CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
LT906621	Lactobacillus fermentum strain IMDO 130101 genome assembly, chromosome: I	2 crisprs	cas14j,cas3,DEDDh,cas9,cas1,cas2,csn2,WYL,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,csa3	0	21	20	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: LT906621_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LT906621_2

848471-849827

TypeII

Consensus_repeat	Method
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	PILER-CR

20 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of LT906621_2

>merge|LT906621|2|848471-849827|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGTTTTGTTTTGCCAATAGCAACATCGGCCGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCGGCCGCAACTCACCATTAAAGTTGATTGTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTACAAGACTAACGATTGGGTCGGTCTTAGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACATCAAGAAGGGCCCGTCATATATGGTCCGGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAACTAATCATGTTAGGCGAAACTAGGGGGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAGTTCTCCGAATCCGTCTTCATTCTCCGTTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACATAATTTCTGCACATAGCATAAGCACCATCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCAAGAAGGTTAAGAATTCAGCTGAAAACGGGTCTTGGATGAGTGTCATATCAGTAGTTCCGAGTACCCAAAGGTCATTGTTAGTGGTTTCCGTTTGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTTGGTTACGACGCTTGGGGTGCAACGGTGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGGCGCCAAGTTTGTCTTTCCACGTCTTGAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCCTTCATTTAGCAAGATATTGAAAAACCATGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAGACATCTTAGGCGATGCAACGGTCATCACGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCCTGTTGATTCTTGATTGCTATCAGGGCGCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAAAGCGGCAATTGTCGCATTAGGAGGTAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTTACAACGCCAGTGATATTGCGGTTGATCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTCACAATTTACTCGACTAGCATCCGCTTAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACCCAACAAGTATCATAGGAATAACGCGGCTAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTCCTGTTTTGGCTAGTTCTCAAAACTTATATGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAATTGGAAAGTTGGTTTCGAAGATTCCAGGGTCTTGGATGAGTGTCAGATCAGGTCAAGTCCAAAA

>LT906621|2|1|848471-849430|PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTTTGTTTTGCCAATAGCAACATCGGCCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CGGCCGCAACTCACCATTAAAGTTGATTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TACAAGACTAACGATTGGGTCGGTCTTAGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCAAGAAGGGCCCGTCATATATGGTCCGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAACTAATCATGTTAGGCGAAACTAGGGGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTCTCCGAATCCGTCTTCATTCTCCGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATAATTTCTGCACATAGCATAAGCACCATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CAAGAAGGTTAAGAATTCAGCTGAAAACGG
GTCTTGGATGAGTGTCATATCAGTAGTTCCGAGTAC	CCAAAGGTCATTGTTAGTGGTTTCCGTTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTGGTTACGACGCTTGGGGTGCAACGGTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGCGCCAAGTTTGTCTTTCCACGTCTTGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTTCATTTAGCAAGATATTGAAAAACCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGACATCTTAGGCGATGCAACGGTCATCAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTGTTGATTCTTGATTGCTATCAGGGCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAAAGCGGCAATTGTCGCATTAGGAGGTAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTACAACGCCAGTGATATTGCGGTTGATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTCACAATTTACTCGACTAGCATCCGCTTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCAACAAGTATCATAGGAATAACGCGGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCCTGTTTTGGCTAGTTCTCAAAACTTATAT


>LT906621|2|1|848471-849761|CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTTTGTTTTGCCAATAGCAACATCGGCCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CGGCCGCAACTCACCATTAAAGTTGATTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TACAAGACTAACGATTGGGTCGGTCTTAGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCAAGAAGGGCCCGTCATATATGGTCCGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAACTAATCATGTTAGGCGAAACTAGGGGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTCTCCGAATCCGTCTTCATTCTCCGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATAATTTCTGCACATAGCATAAGCACCATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CAAGAAGGTTAAGAATTCAGCTGAAAACGG
GTCTTGGATGAGTGTCATATCAGTAGTTCCGAGTAC	CCAAAGGTCATTGTTAGTGGTTTCCGTTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTGGTTACGACGCTTGGGGTGCAACGGTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGCGCCAAGTTTGTCTTTCCACGTCTTGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTTCATTTAGCAAGATATTGAAAAACCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGACATCTTAGGCGATGCAACGGTCATCAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTGTTGATTCTTGATTGCTATCAGGGCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAAAGCGGCAATTGTCGCATTAGGAGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTACAACGCCAGTGATATTGCGGTTGATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTCACAATTTACTCGACTAGCATCCGCTTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCAACAAGTATCATAGGAATAACGCGGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCCTGTTTTGGCTAGTTCTCAAAACTTATAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC

>LT906621|2|2|848471-849827|CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTTTGTTTTGCCAATAGCAACATCGGCCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CGGCCGCAACTCACCATTAAAGTTGATTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TACAAGACTAACGATTGGGTCGGTCTTAGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCAAGAAGGGCCCGTCATATATGGTCCGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAACTAATCATGTTAGGCGAAACTAGGGGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTCTCCGAATCCGTCTTCATTCTCCGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATAATTTCTGCACATAGCATAAGCACCATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CAAGAAGGTTAAGAATTCAGCTGAAAACGG
GTCTTGGATGAGTGTCATATCAGTAGTTCCGAGTAC	CCAAAGGTCATTGTTAGTGGTTTCCGTTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTGGTTACGACGCTTGGGGTGCAACGGTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGCGCCAAGTTTGTCTTTCCACGTCTTGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTTCATTTAGCAAGATATTGAAAAACCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGACATCTTAGGCGATGCAACGGTCATCAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTGTTGATTCTTGATTGCTATCAGGGCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAAAGCGGCAATTGTCGCATTAGGAGGTAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTACAACGCCAGTGATATTGCGGTTGATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTCACAATTTACTCGACTAGCATCCGCTTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCAACAAGTATCATAGGAATAACGCGGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCCTGTTTTGGCTAGTTCTCAAAACTTATAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AATTGGAAAGTTGGTTTCGAAGATTCCAGG
GTCTTGGATGAGTGTCAGATCAGGTCAAGTCCAAAA

>LT906621|2|2|849461-849761|PILER-CR
	GTTTTGTTTTGCCAATAGCAACATCGGCCG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CGGCCGCAACTCACCATTAAAGTTGATTGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TACAAGACTAACGATTGGGTCGGTCTTAGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATCAAGAAGGGCCCGTCATATATGGTCCGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AAACTAATCATGTTAGGCGAAACTAGGGGG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTCTCCGAATCCGTCTTCATTCTCCGTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	ATAATTTCTGCACATAGCATAAGCACCATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CAAGAAGGTTAAGAATTCAGCTGAAAACGG
GTCTTGGATGAGTGTCATATCAGTAGTTCCGAGTAC	CCAAAGGTCATTGTTAGTGGTTTCCGTTTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTGGTTACGACGCTTGGGGTGCAACGGTG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GGCGCCAAGTTTGTCTTTCCACGTCTTGAG
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTTCATTTAGCAAGATATTGAAAAACCAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGACATCTTAGGCGATGCAACGGTCATCAC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCTGTTGATTCTTGATTGCTATCAGGGCGC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAAAAGCGGCAATTGTCGCATTAGGAGGTAGGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTTACAACGCCAGTGATATTGCGGTTGATC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTCACAATTTACTCGACTAGCATCCGCTTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CCAACAAGTATCATAGGAATAACGCGGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TCCTGTTTTGGCTAGTTCTCAAAACTTATAT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC

Protein	Signature genes	Signature genes Name	Protein_function
LT906621.1\|SNX31420.1\|837420_838062_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
LT906621.1\|SNX31427.1\|847770_848442_+\|Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
LT906621.1\|SNX31418.1\|836088_836532_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235075
LT906621.1\|SNX31434.1\|857135_857885_+\|ribosomal-RNA-small-subunit-methyltransferase-E	unknown	unknown	gnl\|CDD\|236959
LT906621.1\|SNX31432.1\|855800_856118_+\|hypothetical-protein	unknown	unknown	unknown
LT906621.1\|SNX31422.1\|838874_839660_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
LT906621.1\|SNX31437.1\|860545_860983_+\|D-aminoacyl-tRNA-deacylase	unknown	unknown	gnl\|CDD\|235383
LT906621.1\|SNX31428.1\|849857_851102_-\|transposase	unknown	unknown	gnl\|CDD\|307151
LT906621.1\|SNX31436.1\|858301_860536_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|223394
LT906621.1\|SNX31426.1\|847453_847774_+\|Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
LT906621.1\|SNX31429.1\|851374_853006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274709
LT906621.1\|SNX31419.1\|836546_837359_+\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
LT906621.1\|SNX31430.1\|853014_854175_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227829
LT906621.1\|SNX31435.1\|857953_858286_+\|hypothetical-protein	unknown	unknown	unknown
LT906621.1\|SNX31423.1\|840017_841976_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274774
LT906621.1\|SNX31421.1\|838075_838873_-\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
LT906621.1\|SNX31425.1\|846585_847491_+\|Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
LT906621.1\|SNX31433.1\|856173_857136_+\|ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
LT906621.1\|SNX31424.1\|842241_846378_+\|Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
LT906621.1\|SNX31431.1\|854361_855315_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836

Protein	Function_ID	Function_description	E-value
LT906621.1\|SNX31420.1\|837420_838062_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	1.92369e-70
LT906621.1\|SNX31427.1\|847770_848442_+\|Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	2.9478e-90
LT906621.1\|SNX31418.1\|836088_836532_+\|hypothetical-protein	gnl\|CDD\|235075	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional.	4.98724e-38
LT906621.1\|SNX31434.1\|857135_857885_+\|ribosomal-RNA-small-subunit-methyltransferase-E	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.20964e-73
LT906621.1\|SNX31422.1\|838874_839660_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	1.10926e-94
LT906621.1\|SNX31437.1\|860545_860983_+\|D-aminoacyl-tRNA-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	3.27289e-97
LT906621.1\|SNX31428.1\|849857_851102_-\|transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.88537e-128
LT906621.1\|SNX31436.1\|858301_860536_+\|GTP-pyrophosphokinase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
LT906621.1\|SNX31426.1\|847453_847774_+\|Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	3.4768e-28
LT906621.1\|SNX31429.1\|851374_853006_+\|hypothetical-protein	gnl\|CDD\|274709	TIGR03663, TIGR03663, TIGR03663 family protein. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.	2.38151e-05
LT906621.1\|SNX31419.1\|836546_837359_+\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	1.23967e-90
LT906621.1\|SNX31430.1\|853014_854175_+\|hypothetical-protein	gnl\|CDD\|227829	COG5542, COG5542, Predicted integral membrane protein [Function unknown].	3.75532e-11
LT906621.1\|SNX31423.1\|840017_841976_+\|hypothetical-protein	gnl\|CDD\|274774	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 (XrtG) is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.	3.78126e-17
LT906621.1\|SNX31421.1\|838075_838873_-\|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.13343e-122
LT906621.1\|SNX31425.1\|846585_847491_+\|Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.05184e-80
LT906621.1\|SNX31433.1\|856173_857136_+\|ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	7.50038e-101
LT906621.1\|SNX31424.1\|842241_846378_+\|Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	2.83665e-129
LT906621.1\|SNX31431.1\|854361_855315_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	3.62932e-180

>LT906621.1|SNX31427.1|847770_848442_+|Csn2
MKLQYHGHQPIEMTPGKVVILQIENPSVNTELIQGLQGYNDCLRMIDDEYQELNLSKVMKWEGDLVLNPTKLDSYQTALDKMIVKNLSIQKRDRMNDLARGVFSEMQDSLFEFDLPLEVRYDESLLRLYKYAKIKYLTQVIRQPYGIIETDLKLHLELKDCQVLGYCNVANYLLPEQIQEFATLVEKTELAVLLVEFSEKRETLQQLKQDIYRIDRDFVDWHE
>LT906621.1|SNX31426.1|847453_847774_+|Cas2
MRYRIMRLMVMFDLPTDTSQQRKQYRQFRKKLLNEGFIMIQYSVYVRVCTTRSAAEFLERRLKNYLPAQGIIQSLMLTEKQYSDMHFLLGDEIEEVRNSSKRTIVL
>LT906621.1|SNX31425.1|846585_847491_+|Cas1
MGWRSIIIGQHAKITHSAHMMVVQTKDGINEIPMDDIAKVLVETTQAMISSDFMSACLQRNIKVIFVDRKYQPIGETVGYQPVARDYELLERQFLWPLDRREQLWTRIAHAKIESQIKVARLNGCPVQELESELEAIEVNDISNREAVVARKYFPLLFGKDFSRRQENQYNAALDYGCAVLLAETNQSITENGYLMELGIHHQNRENRFNLGSDLMEPFRPVIDYWVTGQKFAEFNRQVRVGLVDAMHTVIKYNGTEMLTQNAVRQYVRECLDYLSCERDEIEVKVEFKDEVPNHALDGHV
>LT906621.1|SNX31424.1|842241_846378_+|Cas9
MKEYHIGLDIGTSSIGWAVTDSQFKLMRIKGKTAIGVRLFEEGKTAAERRTFRTTRRRLKRRKWRLHYLDEIFAPHLQEVDENFLRRLKQSNIHPEDPTKNQAFIGKLLFPDLLKKNERGYPTLIKMRDELPVEQRAHYPVMNIYKLREAMINEDRQFDLREVYLAVHHIVKYRGHFLNNASVDKFKVGRIDFDKSFNVLNEAYEELQNGEGSFTIEPSKVEKIGQLLLDTKMRKLDRQKAVAKLLEVKVADKEETKRNKQIATAMSKLVLGYKADFATVAMANGNEWKIDLSSETSEDEIEKFREELSDAQNDILTEITSLFSQIMLNEIVPNGMSISESMMDRYWTHERQLAEVKEYLATQPASARKEFDQVYNKYIGQAPKERGFDLEKGLKKILSKKENWKEIDELLKAGDFLPKQRTSANGVIPHQMHQQELDRIIEKQAKYYPWLATENPATGERDRHQAKYELDQLVSFRIPYYVGPLVTPEVQKATSGAKFAWAKRKEDGEITPWNLWDKIDRAESAEAFIKRMTVKDTYLLNEDVLPANSLLYQKYNVLNELNNVRVNGRRLSVGIKQDIYTELFKKKKTVKASDVASLVMAKTRGVNKPSVEGLSDPKKFNSNLATYLDLKSIVGDKVDDNRYQTDLENIIEWRSVFEDGEIFADKLTEVEWLTDEQRSALVKKRYKGWGRLSKKLLTGIVDENGQRIIDLMWNTDQNFKEIVDQPVFKEQIDQLNQKAITNDGMTLRERVESVLDDAYTSPQNKKAIWQVVRVVEDIVKAVGNAPKSISIEFARNEGNKGEITRSRRTQLQKLFEDQAHELVKDTSLTEELEKAPDLSDRYYFYFTQGGKDMYTGDPINFDEISTKYDIDHILPQSFVKDNSLDNRVLTSRKENNKKSDQVPAKLYAAKMKPYWNQLLKQGLITQRKFENLTKDVDQNIKYRSLGFVKRQLVETRQVIKLTANILGSMYQEAGTEIIETRAGLTKQLREEFDLPKVREVNDYHHAVDAYLTTFAGQYLNRRYPKLRSFFVYGEYMKFKHGSDLKLRNFNFFHELMEGDKSQGKVVDQQTGELITTRDEVAKSFDRLLNMKYMLVSKEVHDRSDQLYGATIVTAKESGKLTSPIEIKKNRLVDLYGAYTNGTSAFMTIIKFTGNKPKYKVIGIPTTSAASLKRAGKPGSESYNQELHRIIKSNPKVKKGFEIVVPHVSYGQLIVDGDCKFTLASPTVQHPATQLVLSKKSLETISSGYKILKDKPAIANERLIRVFDEVVGQMNRYFTIFDQRSNRQKVADARDKFLSLPTESKYEGAKKVQVGKTEVITNLLMGLHANATQGDLKVLGLATFGFFQSTTGLSLSEDTMIVYQSPTGLFERRICLKDI
>LT906621.1|SNX31423.1|840017_841976_+|hypothetical-protein
MTGARRVSRGLAWILVACLVGGLVSNFTFSQNGVTSLVLVPLTLLGWWGLPKLAPVIDRLTNRQVALLVGVGMAVMVLLQMAVLKWLPVTVYHDPLRVLDQATRMAIGHTSWKITYFWRYPQNVPIAYLLSLWLKLTMALGMGVNRGVHLLSMLLLDGMVLLGIDTAWRVSKKKHLVLGILAFGVLTPFAYTYYLQVFYTDLPVMFVLLYLLRTLVLWRHRNWWQKGLSGALLVLLAMLGQLTKANMIVIIPAMLLTALILWGRHRFKQSQLLVPMLLITLGVALSFPLSSTLDKAAHFTRQTDYEFPLTQWVTMGLNEKSNGVYNTKDAVANVKLKTKAARNAHNLKVIKQRLAKQNVGLIKLWLAKLMVLTNAGNIFHWYNGGMQEAPRSYLKAAPAFTGLVAISYQLATCLLFGFVIKRLLATRMTLKSANGQVALLVILTALGYLAFHVLLWEVEERYGEVLVPLSWLLVTLLPAADDQPITLKQVGSVFALGTVAVLVGAMTNLGVNSSGQTVTVAAQRSQLSTQYGAKPVDLAPGKQISQVVKINGAASDVSVQIHAKSHVTVTLVELKTGDEYVFKRHADEYDYQGNVPAGTYQFVIKNQTAVDQDVDIVHVPHYRMAPYPMDDQGTVHWDTSLIYWFRDVRSAN
>LT906621.1|SNX31422.1|838874_839660_-|hydroxyethylthiazole-kinase
MQNAIATIKETNPIVLTVANNVTPADVANGLNALGASPMMSQTPEEADDMVNIAQAAAINLGTLNPHQRGEMEAVMEAAKKYHKPTVLDPVACGATMYRLRVVTELLHQYHFTVIRGNAGEIATLAGVDWQSHGIDAGEGNTDLEKVARLAAEKLGSVIVLSGEVDIVTDGTRLARLPYGSPAFKTHVGTGDMLSSLIGAFLATNDDAFDAAVDAVTTFTLCGQAVEDQRPGNWYPGLLNNLDAVTDQQLAAWQEAFGKEA
>LT906621.1|SNX31421.1|838075_838873_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase
MTNEFPQALTIAGSDSGGGAGIQADLKTIQMRHVFATTVVVAVTAQNTLGVQDALALPTEMIDAQFASLADDFKIRAAKTGMLADVPTVQAVVRNLKQYDFGPLTVDPVMIAKGGAKLLADEAITTVKDELLPLATLVTPNLPEAEALTGLKAERPADMVKIGQALQKLGPKNVLVKGGHLGGDQAASDFVLMEDGTSFWMTSPRIDTVRTHGTGDTISACITAELAKGVGLEQAIRTAKGYVEATIRDTIQVGHGHGPLNHWAL
>LT906621.1|SNX31420.1|837420_838062_-|thiamine-phosphate-synthase
MLFKDEMLRCYLIGGSQDTHHDPDEFLTKVEAAMQAGITAFQYREKGTSTLSKAETLALGQQVRELATKYGVPLFVDDDLELAAAIKADGIHVGQKDQRIEEVLAAVGDQLMVGYSCNTAPQVAHANQLNVDYIGTGPVFPTISKDDAGSALGVDGLADFVEQSAHPVVAIGGISMDNAGATLTSGCAGLSMISMVLGADDVAGTVKKILELY
>LT906621.1|SNX31419.1|836546_837359_+|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase
MTQYVQALTIAGHDSDGSAGMPADLHAFFIDGVYGQGLLTAAVSGNSYGITQQQIMPTSFIKEQFKVLADDFAIKAAKTGMLANDDVINAVADSYDEAKFGPLVVDPVIITKHGVMLLEQSAYELFRERIIPLATVITPNFYEAQKLTELELKDDDQVQEAAAKLHALGAKNVVIKGQHIEGQTTPVRDFVSLADGKIFWLEEEYVPTDRVNGTGDTFSAIIAAELAKGHSVEAGVRLAKKVVHEAIANEIEVGHQFGPINHWAGQGAAN
>LT906621.1|SNX31418.1|836088_836532_+|hypothetical-protein
MVIEVSSQEWFQKIAHLLELVALVAVGLLGLALIVQLGMELLAVVKLALAPVSDPGFYDFLNEVTSFFIIFEFIVMVIEALRNHGHISITMLMGLGLTALLRHLLAASNSNGIETMVEVGAIVLLTVGLAIYRRFIHDPDENFEKRI
>LT906621.1|SNX31428.1|849857_851102_-|transposase
MKSEWNFIMPKVELNLGDDELKELLLGDRDKAMQSIMAKILDEILKSEATEQIKAKAYERSDERTNSRNGYRVRQLTTRVGSLELHVPKLRHGNFSTQLFKRYQRSEQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTVSALCSNLDDQVLDFNRRPLTQKYAFVYADAILFKVHRGHVVTSNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSNDCTSILALKDRKEVANRLKDLFNAPTYDQAIERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELRKRLRTNNTIERVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK
>LT906621.1|SNX31429.1|851374_853006_+|hypothetical-protein
MFVATLTLAALYVAFLVVIAGRPALAKRPRWFKVILALLLLVAIIARLYRYNAAMGIDYDEAMGGLNAWSLAKWGIDYFTLASHPVYLYAWGSGMNLLYPLLASPFVKFFGLSITVYRFPMVLLGVLSLLYLTAAMLKARWSNWRLVLVLAALALSPGMLNTSRWAVESNLFPALLTMVMATLLWWVTTKRARYFYLTNLLLVLGAYTYANNWLFLATFILGFWLIAWRRHLVGVRQLGLGFLIDFALAWPLALFLWVNYVSHRQLYVLRLTITRLAASRGASQLVVGHGQGLGAVIKNLGQTVAVLFTGYDGYLKNGLPGFGILTPVMVVLAIVGALLVFKAKPRTDFDALMLMMLGANLPTVLLISPNHTHLNALTVPALYFAGMALAKLSRVNWRVAGLVVIVVLFGTYAYTYLGPAHTALAAGQNETPLELQTMLTKADDNGAPIYLATNHQQAGGMYTVALFNHPVKPANFKQEAVKSGGGEFIHYYCYGRYHISAQLPKSLPTHAVLIVRRGASLQSAKQAGYHLVKAGCYYQYLER
>LT906621.1|SNX31430.1|853014_854175_+|hypothetical-protein
MVQLEKPKQKWAWSQVLGLIAITVALVAFRLTLFNVQSGDYLEYLRDWYERIRSLGGLAALHHQVGNYAVPYQFLIALFTYLPLRNLYLYKALSVTFDIVFAVYSAKLIHRVKPKLNFLVPYTLILALPTVILNSSAWGQADSIYTAWLMVALWYLMNHQNNRALIFFGVALAFKLQAILLLPFFFYVYWARRDYRHWYQFGWIPVTVYAMNLPGFLAGRSLLTPLTIYAGQTSDYKELALNIANFPKFLQLAFPAAALDHYELLKRGLMVLTCLILLAGFWYLRRLDLTPQRFLMVATWSFWTCTMFLPSMHDRYSYFVMVMLALVALLDCRMIGVALVSIGISTVLYLRYLLNADAAIDLLPLAIIQIINYCGFTVGTFLHSFR
>LT906621.1|SNX31431.1|854361_855315_-|L-lactate-dehydrogenase
MSKTHQKVVLIGDGAVGSSYAFAMVQQGLAQEFAIIDLNKKRTEGDALDLEDATPFTAPKLVYGADYDTCKDADLVVITAGAPQKPGETRLDLVDKNLKIIRSVVEPVVKSGFQGIFLVAANPVDILTYAVQKFSGFPRNKVVGSGTSLDSARLRVGLSKLFNVSPVDVNANMMAEHGDTEFAAFSSATIGGLPLYDLAEAKGVSKEELYKLEDDVRNKAYAIINSKGATFYGVATALMRISRAILRDENAVLPVGAPMSGEYGLKDIYIGTPAVINANGIAEVLEVPLDEREAKAMADSAKTLEEIAKNGMAKIQG
>LT906621.1|SNX31432.1|855800_856118_+|hypothetical-protein
MLNRTKQFMREHDLTYKKEYIRPMMTPEHVYVFRFGKHRLNNRVIIRYSHTWTGRVKINEIDVRMHHQHHPRIFKTEDDMLAYLAHHLEKREAKEATRVHAGEEE
>LT906621.1|SNX31433.1|856173_857136_+|ribosomal-protein-L11-methyltransferase
MNWTAIVVETSTEAVDAVSYILTDTGATGVKIDDAADYQKLKPGKYGPYGEIVDPSTLPHREEGAAVTGYYPPTTFVPEKIADIRQRVAKLADFGLNPAPARVAAEEIDNQDWATAWQKYYHPVRVTRELTIVPQWEEYTPATADEKLLVLDPGMAFGTGTHPTTQLMLQALTIALRGGESMIDVGTGSGVLSIAAKQLGAGEVWAYDIDDVAVKSAEKNLALNPVAKDVHTGVNSLLDGIHTQVDLVVANILAEIILPLVPQAFENLKPGGKFLTSGIINTRFETVKKAIETQGFVVDETMRIKDWYGIIAHKPAPEEA
>LT906621.1|SNX31434.1|857135_857885_+|ribosomal-RNA-small-subunit-methyltransferase-E
MQRYFVDQALTAHRRLNLPDDVSHHLITVMRAAAGTQVELVLADHHAYLATLLDPATAEVKVEQDLGGDSELPIEVTLACGLPKTKEKPELIVQKATELGAKRIIFFESARSVSHWNAQRQGKKVERLQKIANAAAEQSHRNQIPEVSYFKDLKSLLTAFSFDHRVVAWEESAKQGERAALATVFDQVTPGQSLLAIFGPEGGLTETEVETMTAAGVVACGLGPRILRTETAPLYLMAAVSYHFELAEH
>LT906621.1|SNX31435.1|857953_858286_+|hypothetical-protein
MKSLWQRADRRLWVLSILIGFVVTWLVNIVPFINKVERFAVFYLLLYGAFAIWTGFTLQNRRRCWQAFVFPVSFLLAAHLFGPKYSLYFAPAYLAVAYLAWSMVRANRNK
>LT906621.1|SNX31436.1|858301_860536_+|GTP-pyrophosphokinase
MSQTKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKRFSQIYDLLAIRVVVDSIKDCYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIGPEGRPLEIQIRTHQMHEVAEYGVAAHWAYKEGKTNGGDQASQDSKKLNVVKEILELRSESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEIGNHTTGSKVNGRIVPLNYEIKNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRTHDREENVIEGRRIMEQQLRDAGYEPAELMVSDKEEEIAGKLHYKTADDMYAALGFGDIAPIGLRNRFTEDIRKHKEEEKQNAAQKAILEGHKTLEQEPPTRQKVAKSSEGVVVEGVDNLLTRLSHCCSPVPGDAIVGYITKGRGVSVHRADCPNIKAAEKSGQRVVSVYWANPAGDKTNYNADIEVEGYNRNGLLNDIIRAINNNTRYLTSINGRVDHNKMATISATVGVRNFQHLQLIMDSLKNLPDVYVVKRVIH
>LT906621.1|SNX31437.1|860545_860983_+|D-aminoacyl-tRNA-deacylase
MRVVLQRVKEASVTIEGQVVGQIGQGYLLLVGFGPDDTEETLDYMVHKITNLRVFESEPGKMNLGLKDVDGAILSVSQFTLYADVKHGNRPGFSNAAKPSLAEPLYQRFNEKLAATGIPVATGQFGADMQVALVNDGPVTIWYEK

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Crispr_ID: LT906621_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

LT906621_3

1294238-1296954

TypeV,TypeI-E

Consensus_repeat	Method
GGATCACCCCCATATACATGGGGAGCAC	PILER-CR
GGATCACCCCCATATACATGGGGAGCAC	CRISPRCasFinder
GGATCACCCCCATATACATGGGGAGCAC	CRT
GGATCACCCCCATATACATGGGGAGCAC	PILER-CR

44 spacers

DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of LT906621_3

>merge|LT906621|3|1294238-1296954|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GGATCACCCCCATATACATTGGGAGCACTGGCGTAGTTCCACTAGCTTAGTAGCGGACTTAGGATCACCCCCATATACATGGGGAGCACTCACCAGGTTGTGGCTGTTGGATTGCCCGGCTGGGATCACCCCCATATACATGGGGAGCACTCAACACAAACTTCACGGATAGCTCAAGACATGGGATCACCCCCATATACATGGGGAGCACGTGGCGACGTCACCTACTAGAGTTTCCATATTAGGATCACCCCCATATACATGGGGAGCACATGGCTTTCCTCTGAATACATAGAATCATGCAAGGATCACCCCCATATACATGGGGAGCACTTCATCTTCTAGTAGCTTTGGATAGCCTCTGTAGGATCACCCCCATATAATACATGGGGAGCACCAATAAAGCCGGCTAACTAAAAGCTGGTGAATAGGATCACCCCCATATACATGGGGAGCACAGTACTTGATTCCAACGGCAGAGCTGGGAGTCAGGATCACCCCCATATACATGGGGAGCACTTTTTGTTCAGCTTGTCAATCCCGATTGAGTAAGGATCACCCCCATATACATGGGGAGCACGAGGTGCATAGATTGAGCGAACCATATATTAAGGGATCACCCCCATATACATGGGGAGCACCCCGGAGTTGCTGTCGTTCATCTGCTTCATAAAGGATCACCCCCATATACATGGGGAGCACTTGATCTTAGTGGCGGCGGTTTGTGACCTCCAGGGATCACCCCCATATACATGGGGAGCACCAATCGCCAAGCAAACTGCTAGCGAGGCTACTAGGATCACCCCCATATACATGGGGAGCACTTTAAGTAAGCATATCCGTCCTGCCAAACAGTAGGATCACCCCCATATACATGGGGAGCACCTCAGATCGCTAGAAAGCGTCGCGGGCAAGCAAGGATCACCCCCATATACATGGGGAGCACTCGTAACGAGGTTCTTGACACGTGGATGATCCAGGATCACCCCCATATACATGGGGAGCACCTTTTGGCCTGATTCAATCCAGGCATCGTTTAAGGATCACCCCCATATACATGGGGAGCACGCAGGCGGTTTTGCTGCAACGTTCTCATTCCCGGGATCACCCCCATATACATGGGGAGCACATAAGTCTGAGTATCAGCCATGCTTAATCGGTAGGATCACCCCCATATACATGGGGAGCACTCAAATGCCTTCACCTCCGTTTCGTTCCAAGTGGGATCACCCCCATATACATGGGGAGCACCATATTGCTAAAACGATCGGTGATACAGACTCAGGGATCACCCCCATATACATGGGGAGCACTTAAACATCGATCCCACGACTGGAAACTGGATCAGGATCACCCCCATATACATGGGGAGCACTGGCGGGCGAGATCGCAAAGAATACGTCTAATGGGATCACCCCCATATACATGGGGAGCACGGGTAATTGAGGCAATCCCACAGTCAGATATGAGGATCACCCCCATATACATGGGGAGCACCGGTAAAGTCGTTCCATCCCGGCTCAAGACGAAGGATCACCCCCATATACATGGGGAGCACTTGATCCCATAGCCCATCAAGACCACGTCATAGGGATCACCCCCATATACATGGGGAGCACATTATTGTCATTATTAAGCTCCAGTACCAGTTGGGATCACCCCCATATACATGGGGAGCACAGTCCGATCGTGATGCCGAAGTGCTTGTAGATGGGATCACCCCCATATACATGGGGAGCACGTGTATTCCATATCCTTAGAATTTTGTTGCATGGGATCACCCCCATATACATGGGGAGCACATTCTAACGTAGTACTTGACTTCGTTGTGCCGGGGATCACCCCCATATACATGGGGAGCACCTGGTACTCAAGCAACGTAACGATTAACCTTGAGGATCACCCCCATATACATGGGGAGCACCACCACCAGTAACGTCGATAGCATCCACTTTGGGGATCACCCCCATATACATGGGGAGCACGCTGGCGGTTTGCACGGCAACGGTAGCGTTTGAGGATCACCCCCATATACATGGGGAGCACCCAGAAGTTCCCGTTTTGCGTTGGCGAAATCTGGGATCACCCCCATATACATGGGGAGCACGACAAGGTGACCAGCAGTCATCGCTAGATATGAGGATCACCCCCATATACATGGGGAGCACCAAGTGCCATGAGAGGTGGCAATAAATTCTATGGGATCACCCCCATATACATGGGGAGCACTGAGACGTTCGGCGCATGGAAACAGATTACTGGGGATCACCCCCATATACATGGGGAGCACCGTATTGCTCAAGATTAGCCACCTCCTTCTCTGGGATCACCCCCATATACATGGGGAGCACCGGCGTTCCCCGATGCATCAGTAGTGATTGAGGGGATCACCCCCATATACATGGGGAGCACTTTTAACGGCTAACCCGGCTGACATAGTGGCGAGGATCACCCCCATATACATGGGGAGCACGCTAACTACTTACCAAAGGTAGGGGTTGAATGGGGATCACCCCCATATACATGGGGAGCACCGATAGTAAATGTTTTGGGTGGTTGTCAACGTGGGATCACCCCCATATACATGGGGAGCACCAATTAATGCTGATTTGAAAGTTGGAGATATAAGGATCACCCCCATATACATGGGGAGCACTTCGTAATCGTAAGCGACTGATTAGTTGTCTGGGGATCACCCCCATATACATGGGGAGCAC

>LT906621|3|3|1294238-1294509|PILER-CR
GGATCACCCCCATATACATTGGGAGCAC	TGGCGTAGTTCCACTAGCTTAGTAGCGGACTTA
GGATCACCCCCATATACATGGGGAGCAC	TCACCAGGTTGTGGCTGTTGGATTGCCCGGCTG
GGATCACCCCCATATACATGGGGAGCAC	TCAACACAAACTTCACGGATAGCTCAAGACATG
GGATCACCCCCATATACATGGGGAGCAC	GTGGCGACGTCACCTACTAGAGTTTCCATATTA
GGATCACCCCCATATACATGGGGAGCACATGGCTTTCCTCTGAATACATAGAATCATGCAAGGATCACCCCCATATACATGGGGAGCACTTCATCTTCTAGTAGCTTTGGATAGCCTCTGTAGGATCACCCCCATATAATACATGGGGAGCACCAATAAAGCCGGCTAACTAAAAGCTGGTGAATAGGATCACCCCCATATACATGGGGAGCAC	AGTACTTGATTCCAACGGCAGAGCTGGGAGTCA
GGATCACCCCCATATACATGGGGAGCAC	TTTTTGTTCAGCTTGTCAATCCCGATTGAGTAA
GGATCACCCCCATATACATGGGGAGCAC	GAGGTGCATAGATTGAGCGAACCATATATTAAG
GGATCACCCCCATATACATGGGGAGCAC	CCCGGAGTTGCTGTCGTTCATCTGCTTCATAAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCTTAGTGGCGGCGGTTTGTGACCTCCAG
GGATCACCCCCATATACATGGGGAGCAC	CAATCGCCAAGCAAACTGCTAGCGAGGCTACTA
GGATCACCCCCATATACATGGGGAGCAC	TTTAAGTAAGCATATCCGTCCTGCCAAACAGTA
GGATCACCCCCATATACATGGGGAGCAC	CTCAGATCGCTAGAAAGCGTCGCGGGCAAGCAA
GGATCACCCCCATATACATGGGGAGCAC	TCGTAACGAGGTTCTTGACACGTGGATGATCCA
GGATCACCCCCATATACATGGGGAGCAC	CTTTTGGCCTGATTCAATCCAGGCATCGTTTAA
GGATCACCCCCATATACATGGGGAGCAC	GCAGGCGGTTTTGCTGCAACGTTCTCATTCCCG
GGATCACCCCCATATACATGGGGAGCAC	ATAAGTCTGAGTATCAGCCATGCTTAATCGGTA
GGATCACCCCCATATACATGGGGAGCAC	TCAAATGCCTTCACCTCCGTTTCGTTCCAAGTG
GGATCACCCCCATATACATGGGGAGCAC	CATATTGCTAAAACGATCGGTGATACAGACTCAG
GGATCACCCCCATATACATGGGGAGCAC	TTAAACATCGATCCCACGACTGGAAACTGGATCA
GGATCACCCCCATATACATGGGGAGCAC	TGGCGGGCGAGATCGCAAAGAATACGTCTAATG
GGATCACCCCCATATACATGGGGAGCAC	GGGTAATTGAGGCAATCCCACAGTCAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CGGTAAAGTCGTTCCATCCCGGCTCAAGACGAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCCCATAGCCCATCAAGACCACGTCATAG
GGATCACCCCCATATACATGGGGAGCAC	ATTATTGTCATTATTAAGCTCCAGTACCAGTTG
GGATCACCCCCATATACATGGGGAGCAC	AGTCCGATCGTGATGCCGAAGTGCTTGTAGATG
GGATCACCCCCATATACATGGGGAGCAC	GTGTATTCCATATCCTTAGAATTTTGTTGCATG
GGATCACCCCCATATACATGGGGAGCAC	ATTCTAACGTAGTACTTGACTTCGTTGTGCCGG
GGATCACCCCCATATACATGGGGAGCAC	CTGGTACTCAAGCAACGTAACGATTAACCTTGA
GGATCACCCCCATATACATGGGGAGCAC	CACCACCAGTAACGTCGATAGCATCCACTTTGG
GGATCACCCCCATATACATGGGGAGCAC	GCTGGCGGTTTGCACGGCAACGGTAGCGTTTGA
GGATCACCCCCATATACATGGGGAGCAC	CCAGAAGTTCCCGTTTTGCGTTGGCGAAATCTG
GGATCACCCCCATATACATGGGGAGCAC	GACAAGGTGACCAGCAGTCATCGCTAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CAAGTGCCATGAGAGGTGGCAATAAATTCTATG
GGATCACCCCCATATACATGGGGAGCAC	TGAGACGTTCGGCGCATGGAAACAGATTACTGG
GGATCACCCCCATATACATGGGGAGCAC	CGTATTGCTCAAGATTAGCCACCTCCTTCTCTG
GGATCACCCCCATATACATGGGGAGCAC	CGGCGTTCCCCGATGCATCAGTAGTGATTGAGG
GGATCACCCCCATATACATGGGGAGCAC	TTTTAACGGCTAACCCGGCTGACATAGTGGCGA
GGATCACCCCCATATACATGGGGAGCAC	GCTAACTACTTACCAAAGGTAGGGGTTGAATGG
GGATCACCCCCATATACATGGGGAGCAC	CGATAGTAAATGTTTTGGGTGGTTGTCAACGTG
GGATCACCCCCATATACATGGGGAGCAC	CAATTAATGCTGATTTGAAAGTTGGAGATATAA
GGATCACCCCCATATACATGGGGAGCAC	TTCGTAATCGTAAGCGACTGATTAGTTGTCTGG


>LT906621|3|2|1294238-1296954|CRISPRCasFinder
GGATCACCCCCATATACATTGGGAGCAC	TGGCGTAGTTCCACTAGCTTAGTAGCGGACTTA
GGATCACCCCCATATACATGGGGAGCAC	TCACCAGGTTGTGGCTGTTGGATTGCCCGGCTG
GGATCACCCCCATATACATGGGGAGCAC	TCAACACAAACTTCACGGATAGCTCAAGACATG
GGATCACCCCCATATACATGGGGAGCAC	GTGGCGACGTCACCTACTAGAGTTTCCATATTA
GGATCACCCCCATATACATGGGGAGCAC	ATGGCTTTCCTCTGAATACATAGAATCATGCAA
GGATCACCCCCATATACATGGGGAGCAC	TTCATCTTCTAGTAGCTTTGGATAGCCTCTGTA
GGATCACCCCCATATAATACATGGGGAG	CACCAATAAAGCCGGCTAACTAAAAGCTGGTGAATA
GGATCACCCCCATATACATGGGGAGCAC	AGTACTTGATTCCAACGGCAGAGCTGGGAGTCA
GGATCACCCCCATATACATGGGGAGCAC	TTTTTGTTCAGCTTGTCAATCCCGATTGAGTAA
GGATCACCCCCATATACATGGGGAGCAC	GAGGTGCATAGATTGAGCGAACCATATATTAAG
GGATCACCCCCATATACATGGGGAGCAC	CCCGGAGTTGCTGTCGTTCATCTGCTTCATAAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCTTAGTGGCGGCGGTTTGTGACCTCCAG
GGATCACCCCCATATACATGGGGAGCAC	CAATCGCCAAGCAAACTGCTAGCGAGGCTACTA
GGATCACCCCCATATACATGGGGAGCAC	TTTAAGTAAGCATATCCGTCCTGCCAAACAGTA
GGATCACCCCCATATACATGGGGAGCAC	CTCAGATCGCTAGAAAGCGTCGCGGGCAAGCAA
GGATCACCCCCATATACATGGGGAGCAC	TCGTAACGAGGTTCTTGACACGTGGATGATCCA
GGATCACCCCCATATACATGGGGAGCAC	CTTTTGGCCTGATTCAATCCAGGCATCGTTTAA
GGATCACCCCCATATACATGGGGAGCAC	GCAGGCGGTTTTGCTGCAACGTTCTCATTCCCG
GGATCACCCCCATATACATGGGGAGCAC	ATAAGTCTGAGTATCAGCCATGCTTAATCGGTA
GGATCACCCCCATATACATGGGGAGCAC	TCAAATGCCTTCACCTCCGTTTCGTTCCAAGTG
GGATCACCCCCATATACATGGGGAGCAC	CATATTGCTAAAACGATCGGTGATACAGACTCAG
GGATCACCCCCATATACATGGGGAGCAC	TTAAACATCGATCCCACGACTGGAAACTGGATCA
GGATCACCCCCATATACATGGGGAGCAC	TGGCGGGCGAGATCGCAAAGAATACGTCTAATG
GGATCACCCCCATATACATGGGGAGCAC	GGGTAATTGAGGCAATCCCACAGTCAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CGGTAAAGTCGTTCCATCCCGGCTCAAGACGAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCCCATAGCCCATCAAGACCACGTCATAG
GGATCACCCCCATATACATGGGGAGCAC	ATTATTGTCATTATTAAGCTCCAGTACCAGTTG
GGATCACCCCCATATACATGGGGAGCAC	AGTCCGATCGTGATGCCGAAGTGCTTGTAGATG
GGATCACCCCCATATACATGGGGAGCAC	GTGTATTCCATATCCTTAGAATTTTGTTGCATG
GGATCACCCCCATATACATGGGGAGCAC	ATTCTAACGTAGTACTTGACTTCGTTGTGCCGG
GGATCACCCCCATATACATGGGGAGCAC	CTGGTACTCAAGCAACGTAACGATTAACCTTGA
GGATCACCCCCATATACATGGGGAGCAC	CACCACCAGTAACGTCGATAGCATCCACTTTGG
GGATCACCCCCATATACATGGGGAGCAC	GCTGGCGGTTTGCACGGCAACGGTAGCGTTTGA
GGATCACCCCCATATACATGGGGAGCAC	CCAGAAGTTCCCGTTTTGCGTTGGCGAAATCTG
GGATCACCCCCATATACATGGGGAGCAC	GACAAGGTGACCAGCAGTCATCGCTAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CAAGTGCCATGAGAGGTGGCAATAAATTCTATG
GGATCACCCCCATATACATGGGGAGCAC	TGAGACGTTCGGCGCATGGAAACAGATTACTGG
GGATCACCCCCATATACATGGGGAGCAC	CGTATTGCTCAAGATTAGCCACCTCCTTCTCTG
GGATCACCCCCATATACATGGGGAGCAC	CGGCGTTCCCCGATGCATCAGTAGTGATTGAGG
GGATCACCCCCATATACATGGGGAGCAC	TTTTAACGGCTAACCCGGCTGACATAGTGGCGA
GGATCACCCCCATATACATGGGGAGCAC	GCTAACTACTTACCAAAGGTAGGGGTTGAATGG
GGATCACCCCCATATACATGGGGAGCAC	CGATAGTAAATGTTTTGGGTGGTTGTCAACGTG
GGATCACCCCCATATACATGGGGAGCAC	CAATTAATGCTGATTTGAAAGTTGGAGATATAA
GGATCACCCCCATATACATGGGGAGCAC	TTCGTAATCGTAAGCGACTGATTAGTTGTCTGG
GGATCACCCCCATATACATGGGGAGCAC

>LT906621|3|3|1294238-1296954|CRT
GGATCACCCCCATATACATTGGGAGCAC	TGGCGTAGTTCCACTAGCTTAGTAGCGGACTTA
GGATCACCCCCATATACATGGGGAGCAC	TCACCAGGTTGTGGCTGTTGGATTGCCCGGCTG
GGATCACCCCCATATACATGGGGAGCAC	TCAACACAAACTTCACGGATAGCTCAAGACATG
GGATCACCCCCATATACATGGGGAGCAC	GTGGCGACGTCACCTACTAGAGTTTCCATATTA
GGATCACCCCCATATACATGGGGAGCAC	ATGGCTTTCCTCTGAATACATAGAATCATGCAA
GGATCACCCCCATATACATGGGGAGCAC	TTCATCTTCTAGTAGCTTTGGATAGCCTCTGTA
GGATCACCCCCATATAATACATGGGGAG	CACCAATAAAGCCGGCTAACTAAAAGCTGGTGAATA
GGATCACCCCCATATACATGGGGAGCAC	AGTACTTGATTCCAACGGCAGAGCTGGGAGTCA
GGATCACCCCCATATACATGGGGAGCAC	TTTTTGTTCAGCTTGTCAATCCCGATTGAGTAA
GGATCACCCCCATATACATGGGGAGCAC	GAGGTGCATAGATTGAGCGAACCATATATTAAG
GGATCACCCCCATATACATGGGGAGCAC	CCCGGAGTTGCTGTCGTTCATCTGCTTCATAAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCTTAGTGGCGGCGGTTTGTGACCTCCAG
GGATCACCCCCATATACATGGGGAGCAC	CAATCGCCAAGCAAACTGCTAGCGAGGCTACTA
GGATCACCCCCATATACATGGGGAGCAC	TTTAAGTAAGCATATCCGTCCTGCCAAACAGTA
GGATCACCCCCATATACATGGGGAGCAC	CTCAGATCGCTAGAAAGCGTCGCGGGCAAGCAA
GGATCACCCCCATATACATGGGGAGCAC	TCGTAACGAGGTTCTTGACACGTGGATGATCCA
GGATCACCCCCATATACATGGGGAGCAC	CTTTTGGCCTGATTCAATCCAGGCATCGTTTAA
GGATCACCCCCATATACATGGGGAGCAC	GCAGGCGGTTTTGCTGCAACGTTCTCATTCCCG
GGATCACCCCCATATACATGGGGAGCAC	ATAAGTCTGAGTATCAGCCATGCTTAATCGGTA
GGATCACCCCCATATACATGGGGAGCAC	TCAAATGCCTTCACCTCCGTTTCGTTCCAAGTG
GGATCACCCCCATATACATGGGGAGCAC	CATATTGCTAAAACGATCGGTGATACAGACTCAG
GGATCACCCCCATATACATGGGGAGCAC	TTAAACATCGATCCCACGACTGGAAACTGGATCA
GGATCACCCCCATATACATGGGGAGCAC	TGGCGGGCGAGATCGCAAAGAATACGTCTAATG
GGATCACCCCCATATACATGGGGAGCAC	GGGTAATTGAGGCAATCCCACAGTCAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CGGTAAAGTCGTTCCATCCCGGCTCAAGACGAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCCCATAGCCCATCAAGACCACGTCATAG
GGATCACCCCCATATACATGGGGAGCAC	ATTATTGTCATTATTAAGCTCCAGTACCAGTTG
GGATCACCCCCATATACATGGGGAGCAC	AGTCCGATCGTGATGCCGAAGTGCTTGTAGATG
GGATCACCCCCATATACATGGGGAGCAC	GTGTATTCCATATCCTTAGAATTTTGTTGCATG
GGATCACCCCCATATACATGGGGAGCAC	ATTCTAACGTAGTACTTGACTTCGTTGTGCCGG
GGATCACCCCCATATACATGGGGAGCAC	CTGGTACTCAAGCAACGTAACGATTAACCTTGA
GGATCACCCCCATATACATGGGGAGCAC	CACCACCAGTAACGTCGATAGCATCCACTTTGG
GGATCACCCCCATATACATGGGGAGCAC	GCTGGCGGTTTGCACGGCAACGGTAGCGTTTGA
GGATCACCCCCATATACATGGGGAGCAC	CCAGAAGTTCCCGTTTTGCGTTGGCGAAATCTG
GGATCACCCCCATATACATGGGGAGCAC	GACAAGGTGACCAGCAGTCATCGCTAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CAAGTGCCATGAGAGGTGGCAATAAATTCTATG
GGATCACCCCCATATACATGGGGAGCAC	TGAGACGTTCGGCGCATGGAAACAGATTACTGG
GGATCACCCCCATATACATGGGGAGCAC	CGTATTGCTCAAGATTAGCCACCTCCTTCTCTG
GGATCACCCCCATATACATGGGGAGCAC	CGGCGTTCCCCGATGCATCAGTAGTGATTGAGG
GGATCACCCCCATATACATGGGGAGCAC	TTTTAACGGCTAACCCGGCTGACATAGTGGCGA
GGATCACCCCCATATACATGGGGAGCAC	GCTAACTACTTACCAAAGGTAGGGGTTGAATGG
GGATCACCCCCATATACATGGGGAGCAC	CGATAGTAAATGTTTTGGGTGGTTGTCAACGTG
GGATCACCCCCATATACATGGGGAGCAC	CAATTAATGCTGATTTGAAAGTTGGAGATATAA
GGATCACCCCCATATACATGGGGAGCAC	TTCGTAATCGTAAGCGACTGATTAGTTGTCTGG
GGATCACCCCCATATACATGGGGAGCAC

>LT906621|3|4|1294668-1296954|PILER-CR
	TGGCGTAGTTCCACTAGCTTAGTAGCGGACTTA
GGATCACCCCCATATACATGGGGAGCAC	TCACCAGGTTGTGGCTGTTGGATTGCCCGGCTG
GGATCACCCCCATATACATGGGGAGCAC	TCAACACAAACTTCACGGATAGCTCAAGACATG
GGATCACCCCCATATACATGGGGAGCAC	GTGGCGACGTCACCTACTAGAGTTTCCATATTA
GGATCACCCCCATATACATGGGGAGCACATGGCTTTCCTCTGAATACATAGAATCATGCAAGGATCACCCCCATATACATGGGGAGCACTTCATCTTCTAGTAGCTTTGGATAGCCTCTGTAGGATCACCCCCATATAATACATGGGGAGCACCAATAAAGCCGGCTAACTAAAAGCTGGTGAATAGGATCACCCCCATATACATGGGGAGCAC	AGTACTTGATTCCAACGGCAGAGCTGGGAGTCA
GGATCACCCCCATATACATGGGGAGCAC	TTTTTGTTCAGCTTGTCAATCCCGATTGAGTAA
GGATCACCCCCATATACATGGGGAGCAC	GAGGTGCATAGATTGAGCGAACCATATATTAAG
GGATCACCCCCATATACATGGGGAGCAC	CCCGGAGTTGCTGTCGTTCATCTGCTTCATAAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCTTAGTGGCGGCGGTTTGTGACCTCCAG
GGATCACCCCCATATACATGGGGAGCAC	CAATCGCCAAGCAAACTGCTAGCGAGGCTACTA
GGATCACCCCCATATACATGGGGAGCAC	TTTAAGTAAGCATATCCGTCCTGCCAAACAGTA
GGATCACCCCCATATACATGGGGAGCAC	CTCAGATCGCTAGAAAGCGTCGCGGGCAAGCAA
GGATCACCCCCATATACATGGGGAGCAC	TCGTAACGAGGTTCTTGACACGTGGATGATCCA
GGATCACCCCCATATACATGGGGAGCAC	CTTTTGGCCTGATTCAATCCAGGCATCGTTTAA
GGATCACCCCCATATACATGGGGAGCAC	GCAGGCGGTTTTGCTGCAACGTTCTCATTCCCG
GGATCACCCCCATATACATGGGGAGCAC	ATAAGTCTGAGTATCAGCCATGCTTAATCGGTA
GGATCACCCCCATATACATGGGGAGCAC	TCAAATGCCTTCACCTCCGTTTCGTTCCAAGTG
GGATCACCCCCATATACATGGGGAGCAC	CATATTGCTAAAACGATCGGTGATACAGACTCAG
GGATCACCCCCATATACATGGGGAGCAC	TTAAACATCGATCCCACGACTGGAAACTGGATCA
GGATCACCCCCATATACATGGGGAGCAC	TGGCGGGCGAGATCGCAAAGAATACGTCTAATG
GGATCACCCCCATATACATGGGGAGCAC	GGGTAATTGAGGCAATCCCACAGTCAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CGGTAAAGTCGTTCCATCCCGGCTCAAGACGAA
GGATCACCCCCATATACATGGGGAGCAC	TTGATCCCATAGCCCATCAAGACCACGTCATAG
GGATCACCCCCATATACATGGGGAGCAC	ATTATTGTCATTATTAAGCTCCAGTACCAGTTG
GGATCACCCCCATATACATGGGGAGCAC	AGTCCGATCGTGATGCCGAAGTGCTTGTAGATG
GGATCACCCCCATATACATGGGGAGCAC	GTGTATTCCATATCCTTAGAATTTTGTTGCATG
GGATCACCCCCATATACATGGGGAGCAC	ATTCTAACGTAGTACTTGACTTCGTTGTGCCGG
GGATCACCCCCATATACATGGGGAGCAC	CTGGTACTCAAGCAACGTAACGATTAACCTTGA
GGATCACCCCCATATACATGGGGAGCAC	CACCACCAGTAACGTCGATAGCATCCACTTTGG
GGATCACCCCCATATACATGGGGAGCAC	GCTGGCGGTTTGCACGGCAACGGTAGCGTTTGA
GGATCACCCCCATATACATGGGGAGCAC	CCAGAAGTTCCCGTTTTGCGTTGGCGAAATCTG
GGATCACCCCCATATACATGGGGAGCAC	GACAAGGTGACCAGCAGTCATCGCTAGATATGA
GGATCACCCCCATATACATGGGGAGCAC	CAAGTGCCATGAGAGGTGGCAATAAATTCTATG
GGATCACCCCCATATACATGGGGAGCAC	TGAGACGTTCGGCGCATGGAAACAGATTACTGG
GGATCACCCCCATATACATGGGGAGCAC	CGTATTGCTCAAGATTAGCCACCTCCTTCTCTG
GGATCACCCCCATATACATGGGGAGCAC	CGGCGTTCCCCGATGCATCAGTAGTGATTGAGG
GGATCACCCCCATATACATGGGGAGCAC	TTTTAACGGCTAACCCGGCTGACATAGTGGCGA
GGATCACCCCCATATACATGGGGAGCAC	GCTAACTACTTACCAAAGGTAGGGGTTGAATGG
GGATCACCCCCATATACATGGGGAGCAC	CGATAGTAAATGTTTTGGGTGGTTGTCAACGTG
GGATCACCCCCATATACATGGGGAGCAC	CAATTAATGCTGATTTGAAAGTTGGAGATATAA
GGATCACCCCCATATACATGGGGAGCAC	TTCGTAATCGTAAGCGACTGATTAGTTGTCTGG
GGATCACCCCCATATACATGGGGAGCAC

Protein	Signature genes	Signature genes Name	Protein_function
LT906621.1\|SNX31845.1\|1296983_1297862_-\|Cas2-DEDDh-exonuclease-fusion-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
LT906621.1\|SNX31835.1\|1281556_1282435_-\|transposase	unknown	unknown	gnl\|CDD\|222853
LT906621.1\|SNX31839.1\|1285482_1288662_-\|carbamoyl-phosphate-synthase-large-chain	unknown	unknown	gnl\|CDD\|235393
LT906621.1\|SNX31840.1\|1288661_1289744_-\|carbamoyl-phosphate-synthase-small-chain	unknown	unknown	gnl\|CDD\|237139
LT906621.1\|SNX31841.1\|1289745_1291035_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
LT906621.1\|SNX31853.1\|1306495_1306855_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
LT906621.1\|SNX31837.1\|1283163_1284303_-\|putative-transposase	unknown	unknown	gnl\|CDD\|225382
LT906621.1\|SNX31836.1\|1282458_1282746_-\|putative-transposase	unknown	unknown	gnl\|CDD\|225511
LT906621.1\|SNX31846.1\|1297865_1298804_-\|Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
LT906621.1\|SNX31849.1\|1300157_1301264_-\|Cas7	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
LT906621.1\|SNX31850.1\|1301275_1301860_-\|Cse2	cse2gr11	mkCas0194_cse2gr11_CAS-I-E	gnl\|CDD\|378191
LT906621.1\|SNX31848.1\|1299469_1300180_-\|Cas5	cas5	cd09756_cas5_CAS-I-E	gnl\|CDD\|187886
LT906621.1\|SNX31851.1\|1301876_1303547_-\|Cse1	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|378189
LT906621.1\|SNX31838.1\|1284552_1285470_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit	unknown	unknown	gnl\|CDD\|235982
LT906621.1\|SNX31854.1\|1306975_1308403_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
LT906621.1\|SNX31852.1\|1303521_1306266_-\|Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
LT906621.1\|SNX31844.1\|1293237_1294206_+\|transposase	unknown	unknown	gnl\|CDD\|225382
LT906621.1\|SNX31847.1\|1298800_1299457_-\|Cas6e	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|378050
LT906621.1\|SNX31843.1\|1292334_1293129_-\|UPF0317-protein	unknown	unknown	gnl\|CDD\|180100
LT906621.1\|SNX31842.1\|1291034_1292000_-\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234849

Protein	Function_ID	Function_description	E-value
LT906621.1\|SNX31845.1\|1296983_1297862_-\|Cas2-DEDDh-exonuclease-fusion-protein	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	5.81153e-40
LT906621.1\|SNX31835.1\|1281556_1282435_-\|transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.386e-62
LT906621.1\|SNX31839.1\|1285482_1288662_-\|carbamoyl-phosphate-synthase-large-chain	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
LT906621.1\|SNX31840.1\|1288661_1289744_-\|carbamoyl-phosphate-synthase-small-chain	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
LT906621.1\|SNX31841.1\|1289745_1291035_-\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	0
LT906621.1\|SNX31853.1\|1306495_1306855_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	9.14881e-68
LT906621.1\|SNX31837.1\|1283163_1284303_-\|putative-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	5.71217e-64
LT906621.1\|SNX31836.1\|1282458_1282746_-\|putative-transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.28825e-07
LT906621.1\|SNX31846.1\|1297865_1298804_-\|Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.51665e-132
LT906621.1\|SNX31849.1\|1300157_1301264_-\|Cas7	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.12625e-142
LT906621.1\|SNX31850.1\|1301275_1301860_-\|Cse2	gnl\|CDD\|378191	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family of proteins, represented by CT1973 from Chlorobaculum tepidum, is encoded by genes found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse2.	1.28813e-24
LT906621.1\|SNX31848.1\|1299469_1300180_-\|Cas5	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.2928e-51
LT906621.1\|SNX31851.1\|1301876_1303547_-\|Cse1	gnl\|CDD\|378189	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This entry, represented by CT1972 from Chlorobaculum tepidum, is found in the CRISPR/Cas subtype Ecoli regions of many bacteria (most of which are mesophiles), and not in Archaea. It is designated Cse1.	7.47257e-81
LT906621.1\|SNX31838.1\|1284552_1285470_-\|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	2.00285e-160
LT906621.1\|SNX31854.1\|1306975_1308403_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.50194e-77
LT906621.1\|SNX31852.1\|1303521_1306266_-\|Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.90178e-85
LT906621.1\|SNX31844.1\|1293237_1294206_+\|transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.124e-48
LT906621.1\|SNX31847.1\|1298800_1299457_-\|Cas6e	gnl\|CDD\|378050	pfam08798, CRISPR_assoc, CRISPR associated protein. This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.95834e-76
LT906621.1\|SNX31843.1\|1292334_1293129_-\|UPF0317-protein	gnl\|CDD\|180100	PRK05463, PRK05463, putative hydro-lyase.	1.91766e-171
LT906621.1\|SNX31842.1\|1291034_1292000_-\|aspartate-carbamoyltransferase	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	1.71994e-158

>LT906621.1|SNX31844.1|1293237_1294206_+|transposase
MTYSHLTTAELTTIANFFTQGTKAYKVAQMLKRSVETIYRVYRYLKTGATIVDYQQQYVSNKKRCGRKLAQLPQDEVVYINEMVAQGWTPDTIIGRGDRSISCNRRTLYRMFKRGQFGFDAKDLPMHGNRHPNGYVEHRGKAGQLGRSIYERYEDFPNYTKEFGHLEGDTVQGKHHQGAVMTLVEHLSKVEIVLNVHAKKAENINRHLSEWLSKFPRHFFKLITFDNGKEFAGWREIANQFDIHTYFAEVGAPNQRGLNENNNGLLRRDGLTKDRDLRNLPDELVNQLMSKRNRIPRKSLDYRTPYEVFMEHITEDQRQLFF
>LT906621.1|SNX31843.1|1292334_1293129_-|UPF0317-protein
MTNLTNLSPAEFRRLVRTGDFTSPTSGYCPGYTQANLVIVPQRYAYDFLLLAQRNPRPCPVLEVSDAGSRGLTNFATDVDLANDFPKYRVYRGGELSEEVTSVERLWQNDFVSFLIGCSFSFEAELLAAGIEVRHITEEVNVPMYNTNLPLQGAGALHGNMVVSMRPIPASQVAKAVEVTAALPRVHGAPIHVGDPASLGIKDLSHPDYGDPVTIKDGELPVFWPCGVTPQNAIMQSKLPLVITHAPGHMLITDVLNANLKGNG
>LT906621.1|SNX31842.1|1291034_1292000_-|aspartate-carbamoyltransferase
MTTQLVEQLVSLPHFVSVEDLTTDQVNALIARAEEFKNGAPVPELSRPVYVTNMFFENSTRTHTSFAMAEKKLGLTEIPFDASHSSIKKGETLYDTCLTLDALGVDLTVIRASENDYYLPLINPGEGHYLDLGIVNGGDGSGQHPSQCMLDIMTIHEHFGHFKGLKVAIVGDITHSRVARSNMEILNKLGAEVYFSGPEYWYDHAFDKYGKFLPIDELVEEVDVMMLLRVQHERHAGDAHEGDFSAADYHKQYGINEERYALLKPDTIIMHPGPINRGVELADSLVEAPKSAFVAQMKNGVFMRMAMLEAVLRGRKLGGLE
>LT906621.1|SNX31841.1|1289745_1291035_-|dihydroorotase
MKTLIKNGTVYNDGRLVKEDVLVEDGIIRAIGKDLHEYLDDDYDELDAGNLLVSPGLVDVHVHYREPGQTEKETIKTGSAAAAHGGFTTVGAMPNVDPIPDTPAKVAQMVAKNKQDGLVHIAQYSAITTDRTSDEVVDMAGVKRAGAFAVSNDGNGVQAAGTMYRAMQAAKAVGLPLAAHVEDESLLFGGVMTEGERSRYLGLPGAPEVVESAQVARDLALAKATGVHYHVCHVSTKDSLAMIHFAKQNGVRVTCEATPHHLLLSDQCIDGHDSNYKMNPPLRHEADRRALVAALNDGTVDMIATDHAPHTEEDKGRDFCCAANGITGSETAFALLYTKLVKTGLLKLERLLDLMATNPAEVFNLTEAGHLEVGKPADIAVFDLNHPYVIDQRDYLSKGINSPFTGMTVYGQTVMTMVDGQVVYQRKEN
>LT906621.1|SNX31840.1|1288661_1289744_-|carbamoyl-phosphate-synthase-small-chain
MQRYLVLEDGTTYRGTAFGADQAKTGEVVFTTGMTGYQEAITDQSFANQILVFTNPLIGNYGVNLDDDESLLPEIKGVVCRKLARVATNWRMQDDLANFLTQRGIPGLEGIDTRALVKKLRQHGTLRGRLVDDLTDLDQVVAALKQATPMKNIIPLVSTKSPYPNPGTKRNIVVVDFGIKHSILRELAKRDCNVIVLPHTATATQVLNLHADGVFLSNGPGDPMEMTAAAEMVKEVEQHLPVFGICMGHQILALANGAKTVKMKFGHRGFNHPVKNVATGEVNFTSQNHGYAVDAASIDPDRLLITHVEINDGTVEGLRHKHYPAFSVQFHPDAAPGPHDAEQLFDDFINLVDQRKKGRN
>LT906621.1|SNX31839.1|1285482_1288662_-|carbamoyl-phosphate-synthase-large-chain
MPKRTDIHKIMVIGSGPIIIGQAAEFDYSGTQACLALKEEGYETVLVNSNPATIMTDKEIADHVYIEPLTVATLTRILRQEAPDALLPTLGGQIGLNLAVALSKTGILDELGIELLGTKLASIDQAEDREKFKELMQELGEPVPASLTVSTVEQALAFAKTVGYPVIVRPAFTMGGTGGGLANNEAELAEIAKNGLELSPATQCLIEKSIAGYKEIEFEVMRDAADNTMVVCCMENFDPVGIHTGDSIVFAPSQTLADREYQRLRDCALKLISALKIEGGCNVQLALDPNSYDYNVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEIKNPVTKTTYAEFEPALDYVVVKIPRWPFDKFTKADRRLGSQMKATGEVMAIGRTAEEALLKAVASLEIDQKDLFSKEAAAASDRQLEDKLVHAQDDRLFYIAEAFRRGYSLADLHELTRINHYFLDIVAGLVEEEGRIKAAGLDKEVIYEAKRDGFADTTLATLLNQTPAAIRAFRKANGIVPVYKMVDTCAAEFDSATPYFYSTYETENESRRSAKPSVLVIGSGPIRIGQGVEFDYATVHCVRALQKLGYEAIVINSNPETVSTDFSVSDKLYFEPLTLENVLNVTDLEQPVGAIVQFGGQTAINLAAGLEENGVKILGTTVADLDAAEDRELFDQVIKDLNLRQPIGMTATTCQGVLDAAKEIGYPVLVRPSYVLGGKAMEIVYGQAELEDYLNQNADVTGSHPILVDAYLEGAECEVDAICDGERVLLPGIMEHIEHAGVHSGDSMAVYPPQSFSGAVKVQIEEATKKLAVALKCVGIMNIQFIIHDGQAYVLEVNPRASRTVPFLSKVTGIEMAQLATKVILGHNLVKQGYRSGLAPESQMIHVKAPVFSFSKLGDVDSYLGPEMKSTGEVMGSDTTYEKALYKAFAGAGMEVPDNGAVLLTIEDNDKAQILPLAKRFLAIGYRILATSGTAAFLRENGLRPTVVAKLHEQGQPAILDVIKDKRADLVINTMGHDDEKNSDGFIIRQTAIEHHVPLLTTLDTVDALLRSLEMTSFKTTEL
>LT906621.1|SNX31838.1|1284552_1285470_-|dihydroorotate-dehydrogenase-B-(NAD(+)),-catalytic-subunit
MTNRLAVSLPGLNMTNPLMPASGTFGFGDAWGADQVNFNDLGALVIKTTTPEARTGNPQPQIAKLTDGVMNAVGLTNPGVDAVIKDKLPNLAKQYPDLPVVGSIGGSTETDYVLVAEKLAKSGLVSALELNVSCPNVAHGGMAFGTDAKVLESLTNQVKRVVGEVPLYVKLTPNVTDITEVARGAEAGGADGLSLINTVLGLHIDIRTGQPVLGNGMGGYSGTAVKPLAVRMVYQVAHATKLPIIGMGGIETAADVLEFMMAGASAVAVGAAHFKDIAACPHIAAQLPALMDELGIKTLAEVKRV
>LT906621.1|SNX31837.1|1283163_1284303_-|putative-transposase
MTHLNDITTDTNVSTRSKGSHLTIDDRVKISVLKELEYSNRMIAQYIGVAHGTIDREIKRGMVTKMSKQSNNGKVYCYYKEYYDPYTAQERYEKSRSNCGRTPIYQSSPEIINLLDDLMLGEFDFKDHDKFESLDSQKCSPYAALKIAESLVNDDVKLPASERSIYNWIDKGLLRTKNIDLLEKTRRTKAKHGRTPKREQPGKNISQRPKEVKTCTTLGHWEMDTVQGKKSAEDPVILVLAERLTRYNLAFKITSKTPNAVSRVITKLKELTGDYFDEIFKTITPDNGSEFFEVANEVDQVYYADAYSPWQRGTNENNNRLLRRSITKGTSLQLFSEFDVEQANLRLNSYPRKILGGKSSLDRFEEEILKIIDPETLAV
>LT906621.1|SNX31836.1|1282458_1282746_-|putative-transposase
MTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
>LT906621.1|SNX31835.1|1281556_1282435_-|transposase
MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
>LT906621.1|SNX31845.1|1296983_1297862_-|Cas2-DEDDh-exonuclease-fusion-protein
MIVIALSRVPASLRGDLTKWCQEIQTGIYVGRFSARIRDLLWERIQKNIGNGEATIVYTTNNELGYAFRSTREDREVVNYDGIPLLMHLEKPPSDIKHGFSDAAKFHHAKQARKGKETGMTRTVVALDIETTGLNSATDEIISIGAVKSTKGRGLERFYRIVRTSKQIPPKIVKLTGLNQRKVNQEGISLEAALTDFKDFIGHATVVGYNVAFDWEFIERGYDKIGQDRLGNRIIDLLKVVRQKEVFLDNFRFETVLKYYQIENHDQHNSLADAEALIKLMTKLIEKGFLKI
>LT906621.1|SNX31846.1|1297865_1298804_-|Cas1
MKSGIGAEKPKLTELSRTSDRISFLYLEHAKINRQDSAIKVMDARGIVFVPVALISVLLLGPGVDVTHRAMELMGDSGLAVVWVGEYGVRQYAHGRALNHSSRLLEKQAKLVSNVRSRVAVARKMYQMRFPNEDVTKLTMQQLRGKEGSRVRKVYRKLSNETGVAWNGREYNVDNFDEGTPINKALTAANQTLYGLSYSVVAALGASPGLGFIHTGHDLAFIYDFADIYKANYSIPISFEMTAKYGDEDIATRTRQAMRDAFRDGKLLKQMVHDLKFLFEVEDDQDLEFMSLWDDKEGMQKFGVQYHEIGEE
>LT906621.1|SNX31847.1|1298800_1299457_-|Cas6e
MYLSRVEVDTKNRQKISDLTHLGAYHSWVEDSFPREVVKGERKRHLWRLDQVQGKEYLLVLSDDQPNMNRLEKYGVPGSAQSKIYDQFLSQIQTGKVMRFRLTANPVHRVTEPGEKVGRVYPHVTIAQQEKWLIDRAERNGFTLLTTADGYQFDVVGRDRPQLLHKGQRRVKLNRVSYEGLLKVSDADLFKKLLVNGIGKEKAYGMGLMTVIPVNEKA
>LT906621.1|SNX31848.1|1299469_1300180_-|Cas5
MMKTLTVNLTGPLQSYGNEATFERRTTYHYPSKSAVIGMIAAGLGYRRDDQRIESLNKLGIAVRIDQRGKIMTDFHTVRPQNAKNSKLTYRDYLQDAVFVVAIGSEDDNLIGQIKYALRHPKFQLFLGRRANVPAGVLRIEEFDTDPMTVLKELPWQASDWFKKRMKKELYSAEVVADWGLEKGADRNLIRVKDKVGSFNVQHRYHKYRPAIRTFVTLKNYMYQENSGEHDVWSSI
>LT906621.1|SNX31849.1|1300157_1301264_-|Cas7
MKNLYLDINVLQTVPSSNINRDDTGTPKTAIYGGVTRSRVSSQSWKRVMRQAFMTDSEGAEWLNSHRTKHGVSLLANWIKSCSKDVSDEVALKKSLDTFKIVGLLSKKAKPDKKTGEYLTGALLQLSNGQLDKLAHYVLSHDELDKKEIKETLMEKSSLDLALFGRMVADDPELNVDAASQVAHAISTHAIVPEYDFYTAIDDDKEDSQAGSAMMGTLAYNSSTLYRYANVNINELMHNLGSTELTIEGVKLFVKEFMLTMPTGKENTFANKTLPQYVMITLREDTPVNLVSAFEEPVKSNHGYVEESIERLEKEYSDTLKLVEQPIYTGVLTTKQSNLNQVANTEELLDQVAKFVSEKVVDDENVNG
>LT906621.1|SNX31850.1|1301275_1301860_-|Cse2
MSHISKTVAKIIHQLYNNGDLDKGTLAKLRTANSLLSRDATAVWPLIFEYIEDKQDLSQTGEPTFAENAIFAALRAYAIYQQGTEESVFKHSDDWRENSSLFQAFGQLRSDPDFTDSLDKRVSNVLTSLNFQSAENSITQLVRILKSKGQGGQIDFAQLGEDLYRFQFSSESARQVTLKWGQDYYWKNLKDNQE
>LT906621.1|SNX31851.1|1301876_1303547_-|Cse1
MTMKNRHFNLITEPWIKVLDENYQELTVSMEEVLKNARHYRQLAGEMRSQDLVILRLLLAVLLSVYQRVNADGEPYEGLTIDDAWQVEVDSDLDFEDLIEEMQETWQTLYEGGEFSRAVFDYLKAYEDRFDFFGEHAFYQVSREFYDAHVPVKNQVAKGTGTVAIKQINRNISESGNSIAVFTPRTNTFKNQLSIDELVRWVLTYQNYTGVTDKTKVNRADKFSVSSGWLYNLYPVYAQGTNLFETLLLNLTLFEDEQDKYSQPKPVWEWATKRYLKGRIDETVPDNLPELYTLWSRMLHIEWEEGTPTIFTAGLPKVSNVNVFLEPMTTWRQDKEGYKPRVKRLDNLGTAMWRNFGDYVGTDDEENRVPGIVWWLNFLTEEGLLAQEANIDLASAVMISDGKGSSQMPAAESVDDFTIRADVLFDPDPLAARRWPRRIEEVIELTKKVGGTLYYFAKEVAELRDSNGSGSFANRISAEFYDQLNEPFLGWLASLRNDQDRDEKILEWKKALHSLVMQTARKLVQESSPTEMRGKDSTNIFTLYNATQLKIRKQLS
>LT906621.1|SNX31852.1|1303521_1306266_-|Cas3
MKELSKQVKALWGKKSNVDGQELWQPLVVHLLDTKNVINWLYGHWLTDGQRKAVQGDLSEEAGQQLAEFLGAVHDLGKATPVFQIKKSYNGDQDLDDQLMERLIQIGFDHLGDLILASPRESPHALAGEALLEQFGIDKTVGAIIGGHHGKPQSKVPRAEIDDHTKNYWQVDNLVKAREGNWLKVQRELFNFCLQECGYQSVADVPANLTQPQAILLEGLLIMADWLASTEYLGDDRSKPLFPLIPLHNSMEDLDLGARFQRAILTWRVEDQWFPEQITDIDEQFQKRWGFKPRPVQRQMDQVIQDATDPGIIIIELEPGAGKTEIALEAVEQLAYTNGEQGLFFGLPTQATSNAMFDRVTDWLAKVAKDDDAKLGIKLMHSKAEFNPTYADLKIPQAHNVEEEGSVTVNSWFSGKKSILEEFSIGTIDHLLLMGLKQKHLFLRHLGMSGKVVVIDEVHAYDAYMDSYLTKALEWLGAYHVPVIALSATLPIATRSALIEAYCKGKYGKKKVEGAPSWDKNQAYPLISVLDGKRLVQKSDFMRNTEKRVVEVERLSVEEEGLIKAVLEAVEDGGVAGVIVNTVKRAQMIASQIPKGIPKLILHSAFLAPDRAEIETKLQGLIGKKYGKRPKKMIIIGTQVLEQSLDIDFDIMFTDIAPMDLLIQRIGRLHRHDIQRPSKLVTPQVKIMGINDYGDYGSANEAIYSKYLLMKTDQYLPEQLTIPDDISPLVQATYRDDGEMEPDLREAKRVFDVKHKEEQDKAEKFQIKSPKQRKSIHGWLDSELVDANKDEVRAQAAVRDIQETLEVLMVKQVKGDYYLLDGQQLEEVDSKTIAQQLIRIPAAVTPRIDKSIELLETQTAKNFPDWQADPWLKGALVVVLDEQNSVELGNWRIHYSRKFGLSYEKADDDEKQAF
>LT906621.1|SNX31853.1|1306495_1306855_-|50S-ribosomal-protein-L19
MRQNQLIEKVTAGQLRSDIPAFRAGDTVRVHALIVEGTRERVQIFEGVVIKRHGAGISATYTVRKISNGIGVERTFPLHSPRVEKIEVVRYGRVRRAKLYYLRERTGKSARIAERRRDK
>LT906621.1|SNX31854.1|1306975_1308403_-|amino-acid-permease
MKKLIARLLKQEDPSVYQLKDGQLEPTLRTIDLIGLGTGMVVGTAIFTLPGIVAAEHTGPAVPLAFIVAAIVAGLSALAYAETASVLPFAGSAFSWMNVLFGEFFGWIAGWALLAEYFISVAFVASGWSAYMQGFLASFGIKLPTALTGGFNPASGSYVDIFAAIAILAVGWLLSHGVHQVARIENTIVAIKLLVIILFIVVGATAIHTQNYHPFIPAHRPGTTFGGWTGIMAGASQIFIAYVGFDAIAANTAETKNPQKTMPRGLIGTLVLGTGFFIVVSLVLVGMFKYSRYANNAEPAAWALRESGHYLTANLLSVVALIGIFSALIAILLASSRLIYAFGRDGLLPSFLGHVDAKRVPNRALWTITVLAMILGSIFPFTFLATLVSAGTLVAFIFVSLGIYALRRREGKDLPEGQFKMPGYPILPAVSVIFSAVIFWNLNVDAKWMMVGWFAIGLLVYFLYGIRHSTLAKKG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
LT906621_2	2.7\|848903\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	848903-848932	30	NC_029068	Lactobacillus phage LfeSau, complete genome	29697-29726	1	0.967
LT906621_2	2.20\|849762\|30\|LT906621\|CRT	849762-849791	30	MN830252	Lactobacillus phage JNU_P1, complete genome	11229-11258	2	0.933
LT906621_2	2.20\|849762\|30\|LT906621\|CRT	849762-849791	30	MN830253	Lactobacillus phage JNU_P5, complete genome	11257-11286	2	0.933
LT906621_2	2.18\|849629\|30\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849629-849658	30	GU323708	Lactobacillus phage phiPYB5, complete genome	23675-23704	3	0.9
LT906621_2	2.20\|849762\|30\|LT906621\|CRT	849762-849791	30	NC_021909	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence	456213-456242	3	0.9
LT906621_1	1.1\|289128\|38\|LT906621\|CRT	289128-289165	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	3170-3207	4	0.895
LT906621_1	1.1\|289128\|38\|LT906621\|CRT	289128-289165	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	8001-8038	4	0.895
LT906621_1	1.5\|289392\|38\|LT906621\|CRT	289392-289429	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	3170-3207	5	0.868
LT906621_1	1.5\|289392\|38\|LT906621\|CRT	289392-289429	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	8001-8038	5	0.868
LT906621_3	3.29\|1295979\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295979-1296011	33	KP054477	Lactobacillus phage LfeInf, complete genome	44085-44117	5	0.848
LT906621_1	1.3\|289260\|38\|LT906621\|CRT	289260-289297	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	3170-3207	6	0.842
LT906621_1	1.3\|289260\|38\|LT906621\|CRT	289260-289297	38	NZ_CP012877	Weissella cibaria strain CH2 plasmid pMKC04, complete sequence	8001-8038	6	0.842
LT906621_2	2.1\|848507\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	848507-848536	30	CP054911	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed3, complete sequence	217305-217334	6	0.8
LT906621_2	2.16\|849497\|30\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849497-849526	30	NZ_CP048110	Klebsiella michiganensis strain BD177 plasmid unnamed2	34076-34105	6	0.8
LT906621_2	2.16\|849497\|30\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849497-849526	30	NZ_CP048111	Klebsiella michiganensis strain BD177 plasmid unnamed3	29821-29850	6	0.8
LT906621_3	3.29\|1295979\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295979-1296011	33	MT623546	Acinetobacter phage Ab_121, complete genome	77078-77110	6	0.818
LT906621_3	3.29\|1295979\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295979-1296011	33	MK170160	Acinetobacter phage TAC1, complete genome	57132-57164	6	0.818
LT906621_3	3.29\|1295979\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295979-1296011	33	MH800199	Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome	57948-57980	6	0.818
LT906621_2	2.19\|849695\|31\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849695-849725	31	KT351734	Pectobacterium carotovorum plasmid Drgb3, complete sequence	125833-125863	7	0.774
LT906621_2	2.19\|849695\|31\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849695-849725	31	NZ_CP047439	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence	40253-40283	7	0.774
LT906621_2	2.19\|849695\|31\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	849695-849725	31	NZ_CP047440	Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence	65415-65445	7	0.774
LT906621_3	3.15\|1295123\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295123-1295155	33	HQ141410	Lactobacillus phage LF1, complete genome	39998-40030	7	0.788
LT906621_2	2.1\|848507\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	848507-848536	30	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	862104-862133	8	0.733
LT906621_2	2.12\|849233\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	849233-849262	30	NZ_CP032858	Bacillus subtilis subsp. subtilis strain 2RL2-3 plasmid unnamed1, complete sequence	4086-4115	8	0.733
LT906621_2	2.12\|849233\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	849233-849262	30	NZ_CP032873	Bacillus subtilis subsp. subtilis strain 2KL1 plasmid unnamed1, complete sequence	25119-25148	8	0.733
LT906621_2	2.12\|849233\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	849233-849262	30	NZ_CP026534	Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence	127337-127366	8	0.733
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	NZ_CP027175	Pseudomonas aeruginosa strain AR_0230 plasmid unnamed1	4790-4822	8	0.758
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	NZ_CP015000	Pseudomonas aeruginosa strain PA7790 plasmid pPA7790, complete sequence	12124-12156	8	0.758
LT906621_3	3.4\|1294449\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294449-1294481	33	MT774487	Salmonella phage MG40, complete genome	7291-7323	8	0.758
LT906621_3	3.28\|1295918\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295918-1295950	33	NC_011273	Mycobacterium phage Myrna, complete genome	7427-7459	8	0.758
LT906621_3	3.33\|1296223\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1296223-1296255	33	NZ_CP018875	Bacillus megaterium strain JX285 plasmid unnamed2, complete sequence	108535-108567	8	0.758
LT906621_2	2.6\|848837\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	848837-848866	30	NC_030948	Ralstonia phage RSP15 DNA, complete genome	20026-20055	9	0.7
LT906621_2	2.6\|848837\|30\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	848837-848866	30	MH572280	Microviridae sp. isolate SD_SC_49, complete genome	295-324	9	0.7
LT906621_3	3.21\|1295489\|34\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295489-1295522	34	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	132953-132986	9	0.735
LT906621_3	3.21\|1295489\|34\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295489-1295522	34	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	403280-403313	9	0.735
LT906621_3	3.29\|1295979\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295979-1296011	33	MN694510	Marine virus AFVG_250M493, complete genome	29059-29091	9	0.727
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	MT521994	Gordonia phage Magel, complete genome	19736-19768	10	0.697
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	MG962368	Gordonia phage Gravy, complete genome	19736-19768	10	0.697
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	MN585988	Gordonia Phage Odesza, complete genome	19736-19768	10	0.697
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	MG962369	Gordonia phage Kerry, complete genome	19736-19768	10	0.697
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	MT498039	Gordonia phage Gill, complete genome	19736-19768	10	0.697
LT906621_3	3.2\|1294327\|33\|LT906621\|PILER-CR,CRISPRCasFinder,CRT	1294327-1294359	33	NC_048817	Gordonia phage Tanis, complete genome	19586-19618	10	0.697
LT906621_3	3.33\|1296223\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1296223-1296255	33	NZ_CP015040	Rhodovulum sp. P5 plasmid pRGUI01, complete sequence	95204-95236	10	0.697
LT906621_3	3.43\|1296833\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1296833-1296865	33	NZ_AP021860	Alteromonas sp. I4 plasmid pAltI4, complete sequence	49622-49654	10	0.697
LT906621_3	3.25\|1295735\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1295735-1295767	33	MN694776	Marine virus AFVG_250M599, complete genome	36293-36325	11	0.667
LT906621_3	3.37\|1296467\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1296467-1296499	33	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	823342-823374	11	0.667
LT906621_3	3.37\|1296467\|33\|LT906621\|CRISPRCasFinder,CRT,PILER-CR	1296467-1296499	33	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	596075-596107	11	0.667

1. spacer 2.7|848903|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 1, identity: 0.967

ataatttctgcacatagcataagcaccatc	CRISPR spacer
atactttctgcacatagcataagcaccatc	Protospacer
*** **************************

2. spacer 2.20|849762|30|LT906621|CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 2, identity: 0.933

aattggaaagttggtttcgaagattccagg	CRISPR spacer
aatcggaaagttggtttcgaagatcccagg	Protospacer
***.********************.*****

3. spacer 2.20|849762|30|LT906621|CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 2, identity: 0.933

aattggaaagttggtttcgaagattccagg	CRISPR spacer
aatcggaaagttggtttcgaagatcccagg	Protospacer
***.********************.*****

4. spacer 2.18|849629|30|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 3, identity: 0.9

ccaacaagtatcataggaataacgcggcta	CRISPR spacer
ctaacaagtatcacaggaataacgcggcca	Protospacer
*.***********.**************.*

5. spacer 2.20|849762|30|LT906621|CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 3, identity: 0.9

aattggaaagttggtttcgaag--attccagg	CRISPR spacer
acttggaaagttggtttcgaagacattcca--	Protospacer
* ********************  ******

6. spacer 1.1|289128|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 4, identity: 0.895

caaatcgcacgacaaagatttttacgaaaaaattggaa	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ******************************.

7. spacer 1.1|289128|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 4, identity: 0.895

caaatcgcacgacaaagatttttacgaaaaaattggaa	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ******************************.

8. spacer 1.5|289392|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 5, identity: 0.868

caaatcgcacggcaaagatttttacgaaaaaattggaa	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ****.*************************.

9. spacer 1.5|289392|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 5, identity: 0.868

caaatcgcacggcaaagatttttacgaaaaaattggaa	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ****.*************************.

10. spacer 3.29|1295979|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 5, identity: 0.848

gtgtattccatatccttagaattttgttgcatg	CRISPR spacer
gtaaactccatatccttagaattctgttgcata	Protospacer
**. *.*****************.********.

11. spacer 1.3|289260|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 6, identity: 0.842

caaatcgcacggcaaagatttttacgaaaaaattggga	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ****.************************..

12. spacer 1.3|289260|38|LT906621|CRT matches to NZ_CP012877 (Weissella cibaria strain CH2 plasmid pMKC04, complete sequence) position: , mismatch: 6, identity: 0.842

caaatcgcacggcaaagatttttacgaaaaaattggga	CRISPR spacer
tgaatctcacgacaaagatttttacgaaaaaattggag	Protospacer
..**** ****.************************..

13. spacer 2.1|848507|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to CP054911 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

gttttgttttgccaatagcaacatcggccg	CRISPR spacer
cagttcctttgccaatagcaacaacggccg	Protospacer
   ** .**************** ******

14. spacer 2.16|849497|30|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048110 (Klebsiella michiganensis strain BD177 plasmid unnamed2) position: , mismatch: 6, identity: 0.8

tttacaacgccagtgatattgcggttgatc	CRISPR spacer
ttgaaaacgccagtgatattgcggaaggta	Protospacer
** * *******************  *.*

15. spacer 2.16|849497|30|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048111 (Klebsiella michiganensis strain BD177 plasmid unnamed3) position: , mismatch: 6, identity: 0.8

tttacaacgccagtgatattgcggttgatc	CRISPR spacer
ttgaaaacgccagtgatattgcggaaggta	Protospacer
** * *******************  *.*

16. spacer 3.29|1295979|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to MT623546 (Acinetobacter phage Ab_121, complete genome) position: , mismatch: 6, identity: 0.818

gtgtattccatatccttagaattttgttgcatg---	CRISPR spacer
ttgtattccatatccttagca---tgttgaatgtaa	Protospacer
 ****************** *   ***** ***

17. spacer 3.29|1295979|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to MK170160 (Acinetobacter phage TAC1, complete genome) position: , mismatch: 6, identity: 0.818

gtgtattccatatccttagaattttgttgcatg---	CRISPR spacer
ttgtattccatatccttagca---tgttgaatgtaa	Protospacer
 ****************** *   ***** ***

18. spacer 3.29|1295979|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to MH800199 (Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome) position: , mismatch: 6, identity: 0.818

gtgtattccatatccttagaattttgttgcatg---	CRISPR spacer
ttgtattccatatccttagca---tgttgaatgtaa	Protospacer
 ****************** *   ***** ***

19. spacer 2.19|849695|31|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to KT351734 (Pectobacterium carotovorum plasmid Drgb3, complete sequence) position: , mismatch: 7, identity: 0.774

tcctgttttggctagttctcaaaacttatat	CRISPR spacer
tacccatttagctaggtctcaaaacttataa	Protospacer
* *.  ***.***** **************

20. spacer 2.19|849695|31|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047439 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-2, complete sequence) position: , mismatch: 7, identity: 0.774

tcctgttttggctagttctcaaaacttatat	CRISPR spacer
tttttctttgtctagttctgaaaacttattt	Protospacer
*..* .**** ******** ********* *

21. spacer 2.19|849695|31|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047440 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-3, complete sequence) position: , mismatch: 7, identity: 0.774

tcctgttttggctagttctcaaaacttatat	CRISPR spacer
tttttctttgtctagttctgaaaacttattt	Protospacer
*..* .**** ******** ********* *

22. spacer 3.15|1295123|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to HQ141410 (Lactobacillus phage LF1, complete genome) position: , mismatch: 7, identity: 0.788

ctcagatcgctagaaagcgtcgcgggcaagcaa	CRISPR spacer
ctgaaaagcctagaaagcgtcgcgggaaagaaa	Protospacer
** *.*   ***************** *** **

23. spacer 2.1|848507|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

gttttgttttgccaatagcaacatcggccg	CRISPR spacer
aatttggtttgccaatatcaacatcacggg	Protospacer
. **** ********** *******.   *

24. spacer 2.12|849233|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032858 (Bacillus subtilis subsp. subtilis strain 2RL2-3 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttcatttagcaagatattgaaaaaccat	CRISPR spacer
tattcatttagaaagatattgaaaggaaaa	Protospacer
. ********* ************..  *

25. spacer 2.12|849233|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032873 (Bacillus subtilis subsp. subtilis strain 2KL1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttcatttagcaagatattgaaaaaccat	CRISPR spacer
tattcatttagaaagatattgaaaggaaaa	Protospacer
. ********* ************..  *

26. spacer 2.12|849233|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026534 (Bacillus velezensis strain DKU_NT_04 plasmid p1_DKU_NT_04, complete sequence) position: , mismatch: 8, identity: 0.733

ccttcatttagcaagatattgaaaaaccat	CRISPR spacer
tattcatttagaaagatattgaaaggaaaa	Protospacer
. ********* ************..  *

27. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027175 (Pseudomonas aeruginosa strain AR_0230 plasmid unnamed1) position: , mismatch: 8, identity: 0.758

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cccgcttgttctggctgttggagtgcccggcgg	Protospacer
.*  *  *** *********** ******** *

28. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015000 (Pseudomonas aeruginosa strain PA7790 plasmid pPA7790, complete sequence) position: , mismatch: 8, identity: 0.758

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cccgcttgttctggctgttggagtgcccggcgg	Protospacer
.*  *  *** *********** ******** *

29. spacer 3.4|1294449|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 8, identity: 0.758

gtggcgacgtcacctactagagtttccatatta	CRISPR spacer
ccggcgacgtcacctactacggtttcccctttg	Protospacer
 .***************** .****** . **.

30. spacer 3.28|1295918|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 8, identity: 0.758

agtccgatc------gtgatgccgaagtgcttgtagatg	CRISPR spacer
------atcagcggggtgttgccgaagggcttgtagatg	Protospacer
      ***      *** ******** ***********

31. spacer 3.33|1296223|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018875 (Bacillus megaterium strain JX285 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gctggcggtttgcacggcaacggtagcgtttga	CRISPR spacer
tttggcggttttcatggcaacggtagggcctgg	Protospacer
 .********* **.*********** *..**.

32. spacer 2.6|848837|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NC_030948 (Ralstonia phage RSP15 DNA, complete genome) position: , mismatch: 9, identity: 0.7

agttctccgaatccgtcttcattctccgtt	CRISPR spacer
agttctccgaatccgtcttcaagaatgaag	Protospacer
*********************    . .

33. spacer 2.6|848837|30|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MH572280 (Microviridae sp. isolate SD_SC_49, complete genome) position: , mismatch: 9, identity: 0.7

agttctccgaatccgtcttcattctccgtt	CRISPR spacer
cgttctccgaatccttcttcatctatttct	Protospacer
 ************* *******.. .. .*

34. spacer 3.21|1295489|34|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

catattgctaaaacgatcggtgatacagactcag	CRISPR spacer
gatattgctaagacgatcggtgacacggtcggca	Protospacer
 **********.***********.**.* *   .

35. spacer 3.21|1295489|34|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

catattgctaaaacgatcggtgatacagactcag	CRISPR spacer
gatattgctaagacgatcggtgacacggtcggca	Protospacer
 **********.***********.**.* *   .

36. spacer 3.29|1295979|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to MN694510 (Marine virus AFVG_250M493, complete genome) position: , mismatch: 9, identity: 0.727

gtgtattccatatccttagaattttgttgcatg	CRISPR spacer
ttgtatttcatatccttaggattttttgaaact	Protospacer
 ******.***********.***** * . *.

37. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MT521994 (Gordonia phage Magel, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

38. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MG962368 (Gordonia phage Gravy, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

39. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MN585988 (Gordonia Phage Odesza, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

40. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MG962369 (Gordonia phage Kerry, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

41. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to MT498039 (Gordonia phage Gill, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

42. spacer 3.2|1294327|33|LT906621|PILER-CR,CRISPRCasFinder,CRT matches to NC_048817 (Gordonia phage Tanis, complete genome) position: , mismatch: 10, identity: 0.697

tcaccaggttgtggctgttggattgcccggctg	CRISPR spacer
cgaccaggttgtggctgtcggaatgctctcgga	Protospacer
. ****************.*** ***.*    .

43. spacer 3.33|1296223|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015040 (Rhodovulum sp. P5 plasmid pRGUI01, complete sequence) position: , mismatch: 10, identity: 0.697

gctggcggtttgcacggcaacggtagcgtttga	CRISPR spacer
gacagcggtctggacggcaacggtagcggcatc	Protospacer
* ..*****.** *************** .

44. spacer 3.43|1296833|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP021860 (Alteromonas sp. I4 plasmid pAltI4, complete sequence) position: , mismatch: 10, identity: 0.697

caattaatgctgatttgaaagttggagatataa	CRISPR spacer
aaattgatgctgatttgaaaattggcaaagcct	Protospacer
 ****.**************.**** .* ..

45. spacer 3.25|1295735|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to MN694776 (Marine virus AFVG_250M599, complete genome) position: , mismatch: 11, identity: 0.667

cggtaaagtcgttccatcccggctcaagacgaa	CRISPR spacer
cgggaaagtccttccatcccggcttggccttgc	Protospacer
*** ****** *************...  . .

46. spacer 3.37|1296467|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 11, identity: 0.667

tgagacgttcggcgcatggaaacagattactgg	CRISPR spacer
gaagacgttcggcgcatgcaagcagacccaaat	Protospacer
 .**************** **.****..   .

47. spacer 3.37|1296467|33|LT906621|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 11, identity: 0.667

tgagacgttcggcgcatggaaacagattactgg	CRISPR spacer
gaagacgttcggcgcatgcaagcagacccaaat	Protospacer
 .**************** **.****..   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

22160 : 61660

Lactobacillus_phage(18.18%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30688.1\|22160_23432_+\|protease	serine protease Do-like HtrA	A0A1B1IT49	uncultured_Mediterranean_phage	5.8e-19	29.3
SNX30689.1\|23938_24418_+	ribosomal RNA large subunit methyltransferase H	NA	NA	NA	NA
SNX30690.1\|24629_25058_+	putative transcriptional regulator	NA	NA	NA	NA
SNX30691.1\|25063_25999_+	transcription regulator	NA	NA	NA	NA
SNX30692.1\|26378_27722_+	putative integral membrane transport protein	NA	NA	NA	NA
SNX30693.1\|27734_29981_+	maltose phosphorylase	NA	NA	NA	NA
SNX30694.1\|30127_30796_+	beta-phosphoglucomutase	NA	NA	NA	NA
SNX30695.1\|31583_31835_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX30696.1\|31940_32243_-\|transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX30697.1\|32246_32417_-\|transposase	transposase	NA	NA	NA	NA
SNX30698.1\|32473_33715_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX30699.1\|33853_34348_-	hypothetical protein	NA	NA	NA	NA
SNX30700.1\|34649_35642_-	D-lactate dehydrogenase	M1HMI7	Paramecium_bursaria_Chlorella_virus	5.7e-38	32.2
SNX30701.1\|35657_36914_-	putative N-acetyl-LL-diaminopimelate aminotransferase	NA	NA	NA	NA
SNX30702.1\|37190_37421_+	hypothetical protein	NA	NA	NA	NA
SNX30703.1\|37515_39609_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpL	H6X3M6	Enterobacteria_phage	1.5e-120	40.3
SNX30704.1\|39904_41365_+	cardiolipin synthase	NA	NA	NA	NA
SNX30705.1\|41847_45585_+	ATP-dependent helicase/deoxyribonuclease subunit B	NA	NA	NA	NA
SNX30706.1\|45591_49605_+	ATP-dependent helicase/deoxyribonuclease subunit A	S5MMD7	Bacillus_phage	5.7e-12	23.1
SNX30707.1\|49604_50468_+	aldo-keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.6e-58	46.4
SNX30708.1\|50705_52331_+	putative glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
SNX30709.1\|52574_52931_-	transcription regulator	NA	NA	NA	NA
SNX30710.1\|52967_54071_-	ABC-type multidrug transport system, permease component	NA	NA	NA	NA
SNX30711.1\|55567_56542_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	3.7e-135	69.0
SNX30712.1\|56740_58030_+	adenylosuccinate synthetase	A0A285PX35	Cedratvirus	5.1e-71	35.8
SNX30713.1\|58358_59741_+	succinate-semialdehyde dehydrogenase [NADP(+)]	NA	NA	NA	NA
SNX30714.1\|59885_60188_-\|transposase	putative partial transposase	A0A0P0IQC6	Lactobacillus_phage	8.6e-22	52.0
SNX30715.1\|60418_61660_+\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5

DBSCAN-SWA_2

86494 : 127677

Bacillus_phage(21.43%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30737.1\|86494_87793_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.1e-92	48.6
SNX30738.1\|88295_89309_-\|tRNA	tryptophane--tRNA ligase	NA	NA	NA	NA
SNX30739.1\|89565_90819_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	5.1e-84	42.0
SNX30740.1\|91287_92742_+	probable amino-acid permease	NA	NA	NA	NA
SNX30741.1\|92745_93489_+	probable amino acid transport ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-32	41.9
SNX30742.1\|93947_95321_+	probable amino-acid permease	NA	NA	NA	NA
SNX30743.1\|96201_97401_+	purine nucleoside transport protein	NA	NA	NA	NA
SNX30744.1\|97636_98557_+	non-specific ribonucleoside hydrolase RihC	NA	NA	NA	NA
SNX30745.1\|98745_99483_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA
SNX30746.1\|99501_100437_+	nucleoid occlusion protein	I3NLC2	Bifidobacterium_phage	6.2e-10	33.6
SNX30747.1\|100450_101284_+	probable chromosome-partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.0e-16	32.9
SNX30748.1\|101296_101497_+	hypothetical protein	NA	NA	NA	NA
SNX30749.1\|101512_102610_+	ribosome-binding ATPase YchF	NA	NA	NA	NA
SNX30750.1\|102643_103417_+	hypothetical protein	NA	NA	NA	NA
SNX30751.1\|103678_104821_+	inosine-5'-monophosphate dehydrogenase	A0A1V0SHK8	Klosneuvirus	6.7e-59	32.6
SNX30752.1\|105169_106165_+	transcriptional regulator LytR	NA	NA	NA	NA
SNX30753.1\|106164_106935_+	putative exopolysaccharide biosynthesis protein	NA	NA	NA	NA
SNX30754.1\|106951_107692_+	tyrosine-protein kinase YwqD	NA	NA	NA	NA
SNX30755.1\|107715_108486_+	tyrosine-protein phosphatase YwqE	NA	NA	NA	NA
SNX30756.1\|108516_109458_+	nucleoside-diphosphate-sugar epimerase	A0A1V0SAI6	Catovirus	1.9e-43	35.8
SNX30757.1\|109435_110101_+	glycosyltransferase	NA	NA	NA	NA
SNX30758.1\|110137_110971_+	glycosyltransferase	NA	NA	NA	NA
SNX30759.1\|111228_111777_-\|transposase	putative transposase	NA	NA	NA	NA
SNX30760.1\|111765_112053_+\|transposase	putative transposase	NA	NA	NA	NA
SNX30761.1\|112076_112955_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX30762.1\|113255_114467_+	hypothetical protein	NA	NA	NA	NA
SNX30763.1\|114456_115356_+	putative glycosyltransferase	NA	NA	NA	NA
SNX30764.1\|115356_116343_+	putative exopolysaccharide phosphotransferase	NA	NA	NA	NA
SNX30765.1\|116439_116703_+\|transposase	putative transposase	A0A0C5AJ30	Paenibacillus_phage	6.8e-07	37.5
SNX30766.1\|117517_118963_+	putative polysaccharide biosynthesis protein	NA	NA	NA	NA
SNX30767.1\|119051_119279_+\|transposase	putative transposase	NA	NA	NA	NA
SNX30768.1\|119282_119975_+\|transposase	transposase	H7BW61	unidentified_phage	1.3e-25	35.2
SNX30769.1\|120032_120269_-	hypothetical protein	NA	NA	NA	NA
SNX30770.1\|120382_120889_-	hypothetical protein	NA	NA	NA	NA
SNX30771.1\|121076_121775_+	transcriptional regulatory protein	W8CYM9	Bacillus_phage	3.2e-35	36.6
SNX30772.1\|121972_123115_+	sensor protein kinase	W8CYF6	Bacillus_phage	1.9e-29	30.0
SNX30773.1\|123114_124410_+	D-alanyl-D-alanine carboxypeptidase DacA	NA	NA	NA	NA
SNX30774.1\|124625_125501_+	putative branched-chain amino acid transport protein	NA	NA	NA	NA
SNX30775.1\|125500_125920_+	hypothetical protein	NA	NA	NA	NA
SNX30776.1\|126094_126502_+\|transposase	transposase	A0A286QN76	Streptococcus_phage	4.4e-45	62.1
SNX30777.1\|126501_127677_+\|transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	2.0e-114	54.9

DBSCAN-SWA_3

150123 : 217458

Lactobacillus_phage(27.78%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30796.1\|150123_150570_-\|transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	3.2e-33	50.0
SNX30797.1\|150653_151895_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.4e-54	37.2
SNX30798.1\|152311_153007_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
SNX30799.1\|153130_154309_+	putative N-acetyl-LL-diaminopimelate aminotransferase	NA	NA	NA	NA
SNX30800.1\|154421_155426_+	hypothetical protein	NA	NA	NA	NA
SNX30801.1\|155910_156282_+	hypothetical protein	NA	NA	NA	NA
SNX30802.1\|156295_156604_+	hypothetical protein	NA	NA	NA	NA
SNX30803.1\|156603_158535_+	copper-exporting P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-91	37.3
SNX30804.1\|158815_160198_+	lincomycin resistance protein LmrB	NA	NA	NA	NA
SNX30805.1\|160245_160722_-	putative nucleoside deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	7.7e-17	35.2
SNX30806.1\|166695_167850_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX30807.1\|167987_169163_-\|transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	2.0e-114	54.9
SNX30808.1\|169162_169570_-\|transposase	putative transposase	A0A286QN76	Streptococcus_phage	4.4e-45	62.1
SNX30809.1\|169892_170528_-	hypothetical protein	NA	NA	NA	NA
SNX30810.1\|170653_171043_+	putative tautomerase	NA	NA	NA	NA
SNX30811.1\|171149_171545_-	transcription regulator	NA	NA	NA	NA
SNX30812.1\|171779_172436_+	putative nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	6.0e-12	25.7
SNX30813.1\|172668_172980_+	hypothetical protein	NA	NA	NA	NA
SNX30814.1\|174079_174274_+	hypothetical protein	NA	NA	NA	NA
SNX30815.1\|174767_175136_+	hypothetical protein	NA	NA	NA	NA
SNX30816.1\|175439_175844_+\|transposase	transposase	H7BWC8	unidentified_phage	7.5e-13	30.7
SNX30817.1\|175941_176508_+	integral membrane protein	NA	NA	NA	NA
SNX30818.1\|176606_177059_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	2.1e-32	51.5
SNX30819.1\|177137_178388_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.9e-55	36.8
SNX30820.1\|178737_179076_+	hypothetical protein	NA	NA	NA	NA
SNX30821.1\|179617_181114_-	hypothetical protein	NA	NA	NA	NA
SNX30822.1\|181309_183166_+	hypothetical protein	NA	NA	NA	NA
SNX30823.1\|183155_183947_+	cell surface protein	NA	NA	NA	NA
SNX30824.1\|183961_184840_+	high-affinity heme uptake system protein IsdE	NA	NA	NA	NA
SNX30825.1\|184841_185768_+	probable heme-iron transport system permease protein IsdF	NA	NA	NA	NA
SNX30826.1\|185760_186522_+	iron compound import ATP-binding protein	W8CYL7	Bacillus_phage	3.0e-15	30.5
SNX30827.1\|186626_187559_-\|transposase	transposase	H7BW61	unidentified_phage	1.5e-27	30.7
SNX30828.1\|187828_189133_-	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	4.8e-45	27.5
SNX30829.1\|189453_190293_+	exodeoxyribonuclease	M1PSC0	Streptococcus_phage	1.4e-98	62.8
SNX30830.1\|196097_197069_+	putative 2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	5.4e-25	31.7
SNX30831.1\|197238_198450_+	purine catabolism protein PucG	NA	NA	NA	NA
SNX30832.1\|198625_200284_-	putative purine catabolism regulatory protein	NA	NA	NA	NA
SNX30833.1\|200373_201201_-	hypothetical protein	NA	NA	NA	NA
SNX30834.1\|201336_202695_-	nucleobase:cation symporter family protein	NA	NA	NA	NA
SNX30835.1\|203281_204640_+	allantoinase	NA	NA	NA	NA
SNX30836.1\|204809_206030_+	allantoate amidohydrolase	NA	NA	NA	NA
SNX30837.1\|206045_206831_+	(S)-ureidoglycine aminohydrolase	NA	NA	NA	NA
SNX30838.1\|206850_207915_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
SNX30839.1\|207935_209696_+	protein FdrA	NA	NA	NA	NA
SNX30840.1\|209698_210964_+	uncharacterized protein YlbE	NA	NA	NA	NA
SNX30841.1\|210966_211761_+	hypothetical protein	NA	NA	NA	NA
SNX30842.1\|211784_212729_+	carbamate kinase	NA	NA	NA	NA
SNX30843.1\|212846_213785_+	pyrimidine-specific ribonucleoside hydrolase RihA	NA	NA	NA	NA
SNX30844.1\|213861_214509_+	nitroreductase	NA	NA	NA	NA
SNX30845.1\|214518_215250_+	hypothetical protein	NA	NA	NA	NA
SNX30846.1\|215260_215575_+	hypothetical protein	A0A2R3ZXQ3	Staphylococcus_phage	5.1e-17	39.4
SNX30847.1\|215683_215986_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX30848.1\|216216_217458_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5

DBSCAN-SWA_4

221644 : 288631

Lactobacillus_phage(12.5%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30851.1\|221644_221947_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX30852.1\|222177_223419_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX30853.1\|223587_223956_+	putative transcription regulator	NA	NA	NA	NA
SNX30854.1\|223990_224536_+	hypothetical protein	NA	NA	NA	NA
SNX30855.1\|224603_225368_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
SNX30856.1\|226044_226893_+	ABC-type metal ion transport system, periplasmic component/surface antigen	NA	NA	NA	NA
SNX30857.1\|227034_228198_+	Na(+)/H(+) antiporter	NA	NA	NA	NA
SNX30858.1\|228240_230559_-	helicase IV	NA	NA	NA	NA
SNX30859.1\|230761_231700_+	exopolyphosphatase	NA	NA	NA	NA
SNX30860.1\|231692_232970_+	hydroxymethylglutaryl-CoA reductase	NA	NA	NA	NA
SNX30861.1\|232950_233934_+	hypothetical protein	NA	NA	NA	NA
SNX30862.1\|233936_234635_+	NAD-dependent protein deacetylase	A0A068EPD4	Bacillus_phage	3.2e-19	31.7
SNX30863.1\|234850_236029_+	multidrug resistance protein	NA	NA	NA	NA
SNX30864.1\|236084_236927_+	UPF0759 protein YunF	NA	NA	NA	NA
SNX30865.1\|237027_239028_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	9.2e-88	35.9
SNX30866.1\|239031_239820_+	hydrolase	NA	NA	NA	NA
SNX30867.1\|239806_240376_+	ribonuclease M5	NA	NA	NA	NA
SNX30868.1\|240368_241256_+	ribosomal RNA small subunit methyltransferase	NA	NA	NA	NA
SNX30869.1\|241535_242387_+	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
SNX30870.1\|242564_243470_+	putative metal-binding protein	NA	NA	NA	NA
SNX30871.1\|243604_244138_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
SNX30872.1\|244137_244932_+	ABC-type Mn2+/Zn2+ transport system permease component	NA	NA	NA	NA
SNX30873.1\|245156_245993_+	pur operon repressor	NA	NA	NA	NA
SNX30874.1\|246008_247376_+	bifunctional protein GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.9e-33	34.4
SNX30875.1\|247451_248438_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	3.8e-42	33.9
SNX30876.1\|248546_249275_+	hypothetical protein	NA	NA	NA	NA
SNX30877.1\|249449_250271_-	putative phosphatase	NA	NA	NA	NA
SNX30878.1\|250282_251638_-	putative HD superfamily phosphohydrolase	A0A291ATA1	Pandoravirus	1.4e-26	32.1
SNX30879.1\|251751_252177_+	hypothetical protein	NA	NA	NA	NA
SNX30880.1\|252222_252798_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
SNX30881.1\|252964_254566_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.0e-145	50.1
SNX30882.1\|254776_256045_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
SNX30883.1\|256139_256385_+	50S ribosomal protein L31 type B	NA	NA	NA	NA
SNX30884.1\|257799_258501_+	putative sortase	NA	NA	NA	NA
SNX30885.1\|259155_260397_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX30886.1\|260582_261047_-	putative protein-tyrosine phosphatase	NA	NA	NA	NA
SNX30887.1\|261183_261741_+	protein LemA	NA	NA	NA	NA
SNX30888.1\|261751_262651_+\|protease	protease HtpX homolog	NA	NA	NA	NA
SNX30889.1\|262825_264205_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
SNX30890.1\|264375_265854_+	DEAD-box ATP-dependent RNA helicase CshA	A0A1V0SBR7	Catovirus	1.1e-66	38.0
SNX30891.1\|265857_266217_+	holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
SNX30892.1\|266219_267341_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	3.2e-29	28.9
SNX30893.1\|267352_267706_+	putative mRNA interferase	A0A2K9VCH5	Lactobacillus_phage	3.0e-10	38.5
SNX30894.1\|267838_268474_-	hypothetical protein	NA	NA	NA	NA
SNX30895.1\|268661_269222_+\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
SNX30896.1\|269239_272779_+	transcription-repai-coupling factor	NA	NA	NA	NA
SNX30897.1\|272778_273051_+	hypothetical protein	NA	NA	NA	NA
SNX30898.1\|273139_273496_+	hypothetical protein	NA	NA	NA	NA
SNX30899.1\|273625_274132_+	hypothetical protein	NA	NA	NA	NA
SNX30900.1\|274131_275481_+\|tRNA	tRNA(Ile)-lysidine synthase	A0A0N7G7K4	Chrysochromulina_ericina_virus	2.6e-09	25.9
SNX30901.1\|275497_276046_+	hypoxanthine-guanine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.1e-10	31.1
SNX30902.1\|276129_278295_+\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	9.6e-107	48.8
SNX30903.1\|278314_279253_+	33 kDa chaperonin	NA	NA	NA	NA
SNX30904.1\|279341_280343_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
SNX30905.1\|280358_281852_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	1.6e-89	41.4
SNX30906.1\|282154_282445_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX30907.1\|288241_288631_+\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_5

291901 : 357360

Bacillus_phage(17.65%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30910.1\|291901_292834_-\|transposase	transposase	H7BW61	unidentified_phage	1.5e-27	30.7
SNX30911.1\|293014_294613_+	hypothetical protein	NA	NA	NA	NA
SNX30912.1\|294885_295242_+\|transposase	putative transposase	NA	NA	NA	NA
SNX30913.1\|295243_295465_-\|transposase	putative transposase	NA	NA	NA	NA
SNX30914.1\|295641_300078_+	glucosyltransferase-I	NA	NA	NA	NA
SNX30915.1\|300295_300685_-\|transposase	putative transposase	NA	NA	NA	NA
SNX30916.1\|301473_303699_+	hypothetical protein	NA	NA	NA	NA
SNX30917.1\|303931_305428_+	di-/tripeptide transporter	A0A0P0IY73	Acinetobacter_phage	2.3e-67	32.5
SNX30918.1\|305521_306367_+	putative phosphoesterase	NA	NA	NA	NA
SNX30919.1\|306663_307305_+	hypothetical protein	NA	NA	NA	NA
SNX30920.1\|307387_308101_+	aspartate racemase	NA	NA	NA	NA
SNX30921.1\|308452_308719_+\|transposase	putative transposase	A0A1P8BMC0	Lactococcus_phage	3.5e-27	72.1
SNX30922.1\|308715_309879_+\|transposase	transposase	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
SNX30923.1\|310080_310782_+	transcription regulator	NA	NA	NA	NA
SNX30924.1\|310812_312273_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	2.8e-110	45.9
SNX30925.1\|312289_313120_+	NH(3)-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	3.6e-78	56.5
SNX30926.1\|313123_315301_+	protein tex	NA	NA	NA	NA
SNX30927.1\|315293_315749_+	putative SprT-like protein	NA	NA	NA	NA
SNX30928.1\|316035_317916_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	1.5e-95	33.0
SNX30929.1\|317899_318862_+	beta-galactosidase small subunit	NA	NA	NA	NA
SNX30930.1\|319004_319961_+	putative malate transporter	NA	NA	NA	NA
SNX30931.1\|320249_320927_+	2,3-bisphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
SNX30932.1\|320930_321806_+	putative esterase	NA	NA	NA	NA
SNX30933.1\|322122_323460_-	aminopeptidase C	A0A2H4UU28	Bodo_saltans_virus	9.6e-49	27.6
SNX30934.1\|323523_324138_-	putative acetyltransferase	NA	NA	NA	NA
SNX30935.1\|324165_324786_-	ribose 5-phosphate isomerase A	NA	NA	NA	NA
SNX30936.1\|324886_325189_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX30937.1\|325419_326661_+\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX30938.1\|326863_327175_-	hypothetical protein	NA	NA	NA	NA
SNX30939.1\|327375_327915_+	putative deoxyuridine 5'-triphosphate nucleotidohydrolase	J9PV85	Bacillus_phage	1.5e-37	47.2
SNX30940.1\|327927_329301_+	DNA repair protein RadA homolog	NA	NA	NA	NA
SNX30941.1\|329332_330466_+	uncharacterized PIN and TRAM-domain containing protein	NA	NA	NA	NA
SNX30942.1\|330536_332033_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
SNX30943.1\|332100_332409_+	hypothetical protein	NA	NA	NA	NA
SNX30944.1\|332433_332670_+	hypothetical protein	NA	NA	NA	NA
SNX30945.1\|333017_334436_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	6.0e-49	31.1
SNX30946.1\|334442_334856_+	mini-ribonuclease 3	NA	NA	NA	NA
SNX30947.1\|334845_335601_+\|tRNA	putative TrmH family tRNA/rRNA methyltransferase	NA	NA	NA	NA
SNX30948.1\|335838_336417_+	putative RNA polymerase sigma factor	NA	NA	NA	NA
SNX30949.1\|336642_336819_+	hypothetical protein	NA	NA	NA	NA
SNX30950.1\|336927_337473_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA
SNX30951.1\|337592_338018_+	50S ribosomal protein L11	NA	NA	NA	NA
SNX30952.1\|338111_338804_+	50S ribosomal protein L1	NA	NA	NA	NA
SNX30953.1\|338951_340280_-	serine/threonine exchanger SteT	NA	NA	NA	NA
SNX30954.1\|340656_341160_+	50S ribosomal protein L10	NA	NA	NA	NA
SNX30955.1\|341228_341594_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
SNX30956.1\|342037_343474_+	cytochrome bd ubiquinol oxidase subunit 1	NA	NA	NA	NA
SNX30957.1\|343475_344492_+	cytochrome bd ubiquinol oxidase subunit 2	NA	NA	NA	NA
SNX30958.1\|344491_346222_+	ATP-binding/permease protein CydD	W8CYL7	Bacillus_phage	6.0e-27	23.1
SNX30959.1\|346211_347963_+	ATP-binding/permease protein CydC	W8CYL7	Bacillus_phage	7.5e-17	24.8
SNX30960.1\|348440_351044_+	aldehyde-alcohol dehydrogenase	NA	NA	NA	NA
SNX30961.1\|351569_352949_+	branched-chain amino acid transport system carrier protein	NA	NA	NA	NA
SNX30962.1\|353023_354025_-	ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	1.1e-116	63.0
SNX30963.1\|354086_356258_-	ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	1.7e-249	59.4
SNX30964.1\|356357_356579_-	glutaredoxin-like protein NrdH	X2KRY7	Enterococcus_phage	3.2e-10	54.7
SNX30965.1\|356835_357360_+\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA

DBSCAN-SWA_6

380976 : 442346

Streptococcus_phage(26.32%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX30990.1\|380976_382011_+\|tRNA	tRNA N6-adenosine threonylcarbamoyltransferase	A0A0R6PI74	Moraxella_phage	1.1e-60	40.5
SNX30991.1\|382146_382629_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX30992.1\|382984_383431_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA
SNX30993.1\|383515_383956_+	transcription regulator	NA	NA	NA	NA
SNX30994.1\|383979_384939_+	3-oxoacyl-[acyl-carrier-protein] synthase 3	NA	NA	NA	NA
SNX30995.1\|384967_385216_+	acyl carrier protein	NA	NA	NA	NA
SNX30996.1\|385215_386163_+	malonyl CoA-acyl carrier protein transacylase	NA	NA	NA	NA
SNX30997.1\|386146_386878_+	3-oxoacyl-[acyl-carrier protein] reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	6.3e-18	30.1
SNX30998.1\|386890_388129_+	3-oxoacyl-[acyl-carrier-protein] synthase 2	NA	NA	NA	NA
SNX30999.1\|388131_388578_+	biotin carboxyl carrier protein of acetyl-CoA carboxylase	NA	NA	NA	NA
SNX31000.1\|388580_389015_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ	NA	NA	NA	NA
SNX31001.1\|389035_390433_+	biotin carboxylase	NA	NA	NA	NA
SNX31002.1\|390401_391250_+	acetyl-coenzyme A carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA
SNX31003.1\|391242_392016_+	acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
SNX31004.1\|392033_392798_+	enoyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
SNX31005.1\|392849_393452_+	putative biotin transporter BioY	NA	NA	NA	NA
SNX31006.1\|393451_394414_+	bifunctional ligase/repressor BirA	NA	NA	NA	NA
SNX31007.1\|394534_396478_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	2.7e-60	30.5
SNX31008.1\|396644_397295_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
SNX31009.1\|397607_397889_+	10 kDa chaperonin	A0A221S3C8	uncultured_virus	3.4e-12	43.0
SNX31010.1\|397913_399545_+	60 kDa chaperonin	A0A240F779	uncultured_virus	6.9e-158	54.5
SNX31011.1\|399684_401523_+	amino acid permease	NA	NA	NA	NA
SNX31012.1\|401729_401996_+	hypothetical protein	NA	NA	NA	NA
SNX31013.1\|402192_402831_-	IMPACT family member	A0A1X9I5T8	Streptococcus_phage	4.6e-41	43.0
SNX31014.1\|402894_404211_+	ComF operon protein 1	A0A1X9I5S6	Streptococcus_phage	3.6e-80	42.4
SNX31015.1\|404207_404882_+	putative ComF operon protein 3	NA	NA	NA	NA
SNX31016.1\|405017_405566_+	hypothetical protein	NA	NA	NA	NA
SNX31017.1\|405736_408106_+	protein translocase subunit SecA	NA	NA	NA	NA
SNX31018.1\|408214_409282_+	peptide chain release factor 2	NA	NA	NA	NA
SNX31019.1\|409337_409667_+	hypothetical protein	NA	NA	NA	NA
SNX31020.1\|409666_410020_+	hypothetical protein	NA	NA	NA	NA
SNX31021.1\|410034_410997_+	HPr kinase/phosphorylase	NA	NA	NA	NA
SNX31022.1\|410989_411835_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
SNX31023.1\|411831_412845_+	glycerol-3-phosphate dehydrogenase [NAD(P)+]	NA	NA	NA	NA
SNX31024.1\|412907_413819_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	3.9e-70	46.1
SNX31025.1\|414176_414380_+\|transposase	putative transposase	A0A1P8BMC0	Lactococcus_phage	2.1e-16	64.7
SNX31026.1\|414403_415567_+\|transposase	putative transposase	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
SNX31027.1\|416162_416942_+	hydrolase MtnU	NA	NA	NA	NA
SNX31028.1\|416957_418136_+	transaminase MtnE	NA	NA	NA	NA
SNX31029.1\|418160_419135_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
SNX31030.1\|419233_419653_+	hypothetical protein	NA	NA	NA	NA
SNX31031.1\|419802_420744_+	thioredoxin reductase	G3MA85	Bacillus_virus	4.1e-78	48.4
SNX31032.1\|420643_421465_+	homoserine O-succinyltransferase	NA	NA	NA	NA
SNX31033.1\|421503_421836_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	5.9e-24	54.0
SNX31034.1\|421990_422683_+\|transposase	putative transposase	H7BW61	unidentified_phage	8.5e-25	34.0
SNX31035.1\|422903_423932_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
SNX31036.1\|423957_424899_-	L-2-hydroxyisocaproate dehydrogenase	NA	NA	NA	NA
SNX31037.1\|425026_425803_+	putative phosphatase	NA	NA	NA	NA
SNX31038.1\|425865_427590_+	phosphoglucomutase	A0A1X9I671	Streptococcus_phage	2.3e-196	60.2
SNX31039.1\|427799_428435_+	hydrolase	NA	NA	NA	NA
SNX31040.1\|428440_428671_+	hypothetical protein	NA	NA	NA	NA
SNX31041.1\|428770_430786_+	UvrABC system protein B	NA	NA	NA	NA
SNX31042.1\|430795_433657_+	UvrABC system protein A	A0A1B1IVR3	uncultured_Mediterranean_phage	3.4e-301	54.8
SNX31043.1\|433746_434832_+	hypothetical protein	NA	NA	NA	NA
SNX31044.1\|435050_435920_+	nucleotide-binding protein	A0A0R8VB27	Thermobifida_phage	7.5e-10	31.7
SNX31045.1\|435941_436919_+	putative gluconeogenesis factor	A1IMD5	Streptococcus_phage	1.4e-92	53.3
SNX31046.1\|436936_437875_+	putative sporulation transcription regulator WhiA	Q7AWZ3	Streptococcus_phage	2.3e-49	36.8
SNX31047.1\|437995_438643_-	putative aminopyrimidine aminohydrolase	NA	NA	NA	NA
SNX31048.1\|438756_439347_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.6e-56	56.8
SNX31049.1\|441410_442346_-\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_7

544300 : 608823

Bacillus_phage(22.22%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31142.1\|544300_545440_-\|transposase	transposase	H7BUM7	unidentified_phage	2.3e-43	33.6
SNX31143.1\|545639_545927_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31144.1\|545950_546829_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX31145.1\|547230_548076_+	hypothetical protein	NA	NA	NA	NA
SNX31146.1\|548130_548610_-	putative universal stress protein	NA	NA	NA	NA
SNX31147.1\|548688_548973_-	hypothetical protein	NA	NA	NA	NA
SNX31148.1\|549254_550544_-	AAA domain-containing protein	A0A127AWE7	Bacillus_phage	3.8e-103	51.3
SNX31149.1\|550543_551017_-	hypothetical protein	NA	NA	NA	NA
SNX31150.1\|551106_551517_-	hypothetical protein	NA	NA	NA	NA
SNX31151.1\|551553_552300_-	hypothetical protein	NA	NA	NA	NA
SNX31152.1\|552535_553381_-	hypothetical protein	M1Q1P6	Streptococcus_phage	4.9e-14	27.9
SNX31153.1\|554488_554656_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31154.1\|554643_555249_-	30S ribosomal protein S4	NA	NA	NA	NA
SNX31155.1\|555578_557288_+	septation ring formation regulator EzrA	NA	NA	NA	NA
SNX31156.1\|557468_558617_+	NifS/IcsS protein homolog	A0A1X6WFP1	Pacmanvirus	9.2e-32	30.5
SNX31157.1\|558629_559850_+\|tRNA	probable tRNA sulfurtransferase	NA	NA	NA	NA
SNX31158.1\|560238_561444_+	transporter	NA	NA	NA	NA
SNX31159.1\|561546_562689_+	glycerate kinase	W6LM47	Streptococcus_phage	1.0e-38	37.1
SNX31160.1\|563140_564202_+	hypothetical protein	NA	NA	NA	NA
SNX31161.1\|564241_564679_+	hypothetical protein	NA	NA	NA	NA
SNX31162.1\|564970_565375_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31163.1\|565997_566615_+	hypothetical protein	NA	NA	NA	NA
SNX31164.1\|566766_567261_+	probable thiol peroxidase	NA	NA	NA	NA
SNX31165.1\|567566_570221_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.3e-158	42.4
SNX31166.1\|570329_571652_+	folylpolyglutamate synthase	NA	NA	NA	NA
SNX31167.1\|571704_572331_+	hypothetical protein	NA	NA	NA	NA
SNX31168.1\|572493_573504_+	rod shape-determining protein MreB	NA	NA	NA	NA
SNX31169.1\|573622_574474_+	cell shape-determining protein MreC	NA	NA	NA	NA
SNX31170.1\|574489_575023_+	rod shape-determining protein MreD	NA	NA	NA	NA
SNX31171.1\|575499_576147_+	putative amino-acid ABC transporter permease protein	NA	NA	NA	NA
SNX31172.1\|576161_576806_+	putative amino-acid transport ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-32	42.8
SNX31173.1\|576821_577679_+	putative ABC transporter amino-acid-binding protein	NA	NA	NA	NA
SNX31174.1\|577934_579209_+	hypothetical protein	NA	NA	NA	NA
SNX31175.1\|579195_580497_+\|protease	putative zinc protease	NA	NA	NA	NA
SNX31176.1\|580593_581598_+	hypothetical protein	NA	NA	NA	NA
SNX31177.1\|581613_582198_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
SNX31178.1\|582274_583519_+	competence-damage inducible protein CinA	NA	NA	NA	NA
SNX31179.1\|583573_584674_+	protein RecA	A0A0S2MVG1	Bacillus_phage	1.1e-122	63.4
SNX31180.1\|585068_586628_+	ribonuclease Y	NA	NA	NA	NA
SNX31181.1\|586721_589364_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.1e-35	25.0
SNX31182.1\|589380_591324_+	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	1.0e-62	30.1
SNX31183.1\|591377_591980_+	Holliday junction ATP-dependent DNA helicase RuvA	NA	NA	NA	NA
SNX31184.1\|591990_593010_+	Holliday junction ATP-dependent DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.3e-07	29.9
SNX31185.1\|593011_593941_+	hypothetical protein	NA	NA	NA	NA
SNX31186.1\|594011_594434_+	hypothetical protein	NA	NA	NA	NA
SNX31187.1\|594659_595619_+	probable bifunctional oligoribonuclease and PAP phosphatase NrnA	NA	NA	NA	NA
SNX31188.1\|595618_597001_+	DEAD-box ATP-dependent RNA helicase CshB	A0A1V0SIR5	Klosneuvirus	7.1e-47	31.4
SNX31189.1\|597253_599902_+\|tRNA	alanine--tRNA ligase	A0A2K9L3D8	Tupanvirus	3.2e-64	31.5
SNX31190.1\|600111_600375_+	hypothetical protein	NA	NA	NA	NA
SNX31191.1\|600374_600812_+	putative Holliday junction resolvase	NA	NA	NA	NA
SNX31192.1\|600823_601129_+	hypothetical protein	NA	NA	NA	NA
SNX31193.1\|601251_602157_-	ribonuclease HIII	NA	NA	NA	NA
SNX31194.1\|602244_602772_+	hypothetical protein	NA	NA	NA	NA
SNX31195.1\|602783_605165_+	endonuclease MutS2	A0A1V0SC35	Catovirus	1.4e-21	26.5
SNX31196.1\|605237_605552_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	3.8e-12	39.3
SNX31197.1\|605697_606960_+	putative voltage-gated Clc-type chloride channel	NA	NA	NA	NA
SNX31198.1\|607049_607352_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	3.8e-22	53.1
SNX31199.1\|607581_608823_+\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	6.4e-55	37.2

DBSCAN-SWA_8

665228 : 782904

116

Bacillus_phage(11.11%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31252.1\|665228_668021_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	2.4e-78	25.0
SNX31253.1\|668161_668374_+	hypothetical protein	NA	NA	NA	NA
SNX31254.1\|668375_668924_+	hydrolase	NA	NA	NA	NA
SNX31255.1\|669173_669881_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
SNX31256.1\|669880_670225_+	hypothetical protein	NA	NA	NA	NA
SNX31257.1\|670331_671465_+\|tRNA	tRNA-specific 2-thiouridylase	NA	NA	NA	NA
SNX31258.1\|671882_673478_+	metal-dependent amidohydrolase	NA	NA	NA	NA
SNX31259.1\|673585_674518_+	L-2-hydroxyisocaproate dehydrogenase	NA	NA	NA	NA
SNX31260.1\|674726_675383_+	putative phosphatase	NA	NA	NA	NA
SNX31261.1\|675397_676087_+	hypothetical protein	NA	NA	NA	NA
SNX31262.1\|676087_678634_+	ATP-dependent RecD-like DNA helicase	A0A1P8DII4	Virus_Rctr197k	1.2e-31	28.9
SNX31263.1\|678704_679691_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	8.1e-37	33.0
SNX31264.1\|679722_680151_-	putative transcription regulator	NA	NA	NA	NA
SNX31265.1\|680374_681349_-	putative lipid kinase	NA	NA	NA	NA
SNX31266.1\|681608_681824_-	hypothetical protein	NA	NA	NA	NA
SNX31267.1\|681950_682397_+	hypothetical protein	NA	NA	NA	NA
SNX31268.1\|682502_683072_-	peptide deformylase	A0A2I7S809	Vibrio_phage	5.8e-11	41.3
SNX31269.1\|683199_683487_+	hypothetical protein	NA	NA	NA	NA
SNX31270.1\|683490_684255_+	putative inositol-1-monophosphatase	NA	NA	NA	NA
SNX31271.1\|684332_686180_+	GTP-binding protein TypA/BipA homolog	NA	NA	NA	NA
SNX31272.1\|686282_687482_+	putative lipid II flippase FtsW	NA	NA	NA	NA
SNX31273.1\|687468_687765_+	hypothetical protein	NA	NA	NA	NA
SNX31274.1\|687767_688328_+	putative rRNA methyltransferase	NA	NA	NA	NA
SNX31275.1\|688332_688854_+	phosphopantetheine adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.4e-24	38.0
SNX31276.1\|688837_689887_+	hypothetical protein	NA	NA	NA	NA
SNX31277.1\|689958_690627_+	putative ComE operon protein 1	NA	NA	NA	NA
SNX31278.1\|690681_691161_+	comE operon protein 2	A7KUY9	Bacillus_phage	4.1e-34	56.7
SNX31279.1\|691161_693399_+	comE operon protein 3	Q332C0	Clostridium_botulinum_C_phage	4.6e-27	30.6
SNX31280.1\|693416_694445_+	DNA polymerase III subunit delta	NA	NA	NA	NA
SNX31281.1\|694631_695072_-\|transposase	transposase	W5R8L2	Staphylococcus_phage	7.8e-24	40.4
SNX31282.1\|695753_696008_-	30S ribosomal protein S20	NA	NA	NA	NA
SNX31283.1\|696253_696523_+	30S ribosomal protein S15	NA	NA	NA	NA
SNX31284.1\|698215_700015_+	ribonuclease J	NA	NA	NA	NA
SNX31285.1\|700105_701002_+	hypothetical protein	NA	NA	NA	NA
SNX31286.1\|701182_702373_+	elongation factor Tu	A0A1V0SGC3	Hokovirus	8.6e-33	27.8
SNX31287.1\|702544_703852_+	trigger factor	NA	NA	NA	NA
SNX31288.1\|704002_705253_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	8.2e-135	56.9
SNX31289.1\|705266_705860_+	probable GTP-binding protein EngB	NA	NA	NA	NA
SNX31290.1\|705859_706159_+	hypothetical protein	A0A1S7FYY8	Listeria_phage	6.9e-24	51.5
SNX31291.1\|706759_707506_+	arginine transport ATP-binding protein ArtM	G9BWD6	Planktothrix_phage	1.6e-29	37.3
SNX31292.1\|707784_709596_+	UvrABC system protein C	NA	NA	NA	NA
SNX31293.1\|709660_710968_+	GTPase Obg	NA	NA	NA	NA
SNX31294.1\|710994_711927_+	ribonuclease Z	NA	NA	NA	NA
SNX31295.1\|711947_712787_+	oxidoreductase	NA	NA	NA	NA
SNX31296.1\|712859_715157_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.4e-70	29.3
SNX31297.1\|715170_715698_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-30	44.0
SNX31298.1\|716029_716407_+	hypothetical protein	NA	NA	NA	NA
SNX31299.1\|716486_717485_-	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	7.7e-51	36.3
SNX31300.1\|717986_718796_+	putative hydratase	NA	NA	NA	NA
SNX31301.1\|719145_719568_+	transcription regulator	NA	NA	NA	NA
SNX31302.1\|719570_720107_+	putative quinone oxidoreductase	NA	NA	NA	NA
SNX31303.1\|720398_720641_+	hypothetical protein	NA	NA	NA	NA
SNX31304.1\|720847_721156_-	hypothetical protein	NA	NA	NA	NA
SNX31305.1\|721570_722758_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	2.0e-37	29.1
SNX31306.1\|722840_723719_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-42	36.4
SNX31307.1\|723742_724030_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31308.1\|724387_725608_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	1.4e-94	46.0
SNX31309.1\|725917_726226_+\|transposase	putative transposase	A0A0C5AJ29	Paenibacillus_phage	6.9e-11	40.7
SNX31310.1\|726232_727156_-\|transposase	transposase	H7BVY4	unidentified_phage	1.5e-32	31.6
SNX31311.1\|727193_727514_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31312.1\|728096_728462_+	hypothetical protein	NA	NA	NA	NA
SNX31313.1\|728971_729718_+\|transposase	transposase	W5R8L2	Staphylococcus_phage	1.8e-28	34.5
SNX31314.1\|729779_730148_+	hypothetical protein	NA	NA	NA	NA
SNX31315.1\|730273_731383_-	putative MFS-type transporter	NA	NA	NA	NA
SNX31316.1\|731870_732803_+\|transposase	transposase	H7BW61	unidentified_phage	4.2e-27	30.4
SNX31317.1\|733053_734643_-	asparagine synthetase (glutamine-hydrolysing)	A0A0G2Y369	Acanthamoeba_polyphaga_mimivirus	5.6e-104	39.9
SNX31318.1\|735694_736321_+	hypothetical protein	NA	NA	NA	NA
SNX31319.1\|736317_736788_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31320.1\|737022_737967_+	putative 3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
SNX31321.1\|738048_738411_-	hypothetical protein	NA	NA	NA	NA
SNX31322.1\|738499_739489_-	transcription regulator	NA	NA	NA	NA
SNX31323.1\|739510_739957_-	hypothetical protein	A0A1D3SPR3	Enterococcus_phage	2.4e-20	36.7
SNX31324.1\|740058_740679_+	hypothetical protein	NA	NA	NA	NA
SNX31325.1\|741382_741649_+	hypothetical protein	NA	NA	NA	NA
SNX31326.1\|742035_742641_+	hypothetical protein	NA	NA	NA	NA
SNX31327.1\|742856_743633_+	short chain dehydrogenase	NA	NA	NA	NA
SNX31328.1\|743862_744171_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31329.1\|744394_745075_+	L-serine dehydratase, beta chain	NA	NA	NA	NA
SNX31330.1\|745075_745963_+	L-serine dehydratase, alpha chain	NA	NA	NA	NA
SNX31331.1\|745959_746274_+	hypothetical protein	NA	NA	NA	NA
SNX31332.1\|746781_747084_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX31333.1\|747314_748556_+\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX31334.1\|748694_748913_-	hypothetical protein	NA	NA	NA	NA
SNX31335.1\|749149_750334_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
SNX31336.1\|750564_751191_-	LexA repressor	A0A1B2APZ1	Phage_Wrath	3.8e-16	52.9
SNX31337.1\|751346_751598_+	hypothetical protein	NA	NA	NA	NA
SNX31338.1\|751674_751902_+	hypothetical protein	NA	NA	NA	NA
SNX31339.1\|751968_752601_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
SNX31340.1\|752696_753449_+	putative O-methyltransferase	NA	NA	NA	NA
SNX31341.1\|753441_753732_+	hypothetical protein	NA	NA	NA	NA
SNX31342.1\|753885_754665_+	30S ribosomal protein S2	NA	NA	NA	NA
SNX31343.1\|754755_755634_+	elongation factor Ts	NA	NA	NA	NA
SNX31344.1\|755714_756440_+	uridylate kinase	NA	NA	NA	NA
SNX31345.1\|756439_757000_+	ribosome recycling factor	NA	NA	NA	NA
SNX31346.1\|757132_757900_+	Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific)	R9W0U9	Flavobacterium_phage	7.8e-19	35.3
SNX31347.1\|757940_758705_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
SNX31348.1\|758726_759998_+\|protease	zinc metalloprotease	NA	NA	NA	NA
SNX31349.1\|760031_761753_+\|tRNA	proline--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.8e-07	25.9
SNX31350.1\|761892_766236_+	DNA polymerase III PolC-type	A0A0K2SUJ2	Clostridium_phage	1.7e-14	35.3
SNX31351.1\|766627_767107_+	ribosome maturation factor RimP	NA	NA	NA	NA
SNX31352.1\|767126_768353_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
SNX31353.1\|768389_768692_+	hypothetical protein	NA	NA	NA	NA
SNX31354.1\|768684_769008_+	hypothetical protein	NA	NA	NA	NA
SNX31355.1\|769012_771346_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	5.6e-20	24.6
SNX31356.1\|771358_771721_+	ribosome-binding factor A	NA	NA	NA	NA
SNX31357.1\|771790_772687_+\|tRNA	tRNA pseudouridine synthase B	NA	NA	NA	NA
SNX31358.1\|772697_773663_+	riboflavin biosynthesis protein RibC	NA	NA	NA	NA
SNX31359.1\|775458_775941_-\|transposase	putative transposase	Q6J1X2	Lactobacillus_phage	6.7e-85	96.9
SNX31360.1\|776354_776606_-\|transposase	putative transposase	Q6J1X3	Lactobacillus_phage	4.6e-37	95.2
SNX31361.1\|776853_778254_+	amino acid permease	NA	NA	NA	NA
SNX31362.1\|778973_779696_+	ribose 5-phosphate isomerase A	NA	NA	NA	NA
SNX31363.1\|780038_780665_+\|transposase	putative transposase	A0A0C5AJ29	Paenibacillus_phage	7.5e-20	31.0
SNX31364.1\|780650_781529_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX31365.1\|781552_781840_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31366.1\|781828_782059_+	hypothetical protein	NA	NA	NA	NA
SNX31367.1\|782304_782904_+\|transposase	putative transposase	Q8W6R2	Burkholderia_virus	2.0e-09	33.1

DBSCAN-SWA_9

788896 : 851102

unidentified_phage(21.05%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31371.1\|788896_790036_+\|transposase	putative transposase	H7BUM7	unidentified_phage	1.0e-43	33.6
SNX31372.1\|790068_790809_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31373.1\|791210_791837_+\|transposase	putative transposase	H7BW61	unidentified_phage	6.6e-16	33.1
SNX31374.1\|792195_792561_-	hypothetical protein	NA	NA	NA	NA
SNX31375.1\|792686_793733_+	heat-inducible transcription repressor HrcA	NA	NA	NA	NA
SNX31376.1\|793743_794331_+	protein GrpE	NA	NA	NA	NA
SNX31377.1\|794367_796224_+	chaperone protein DnaK	A0A2P1EIW2	Megavirus	3.2e-135	45.4
SNX31378.1\|796335_797487_+	chaperone protein DnaJ	A0A1V0SBY2	Catovirus	8.1e-28	30.5
SNX31379.1\|797829_798441_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
SNX31380.1\|798468_799173_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
SNX31381.1\|799226_799544_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
SNX31382.1\|799545_799866_+	phosphoribosyl-ATP pyrophosphatase	NA	NA	NA	NA
SNX31383.1\|799879_800965_+	histidinol-phosphate aminotransferase	A0A1X6WGT4	Pacmanvirus	2.9e-11	23.1
SNX31384.1\|801032_802865_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	4.3e-23	26.1
SNX31385.1\|803085_804009_-\|transposase	putative transposase	H7BVY4	unidentified_phage	1.3e-31	31.6
SNX31386.1\|804431_804935_-	hypothetical protein	NA	NA	NA	NA
SNX31387.1\|804970_805594_-	putative phosphatase	NA	NA	NA	NA
SNX31388.1\|806968_808042_+	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	5.8e-89	47.9
SNX31389.1\|808053_809229_+	putative D-3-phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	4.2e-88	41.2
SNX31390.1\|809307_809487_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31391.1\|809559_810405_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	1.1e-37	33.2
SNX31392.1\|810470_810758_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31393.1\|811182_812199_-	general stress protein 30	NA	NA	NA	NA
SNX31394.1\|812220_813474_-	putative metabolite transport protein	NA	NA	NA	NA
SNX31395.1\|813699_813903_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31396.1\|813880_814621_-\|transposase	putative transposase	H7BVY4	unidentified_phage	1.4e-17	29.2
SNX31397.1\|814814_815063_-	integral membrane protein	NA	NA	NA	NA
SNX31398.1\|815284_816451_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	8.0e-92	47.6
SNX31399.1\|817411_817954_+	stress response regulator gls24 homolog	NA	NA	NA	NA
SNX31400.1\|817968_818220_+	hypothetical protein	NA	NA	NA	NA
SNX31401.1\|818850_819549_-\|transposase	putative transposase	A0A0C5AJ29	Paenibacillus_phage	2.3e-22	31.7
SNX31402.1\|819576_820353_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31403.1\|820389_820860_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.1e-26	42.9
SNX31404.1\|820852_822046_-	riboflavin biosynthesis protein RibBA	A0A2H4PQS2	Staphylococcus_phage	4.2e-96	48.4
SNX31405.1\|822032_822641_-	riboflavin synthase	A0A2I2L4R9	Orpheovirus	2.8e-19	36.1
SNX31406.1\|822640_823699_-	riboflavin biosynthesis protein RibD	A0A2H4PQS8	Staphylococcus_phage	9.0e-42	34.2
SNX31407.1\|824182_824542_-	hypothetical protein	NA	NA	NA	NA
SNX31408.1\|825252_826425_+	cysteine desulfurase IscS	NA	NA	NA	NA
SNX31409.1\|827874_828477_-	transport protein	NA	NA	NA	NA
SNX31410.1\|828486_829167_-	hypothetical protein	NA	NA	NA	NA
SNX31411.1\|829341_829881_+	peptide-methionine sulfoxide reductase MsrA	NA	NA	NA	NA
SNX31412.1\|830414_831263_+	hypothetical protein	NA	NA	NA	NA
SNX31413.1\|831275_831797_+	peptide methionine sulfoxide reductase MsrA	NA	NA	NA	NA
SNX31414.1\|832405_833491_-	aryl-alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	2.5e-23	26.2
SNX31415.1\|833624_834518_+	transcription regulator	NA	NA	NA	NA
SNX31416.1\|834780_834966_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31417.1\|835085_836000_+	hypothetical protein	NA	NA	NA	NA
SNX31418.1\|836088_836532_+	hypothetical protein	NA	NA	NA	NA
SNX31419.1\|836546_837359_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
SNX31420.1\|837420_838062_-	thiamine-phosphate synthase	NA	NA	NA	NA
SNX31421.1\|838075_838873_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
SNX31422.1\|838874_839660_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
SNX31423.1\|840017_841976_+	hypothetical protein	NA	NA	NA	NA
SNX31424.1\|842241_846378_+	Cas9	NA	NA	NA	NA
SNX31425.1\|846585_847491_+	Cas1	NA	NA	NA	NA
SNX31426.1\|847453_847774_+	Cas2	NA	NA	NA	NA
SNX31427.1\|847770_848442_+	Csn2	NA	NA	NA	NA
SNX31428.1\|849857_851102_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	4.8e-95	46.2

DBSCAN-SWA_10

1000419 : 1046447

Lactobacillus_phage(33.33%)

holin,transposase,integrase

attL 991975:991992|attR 1044328:1044345

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
991975:991992	attL	NA	NA	NA	NA
SNX31567.1\|1000419_1001187_-\|holin	glycine betaine/carnitine/choline transport ATP-binding protein OpuCA	G9BWD6	Planktothrix_phage	4.4e-22	37.1
SNX31568.1\|1001167_1001812_-	putative ABC transport system permease	NA	NA	NA	NA
SNX31569.1\|1001962_1002865_-	putative ABC transporter substrate-binding protein	NA	NA	NA	NA
SNX31570.1\|1003005_1003455_+	transcription regulator	NA	NA	NA	NA
SNX31571.1\|1003492_1003918_-	hypothetical protein	NA	NA	NA	NA
SNX31572.1\|1004532_1004916_-	hypothetical protein	NA	NA	NA	NA
SNX31573.1\|1005128_1005719_-	hypothetical protein	NA	NA	NA	NA
SNX31574.1\|1005833_1006418_-\|integrase	integrase	D2XR58	Bacillus_phage	1.0e-18	34.8
SNX31575.1\|1006750_1007530_-	alpha/beta hydrolase	NA	NA	NA	NA
SNX31576.1\|1007513_1008947_-	protein CitXG	NA	NA	NA	NA
SNX31577.1\|1009698_1010085_-\|transposase	putative transposase	Q8W6R2	Burkholderia_virus	4.9e-06	32.0
SNX31578.1\|1010330_1010681_-	hypothetical protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-12	39.2
SNX31579.1\|1011021_1011267_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31580.1\|1011680_1012139_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31581.1\|1012247_1012445_+	hypothetical protein	NA	NA	NA	NA
SNX31582.1\|1012741_1013125_-	hypothetical protein	NA	NA	NA	NA
SNX31583.1\|1013159_1013981_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
SNX31584.1\|1013990_1015415_+	2-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.8e-69	33.1
SNX31585.1\|1015462_1016656_+	putative MFS-type transporter	NA	NA	NA	NA
SNX31586.1\|1016886_1017957_+	NADP-dependent isopropanol dehydrogenase	E3SJ82	Synechococcus_phage	7.8e-09	25.7
SNX31587.1\|1018184_1019324_-	cystathionine beta-lyase	NA	NA	NA	NA
SNX31588.1\|1019336_1020248_-	cysteine synthase	A0A1X9I5K7	Streptococcus_phage	9.1e-59	40.5
SNX31589.1\|1020588_1020855_+	hypothetical protein	NA	NA	NA	NA
SNX31590.1\|1020864_1022208_+	UPF0210 protein	NA	NA	NA	NA
SNX31591.1\|1022398_1023331_-	hypothetical protein	NA	NA	NA	NA
SNX31592.1\|1023411_1023804_+	hypothetical protein	NA	NA	NA	NA
SNX31593.1\|1023985_1025029_-	hypothetical protein	NA	NA	NA	NA
SNX31594.1\|1025498_1025861_-	hypothetical protein	NA	NA	NA	NA
SNX31595.1\|1025934_1026852_-	putative transporter	NA	NA	NA	NA
SNX31596.1\|1027093_1027678_+	hypothetical protein	A0A0P0IXE0	Lactobacillus_phage	5.1e-39	61.2
SNX31597.1\|1027935_1029789_-	flavoprotein	A0A2P0ZL82	Lactobacillus_phage	9.4e-212	60.9
SNX31598.1\|1029905_1030841_+	transcription regulator	A0A2P0ZL89	Lactobacillus_phage	3.3e-64	43.2
SNX31599.1\|1030938_1031796_+	hypothetical protein	NA	NA	NA	NA
SNX31600.1\|1031890_1033063_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
SNX31601.1\|1033072_1034173_+	hypothetical protein	NA	NA	NA	NA
SNX31602.1\|1034647_1035145_-	hypothetical protein	A0A291I9Q0	Lactobacillus_phage	1.1e-45	54.3
SNX31603.1\|1035157_1036210_-	hypothetical protein	NA	NA	NA	NA
SNX31604.1\|1036206_1037406_-	hypothetical protein	NA	NA	NA	NA
SNX31605.1\|1037421_1037598_-	hypothetical protein	NA	NA	NA	NA
SNX31606.1\|1037605_1038463_-	alpha/beta hydrolase	NA	NA	NA	NA
SNX31607.1\|1038599_1040948_-	hypothetical protein	NA	NA	NA	NA
SNX31608.1\|1041333_1042221_+	putative 3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
SNX31609.1\|1042281_1043169_-	DNA-entry nuclease	NA	NA	NA	NA
SNX31610.1\|1043243_1044602_-	dipeptidase A	NA	NA	NA	NA
1044328:1044345	attR	NA	NA	NA	NA
SNX31611.1\|1044601_1045297_-	hypothetical protein	NA	NA	NA	NA
SNX31612.1\|1046006_1046447_+\|transposase	putative transposase	W5R8L2	Staphylococcus_phage	3.3e-22	39.0

DBSCAN-SWA_11

1069979 : 1090488

unidentified_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31635.1\|1069979_1070267_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31636.1\|1070290_1071169_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX31637.1\|1071200_1071815_-	hypothetical protein	NA	NA	NA	NA
SNX31638.1\|1072030_1073779_-	hypothetical protein	NA	NA	NA	NA
SNX31639.1\|1073840_1074572_-	hypothetical protein	NA	NA	NA	NA
SNX31640.1\|1074776_1075337_+	hypothetical protein	NA	NA	NA	NA
SNX31641.1\|1075956_1076421_-\|transposase	putative transposase	H7BW61	unidentified_phage	1.8e-18	37.7
SNX31642.1\|1076433_1076769_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31643.1\|1077085_1077418_-	hypothetical protein	A0A2H4PQR0	Staphylococcus_phage	3.0e-12	40.9
SNX31644.1\|1077414_1077780_-	hypothetical protein	NA	NA	NA	NA
SNX31645.1\|1077867_1078296_+	putative glyoxalase domain-containing protein	NA	NA	NA	NA
SNX31646.1\|1078370_1078928_+	acetyltransferase	NA	NA	NA	NA
SNX31647.1\|1079202_1080918_+	putative protein kinase	M4QMK7	Micromonas_pusilla_virus	1.4e-28	29.7
SNX31648.1\|1080979_1081678_+	oxidoreductase	NA	NA	NA	NA
SNX31649.1\|1081966_1082884_-	putative sugar kinase	NA	NA	NA	NA
SNX31650.1\|1082955_1083231_+	hypothetical protein	NA	NA	NA	NA
SNX31651.1\|1083257_1083716_-	transcriptional repressor	NA	NA	NA	NA
SNX31652.1\|1084663_1085065_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31653.1\|1086791_1087961_-	hypothetical protein	NA	NA	NA	NA
SNX31654.1\|1088636_1088987_-	hypothetical protein	NA	NA	NA	NA
SNX31655.1\|1089097_1089436_-	hypothetical protein	NA	NA	NA	NA
SNX31656.1\|1089555_1090203_+\|transposase	putative transposase	H7BW61	unidentified_phage	5.9e-12	29.6
SNX31657.1\|1090317_1090488_+\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1202980 : 1294206

Bacillus_phage(20.83%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31763.1\|1202980_1203187_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31764.1\|1203342_1204509_-	MFS-type transporter	NA	NA	NA	NA
SNX31765.1\|1204607_1205003_-	hypothetical protein	NA	NA	NA	NA
SNX31766.1\|1205134_1206058_-\|transposase	putative transposase	H7BVY4	unidentified_phage	3.7e-31	31.0
SNX31767.1\|1206166_1206982_-	putative ABC transporter permease	NA	NA	NA	NA
SNX31768.1\|1206985_1207849_-	putative ABC transporter permease	NA	NA	NA	NA
SNX31769.1\|1207845_1209144_-	putative ABC transporter periplasmic component	NA	NA	NA	NA
SNX31770.1\|1209271_1210411_+	maltodextrin import ATP-binding protein MsmX	G9BWD6	Planktothrix_phage	2.4e-24	35.3
SNX31771.1\|1210999_1211446_+\|transposase	putative transposase	A0A0K2CZ57	Paenibacillus_phage	8.8e-23	52.5
SNX31772.1\|1211543_1211795_+\|transposase	putative transposase	A0A1P8CWQ3	Bacillus_phage	4.6e-13	47.8
SNX31773.1\|1211860_1213000_-\|transposase	putative transposase	H7BUM7	unidentified_phage	5.1e-43	33.3
SNX31774.1\|1213174_1214086_+	putative transcription regulator	NA	NA	NA	NA
SNX31775.1\|1214203_1214830_+	putative carbonic anhydrase	NA	NA	NA	NA
SNX31776.1\|1214884_1217389_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
SNX31777.1\|1217390_1218473_-	carbamoyl-phosphate synthase small chain	NA	NA	NA	NA
SNX31778.1\|1218502_1219417_-	RNA pseudouridine synthase	NA	NA	NA	NA
SNX31779.1\|1219418_1219856_-	lipoprotein signal peptidase	NA	NA	NA	NA
SNX31780.1\|1219855_1220290_-	hypothetical protein	NA	NA	NA	NA
SNX31781.1\|1220302_1220704_+	hypothetical protein	NA	NA	NA	NA
SNX31782.1\|1220859_1221462_-	putative nitroreductase	NA	NA	NA	NA
SNX31783.1\|1221685_1222549_-	probable ABC transporter extracellular-binding protein	NA	NA	NA	NA
SNX31784.1\|1222762_1223452_-	probable amino-acid ABC transporter permease protein	NA	NA	NA	NA
SNX31785.1\|1223538_1223757_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31786.1\|1223753_1224191_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31787.1\|1224370_1225249_-\|transposase	putative transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX31788.1\|1225272_1225560_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31789.1\|1226330_1227800_+	putative amidase	NA	NA	NA	NA
SNX31790.1\|1229480_1230812_+	putative dipeptidase	NA	NA	NA	NA
SNX31791.1\|1231049_1232183_-	putative RNA methyltransferase	NA	NA	NA	NA
SNX31792.1\|1232225_1232675_-	putative Nudix hydrolase	NA	NA	NA	NA
SNX31793.1\|1232678_1233860_-	hypothetical protein	NA	NA	NA	NA
SNX31794.1\|1233967_1235902_-	putative tetracycline resistance protein TetQ	E4ZFJ7	Streptococcus_phage	2.1e-65	30.7
SNX31795.1\|1236554_1236914_-	cell cycle protein GpsB	NA	NA	NA	NA
SNX31796.1\|1237021_1237618_-	UPF0398 protein	NA	NA	NA	NA
SNX31797.1\|1237708_1238344_+	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	8.7e-24	36.6
SNX31798.1\|1238336_1240601_+	penicillin-binding protein 1A	NA	NA	NA	NA
SNX31799.1\|1240707_1241619_-	putative transport protein	NA	NA	NA	NA
SNX31800.1\|1241747_1242761_+	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
SNX31801.1\|1243077_1244085_-	hypothetical protein	NA	NA	NA	NA
SNX31802.1\|1244184_1244913_-	DNA replication protein DnaD	A0A0N7AE27	Bacillus_phage	2.7e-13	43.5
SNX31803.1\|1245004_1246300_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	7.4e-54	29.2
SNX31804.1\|1246326_1246845_-	hypothetical protein	NA	NA	NA	NA
SNX31805.1\|1246895_1249700_-	probable ATP-dependent helicase DinG homolog	A0A1X9I5C8	Streptococcus_phage	1.3e-60	34.6
SNX31806.1\|1249913_1250900_+	mevalonate kinase	NA	NA	NA	NA
SNX31807.1\|1250901_1251891_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
SNX31808.1\|1251910_1253020_+	phosphomevalonate kinase	NA	NA	NA	NA
SNX31809.1\|1253075_1254161_+	isopentenyl-diphosphate delta-isomerase	NA	NA	NA	NA
SNX31810.1\|1254316_1255114_-	phosphate import ATP-binding protein PstB	G9BWD6	Planktothrix_phage	1.5e-12	31.8
SNX31811.1\|1255124_1255976_-	phosphate transport system permease protein PstA	NA	NA	NA	NA
SNX31812.1\|1256001_1256937_-	phosphate transport system permease protein PstC	NA	NA	NA	NA
SNX31813.1\|1256908_1257772_-	phosphate-binding protein PstS	NA	NA	NA	NA
SNX31814.1\|1258281_1259523_-\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	2.2e-55	37.5
SNX31815.1\|1259606_1259750_+	hypothetical protein	NA	NA	NA	NA
SNX31816.1\|1259753_1260056_+\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	6.6e-22	53.1
SNX31817.1\|1260108_1261509_-	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
SNX31818.1\|1261609_1262416_+	hydrolase	NA	NA	NA	NA
SNX31819.1\|1263419_1263869_+	putative resolvase	A0A1V0E035	Clostridioides_phage	5.0e-10	31.9
SNX31820.1\|1265832_1267605_-	oleate hydratase	NA	NA	NA	NA
SNX31821.1\|1268090_1269422_-	oxidoreductase	NA	NA	NA	NA
SNX31822.1\|1269632_1269920_-	hypothetical protein	NA	NA	NA	NA
SNX31823.1\|1270053_1271793_+	pyruvate oxidase	NA	NA	NA	NA
SNX31824.1\|1271987_1272587_-\|transposase	putative transposase	Q8W6R2	Burkholderia_virus	2.0e-09	33.1
SNX31825.1\|1272832_1273063_-	hypothetical protein	NA	NA	NA	NA
SNX31826.1\|1273147_1273498_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31827.1\|1273744_1273993_+	hypothetical protein	NA	NA	NA	NA
SNX31828.1\|1274236_1275253_+\|transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	2.7e-35	33.1
SNX31829.1\|1275409_1276516_-	transporter	NA	NA	NA	NA
SNX31830.1\|1276598_1276988_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31831.1\|1277708_1277936_+\|transposase	putative transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-17	54.2
SNX31832.1\|1278097_1279246_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	7.1e-93	47.5
SNX31833.1\|1279438_1279672_-	hypothetical protein	NA	NA	NA	NA
SNX31834.1\|1280344_1281304_+	putative 2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	2.3e-28	30.9
SNX31835.1\|1281556_1282435_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-42	36.4
SNX31836.1\|1282458_1282746_-\|transposase	putative transposase	NA	NA	NA	NA
SNX31837.1\|1283163_1284303_-\|transposase	putative transposase	H7BUM7	unidentified_phage	7.4e-42	32.8
SNX31838.1\|1284552_1285470_-	dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit	NA	NA	NA	NA
SNX31839.1\|1285482_1288662_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
SNX31840.1\|1288661_1289744_-	carbamoyl-phosphate synthase small chain	R4TGJ8	Halovirus	1.7e-56	35.9
SNX31841.1\|1289745_1291035_-	dihydroorotase	NA	NA	NA	NA
SNX31842.1\|1291034_1292000_-	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.5e-24	29.9
SNX31843.1\|1292334_1293129_-	UPF0317 protein	NA	NA	NA	NA
SNX31844.1\|1293237_1294206_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1308413 : 1347718

Prochlorococcus_phage(22.22%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31855.1\|1308413_1309172_-\|tRNA	tRNA (guanine-N(1)-)-methyltransferase	NA	NA	NA	NA
SNX31856.1\|1309171_1309681_-	ribosome maturation factor RimM	NA	NA	NA	NA
SNX31857.1\|1309835_1310999_-\|transposase	putative transposase	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
SNX31858.1\|1310995_1311262_-\|transposase	putative transposase	A0A1P8BMC0	Lactococcus_phage	3.0e-26	70.9
SNX31859.1\|1311570_1311831_-	hypothetical protein	NA	NA	NA	NA
SNX31860.1\|1311845_1312121_-	30S ribosomal protein S16	NA	NA	NA	NA
SNX31861.1\|1312250_1312955_-	phosphate-specific transport system accessory protein PhoU homolog	NA	NA	NA	NA
SNX31862.1\|1312969_1313725_-	phosphate import ATP-binding protein PstB	G3M9Y6	Bacillus_virus	6.1e-16	29.0
SNX31863.1\|1313737_1314619_-	phosphate transport system permease protein PstA	NA	NA	NA	NA
SNX31864.1\|1314620_1315520_-	phosphate transport system permease protein PstC	NA	NA	NA	NA
SNX31865.1\|1315519_1316395_-	phosphate-binding protein PstS	E3SM63	Prochlorococcus_phage	7.8e-07	28.5
SNX31866.1\|1316677_1317382_+	transcription regulator	NA	NA	NA	NA
SNX31867.1\|1317420_1317981_-	hypothetical protein	NA	NA	NA	NA
SNX31868.1\|1318178_1318361_+	hypothetical protein	NA	NA	NA	NA
SNX31869.1\|1318429_1319380_-	putative divalent cation transporter	NA	NA	NA	NA
SNX31870.1\|1320534_1321626_-	amino acid transporter	NA	NA	NA	NA
SNX31871.1\|1321795_1322098_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31872.1\|1322121_1323000_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	5.2e-43	36.8
SNX31873.1\|1324835_1325672_+\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	7.4e-31	32.1
SNX31874.1\|1325715_1326024_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31875.1\|1326095_1326338_+\|transposase	putative transposase	NA	NA	NA	NA
SNX31876.1\|1326433_1327903_-	signal recognition particle protein	NA	NA	NA	NA
SNX31877.1\|1328089_1328431_-	UPF0122 protein	NA	NA	NA	NA
SNX31878.1\|1328447_1330028_-	signal recognition particle receptor FtsY	NA	NA	NA	NA
SNX31879.1\|1330043_1333607_-	chromosome partition protein Smc	NA	NA	NA	NA
SNX31880.1\|1333620_1334319_-	ribonuclease 3	A0A1V0SDK0	Indivirus	5.8e-21	34.5
SNX31881.1\|1334465_1334711_-	acyl carrier protein	NA	NA	NA	NA
SNX31882.1\|1334753_1335791_-	phosphate acyltransferase	NA	NA	NA	NA
SNX31883.1\|1335803_1337840_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
SNX31884.1\|1337904_1339599_-	hypothetical protein	NA	NA	NA	NA
SNX31885.1\|1339626_1339989_-	hypothetical protein	NA	NA	NA	NA
SNX31886.1\|1340135_1340324_-	50S ribosomal protein L28	NA	NA	NA	NA
SNX31887.1\|1340444_1341104_-	thiamine pyrophosphokinase	NA	NA	NA	NA
SNX31888.1\|1341171_1341825_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
SNX31889.1\|1341836_1342727_-	ribosome biogenesis GTPase RsgA	NA	NA	NA	NA
SNX31890.1\|1342746_1344669_-	serine/threonine-protein kinase	G9BWE0	Planktothrix_phage	9.4e-21	29.6
SNX31891.1\|1344672_1345410_-	protein phosphatase	NA	NA	NA	NA
SNX31892.1\|1345428_1346775_-	ribosomal RNA small subunit methyltransferase B	NA	NA	NA	NA
SNX31893.1\|1346767_1347718_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.5e-11	32.7

DBSCAN-SWA_14

1361754 : 1414643

Lactobacillus_phage(94.59%)

terminase,integrase,protease,tail,holin,head,capsid,transposase,tRNA,portal

attL 1364883:1364901|attR 1408678:1408696

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31909.1\|1361754_1362678_+\|transposase	putative transposase	H7BVY4	unidentified_phage	1.8e-30	31.7
SNX31910.1\|1362754_1363036_-	50S ribosomal protein L27	NA	NA	NA	NA
SNX31911.1\|1363059_1363383_-	hypothetical protein	NA	NA	NA	NA
SNX31912.1\|1363395_1363704_-	50S ribosomal protein L21	NA	NA	NA	NA
SNX31913.1\|1363867_1364509_-	hypothetical protein	NA	NA	NA	NA
1364883:1364901	attL	NA	NA	NA	NA
SNX31914.1\|1367033_1368281_-	putative endolysin	E9LUK3	Lactobacillus_phage	1.7e-220	98.6
SNX31915.1\|1368283_1368751_-\|holin	putative holin	E9LUK2	Lactobacillus_phage	1.1e-65	91.7
SNX31916.1\|1369117_1369906_-	hypothetical protein predicted by Glimmer/Critica	E9LUK0	Lactobacillus_phage	2.9e-29	39.0
SNX31917.1\|1369919_1370990_-	hypothetical protein	NA	NA	NA	NA
SNX31918.1\|1371001_1372138_-	hypothetical protein	D2KRC2	Lactobacillus_phage	1.6e-15	30.5
SNX31919.1\|1372149_1372407_-	hypothetical protein predicted by Glimmer/Critica	E9LUJ7	Lactobacillus_phage	4.7e-21	63.3
SNX31920.1\|1372409_1372586_-	hypothetical protein predicted by Glimmer/Critica	E9LUJ6	Lactobacillus_phage	2.7e-20	93.1
SNX31921.1\|1372582_1376020_-	hypothetical protein	E9LUJ5	Lactobacillus_phage	3.8e-81	43.3
SNX31922.1\|1376023_1378105_-	phage-associated protein/endopeptidase	E9LUJ4	Lactobacillus_phage	0.0e+00	95.7
SNX31923.1\|1378116_1378965_-\|tail	putative phage tail protein	E9LUJ3	Lactobacillus_phage	2.5e-151	94.2
SNX31924.1\|1378972_1383265_-	putative tape measure protein	E9LUJ2	Lactobacillus_phage	0.0e+00	97.2
SNX31925.1\|1383281_1383455_-	hypothetical protein predicted by Glimmer/Critica	E9LUJ1	Lactobacillus_phage	9.5e-26	98.2
SNX31926.1\|1383463_1383808_-	hypothetical protein predicted by Glimmer/Critica	E9LUJ0	Lactobacillus_phage	1.6e-56	94.7
SNX31927.1\|1383872_1384484_-\|tail	major tail protein	E9LUI9	Lactobacillus_phage	7.1e-108	96.1
SNX31928.1\|1384499_1384904_-\|head,tail	head-tail joining protein	E9LUI8	Lactobacillus_phage	1.1e-59	80.6
SNX31929.1\|1384900_1385284_-\|head,tail	head-tail joining protein	E9LUI7	Lactobacillus_phage	6.1e-57	84.3
SNX31930.1\|1385267_1385600_-\|head,tail	head-tail joining protein	E9LUI6	Lactobacillus_phage	6.2e-58	99.1
SNX31931.1\|1385601_1385910_-	DNA-packaging protein	E9LUI5	Lactobacillus_phage	2.1e-52	100.0
SNX31932.1\|1386057_1387176_-\|capsid	phage capsid protein	E9LUI4	Lactobacillus_phage	2.6e-201	98.1
SNX31933.1\|1387193_1387832_-\|head,protease	phage head maturation protease	D2KRA8	Lactobacillus_phage	5.0e-88	97.0
SNX31934.1\|1387764_1389030_-\|portal	phage portal protein	E9LUI2	Lactobacillus_phage	1.4e-238	99.0
SNX31935.1\|1389209_1390919_-\|terminase	bacteriophage terminase large subunit	E9LUI0	Lactobacillus_phage	0.0e+00	98.9
SNX31936.1\|1390915_1391371_-\|terminase	phage terminase small subunit	E9LUH9	Lactobacillus_phage	2.7e-80	99.3
SNX31937.1\|1391542_1392328_-	HNH endonuclease domain protein	E9LUN5	Lactobacillus_phage	4.6e-152	97.7
SNX31938.1\|1392732_1392939_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31939.1\|1393616_1394450_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31940.1\|1394979_1396131_-\|transposase	putative transposase	Q5ULQ4	Lactobacillus_virus	2.3e-152	69.3
SNX31941.1\|1397822_1397981_-	hypothetical protein predicted by Glimmer/Critica	D2KRE6	Lactobacillus_phage	6.4e-21	88.5
SNX31942.1\|1397984_1398803_-	DNA replication protein	E9LUM7	Lactobacillus_phage	9.7e-153	97.8
SNX31943.1\|1398811_1399561_-	DNA replication protein	E9LUM6	Lactobacillus_phage	9.6e-139	97.2
SNX31944.1\|1399575_1400010_-	single-strand binding protein	E9LUM5	Lactobacillus_phage	4.6e-77	99.3
SNX31945.1\|1400010_1400859_-	hypothetical protein	E9LUM4	Lactobacillus_phage	4.1e-170	100.0
SNX31946.1\|1400851_1401850_-	RecT protein	E9LUM3	Lactobacillus_phage	3.3e-171	100.0
SNX31947.1\|1401852_1402062_-	hypothetical protein	E9LUM2	Lactobacillus_phage	2.8e-32	100.0
SNX31948.1\|1402421_1402748_-	hypothetical protein predicted by Glimmer/Critica	E9LUL9	Lactobacillus_phage	2.1e-58	99.1
SNX31949.1\|1403430_1404210_-	phage antirepressor	E9LUL6	Lactobacillus_phage	6.2e-141	95.7
SNX31950.1\|1404614_1404944_+	xre family toxin-antitoxin system	E9LUL4	Lactobacillus_phage	3.2e-46	84.0
SNX31951.1\|1404947_1406021_+	hypothetical protein	NA	NA	NA	NA
SNX31952.1\|1407003_1407516_+	Zn finger protein	E9LUL0	Lactobacillus_phage	2.8e-65	95.3
SNX31953.1\|1407588_1408677_+\|integrase	phage integrase	E9LUK6	Lactobacillus_phage	8.0e-203	99.4
SNX31954.1\|1409238_1409772_-	hypothetical protein	NA	NA	NA	NA
1408678:1408696	attR	NA	NA	NA	NA
SNX31955.1\|1409764_1410733_-	hypothetical protein	NA	NA	NA	NA
SNX31956.1\|1410725_1411619_-	hypothetical protein	NA	NA	NA	NA
SNX31957.1\|1412168_1413521_-	glutamine synthetase	NA	NA	NA	NA
SNX31958.1\|1413719_1414643_-\|tRNA	tRNA dimethylallyltransferase	NA	NA	NA	NA

DBSCAN-SWA_15

1424791 : 1476543

Bacillus_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX31970.1\|1424791_1427230_-\|tRNA	phenylalanine--tRNA ligase beta subunit	NA	NA	NA	NA
SNX31971.1\|1427235_1428282_-\|tRNA	phenylalanine--tRNA ligase alpha subunit	A0A2H4UW22	Bodo_saltans_virus	3.1e-26	36.9
SNX31972.1\|1428572_1428905_-	hypothetical protein	NA	NA	NA	NA
SNX31973.1\|1428924_1429431_-	hypothetical protein	NA	NA	NA	NA
SNX31974.1\|1429544_1430351_-\|tRNA	tRNA/rRNA methylase	NA	NA	NA	NA
SNX31975.1\|1430389_1430668_+	putative acylphosphatase	NA	NA	NA	NA
SNX31976.1\|1430734_1431646_+	membrane protein insertase YidC	NA	NA	NA	NA
SNX31977.1\|1431761_1432172_+	peptide deformylase	A0A2I7S809	Vibrio_phage	5.6e-08	32.5
SNX31978.1\|1432328_1433645_+	putative multidrug export protein	NA	NA	NA	NA
SNX31979.1\|1433809_1435315_-	signal transduction histidine-protein kinase	Q8QNA2	Ectocarpus_siliculosus_virus	2.6e-10	26.5
SNX31980.1\|1435328_1436015_-	response regulator	W8CYM9	Bacillus_phage	2.3e-30	32.4
SNX31981.1\|1436171_1436348_-	50S ribosomal protein L32	NA	NA	NA	NA
SNX31982.1\|1436399_1436951_-	hypothetical protein	NA	NA	NA	NA
SNX31983.1\|1437036_1438164_-	UPF0348 protein	NA	NA	NA	NA
SNX31984.1\|1438164_1438911_-	putative methyltransferase	NA	NA	NA	NA
SNX31985.1\|1438907_1439267_-	ribosomal silencing factor RsfS	NA	NA	NA	NA
SNX31986.1\|1439267_1439879_-	hydrolase	NA	NA	NA	NA
SNX31987.1\|1439871_1440501_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
SNX31988.1\|1440519_1440831_-	RNA-binding protein	NA	NA	NA	NA
SNX31989.1\|1440849_1441974_-	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA
SNX31990.1\|1441957_1442497_-	HAD phosphatase	NA	NA	NA	NA
SNX31991.1\|1442555_1442900_-	hypothetical protein	NA	NA	NA	NA
SNX31992.1\|1443118_1443367_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX31993.1\|1443429_1443783_-	50S ribosomal protein L20	NA	NA	NA	NA
SNX31994.1\|1443832_1444030_-	50S ribosomal protein L35	NA	NA	NA	NA
SNX31995.1\|1444052_1444562_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.1e-12	32.1
SNX31996.1\|1444777_1445722_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	9.5e-27	43.7
SNX31997.1\|1445754_1447116_-	putative replication initiation and membrane attachment protein DnaB	NA	NA	NA	NA
SNX31998.1\|1447115_1447574_-	transcriptional repressor NrdR	NA	NA	NA	NA
SNX31999.1\|1447618_1448239_-	dephospho-CoA kinase	NA	NA	NA	NA
SNX32000.1\|1448231_1449071_-	formamidopyrimidine-DNA glycosylase	F8WPX6	Bacillus_phage	1.8e-24	30.3
SNX32001.1\|1449155_1451906_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	1.2e-56	33.2
SNX32002.1\|1451957_1452707_+	hypothetical protein	NA	NA	NA	NA
SNX32003.1\|1452744_1453515_-	hypothetical protein	NA	NA	NA	NA
SNX32004.1\|1453532_1454906_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
SNX32005.1\|1454874_1455507_-	hypothetical protein	NA	NA	NA	NA
SNX32006.1\|1455630_1455948_-	hypothetical protein	A0A1X9I9P5	Staphylococcus_phage	2.4e-06	30.9
SNX32007.1\|1456123_1456456_+	hypothetical protein	NA	NA	NA	NA
SNX32008.1\|1456662_1457310_-\|tRNA	tRNA (guanine-N(7)-)-methyltransferase	NA	NA	NA	NA
SNX32009.1\|1457327_1458512_-	ABC transporter permease	NA	NA	NA	NA
SNX32010.1\|1458504_1459230_-	ABC-type transporter ATP-binding protein EcsA	A0A2H4PQG7	Staphylococcus_phage	2.4e-22	27.8
SNX32011.1\|1459378_1459807_+	protein hit	NA	NA	NA	NA
SNX32012.1\|1459808_1460042_+	hypothetical protein	NA	NA	NA	NA
SNX32013.1\|1460120_1461098_-	foldase protein PrsA	NA	NA	NA	NA
SNX32014.1\|1461204_1462161_-	3'-5' exoribonuclease	NA	NA	NA	NA
SNX32015.1\|1462312_1462675_-	UPF0342 protein	NA	NA	NA	NA
SNX32016.1\|1462733_1464854_-	penicillin-binding protein 1F	NA	NA	NA	NA
SNX32017.1\|1465815_1466112_+	hypothetical protein	NA	NA	NA	NA
SNX32018.1\|1466126_1467347_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	2.0e-93	46.0
SNX32019.1\|1467641_1468529_-	YihY family inner membrane protein	NA	NA	NA	NA
SNX32020.1\|1468544_1468958_-	hypothetical protein	NA	NA	NA	NA
SNX32021.1\|1469208_1469634_+	hypothetical protein	NA	NA	NA	NA
SNX32022.1\|1470006_1470294_+	hypothetical protein	NA	NA	NA	NA
SNX32023.1\|1470357_1471218_+\|transposase	putative transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-41	36.1
SNX32024.1\|1471307_1472369_-	hypothetical protein	A0A1G5SA08	Enterococcus_phage	4.5e-25	28.7
SNX32025.1\|1472508_1472757_-\|transposase	putative transposase	H7BW47	unidentified_phage	5.6e-11	42.7
SNX32026.1\|1472870_1473569_+\|transposase	putative transposase	A0A0C5AJ29	Paenibacillus_phage	3.1e-22	31.8
SNX32027.1\|1473814_1474414_+\|transposase	putative transposase	Q8W6R2	Burkholderia_virus	2.0e-09	33.1
SNX32028.1\|1474554_1475460_-	hypothetical protein	NA	NA	NA	NA
SNX32029.1\|1476114_1476543_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_16

1499371 : 1565587

Staphylococcus_phage(22.22%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX32053.1\|1499371_1501789_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	66.9
SNX32054.1\|1502150_1502858_+	hypothetical protein	NA	NA	NA	NA
SNX32055.1\|1503116_1504358_-	gamma-glutamyl phosphate reductase	A0A1X9I5D4	Streptococcus_phage	3.8e-108	55.4
SNX32056.1\|1504360_1505152_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.3e-42	38.3
SNX32057.1\|1505434_1506622_-	S-adenosylmethionine synthase	A0A2H4PQS6	Staphylococcus_phage	1.7e-142	67.3
SNX32058.1\|1506816_1507548_+	hypothetical protein	NA	NA	NA	NA
SNX32059.1\|1507641_1508211_-	putative DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
SNX32060.1\|1508216_1509650_-	MFS-type transporter	NA	NA	NA	NA
SNX32061.1\|1509771_1510227_+	peroxide-responsive repressor PerR	NA	NA	NA	NA
SNX32062.1\|1510445_1511813_-	amino-acid permease	NA	NA	NA	NA
SNX32063.1\|1511984_1512143_+	hypothetical protein	NA	NA	NA	NA
SNX32064.1\|1512152_1512770_+	hypothetical protein	NA	NA	NA	NA
SNX32065.1\|1512872_1513382_-	hypothetical protein	NA	NA	NA	NA
SNX32066.1\|1513640_1514432_+	hypothetical protein	NA	NA	NA	NA
SNX32067.1\|1514480_1514912_-	small heat shock protein	NA	NA	NA	NA
SNX32068.1\|1515096_1515627_-	putative acyl-CoA thioester hydrolase	NA	NA	NA	NA
SNX32069.1\|1515933_1516995_-	hypothetical protein	A0A249XZV3	Enterococcus_phage	1.5e-20	71.2
SNX32070.1\|1517425_1518763_-	putative purine permease	Q9KX94	Enterobacteria_phage	7.2e-20	28.8
SNX32071.1\|1518914_1519787_-	hypothetical protein	NA	NA	NA	NA
SNX32072.1\|1519795_1520377_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	A0A0C5K925	Enterococcus_phage	4.8e-53	59.7
SNX32073.1\|1520321_1522532_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.7e-247	58.8
SNX32074.1\|1522904_1523588_-	polar amino acid ABC transporter permease	NA	NA	NA	NA
SNX32075.1\|1523610_1524432_-	polar amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
SNX32076.1\|1525167_1525464_+	hypothetical protein	NA	NA	NA	NA
SNX32077.1\|1525479_1525725_+	hypothetical protein	NA	NA	NA	NA
SNX32078.1\|1525806_1526247_-\|transposase	putative transposase	W5R8L2	Staphylococcus_phage	7.8e-24	40.4
SNX32079.1\|1533253_1533502_-	hypothetical protein	NA	NA	NA	NA
SNX32080.1\|1533822_1534842_-	hypothetical protein	NA	NA	NA	NA
SNX32081.1\|1534843_1535869_-	alpha-galactosylglucosyldiacylglycerol synthase	NA	NA	NA	NA
SNX32082.1\|1535861_1537079_-	alpha-monoglucosyldiacylglycerol synthase	NA	NA	NA	NA
SNX32083.1\|1537294_1539025_-	phosphoenolpyruvate-protein phosphotransferase	NA	NA	NA	NA
SNX32084.1\|1539026_1539293_-	phosphocarrier protein HPr	NA	NA	NA	NA
SNX32085.1\|1539422_1539647_-	hypothetical protein	NA	NA	NA	NA
SNX32086.1\|1539838_1542085_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpE	K4FB40	Cronobacter_phage	2.9e-122	40.6
SNX32087.1\|1542306_1543014_+	hypothetical protein	NA	NA	NA	NA
SNX32088.1\|1543140_1543716_+	uncharacterized isochorismatase family protein PncA	NA	NA	NA	NA
SNX32089.1\|1543708_1545136_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	5.9e-97	44.5
SNX32090.1\|1545657_1546251_-	hypothetical protein	NA	NA	NA	NA
SNX32091.1\|1546407_1547127_+	hypothetical protein	NA	NA	NA	NA
SNX32092.1\|1547137_1547926_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.3e-24	33.7
SNX32093.1\|1548105_1548801_+	hypothetical protein	NA	NA	NA	NA
SNX32094.1\|1548882_1550124_+	D-aspartate ligase	NA	NA	NA	NA
SNX32095.1\|1550500_1551823_+	hypothetical protein	NA	NA	NA	NA
SNX32096.1\|1551943_1553131_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	2.2e-36	28.8
SNX32097.1\|1553667_1554366_-	hypothetical protein	NA	NA	NA	NA
SNX32098.1\|1554378_1555239_-	putative ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.4e-16	27.7
SNX32099.1\|1555225_1555603_-	putative transcription regulator	NA	NA	NA	NA
SNX32100.1\|1555711_1556644_-	dTDP-glucose 4,6-dehydratase	M1H4P8	Acanthocystis_turfacea_Chlorella_virus	1.1e-56	39.9
SNX32101.1\|1556704_1557691_-	hypothetical protein	NA	NA	NA	NA
SNX32102.1\|1557692_1559432_-	hypothetical protein	NA	NA	NA	NA
SNX32103.1\|1559442_1561023_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	2.2e-31	26.9
SNX32104.1\|1561164_1562130_-	glycosyltransferase	A8CG95	Salmonella_phage	2.8e-50	37.0
SNX32105.1\|1562777_1563149_+\|transposase	putative transposase	A0A0N9SHJ4	Paenibacillus_phage	2.0e-28	53.1
SNX32106.1\|1563121_1563553_+\|transposase	putative transposase	NA	NA	NA	NA
SNX32107.1\|1563695_1565120_-	hypothetical protein	NA	NA	NA	NA
SNX32108.1\|1565155_1565587_-\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_17

1614332 : 1634195

Bacillus_phage(20.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX32160.1\|1614332_1614833_-\|tRNA	putative prolyl-tRNA editing protein	NA	NA	NA	NA
SNX32161.1\|1616085_1617483_+	Na(+)/H(+) antiporter NhaC	NA	NA	NA	NA
SNX32162.1\|1617938_1618979_-	oxidoreductase	NA	NA	NA	NA
SNX32163.1\|1619640_1620555_+	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX32164.1\|1621042_1622164_+	PTS system EIIC	NA	NA	NA	NA
SNX32165.1\|1622312_1622600_+	hypothetical protein	NA	NA	NA	NA
SNX32166.1\|1622665_1623493_+\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	2.8e-38	34.0
SNX32167.1\|1624364_1624907_+	stress response regulator gls24 homolog	NA	NA	NA	NA
SNX32168.1\|1624921_1625173_+	hypothetical protein	NA	NA	NA	NA
SNX32169.1\|1625549_1626473_+\|transposase	putative transposase	H7BVY4	unidentified_phage	3.3e-32	31.6
SNX32170.1\|1626818_1627418_-\|transposase	putative transposase	Q8W6R2	Burkholderia_virus	4.4e-09	31.5
SNX32171.1\|1627663_1628362_-\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	1.4e-22	31.7
SNX32172.1\|1628749_1629475_+\|transposase	putative transposase	NA	NA	NA	NA
SNX32173.1\|1629608_1630379_+	HAD family hydrolase	NA	NA	NA	NA
SNX32174.1\|1630367_1630571_-	hypothetical protein predicted by Glimmer/Critica	NA	NA	NA	NA
SNX32175.1\|1630589_1633307_-	trehalose-6-phosphate phosphorylase	NA	NA	NA	NA
SNX32176.1\|1633658_1634195_-\|transposase	transposase	Q6J1X2	Lactobacillus_phage	1.1e-96	97.2

DBSCAN-SWA_18

1783823 : 1802616

Streptococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX32323.1\|1783823_1783973_-\|transposase	putative transposase	NA	NA	NA	NA
SNX32324.1\|1784008_1784287_+\|transposase	putative transposase	NA	NA	NA	NA
SNX32325.1\|1784399_1785527_-	modification methylase	M1PSQ0	Streptococcus_phage	3.8e-30	30.2
SNX32326.1\|1785658_1787275_-	hypothetical protein	NA	NA	NA	NA
SNX32327.1\|1787363_1787909_-	putative transcription regulator	NA	NA	NA	NA
SNX32328.1\|1788082_1789093_-\|transposase	putative transposase	A0A0P0ICY9	Lactobacillus_phage	2.5e-97	55.3
SNX32329.1\|1789256_1789664_-\|transposase	putative transposase	A0A286QN76	Streptococcus_phage	4.4e-45	62.1
SNX32330.1\|1791349_1791580_-	hypothetical protein	NA	NA	NA	NA
SNX32331.1\|1791889_1792618_+	hypothetical protein	NA	NA	NA	NA
SNX32332.1\|1792720_1792954_+	hypothetical protein	NA	NA	NA	NA
SNX32333.1\|1793393_1793690_+\|transposase	putative transposase	NA	NA	NA	NA
SNX32334.1\|1793902_1794913_-	putative nickel transport protein	NA	NA	NA	NA
SNX32335.1\|1794941_1795769_-	hypothetical protein	NA	NA	NA	NA
SNX32336.1\|1795793_1796504_-	putative glycerol uptake facilitator protein	NA	NA	NA	NA
SNX32337.1\|1796505_1797870_-	UPF0272 protein	NA	NA	NA	NA
SNX32338.1\|1797869_1798628_-	hypothetical protein	A0A288TYA6	Enterococcus_phage	3.7e-21	47.2
SNX32339.1\|1798635_1799991_-	hypothetical protein	NA	NA	NA	NA
SNX32340.1\|1800159_1800831_+	putative transcription regulator	NA	NA	NA	NA
SNX32341.1\|1801383_1802616_+\|transposase	putative transposase	NA	NA	NA	NA

DBSCAN-SWA_19

1806003 : 1883703

Streptococcus_phage(15.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX32344.1\|1806003_1807254_-\|transposase	putative transposase	A0A286QQE5	Streptococcus_phage	4.5e-56	37.0
SNX32345.1\|1807332_1807785_+\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	2.1e-32	51.5
SNX32346.1\|1807858_1808557_-	putative HAD-hydrolase	NA	NA	NA	NA
SNX32347.1\|1808566_1809622_-	aspartate--ammonia ligase	NA	NA	NA	NA
SNX32348.1\|1809778_1810366_+	putative muramidase	A0A0A7RUS8	Clostridium_phage	1.5e-22	42.8
SNX32349.1\|1810384_1810906_+	hypothetical protein	NA	NA	NA	NA
SNX32350.1\|1811167_1812724_+	putative DNA polymerase V	O64031	Bacillus_phage	3.3e-32	25.3
SNX32351.1\|1812720_1813179_+	hypothetical protein	NA	NA	NA	NA
SNX32352.1\|1814258_1814975_+	putative allophanate hydrolase subunit 1	NA	NA	NA	NA
SNX32353.1\|1814975_1815992_+	putative urea carboxylase	NA	NA	NA	NA
SNX32354.1\|1815994_1816423_+	biotin carboxyl carrier protein of acetyl-CoA carboxylase	NA	NA	NA	NA
SNX32355.1\|1816394_1817783_+	biotin carboxylase	NA	NA	NA	NA
SNX32356.1\|1817769_1818519_+	UPF0271 protein	NA	NA	NA	NA
SNX32357.1\|1818531_1819743_+	uncharacterized membrane protein	NA	NA	NA	NA
SNX32358.1\|1819834_1821004_-	MFS-type transporter	NA	NA	NA	NA
SNX32359.1\|1821463_1822795_-	putative glutathione reductase	A0A2K5B2C5	Erysipelothrix_phage	6.3e-24	25.1
SNX32360.1\|1823072_1823387_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	6.8e-14	39.6
SNX32361.1\|1823534_1824461_+	putative transport protein	NA	NA	NA	NA
SNX32362.1\|1824726_1826079_-	aminotransferase	A0A1V0SKB7	Klosneuvirus	2.6e-17	23.6
SNX32363.1\|1826059_1827514_-	amino acid permease	NA	NA	NA	NA
SNX32364.1\|1828438_1829269_-	hypothetical protein	NA	NA	NA	NA
SNX32365.1\|1829540_1829897_+	putative acetyltransferase	NA	NA	NA	NA
SNX32366.1\|1830119_1831502_-	argininosuccinate lyase	NA	NA	NA	NA
SNX32367.1\|1831501_1832791_-	argininosuccinate synthase	NA	NA	NA	NA
SNX32368.1\|1833000_1834878_-	hypothetical protein	NA	NA	NA	NA
SNX32369.1\|1835041_1835743_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-35	41.3
SNX32370.1\|1835764_1838314_+	putative ABC transporter permease	NA	NA	NA	NA
SNX32371.1\|1838406_1839456_-	hypothetical protein	NA	NA	NA	NA
SNX32372.1\|1839638_1841624_-	ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	7.1e-32	38.3
SNX32373.1\|1841680_1842379_+	putative transcription regulator	NA	NA	NA	NA
SNX32374.1\|1844812_1845133_-	UPF0145 protein	NA	NA	NA	NA
SNX32375.1\|1845218_1846073_-	putative arginase	NA	NA	NA	NA
SNX32376.1\|1846069_1847020_-	putative nitronate monooxygenase	NA	NA	NA	NA
SNX32377.1\|1847088_1847409_-	hypothetical protein	NA	NA	NA	NA
SNX32378.1\|1847456_1848029_-	hypothetical protein	NA	NA	NA	NA
SNX32379.1\|1848065_1849148_-	hypothetical protein	NA	NA	NA	NA
SNX32380.1\|1852855_1855198_-	putative nitric-oxide reductase large subunit	NA	NA	NA	NA
SNX32381.1\|1855858_1857412_-	GMP synthase [glutamine-hydrolysing]	A0A1V0SH76	Hokovirus	1.7e-17	28.6
SNX32382.1\|1857726_1858338_+	hypothetical protein	NA	NA	NA	NA
SNX32383.1\|1858351_1859023_+	response regulator	W8CYM9	Bacillus_phage	1.2e-18	29.1
SNX32384.1\|1859035_1860289_+	putative sensor histidine kinase	NA	NA	NA	NA
SNX32385.1\|1860700_1861876_-\|transposase	putative transposase	A0A0P0ICY9	Lactobacillus_phage	2.0e-114	54.9
SNX32386.1\|1861875_1862292_-\|transposase	putative transposase	A0A286QN76	Streptococcus_phage	6.4e-44	60.6
SNX32387.1\|1862455_1863397_-	pantothenate kinase	NA	NA	NA	NA
SNX32388.1\|1863489_1864041_+	hypothetical protein	NA	NA	NA	NA
SNX32389.1\|1864266_1865016_-	short-chain dehydrogenase	NA	NA	NA	NA
SNX32390.1\|1865304_1867398_-	lipoteichoic acid synthase	W6LM83	Streptococcus_phage	6.8e-150	45.1
SNX32391.1\|1867589_1868537_+	hypothetical protein	NA	NA	NA	NA
SNX32392.1\|1868749_1871044_-	helicase IV	NA	NA	NA	NA
SNX32393.1\|1871226_1871883_+	membrane protein	NA	NA	NA	NA
SNX32394.1\|1872007_1872652_+	putative histidine phosphatase superfamily protein	NA	NA	NA	NA
SNX32395.1\|1872673_1873951_+	GTPase HflX	NA	NA	NA	NA
SNX32396.1\|1874122_1875229_+	o-succinylbenzoate synthase	NA	NA	NA	NA
SNX32397.1\|1875293_1876016_-	nicotinamide riboside transporter PnuC	G3BLP7	Salmonella_phage	1.5e-11	24.3
SNX32398.1\|1876364_1877963_-	probable amino acid-proton symporter	NA	NA	NA	NA
SNX32399.1\|1878033_1878498_-\|transposase	putative transposase	A0A0P0IQC6	Lactobacillus_phage	3.6e-35	52.5
SNX32400.1\|1878580_1879909_+\|transposase	putative transposase	A0A288TXV8	Enterococcus_phage	3.7e-61	37.6
SNX32401.1\|1880005_1881145_+\|transposase	putative transposase	H7BUM7	unidentified_phage	1.6e-44	34.4
SNX32402.1\|1881537_1882527_-	D-lactate dehydrogenase	M1H9J0	Paramecium_bursaria_Chlorella_virus	3.4e-43	34.0
SNX32403.1\|1882590_1883703_-	UDP-N-acetylglucosamine 2-epimerase	A0A1V0SAG5	Catovirus	3.5e-28	32.2

DBSCAN-SWA_20

2045197 : 2054285

Brazilian_cedratvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
SNX32543.1\|2045197_2046136_+	putative D-3-phosphoglycerate dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	3.5e-29	32.9
SNX32544.1\|2046137_2046620_+	transcription elongation factor GreA	NA	NA	NA	NA
SNX32545.1\|2046695_2047631_+	hypothetical protein	A0A0C5K6M3	Enterococcus_phage	1.2e-26	33.6
SNX32546.1\|2047736_2048246_-	macro domain-containing protein	A0A0K1L687	Scale_drop_disease_virus	1.1e-37	50.6
SNX32547.1\|2048254_2050159_-	neutral endopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	4.8e-70	29.5
SNX32548.1\|2050295_2051606_-	guanine/hypoxanthine permease	A0A0R6PHV4	Moraxella_phage	1.4e-47	33.7
SNX32549.1\|2051703_2051988_-	hypothetical protein	NA	NA	NA	NA
SNX32550.1\|2051989_2053150_-	hypothetical protein	NA	NA	NA	NA
SNX32551.1\|2053142_2054285_-	hypothetical protein	A0A141HRX4	Bacillus_phage	1.7e-22	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. LT906621

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection