal protein L3 glutamine methyltransferase	NA	NA	NA	NA
SPR47062.1\|2526263_2528171_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
SPR47063.1\|2528530_2531143_+	exported protein	NA	NA	NA	NA
SPR47064.1\|2531195_2533496_-	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
SPR47065.1\|2533492_2534701_-	fatty acid desaturase	NA	NA	NA	NA
SPR47066.1\|2534962_2535337_+	exported protein	NA	NA	NA	NA
SPR47067.1\|2535333_2536284_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47068.1\|2536382_2537333_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47069.1\|2537431_2539426_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
SPR47070.1\|2539485_2540451_+	bifunctional riboflavin kinase/FMN adenylyltransferase	NA	NA	NA	NA
SPR47071.1\|2540440_2543302_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
SPR47072.1\|2543304_2543811_+	lipoprotein signal peptidase	NA	NA	NA	NA
SPR47073.1\|2543915_2545124_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
SPR47074.1\|2545125_2546064_-	membrane protein	NA	NA	NA	NA
SPR47075.1\|2546225_2546699_+	AsnC family transcriptional regulator	NA	NA	NA	NA
SPR47076.1\|2546695_2547646_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47077.1\|2547744_2548695_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47078.1\|2548805_2549246_-	hypothetical protein	NA	NA	NA	NA
SPR47079.1\|2549374_2550604_-	peptidoglycan-binding protein	NA	NA	NA	NA
SPR47080.1\|2550642_2551533_-	exported protein	NA	NA	NA	NA
SPR47081.1\|2551538_2552669_+	hypothetical protein	NA	NA	NA	NA
SPR47082.1\|2552760_2553249_-	hypothetical protein	NA	NA	NA	NA
SPR47083.1\|2553245_2555018_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.7e-57	32.4
SPR47084.1\|2555319_2555535_-	putative ABC transporter	NA	NA	NA	NA
SPR47085.1\|2555799_2558349_+	cyanophycin synthetase	NA	NA	NA	NA
SPR47086.1\|2558419_2560993_+	cyanophycin synthetase	NA	NA	NA	NA
SPR47087.1\|2561258_2561459_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47088.1\|2561490_2561652_+	putative membrane protein	NA	NA	NA	NA
SPR47089.1\|2561709_2562048_+	putative exported protein	NA	NA	NA	NA
SPR47090.1\|2562196_2563147_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_17

2599446 : 2659956

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47126.1\|2599446_2600397_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47127.1\|2600552_2600879_-	monovalent cation/H+ antiporter subunit G	NA	NA	NA	NA
SPR47128.1\|2600875_2601157_-	pH adaptation potassium efflux system protein F	NA	NA	NA	NA
SPR47129.1\|2601156_2601633_-	monovalent cation/H+ antiporter subunit E	NA	NA	NA	NA
SPR47130.1\|2601632_2603261_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
SPR47131.1\|2603257_2603602_-	putative pH adaptation potassium efflux protein	NA	NA	NA	NA
SPR47132.1\|2603601_2606535_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
SPR47133.1\|2606956_2607703_+	partial	NA	NA	NA	NA
SPR47134.1\|2607693_2608644_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47135.1\|2608742_2609039_-	putative membrane protein	NA	NA	NA	NA
SPR47136.1\|2609160_2610063_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47137.1\|2610067_2610781_-	short chain dehydrogenase	NA	NA	NA	NA
SPR47138.1\|2610794_2611766_-	exported protein	NA	NA	NA	NA
SPR47139.1\|2611869_2613282_+	hypothetical protein	NA	NA	NA	NA
SPR47140.1\|2613515_2613866_+	transcriptional regulator	NA	NA	NA	NA
SPR47141.1\|2613869_2615057_+	membrane protein	NA	NA	NA	NA
SPR47142.1\|2615230_2615503_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.9e-28	71.1
SPR47143.1\|2615480_2616218_+	NADPH-dependent FMN reductase	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
SPR47144.1\|2616214_2616403_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47145.1\|2616511_2617462_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47146.1\|2617458_2617887_-	LamB/YcsF domain protein	NA	NA	NA	NA
SPR47147.1\|2618080_2619274_-	partial	NA	NA	NA	NA
SPR47148.1\|2619288_2620251_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
SPR47149.1\|2620366_2621320_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47150.1\|2621329_2622322_-	exported protein	NA	NA	NA	NA
SPR47151.1\|2622373_2623129_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
SPR47152.1\|2623193_2623883_-	short chain dehydrogenase	NA	NA	NA	NA
SPR47153.1\|2624104_2625055_+	hydrolase	NA	NA	NA	NA
SPR47154.1\|2625085_2626282_+	lactate dehydrogenase	NA	NA	NA	NA
SPR47155.1\|2626278_2627052_+	short-chain dehydrogenase	NA	NA	NA	NA
SPR47156.1\|2627119_2628091_+	exported protein	NA	NA	NA	NA
SPR47157.1\|2628176_2629121_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47158.1\|2629098_2629968_-	alpha-ketoglutarate-dependent 24-dichlorophenoxyacetate dioxygenase	NA	NA	NA	NA
SPR47159.1\|2630211_2630835_+	glutathione S-transferase	NA	NA	NA	NA
SPR47160.1\|2630976_2631147_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47161.1\|2631149_2631449_+	putative DNA-binding protein	NA	NA	NA	NA
SPR47162.1\|2631462_2634537_-	autotransporter	NA	NA	NA	NA
SPR47163.1\|2634666_2635341_+	response regulator protein	NA	NA	NA	NA
SPR47164.1\|2635333_2637148_+	two component system sensor histidine kinase	NA	NA	NA	NA
SPR47165.1\|2637201_2638149_-	hypothetical protein	NA	NA	NA	NA
SPR47166.1\|2638253_2639204_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47167.1\|2639756_2641382_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
SPR47168.1\|2641431_2642466_-	nonspecific acid phosphatase	NA	NA	NA	NA
SPR47169.1\|2642468_2643815_-	exported protein	NA	NA	NA	NA
SPR47170.1\|2643811_2645326_-	hypothetical protein	NA	NA	NA	NA
SPR47171.1\|2645316_2646804_-	von Willebrand factor type A domain protein	NA	NA	NA	NA
SPR47172.1\|2646800_2647742_-	hypothetical protein	NA	NA	NA	NA
SPR47173.1\|2647750_2648719_-	regulatory protein	NA	NA	NA	NA
SPR47174.1\|2648774_2649227_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA
SPR47175.1\|2650258_2651227_+	exported protein	NA	NA	NA	NA
SPR47176.1\|2651404_2652394_+	exported protein	NA	NA	NA	NA
SPR47177.1\|2652440_2653199_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
SPR47178.1\|2653388_2654126_+	membrane protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
SPR47179.1\|2654224_2655175_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47180.1\|2655359_2656142_+	high-affinity branched-chain amino acid ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
SPR47181.1\|2656135_2656837_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
SPR47182.1\|2657076_2657679_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
SPR47183.1\|2657654_2658542_-	oxidoreductase	NA	NA	NA	NA
SPR47184.1\|2659005_2659956_+\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_18

2699233 : 2765562

Ectocarpus_siliculosus_virus(10.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47215.1\|2699233_2700184_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47216.1\|2700203_2701109_-	hypothetical protein	NA	NA	NA	NA
SPR47217.1\|2701186_2701885_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47218.1\|2702044_2702989_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47219.1\|2702998_2704486_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
SPR47220.1\|2704485_2705553_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
SPR47221.1\|2705616_2707029_-	glutamine synthetase	NA	NA	NA	NA
SPR47222.1\|2707214_2708435_-	coproporphyrinogen III oxidase	NA	NA	NA	NA
SPR47223.1\|2708456_2709407_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47224.1\|2709505_2710147_-	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
SPR47225.1\|2710273_2712076_+	hypothetical protein	NA	NA	NA	NA
SPR47226.1\|2711953_2713645_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-10	27.1
SPR47227.1\|2713727_2714633_-	probable transcriptional regulator	NA	NA	NA	NA
SPR47228.1\|2714814_2716191_+	hypothetical protein	NA	NA	NA	NA
SPR47229.1\|2716357_2717098_-	ribonuclease PH	NA	NA	NA	NA
SPR47230.1\|2717234_2718161_+	hypothetical protein	NA	NA	NA	NA
SPR47231.1\|2718433_2718589_+	hypothetical protein	NA	NA	NA	NA
SPR47232.1\|2718601_2718730_+	hypothetical protein	NA	NA	NA	NA
SPR47233.1\|2718726_2719011_+	transcriptional regulator	NA	NA	NA	NA
SPR47234.1\|2719069_2720560_-	AMP nucleosidase	NA	NA	NA	NA
SPR47235.1\|2720804_2721404_+	NlpC/P60 family protein	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
SPR47236.1\|2721408_2722179_-	putative oxidoreductase	NA	NA	NA	NA
SPR47237.1\|2722416_2723130_+	cytochrome C	NA	NA	NA	NA
SPR47238.1\|2723126_2724044_+	cytochrome C	NA	NA	NA	NA
SPR47239.1\|2724179_2724812_+	guanylate kinase	A0A218KC48	Bacillus_phage	2.4e-13	33.9
SPR47240.1\|2724853_2725057_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
SPR47241.1\|2725081_2727361_+	guanosine-3'5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
SPR47242.1\|2727373_2728102_-	glutamine transport ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-35	39.3
SPR47243.1\|2728098_2728698_-	glutamine ABC transporter permease	NA	NA	NA	NA
SPR47244.1\|2728826_2729579_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47245.1\|2729760_2730711_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47246.1\|2731119_2731518_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47247.1\|2731603_2732509_+	dihydrodipicolinate synthase	NA	NA	NA	NA
SPR47248.1\|2732526_2733648_+	lipoprotein	NA	NA	NA	NA
SPR47249.1\|2733736_2734351_-	serotype 3 fimbrial subunit	NA	NA	NA	NA
SPR47250.1\|2734405_2734741_-	hypothetical protein	NA	NA	NA	NA
SPR47251.1\|2735009_2736197_-	hypothetical protein	NA	NA	NA	NA
SPR47252.1\|2736193_2738791_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
SPR47253.1\|2739045_2739261_+	hypothetical protein	NA	NA	NA	NA
SPR47254.1\|2739716_2740271_-	chromate reductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
SPR47255.1\|2740541_2741099_+	membrane protein	NA	NA	NA	NA
SPR47256.1\|2741210_2742515_+	exported protein	NA	NA	NA	NA
SPR47257.1\|2742610_2744023_+	thiol oxidoreductase	NA	NA	NA	NA
SPR47258.1\|2744128_2745130_+	aminopeptidase	NA	NA	NA	NA
SPR47259.1\|2745110_2746232_+	exported protein	NA	NA	NA	NA
SPR47260.1\|2746330_2747281_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47261.1\|2747277_2747904_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47262.1\|2747963_2748815_+	membrane protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
SPR47263.1\|2748981_2749518_+	hypothetical protein	NA	NA	NA	NA
SPR47264.1\|2749514_2750279_+	hypothetical protein	NA	NA	NA	NA
SPR47265.1\|2750348_2751299_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47266.1\|2751397_2752006_-	recombination protein RecR	NA	NA	NA	NA
SPR47267.1\|2752056_2752383_-	nucleoid-associated protein	NA	NA	NA	NA
SPR47268.1\|2752429_2754655_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.2e-43	38.5
SPR47269.1\|2755322_2758727_-	nuclease/helicase	NA	NA	NA	NA
SPR47270.1\|2758739_2761400_-	hypothetical protein	NA	NA	NA	NA
SPR47271.1\|2761421_2761568_-	hypothetical protein	NA	NA	NA	NA
SPR47272.1\|2761603_2762806_-	membrane protein	NA	NA	NA	NA
SPR47273.1\|2763492_2764605_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
SPR47274.1\|2764611_2765562_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_19

2805235 : 2865675

Planktothrix_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47320.1\|2805235_2807185_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
SPR47321.1\|2807572_2808349_+	DNA-binding response regulator	NA	NA	NA	NA
SPR47322.1\|2808354_2808747_+	hypothetical protein	NA	NA	NA	NA
SPR47323.1\|2809168_2810119_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47324.1\|2810115_2810754_-	hypothetical protein	A0A127AWB9	Bacillus_phage	2.0e-20	37.3
SPR47325.1\|2811244_2812195_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47326.1\|2812674_2813331_-	N-(5'-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA
SPR47327.1\|2813345_2815013_-	membrane protein	NA	NA	NA	NA
SPR47328.1\|2815015_2815645_-	membrane protein	NA	NA	NA	NA
SPR47329.1\|2815856_2816951_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47330.1\|2817095_2817908_-\|tRNA	tRNA pseudouridine synthase A	NA	NA	NA	NA
SPR47331.1\|2817911_2819495_-	membrane protein	NA	NA	NA	NA
SPR47332.1\|2819665_2820796_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
SPR47333.1\|2820982_2822059_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
SPR47334.1\|2822140_2822791_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
SPR47335.1\|2822805_2824209_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
SPR47336.1\|2824492_2825311_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47337.1\|2825307_2826012_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
SPR47338.1\|2826911_2828027_+	hypothetical protein	NA	NA	NA	NA
SPR47339.1\|2828060_2828435_-	exported protein	NA	NA	NA	NA
SPR47340.1\|2828457_2829615_-	formate dehydrogenase subunit C	NA	NA	NA	NA
SPR47341.1\|2829627_2829861_-	putative lipoprotein	NA	NA	NA	NA
SPR47342.1\|2829857_2830250_-	formate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
SPR47343.1\|2830495_2833465_-	formate dehydrogenase	NA	NA	NA	NA
SPR47344.1\|2833479_2833689_-	hypothetical protein	NA	NA	NA	NA
SPR47345.1\|2833840_2834470_-	hypothetical protein	NA	NA	NA	NA
SPR47346.1\|2834466_2836524_-	iron-sulfur binding protein	NA	NA	NA	NA
SPR47347.1\|2836580_2837261_-	hypothetical protein	NA	NA	NA	NA
SPR47348.1\|2837257_2837818_-	hypothetical protein	NA	NA	NA	NA
SPR47349.1\|2837824_2838922_-	putative iron sulfur binding protein	NA	NA	NA	NA
SPR47350.1\|2839074_2839668_+	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA
SPR47351.1\|2839664_2840957_+	molybdopterin biosynthesis protein	NA	NA	NA	NA
SPR47352.1\|2840970_2841513_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
SPR47353.1\|2841522_2842359_-	lipoprotein	NA	NA	NA	NA
SPR47354.1\|2842392_2843454_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
SPR47355.1\|2843495_2844521_-	GGDEF domain-containing protein	NA	NA	NA	NA
SPR47356.1\|2845007_2845958_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47357.1\|2845944_2846103_-	hypothetical protein	NA	NA	NA	NA
SPR47358.1\|2846136_2847831_+	ABC transporter permease	NA	NA	NA	NA
SPR47359.1\|2847827_2848913_+	probable ATP-binding component of ABC transporter	G9BWD6	Planktothrix_phage	6.4e-27	37.7
SPR47360.1\|2848960_2849860_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47361.1\|2849870_2850515_+	histidine phosphatase family protein	NA	NA	NA	NA
SPR47362.1\|2850679_2851387_-	partial	NA	NA	NA	NA
SPR47363.1\|2851536_2854779_-	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA
SPR47364.1\|2854789_2855944_-	carbamoyl phosphate synthase small subunit	R4TGJ8	Halovirus	3.3e-53	35.4
SPR47365.1\|2856170_2857133_+	transaldolase B	H6WFR1	Cyanophage	7.5e-11	29.2
SPR47366.1\|2857231_2858182_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47367.1\|2858280_2859231_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47368.1\|2859240_2859930_-	membrane protein	NA	NA	NA	NA
SPR47369.1\|2859989_2860427_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47370.1\|2860472_2861366_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
SPR47371.1\|2861413_2862586_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
SPR47372.1\|2862582_2863737_-	probable acyl-CoA dehydrogenase	NA	NA	NA	NA
SPR47373.1\|2863933_2864284_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47374.1\|2864273_2864708_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47375.1\|2864724_2865675_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_20

2911768 : 2948482

Planktothrix_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47422.1\|2911768_2912719_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47423.1\|2912817_2913768_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47424.1\|2913764_2914559_-	hypothetical protein	NA	NA	NA	NA
SPR47425.1\|2914590_2915295_-	oxidoreductase	NA	NA	NA	NA
SPR47426.1\|2915369_2916170_-	SurF1-family protein	NA	NA	NA	NA
SPR47427.1\|2916166_2916574_-	cytochrome ubiquinol oxidase subunit IV	NA	NA	NA	NA
SPR47428.1\|2916570_2917212_-	cytochrome ubiquinol oxidase subunit III	NA	NA	NA	NA
SPR47429.1\|2917204_2919226_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
SPR47430.1\|2919262_2919754_-	partial	NA	NA	NA	NA
SPR47431.1\|2920465_2921797_+	membrane transport protein	NA	NA	NA	NA
SPR47432.1\|2921793_2922744_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47433.1\|2923297_2924344_-\|protease	ATP-dependent protease	NA	NA	NA	NA
SPR47434.1\|2924450_2924717_-	hypothetical protein	NA	NA	NA	NA
SPR47435.1\|2925424_2925763_+	nitrogen regulatory protein P-II	NA	NA	NA	NA
SPR47436.1\|2925788_2926514_+	ammonium transporter	NA	NA	NA	NA
SPR47437.1\|2927091_2930031_-	autotransporter BapC	NA	NA	NA	NA
SPR47438.1\|2930314_2930917_-	TetR family transcriptional regulator	NA	NA	NA	NA
SPR47439.1\|2931013_2932303_+	membrane transport protein	NA	NA	NA	NA
SPR47440.1\|2932360_2933092_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
SPR47441.1\|2933088_2933892_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
SPR47442.1\|2933888_2934977_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
SPR47443.1\|2934973_2935903_-	ABC transporter permease	NA	NA	NA	NA
SPR47444.1\|2936051_2937197_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47445.1\|2937218_2938169_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47446.1\|2938499_2942321_-	trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA
SPR47447.1\|2942477_2943146_-	lipoprotein	NA	NA	NA	NA
SPR47448.1\|2943150_2944824_-	membrane protein	NA	NA	NA	NA
SPR47449.1\|2944842_2946039_-	exported protein	NA	NA	NA	NA
SPR47450.1\|2946166_2948482_-\|protease	ATP-dependent Clp protease ATP-binding protein	A0A223W0B1	Agrobacterium_phage	4.1e-164	41.9

DBSCAN-SWA_21

2955981 : 3013963

uncultured_Mediterranean_phage(28.57%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47453.1\|2955981_2956296_-\|protease	ATP-dependent Clp protease adaptor protein ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
SPR47454.1\|2956523_2956769_+	putative cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
SPR47455.1\|2956890_2957382_+	exported protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.8e-14	42.2
SPR47456.1\|2957481_2958687_-	beta-ketoadipyl CoA thiolase	NA	NA	NA	NA
SPR47457.1\|2958802_2960200_-	putative chloride-channel protein	NA	NA	NA	NA
SPR47458.1\|2960316_2960895_-	superoxide dismutase	NA	NA	NA	NA
SPR47459.1\|2962526_2963477_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47460.1\|2963757_2964378_+	putative biopolymer transport protein	NA	NA	NA	NA
SPR47461.1\|2964374_2964788_+	biopolymer transport protein	NA	NA	NA	NA
SPR47462.1\|2964784_2965828_+	putative tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
SPR47463.1\|2965883_2966072_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47464.1\|2966081_2966846_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
SPR47465.1\|2966936_2967593_+	adenylate kinase	NA	NA	NA	NA
SPR47466.1\|2967684_2968443_+	short-chain dehydrogenase	NA	NA	NA	NA
SPR47467.1\|2968468_2970070_+	MurJ-like protein	NA	NA	NA	NA
SPR47468.1\|2970270_2971275_+	membrane protein	NA	NA	NA	NA
SPR47469.1\|2971375_2971639_+	30s ribosomal protein s20	NA	NA	NA	NA
SPR47470.1\|2971756_2972524_-	5-keto-4-deoxy-D-glucarate aldolase	NA	NA	NA	NA
SPR47471.1\|2973123_2974074_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47472.1\|2974070_2974622_-	partial	NA	NA	NA	NA
SPR47473.1\|2975449_2976409_-	partial	NA	NA	NA	NA
SPR47474.1\|2976457_2977570_-	malate dehydrogenase	NA	NA	NA	NA
SPR47475.1\|2977626_2978577_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47476.1\|2978785_2979007_-	lipoprotein	NA	NA	NA	NA
SPR47477.1\|2979220_2980627_-	threonine synthase	NA	NA	NA	NA
SPR47478.1\|2980623_2981928_-	homoserine dehydrogenase	NA	NA	NA	NA
SPR47479.1\|2981924_2983112_-	aminotransferase	NA	NA	NA	NA
SPR47480.1\|2983328_2983781_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47481.1\|2983783_2984248_+	peroxiredoxin	NA	NA	NA	NA
SPR47482.1\|2984327_2986007_+	phosphate starvation protein PhoH	A0A2I7SAD7	Vibrio_phage	7.3e-70	36.7
SPR47483.1\|2986111_2987089_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
SPR47484.1\|2987168_2988137_+	exported protein	NA	NA	NA	NA
SPR47485.1\|2988157_2989531_-	replicative DNA helicase	C7BGG1	Burkholderia_phage	4.0e-135	58.2
SPR47486.1\|2989527_2990364_-	hypothetical protein	NA	NA	NA	NA
SPR47487.1\|2990480_2990936_-	50S ribosomal protein L9	NA	NA	NA	NA
SPR47488.1\|2990951_2991224_-	30s ribosomal protein s18	NA	NA	NA	NA
SPR47489.1\|2991316_2991565_-	primosomal replication protein n	NA	NA	NA	NA
SPR47490.1\|2991687_2992068_-	30S ribosomal protein S6	NA	NA	NA	NA
SPR47491.1\|2992287_2993085_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47492.1\|2993241_2995104_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
SPR47493.1\|2995153_2996065_-	geranyltranstransferase	NA	NA	NA	NA
SPR47494.1\|2996069_2996336_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
SPR47495.1\|2996422_2997292_-	transcriptional regulator	NA	NA	NA	NA
SPR47496.1\|2997427_2998393_+	exported protein	NA	NA	NA	NA
SPR47497.1\|2998536_2999487_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47498.1\|2999612_3000623_+	membrane protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.6e-16	24.6
SPR47499.1\|3000770_3001922_+	iron-sulfur protein	NA	NA	NA	NA
SPR47500.1\|3002005_3002869_-	IS481 family	NA	NA	NA	NA
SPR47501.1\|3003064_3004537_-	cation transport protein	NA	NA	NA	NA
SPR47502.1\|3004547_3004958_-	putative thioesterase	NA	NA	NA	NA
SPR47503.1\|3005021_3006068_-	putative integral membrane protein	NA	NA	NA	NA
SPR47504.1\|3006174_3007053_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47505.1\|3007066_3008263_-	hydrolase	NA	NA	NA	NA
SPR47506.1\|3008339_3010016_+	long-chain-fatty-acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.3e-33	28.1
SPR47507.1\|3010012_3010963_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47508.1\|3011083_3011980_-	inositol monophosphatase	NA	NA	NA	NA
SPR47509.1\|3012137_3013325_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34)oxidoreductase MnmC	NA	NA	NA	NA
SPR47510.1\|3013270_3013963_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34)oxidoreductase MnmC	NA	NA	NA	NA

DBSCAN-SWA_22

3019722 : 3065292

Bacillus_virus(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47515.1\|3019722_3020673_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47516.1\|3020753_3021902_+	alcohol dehydrogenase	NA	NA	NA	NA
SPR47517.1\|3021958_3022909_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47518.1\|3023007_3023313_-	hypothetical protein	NA	NA	NA	NA
SPR47519.1\|3023341_3023776_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47520.1\|3023777_3025022_-	hypothetical protein	NA	NA	NA	NA
SPR47521.1\|3025018_3025669_-	GntR family transcriptional regulator	NA	NA	NA	NA
SPR47522.1\|3025743_3026727_-	exported protein	NA	NA	NA	NA
SPR47523.1\|3027074_3027422_+	hypothetical protein	NA	NA	NA	NA
SPR47524.1\|3027892_3028792_+	conserved hypothetical protein	NA	NA	NA	NA
SPR47525.1\|3028788_3029655_+	ABC transporter permease	NA	NA	NA	NA
SPR47526.1\|3029641_3030469_+	ABC transport protein inner membrane component	NA	NA	NA	NA
SPR47527.1\|3030479_3031607_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
SPR47528.1\|3031599_3032592_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
SPR47529.1\|3032684_3033923_+	IS481 family	NA	NA	NA	NA
SPR47530.1\|3033967_3035227_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
SPR47531.1\|3035233_3035986_+	DNA-binding protein	NA	NA	NA	NA
SPR47532.1\|3036037_3036223_-	hypothetical protein	NA	NA	NA	NA
SPR47533.1\|3036381_3036963_+	putative MerR-family transcriptional regulator	NA	NA	NA	NA
SPR47534.1\|3037042_3037654_+	hydrolase	NA	NA	NA	NA
SPR47535.1\|3037798_3039907_+	exported protein	NA	NA	NA	NA
SPR47536.1\|3039903_3040854_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47537.1\|3040957_3041521_-	TetR family transcriptional regulator	NA	NA	NA	NA
SPR47538.1\|3041681_3042422_+	short-chain dehydrogenase	NA	NA	NA	NA
SPR47539.1\|3042739_3043363_+	IS3 family	NA	NA	NA	NA
SPR47540.1\|3043823_3044603_+	hypothetical protein	NA	NA	NA	NA
SPR47541.1\|3044433_3045324_-	hypothetical protein	NA	NA	NA	NA
SPR47542.1\|3045336_3046287_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47543.1\|3046273_3047314_-	hypothetical protein	NA	NA	NA	NA
SPR47544.1\|3047322_3047934_-	partial	NA	NA	NA	NA
SPR47545.1\|3048250_3049201_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47546.1\|3049197_3050106_-	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47547.1\|3050232_3051069_+	probable 3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
SPR47548.1\|3051581_3052691_+	outer membrane porin protein	NA	NA	NA	NA
SPR47549.1\|3052752_3053703_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47550.1\|3053895_3054678_-	short chain dehydrogenase	NA	NA	NA	NA
SPR47551.1\|3054691_3055441_-	short chain dehydrogenase	A0A0M4JSW6	Mollivirus	1.2e-11	26.4
SPR47552.1\|3055468_3056815_-	membrane transport protein	NA	NA	NA	NA
SPR47553.1\|3056840_3057770_-	hypothetical protein	NA	NA	NA	NA
SPR47554.1\|3057885_3058791_+	LysR family transcriptional regulator	NA	NA	NA	NA
SPR47555.1\|3058787_3059738_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47556.1\|3059857_3061057_-	aromatic amino acid aminotransferase	NA	NA	NA	NA
SPR47557.1\|3061129_3061822_-	hypothetical protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
SPR47558.1\|3061870_3064297_-	cation-transporting ATPase	A0A218MNH6	uncultured_virus	1.2e-86	33.8
SPR47559.1\|3064341_3065292_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_23

3239200 : 3311960

Xanthomonas_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47719.1\|3239200_3240151_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47720.1\|3240159_3240708_+	lipid A palmitoyltransferase	NA	NA	NA	NA
SPR47721.1\|3240704_3241313_-	hypothetical protein	NA	NA	NA	NA
SPR47722.1\|3241495_3241954_-	glutamate uptake regulatory protein	NA	NA	NA	NA
SPR47723.1\|3241972_3243229_-	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
SPR47724.1\|3243284_3244097_-	oxidoreductase	NA	NA	NA	NA
SPR47725.1\|3244211_3244766_+	cysteine dioxygenase	NA	NA	NA	NA
SPR47726.1\|3244775_3245765_-	membrane protein	NA	NA	NA	NA
SPR47727.1\|3245944_3246664_-	VOC family protein	NA	NA	NA	NA
SPR47728.1\|3246680_3249416_-	protein translocase subunit SecA	NA	NA	NA	NA
SPR47729.1\|3249595_3250582_-	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	3.4e-27	51.8
SPR47730.1\|3250710_3251118_+	hypothetical protein	NA	NA	NA	NA
SPR47731.1\|3251229_3252153_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA
SPR47732.1\|3252381_3253566_-	cell division protein FtsZ	NA	NA	NA	NA
SPR47733.1\|3253754_3254981_-	cell division protein FtsA	NA	NA	NA	NA
SPR47734.1\|3254985_3255807_-	cell division protein FtsQ	NA	NA	NA	NA
SPR47735.1\|3255819_3256770_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
SPR47736.1\|3256766_3258173_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
SPR47737.1\|3258169_3259243_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA
SPR47738.1\|3259239_3260433_-	lipid II flippase FtsW	NA	NA	NA	NA
SPR47739.1\|3260429_3261962_-	UDP-N-acetylmuramoylalanine--D-glutamate ligase	NA	NA	NA	NA
SPR47740.1\|3261958_3263128_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
SPR47741.1\|3263117_3265955_-	bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase	NA	NA	NA	NA
SPR47742.1\|3265951_3267682_-	peptidoglycan synthetase	NA	NA	NA	NA
SPR47743.1\|3267678_3267957_-	cell division protein FtsL	NA	NA	NA	NA
SPR47744.1\|3267956_3269051_-	S-adenosyl-methyltransferase	NA	NA	NA	NA
SPR47745.1\|3269059_3269410_-	cell division protein MraZ	NA	NA	NA	NA
SPR47746.1\|3270290_3272099_+	ABC transporter ATP-binding protein	A0A1B0RXA0	Streptococcus_phage	1.6e-43	28.6
SPR47747.1\|3272138_3273203_-	dihydroorotase	NA	NA	NA	NA
SPR47748.1\|3273214_3274408_-	hydrolase	NA	NA	NA	NA
SPR47749.1\|3274557_3274836_+	hypothetical protein	NA	NA	NA	NA
SPR47750.1\|3275164_3275530_-	putative membrane protein	NA	NA	NA	NA
SPR47751.1\|3282281_3282743_-	leucine-responsive regulatory protein	NA	NA	NA	NA
SPR47752.1\|3282910_3284023_+	hemolysin	NA	NA	NA	NA
SPR47753.1\|3284090_3284651_-	methionine sulfoxide reductase A	NA	NA	NA	NA
SPR47754.1\|3284674_3285007_-	cytochrome C552 precursor	NA	NA	NA	NA
SPR47755.1\|3284990_3286679_-	dihydroxy-acid dehydratase	NA	NA	NA	NA
SPR47756.1\|3286798_3287587_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
SPR47757.1\|3287561_3288134_-	DUF541 domain-containing protein	NA	NA	NA	NA
SPR47758.1\|3288294_3289245_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47759.1\|3289689_3290001_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47760.1\|3290000_3290447_-	hypothetical protein	NA	NA	NA	NA
SPR47761.1\|3290693_3291644_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47762.1\|3291742_3292693_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47763.1\|3292982_3293447_+	putative membrane protein	NA	NA	NA	NA
SPR47764.1\|3293461_3294967_+	membrane protein	NA	NA	NA	NA
SPR47765.1\|3295223_3296828_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA
SPR47766.1\|3296955_3297789_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
SPR47767.1\|3297837_3298191_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
SPR47768.1\|3298229_3299180_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47769.1\|3299318_3300071_+	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
SPR47770.1\|3300345_3302034_+	ATP-dependent RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-48	32.9
SPR47771.1\|3302122_3303313_+	hypothetical protein	NA	NA	NA	NA
SPR47772.1\|3303327_3304422_-\|tRNA	tRNA CCA-pyrophosphorylase	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
SPR47773.1\|3304418_3306545_-	putative transglycosylase	A0A0S2SXL7	Bacillus_phage	5.5e-14	36.6
SPR47774.1\|3306557_3307238_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
SPR47775.1\|3307473_3308889_+	integral membrane transport protein	NA	NA	NA	NA
SPR47776.1\|3308890_3309910_+	aminohydrolase	A0A2K9L473	Tupanvirus	3.4e-22	31.7
SPR47777.1\|3309973_3310945_+	transcriptional regulator	NA	NA	NA	NA
SPR47778.1\|3311009_3311960_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_24

3331659 : 3373873

Erwinia_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47799.1\|3331659_3332199_+\|protease	ATP-dependent protease subunit HsIV	NA	NA	NA	NA
SPR47800.1\|3332220_3333555_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
SPR47801.1\|3333568_3333874_-	RND transporter	NA	NA	NA	NA
SPR47802.1\|3334298_3334880_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
SPR47803.1\|3334961_3335912_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47804.1\|3336010_3336961_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47805.1\|3337177_3338752_+	phospholipase D	NA	NA	NA	NA
SPR47806.1\|3338758_3339868_-	molybdenum ABC transporter ATP-binding protein ModC	G9BWD6	Planktothrix_phage	7.5e-23	34.5
SPR47807.1\|3339879_3340560_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA
SPR47808.1\|3340581_3341337_-	molybdate-binding periplasmic protein precursor	NA	NA	NA	NA
SPR47809.1\|3341472_3342354_-	putative hydrolase	NA	NA	NA	NA
SPR47810.1\|3342444_3343026_+	hypothetical protein	NA	NA	NA	NA
SPR47811.1\|3343118_3343241_-	hypothetical protein	NA	NA	NA	NA
SPR47812.1\|3343286_3343586_-	exported protein	NA	NA	NA	NA
SPR47813.1\|3343737_3344217_-	membrane protein	NA	NA	NA	NA
SPR47814.1\|3344232_3344598_-	hypothetical protein	NA	NA	NA	NA
SPR47815.1\|3344936_3346373_-	probable TonB-dependent receptor	NA	NA	NA	NA
SPR47816.1\|3346369_3346798_-	regulatory protein	NA	NA	NA	NA
SPR47817.1\|3346888_3347839_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47818.1\|3347920_3348292_-	partial	NA	NA	NA	NA
SPR47819.1\|3348366_3349140_-	putative molybdate-binding periplasmic protein	NA	NA	NA	NA
SPR47820.1\|3349272_3350283_-	putative exported protein	NA	NA	NA	NA
SPR47821.1\|3350434_3352090_-	gamma-glutamyltranspeptidase	NA	NA	NA	NA
SPR47822.1\|3352144_3352486_-	conserved hypothetical protein	NA	NA	NA	NA
SPR47823.1\|3352499_3353939_-	hypothetical protein	NA	NA	NA	NA
SPR47824.1\|3354071_3354887_-	probable MerR-family transcriptional regulator	NA	NA	NA	NA
SPR47825.1\|3355080_3356031_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47826.1\|3356027_3356990_-	MFS transporter	NA	NA	NA	NA
SPR47827.1\|3357424_3358366_+	putative membrane protein	NA	NA	NA	NA
SPR47828.1\|3358592_3359333_+	putative TetR-family transcriptional regulator	NA	NA	NA	NA
SPR47829.1\|3359418_3360369_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47830.1\|3360755_3361241_+	partial	NA	NA	NA	NA
SPR47831.1\|3361256_3361760_+	partial	NA	NA	NA	NA
SPR47832.1\|3361810_3363382_-	DNA-binding response regulator	NA	NA	NA	NA
SPR47833.1\|3363714_3365568_+	autotransporter	NA	NA	NA	NA
SPR47834.1\|3365612_3368177_+	autotransporter	NA	NA	NA	NA
SPR47835.1\|3368595_3369546_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47836.1\|3370695_3372126_-	hypothetical protein	NA	NA	NA	NA
SPR47837.1\|3372922_3373873_-\|transposase	transposase IS481 family	NA	NA	NA	NA

DBSCAN-SWA_25

3532301 : 3641779

104

Acinetobacter_phage(21.05%)

tRNA,integrase,transposase

attL 3584811:3584828|attR 3619612:3619629

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SPR47973.1\|3532301_3533252_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47974.1\|3533350_3534484_-	partial	NA	NA	NA	NA
SPR47975.1\|3535008_3535998_+	partial	NA	NA	NA	NA
SPR47976.1\|3535994_3536153_+	hypothetical protein	NA	NA	NA	NA
SPR47977.1\|3536173_3536962_-	indole-3-glycerol phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
SPR47978.1\|3536958_3537990_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
SPR47979.1\|3538008_3538572_-	anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
SPR47980.1\|3538627_3540148_-	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
SPR47981.1\|3540411_3541116_-	phosphoglycolate phosphatase	NA	NA	NA	NA
SPR47982.1\|3541123_3541852_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
SPR47983.1\|3541966_3542341_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
SPR47984.1\|3542383_3543673_+	membrane-bound transglycosylase	NA	NA	NA	NA
SPR47985.1\|3543669_3544839_+	ubiquinone biosynthesis hydroxylase family protein	NA	NA	NA	NA
SPR47986.1\|3544865_3545675_+	thiol:disulfide interchange protein	NA	NA	NA	NA
SPR47987.1\|3545734_3546670_+	2-hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
SPR47988.1\|3546682_3547633_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47989.1\|3547731_3548694_-\|tRNA	tRNA 2-thiocytidine biosynthesis protein	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
SPR47990.1\|3548725_3549085_-	dihydroneopterin aldolase	NA	NA	NA	NA
SPR47991.1\|3549209_3550112_+	oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
SPR47992.1\|3550113_3551880_-	hypothetical protein	NA	NA	NA	NA
SPR47993.1\|3551920_3552697_+	enoyl-CoA hydratase	NA	NA	NA	NA
SPR47994.1\|3552993_3554061_+	hypothetical protein	NA	NA	NA	NA
SPR47995.1\|3554020_3554971_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR47996.1\|3555822_3556143_+	ABC transporter permease	NA	NA	NA	NA
SPR47997.1\|3556215_3557097_+	ATP synthase A chain	NA	NA	NA	NA
SPR47998.1\|3557213_3557456_+	ATP synthase c chain	NA	NA	NA	NA
SPR47999.1\|3557593_3558064_+	ATP synthase B chain	NA	NA	NA	NA
SPR48000.1\|3558076_3558616_+	ATP synthase delta chain	NA	NA	NA	NA
SPR48001.1\|3558650_3560192_+	ATP synthase subunit alpha	NA	NA	NA	NA
SPR48002.1\|3560290_3561196_+	ATP synthase subunit gamma	NA	NA	NA	NA
SPR48003.1\|3561238_3562639_+	ATP synthase subunit beta	NA	NA	NA	NA
SPR48004.1\|3562648_3563071_+	ATP synthase epsilon chain	NA	NA	NA	NA
SPR48005.1\|3563253_3564138_+	hypothetical protein	NA	NA	NA	NA
SPR48006.1\|3564213_3565290_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
SPR48007.1\|3565596_3567699_+	primosomal protein N'	NA	NA	NA	NA
SPR48008.1\|3567741_3569811_+	ATP-dependent DNA helicase	A7KV33	Bacillus_phage	2.6e-101	37.3
SPR48009.1\|3569909_3570860_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48010.1\|3570988_3572122_-	peptidase	NA	NA	NA	NA
SPR48011.1\|3572165_3573071_-	hypothetical protein	NA	NA	NA	NA
SPR48012.1\|3573073_3574774_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-15	32.7
SPR48013.1\|3574770_3575691_-	binding-protein-dependent transport permease	NA	NA	NA	NA
SPR48014.1\|3575698_3576676_-	putative binding-protein-dependent transport permease	NA	NA	NA	NA
SPR48015.1\|3576734_3577694_-	succinylglutamate desuccinylase	NA	NA	NA	NA
SPR48016.1\|3577817_3578738_-	partial	NA	NA	NA	NA
SPR48017.1\|3579743_3579980_-	hypothetical protein	NA	NA	NA	NA
SPR48018.1\|3580106_3580970_-	ADP-dependent (S)-NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
SPR48019.1\|3581058_3581880_+	enoyl-CoA hydratase	NA	NA	NA	NA
SPR48020.1\|3581959_3582697_-	putative enoyl-CoA hydratase/isomerase	NA	NA	NA	NA
SPR48021.1\|3582693_3583665_-	hypothetical protein	NA	NA	NA	NA
SPR48022.1\|3583838_3584462_+	TetR family transcriptional repressor	NA	NA	NA	NA
SPR48023.1\|3584506_3585655_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
3584811:3584828	attL	NA	NA	NA	NA
SPR48024.1\|3585638_3586394_-	hypothetical protein	NA	NA	NA	NA
SPR48025.1\|3587075_3587897_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
SPR48026.1\|3587978_3588929_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48027.1\|3589269_3590220_+\|transposase	transposase IS1002 family	NA	NA	NA	NA
SPR48028.1\|3590318_3591269_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48029.1\|3591565_3592063_+	blue copper protein	NA	NA	NA	NA
SPR48030.1\|3592105_3593881_+	copper resitance protein	NA	NA	NA	NA
SPR48031.1\|3593888_3594755_+	copper resistance protein	NA	NA	NA	NA
SPR48032.1\|3594761_3595487_-	enoyl-CoA hydratase/isomerase	NA	NA	NA	NA
SPR48033.1\|3596061_3596829_+	hypothetical protein	NA	NA	NA	NA
SPR48034.1\|3596665_3597436_-	IclR family transcriptional regulator	NA	NA	NA	NA
SPR48035.1\|3597749_3598340_+	cysteine dioxygenase	NA	NA	NA	NA
SPR48036.1\|3598373_3599702_-	amidase	NA	NA	NA	NA
SPR48037.1\|3599776_3600922_-	binding-protein-dependent transport protein	NA	NA	NA	NA
SPR48038.1\|3601033_3602032_+\|integrase	integrase	NA	NA	NA	NA
SPR48039.1\|3601997_3602429_+	membrane protein	NA	NA	NA	NA
SPR48040.1\|3602563_3603472_+	MFS transporter	NA	NA	NA	NA
SPR48041.1\|3603945_3604830_+	membrane protein	NA	NA	NA	NA
SPR48042.1\|3604826_3606032_-	phospholipase	NA	NA	NA	NA
SPR48043.1\|3606028_3606889_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
SPR48044.1\|3607001_3608792_-\|tRNA	aspartate--tRNA ligase	A0A1V0SAC0	Catovirus	6.5e-08	25.5
SPR48045.1\|3608832_3609483_-	putative membrane protein	A0A2I7S9X1	Vibrio_phage	8.6e-11	28.4
SPR48046.1\|3609498_3609807_-	hypothetical protein	NA	NA	NA	NA
SPR48047.1\|3609972_3611259_-	membrane protein	NA	NA	NA	NA
SPR48048.1\|3611385_3612636_-	partial	A0A2I2L3D3	Orpheovirus	6.1e-13	27.6
SPR48049.1\|3612692_3613643_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48050.1\|3613741_3614692_-\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48051.1\|3614773_3616462_-	partial	NA	NA	NA	NA
SPR48052.1\|3616643_3617858_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
SPR48053.1\|3617963_3618953_+	conserved hypothetical protein	A0A2P0VNK5	Tetraselmis_virus	4.3e-38	37.7
SPR48054.1\|3618949_3619558_+	probable hydrolase	E3T535	Cafeteria_roenbergensis_virus	5.2e-10	26.1
SPR48055.1\|3619570_3620200_+	exported protein	NA	NA	NA	NA
3619612:3619629	attR	NA	NA	NA	NA
SPR48056.1\|3620196_3620817_+	exported protein	NA	NA	NA	NA
SPR48057.1\|3620848_3621640_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.5e-20	27.4
SPR48058.1\|3621993_3622215_+	partial	NA	NA	NA	NA
SPR48059.1\|3622482_3622947_+	nitrogen regulatory IIA protein	NA	NA	NA	NA
SPR48060.1\|3622965_3623892_+	HPr kinase/phosphorylase	NA	NA	NA	NA
SPR48061.1\|3623945_3625232_-	cytochrome C	NA	NA	NA	NA
SPR48062.1\|3625280_3626147_-	cytochrome C	NA	NA	NA	NA
SPR48063.1\|3626162_3627035_+	conserved hypothetical protein	A0A1P8D5W0	Corynebacterium_phage	2.4e-08	34.5
SPR48064.1\|3627031_3627982_+	lipoprotein	F5B3X9	Synechococcus_phage	6.9e-17	47.2
SPR48065.1\|3628080_3629031_+\|transposase	transposase IS481 family	NA	NA	NA	NA
SPR48066.1\|3629492_3629912_-	conserved hypothetical protein	NA	NA	NA	NA
SPR48067.1\|3629898_3632280_-	dehydrogenase/oxidase	NA	NA	NA	NA
SPR48068.1\|3632272_3633649_-	FAD binding domain in molybdopterin dehydrogenase	A0A0P0IVM8	Acinetobacter_phage	2.4e-18	37.3
SPR48069.1\|3633664_3634660_-	45-dihydroxyphthalate decarboxylase	NA	NA	NA	NA
SPR48070.1\|3634678_3635671_-	exported protein	NA	NA	NA	NA
SPR48071.1\|3635911_3636472_-	probable flavoprotein	NA	NA	NA	NA
SPR48072.1\|3636476_3636803_-	glutaredoxin	NA	NA	NA	NA
SPR48073.1\|3636839_3637652_-	release factor glutamine methyltransferase	NA	NA	NA	NA
SPR48074.1\|3637662_3638745_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	3.3e-07	40.7
SPR48075.1\|3638831_3640106_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
SPR48076.1\|3640828_3641779_-\|transposase	transposase IS481 family	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LS398590

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection