CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP036499	Vibrio cholerae strain 20000 chromosome 1, complete sequence	2 crisprs	DinG,DEDDh,cas3,csx1,csa3,cas6f,cas7f,cas5f	0	2	3	0
CP036500	Vibrio cholerae strain 20000 chromosome 2, complete sequence	1 crisprs	RT,csa3,cas3	0	0	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP036499_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036499_1

438056-438299

Orphan

Consensus_repeat	Method
AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	PILER-CR

2 spacers

The CRISPR arrays of CP036499_1

>merge|CP036499|1|438056-438299|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAATTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCACTATTAAAAGTTGTGCCATAGACACAATAAAAATTGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

>CP036499|1|1|438056-438299|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGG	TCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAA
TTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTG	TCGGTGGTTCGATTCCGCCTCGAGGCACCACTATTAAAAGTTGTGCCATAGACACAATAAAAAT
TGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

Protein	Signature genes	Signature genes Name	Protein_function
CP036499.1\|QBJ28195.1\|444677_445973_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP036499.1\|QBJ28194.1\|442261_444625_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP036499.1\|QBJ28193.1\|441260_442115_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP036499.1\|QBJ28186.1\|431847_433023_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
CP036499.1\|QBJ28188.1\|434289_435009_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
CP036499.1\|QBJ28192.1\|438588_440214_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
CP036499.1\|QBJ28184.1\|430750_431182_+\|DUF4426-domain-containing-protein	unknown	unknown	gnl\|CDD\|379616
CP036499.1\|QBJ28182.1\|429857_430415_+\|YggT-family-protein	unknown	unknown	gnl\|CDD\|223833
CP036499.1\|QBJ28196.1\|445962_446955_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP036499.1\|QBJ28200.1\|449030_449234_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ28190.1\|436323_436596_+\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
CP036499.1\|QBJ28198.1\|447855_448236_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP036499.1\|QBJ28199.1\|448246_449056_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
CP036499.1\|QBJ28185.1\|431251_431854_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
CP036499.1\|QBJ28197.1\|446968_447784_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
CP036499.1\|QBJ28187.1\|433258_434179_-\|glutaminase	unknown	unknown	gnl\|CDD\|234880
CP036499.1\|QBJ28201.1\|449205_449703_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
CP036499.1\|QBJ28191.1\|436697_437825_+\|membrane-bound-lytic-murein-transglycosylase-MltC	unknown	unknown	gnl\|CDD\|183271
CP036499.1\|QBJ28189.1\|435248_436310_+\|adenine-DNA-glycosylase	unknown	unknown	gnl\|CDD\|182805
CP036499.1\|QBJ28183.1\|430414_430705_+\|YggU-family-protein	unknown	unknown	gnl\|CDD\|179931

Protein	Function_ID	Function_description	E-value
CP036499.1\|QBJ28195.1\|444677_445973_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	7.03873e-157
CP036499.1\|QBJ28194.1\|442261_444625_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP036499.1\|QBJ28193.1\|441260_442115_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.60415e-153
CP036499.1\|QBJ28186.1\|431847_433023_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
CP036499.1\|QBJ28188.1\|434289_435009_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.57395e-111
CP036499.1\|QBJ28192.1\|438588_440214_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	4.66474e-58
CP036499.1\|QBJ28184.1\|430750_431182_+\|DUF4426-domain-containing-protein	gnl\|CDD\|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	6.80534e-67
CP036499.1\|QBJ28182.1\|429857_430415_+\|YggT-family-protein	gnl\|CDD\|223833	COG0762, COG0762, Predicted integral membrane protein [Function unknown].	4.81328e-12
CP036499.1\|QBJ28196.1\|445962_446955_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP036499.1\|QBJ28190.1\|436323_436596_+\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	5.47988e-59
CP036499.1\|QBJ28198.1\|447855_448236_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	8.82639e-75
CP036499.1\|QBJ28199.1\|448246_449056_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	1.60073e-170
CP036499.1\|QBJ28185.1\|431251_431854_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	3.35577e-127
CP036499.1\|QBJ28197.1\|446968_447784_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.27746e-146
CP036499.1\|QBJ28187.1\|433258_434179_-\|glutaminase	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0
CP036499.1\|QBJ28201.1\|449205_449703_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	8.81354e-92
CP036499.1\|QBJ28191.1\|436697_437825_+\|membrane-bound-lytic-murein-transglycosylase-MltC	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	5.61194e-156
CP036499.1\|QBJ28189.1\|435248_436310_+\|adenine-DNA-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
CP036499.1\|QBJ28183.1\|430414_430705_+\|YggU-family-protein	gnl\|CDD\|179931	PRK05090, PRK05090, hypothetical protein; Validated.	8.99926e-60

>CP036499.1|QBJ28191.1|436697_437825_+|membrane-bound-lytic-murein-transglycosylase-MltC
MRKLVLCITALLLSGCSREFIEKIYDVDYEPTNRFAKNLAELPGQFQKDTAALDALINSFSGNIEKRWGRRELKIAGKNNYVKYIDNYLSRSEVNFTEGRIIVETVSPIDPKAHLRNAIITTLLTPDDPAHVDLFSSKDIELKGQPFLYQQVLDQDGQPIQWSWRANRYADYLIANHLKVKLVDFKKAYYVEIPMVKDQIDIRGYKYASIVRKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKNRSGEPSPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPTSLEYSMISAYNGGTGGVLSTFSSDRQRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKKEFNAG
>CP036499.1|QBJ28190.1|436323_436596_+|oxidative-damage-protection-protein
MARTVFCTRLQKEADGLDFQLYPGELGKRIFDNICKEAWAQWQTKQTMLINEKKLNMMDPEHRKLLEQEMVNFLFEGKEVHIEGYTPPAK
>CP036499.1|QBJ28189.1|435248_436310_+|adenine-DNA-glycosylase
MTPFAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDITPILLQLSRKPDIVMEGSKGLWYNLSQPDEIGLAAPVKQLLHSLPFDIDSHI
>CP036499.1|QBJ28188.1|434289_435009_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSEVITQEYTEDGKVLRRIRSFVRREGRLTKGQEAAMKECWPTMGIDYQPELLDWQQVFGNDNPVVLEIGFGMGASLVEMAKNAPEKNFLGIEVHSPGVGACLASAREAGVTNLRVMCHDAVEVFAHMIPDNSLHTLQLFFPDPWHKKRHHKRRIVQLEFAEMVRQKLIIGSGVFHMATDWENYAEHMIEVMNQAPGFANLATDGDYIPRPDERPLTKFEQRGHRLGHGVWDIKYQRTA
>CP036499.1|QBJ28187.1|433258_434179_-|glutaminase
MKPTAEILASIIEEVRPLTGQGKVADYIPALAKVPSEKLGIAVFTNQGEVITAGDAQEGFSIQSISKVLSLTLAMGLYQPDELWSRVGKEPSGQAFNSLIQLEMEQGIPRNPFINAGAIVVCDMLQSRLSAPRQRLLEFVRQLSGEPLIAYDKVVAASEMMHSDRNAAIAYLMRSFGNFHNEVIPVLHNYFHACALKMSCVELAKTFSYLANKGVSVVTGETVITPTQSKQTNALLATCGLYDGAGEFAYRVGMPGKSGVGGGIIAVVPGEMTIAVWSPALDQSGNSLAGTRALELLAQRIGRSIF
>CP036499.1|QBJ28186.1|431847_433023_+|radical-SAM-family-heme-chaperone-HemW
MLTPPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGDPRLLHSIFIGGGTPSLISAEGIARLLQGVAKRIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFEPEKLARLGRIHGQQEAVRATQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLSWYQLTIEPNTLFYSKPPKLPDEDALWDIFELGHQKLSDAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWSLSEGYLSEDDQHWQITEKGKLFLNDLLEAFMADEEE
>CP036499.1|QBJ28185.1|431251_431854_+|XTP/dITP-diphosphatase
MKKIVLATGNQGKVREMADLLSDFGFDVVAQSEFNVPEAAETGTTFIENAIIKARHAAQITGLPAIADDSGLEVDYLNGAPGIYSARYAGEHASDGDNLNKLLVAMQDVPDDQRSARFHCVLVLMRHADDPTPIVCHGKWEGKILTAPHGSNGFGYDPIFWVPEENCASAELEPVRKKQLSHRGKALQKLFKAIEEQRTC
>CP036499.1|QBJ28184.1|430750_431182_+|DUF4426-domain-containing-protein
MRKWMMSLLLTLLALPASAEQQKTIKDIEVHYSAFNSTFLTPKVASSYQLTRNGYTAILNISVLDRASLGKPATEAKLTGHAKNLIGNLRELSFKQVKEGNAIYYLAEVPISNEEMLTFDIDVDAGLKGAGKLTFSQKFYTEQ
>CP036499.1|QBJ28183.1|430414_430705_+|YggU-family-protein
MAAAWREGDDLLLRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVVIEKGELGRHKQVRILQPSQIPAEITALIE
>CP036499.1|QBJ28182.1|429857_430415_+|YggT-family-protein
MNSLSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLATIVFAYVLCVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRIIPIMGGFDLSILVLFIVLQFANFLMGDVIGPIWYQL
>CP036499.1|QBJ28192.1|438588_440214_+|methyl-accepting-chemotaxis-protein
MKLKTQAYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFAIQAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEVTR
>CP036499.1|QBJ28193.1|441260_442115_-|co-chaperone-DjlA
MHIFGKILGAFFGFLFGGPFGAIFGIFLGHQFDKARRLNQAGFQSGTFGAGPSQAERQEEFFKSAFSVMGHVAKAKGQVTKEEIQLATIMMDRMNLTLEQKRAAQDAFRDGKESDFPLEQVLERVKIATGGRFDLLQFFLELQVSSAFADGDVHPSERQVLHRIARGLGFSSEQLERRLRMQEAAFRFQQGGGFGGSQQQSHSGQQWQQPSSRHQLADAYEVLGVSESASAQEVKRAYRKLMNEHHPDKLMAKGLPPEMMNVAKEKSQQIQHAYELIRKEKGIK
>CP036499.1|QBJ28194.1|442261_444625_+|LPS-assembly-protein-LptD
MYNPMSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSCPDGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQLHTELGDRWAFQYEHNGIYQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLFDDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEWLANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNIGIIGFGTSIGAGSSMTGVDSAGNSLGYGRPFFLNN
>CP036499.1|QBJ28195.1|444677_445973_+|peptidylprolyl-isomerase-SurA
MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASIAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVEVLKDEKDEQ
>CP036499.1|QBJ28196.1|445962_446955_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MSSKRIIVTAGEPAGIGPDLVLALSAQDWPHQLVVCADKALLAQRATQLGIQVKLLDYQRDNPVQAQQAGTLLVEHIPLAEPVVAGQLNPANGHYVLKTLERAAKGCMNGEFDAIVTGPVHKGVINRAGVAFSGHTEFFAEQSKTPLVVMMLATEGLRTALVTTHLPLAEVPQAITCERLEQIVHILHKDLVEKFAIAEPKIYVCGLNPHAGEDGVLGMEEIETITPTLQRLREQYGMQLVGPLPADTIFSEKYLQQADAVLGMYHDQVLPVLKYKGFGRSVNITLGLPFIRTSVDHGTALDLAGTGQADAGSFWTALAYAIELVDKKAQ
>CP036499.1|QBJ28197.1|446968_447784_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMRPENLTLAQFVALANWLDATHKTHA
>CP036499.1|QBJ28198.1|447855_448236_+|Co2+/Mg2+-efflux-protein-ApaG
MDVSLPCIKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALETPVGVMQGQYLMIDEQGESFTVEIEPFRLAVPHVLN
>CP036499.1|QBJ28199.1|448246_449056_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MANYIVGDIQGCFDELQQLLKQAEFNSQLDTLWFAGDLVARGPKSLETLRFVYQLGDAARVVLGNHDLHLLSVALGHHPAKRRDQTQAILDAPDAAPLLDWLRQQPLLAEHQEFVLCHAGISPQWDLATARQAAQEVESVLRSPEWSTLIEQMYSDQPDAWHPTLQGIDRLRYIVNAFTRMRFCFPDGRLDMQCKLPPQEVTDGSLLPWFQLPQRIALEKTVIFGHWAALEGYVSETVIGLDTGCVWGGTLTMLRWEDKHYFSQAALPA
>CP036499.1|QBJ28200.1|449030_449234_-|hypothetical-protein
MNANIPFLRDVAAVLAVQIGSIHICHLFCRLPATPRRLGIVIAGIVRANALNTLIHGCCFMLAALLG
>CP036499.1|QBJ28201.1|449205_449703_-|type-3-dihydrofolate-reductase
MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSIEAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLEGDTQFPEWGSDWLERFREHYPADEKNAYGMDFVIFERQYPLPT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP036499_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036499_2

2766372-2766518

TypeI-A

Consensus_repeat	Method
TTCTTGGCTGCCTATTCGGCAGAACAC	CRISPRCasFinder

2 spacers

csa3,cas6f,cas7f,cas5f

The CRISPR arrays of CP036499_2

>merge|CP036499|2|2766372-2766518|CRISPRCasFinder
TTCTTGGCTGCCTATTCGGCAGAACACGGAAAAATGGGGAAGTAGTTCGCAGTTATGACTTTCTTGGCTGCCTATTCGGCAGAACACCGAGGTAGGCGTCTACCTCTGCGCGGCTGCGTTTTCTTGGCTGCCTATTCGGCAGAACAC

>CP036499|2|1|2766372-2766518|CRISPRCasFinder
TTCTTGGCTGCCTATTCGGCAGAACAC	GGAAAAATGGGGAAGTAGTTCGCAGTTATGACT
TTCTTGGCTGCCTATTCGGCAGAACAC	CGAGGTAGGCGTCTACCTCTGCGCGGCTGCGTT
TTCTTGGCTGCCTATTCGGCAGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP036499.1\|QBJ30199.1\|2759190_2760447_-\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|176454
CP036499.1\|QBJ30207.1\|2767264_2768296_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09737_cas7f_CAS-I-F	gnl\|CDD\|187868
CP036499.1\|QBJ30206.1\|2766614_2767253_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
CP036499.1\|QBJ30198.1\|2755094_2758904_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238697
CP036499.1\|QBJ30202.1\|2762211_2763273_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ30211.1\|2772844_2774491_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275228
CP036499.1\|QBJ30197.1\|2754140_2754482_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|236654
CP036499.1\|QBJ30200.1\|2760446_2760854_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
CP036499.1\|QBJ30210.1\|2771978_2772845_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ30201.1\|2761147_2762167_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
CP036499.1\|QBJ30204.1\|2765022_2765337_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ30203.1\|2763576_2765019_-\|DUF4041-domain-containing-protein	unknown	unknown	gnl\|CDD\|214947
CP036499.1\|QBJ30196.1\|2753042_2754044_-\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|169599
CP036499.1\|QBJ30213.1\|2775648_2775957_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP036499.1\|QBJ30205.1\|2765725_2766124_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ30212.1\|2775019_2775547_-\|hypothetical-protein	unknown	unknown	unknown
CP036499.1\|QBJ30215.1\|2777023_2778889_-\|transposase	unknown	unknown	gnl\|CDD\|378147
CP036499.1\|QBJ30214.1\|2775960_2777058_-\|transposase	unknown	unknown	gnl\|CDD\|377533
CP036499.1\|QBJ30209.1\|2770392_2771604_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377670
CP036499.1\|QBJ30208.1\|2768302_2770390_-\|hypothetical-protein	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|187867

Protein	Function_ID	Function_description	E-value
CP036499.1\|QBJ30199.1\|2759190_2760447_-\|Y-family-DNA-polymerase	gnl\|CDD\|176454	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V. umuC subunit of Pol V. Pol V is a bacterial translesion synthesis (TLS) polymerase that consists of the heterotrimer of one umuC and two umuD subunits. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol V, RecA, single stranded DNA-binding protein, beta sliding clamp, and gamma clamp loading complex are responsible for inducing the SOS response in bacteria to repair UV-induced DNA damage.	5.031e-155
CP036499.1\|QBJ30207.1\|2767264_2768296_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|187868	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas7 ortholog.	1.05896e-150
CP036499.1\|QBJ30208.1\|2768302_2770390_-\|hypothetical-protein	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	6.73219e-22
CP036499.1\|QBJ30198.1\|2755094_2758904_-\|hypothetical-protein	gnl\|CDD\|238697	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation.	8.1697e-61
CP036499.1\|QBJ30211.1\|2772844_2774491_-\|hypothetical-protein	gnl\|CDD\|275228	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase. Members of this family are AAA family ATPases by homology. They occur regularly in a conserved gene neighborhood with the restriction (R), modification (M), and specificity (S) proteins of an apparent type I restriction enzyme system, plus one additional uncharacterized protein. It is not clear whether members of this family contribute to restriction per se, or to another process such as transfer of mobile elements.	5.71951e-13
CP036499.1\|QBJ30197.1\|2754140_2754482_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|236654	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional.	2.94409e-27
CP036499.1\|QBJ30200.1\|2760446_2760854_-\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	1.30313e-28
CP036499.1\|QBJ30201.1\|2761147_2762167_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	4.48072e-27
CP036499.1\|QBJ30203.1\|2763576_2765019_-\|DUF4041-domain-containing-protein	gnl\|CDD\|214947	smart00974, T5orf172, This entry represents the putative helicase A859L.	2.61244e-20
CP036499.1\|QBJ30196.1\|2753042_2754044_-\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0
CP036499.1\|QBJ30213.1\|2775648_2775957_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.83808e-13
CP036499.1\|QBJ30209.1\|2770392_2771604_-\|hypothetical-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	1.50048e-12
CP036499.1\|QBJ30215.1\|2777023_2778889_-\|transposase	gnl\|CDD\|378147	pfam09299, Mu-transpos_C, Mu transposase, C-terminal. Members of this family are found in various prokaryotic integrases and transposases. They adopt a beta-barrel structure with Greek-key topology.	3.85385e-06
CP036499.1\|QBJ30214.1\|2775960_2777058_-\|transposase	gnl\|CDD\|377533	pfam05621, TniB, Bacterial TniB protein. This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein which is involved in Tn5053 mercury resistance transposition.	3.75094e-12
CP036499.1\|QBJ30206.1\|2766614_2767253_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.69599e-48

>CP036499.1|QBJ30205.1|2765725_2766124_-|hypothetical-protein
MSKKKLTEKVLLEGMTPYNTHSDLLAKTETKTDWMSFADEVELVTHDFMTNRNEVFDEPSSDLVNPDIFLSNLKLALDNLPDGDIELCDLGNEIGRIIANLNSPNKTLLREVIYGVEHGFDLVSKERGSSNG
>CP036499.1|QBJ30204.1|2765022_2765337_-|hypothetical-protein
MARRGSGLRTAIKIVKAIDRANKQAARESQRRQKANERAHAQAMREHEREVREAQRELQRQERLNKSAAKQAFKDAVANAAEEYQERCEERAALRKQFIQEVLK
>CP036499.1|QBJ30203.1|2763576_2765019_-|DUF4041-domain-containing-protein
MDNNLLMLAGLSLIAVVLTYILTKRSADKKIEQYKSLDEALAKKKEEYDSVCMSRESIIAATETAKLELDKINEETAELQALKGQDNVLKKSIQEQQATLESTKSTLDELNSSIEKGELELEELMGDLDLYSRLDEYTAHGHFEMPKYLYETSTRFAEEIKDIRQQQKDMIKDKTAITFPESTVISNDKSFNNSILNGQVKLMLTAFNIECDLLIGKVSPSSFGRTLERIEKLANTLEKSAATLECGFNIDYIELKFEECKLQYKYTLKKQEEVAEQQLIKEQIREEQRAIKEFEKAIADAEKEEKMYRNLLDKAQRELANATEQERSEMEKRIAMLEQQLAEAEAKEERAKSMAEQTRKGHVYVISNIGSFGEDVYKIGLTRRLEPMDRVKELGDASVPFPFDVHAMIYTDDAPALETALHREFNSKRVNAVNLRKEFFNVDLASIQEAVEKIAGIEAEFKMTALAEDYYESLRLSEAA
>CP036499.1|QBJ30202.1|2762211_2763273_-|hypothetical-protein
MSEKKKYSLLTSSDIEAGLINDRFKKEDISLIRDKEGKIVRHLPIVEVKDSVIPPSIIQVNNTYIYQTDIRPVIDALIETKNVEIFHDLSEKHQAVIDSLTYYRDHESRLDELNSKSLDASSVFEKRVEVYLNGIDLNNLEKTDIERCISMLDSYLNIIFVYLMSTYWIHNKKVSNDTIAGRKIADLDRQVRHIYEQLLASSSVNEENTNIIPMHNSLYARYFLVEKNGMKEIERFVKHDSRFDSLTDFMDFIQRCFIKKIESPYDYNRQTRDPDKYEISINLNENDRSANKKNEFMQKLFDVLEKIEMVKNIHSELIEVGEIDFSSIEVYSGSEANNALQLTTIPLALHSGS
>CP036499.1|QBJ30201.1|2761147_2762167_-|restriction-endonuclease
MAIYLVNGEFTATLSEAAGFKTGIALSKEQLIDVFPSDSDYKEMLSMSDESVIRIHSEDVDYIFNQILYYLGNIESPDNISSTIRLLHKYMKNEKLYPIFMAIFDMFNRHHKLMLDEAIKNGTKVMNPEPFMRECAEKYGKVGLNMAFEFIKGNSEDMHCRLSTYRRFEWDDTIDLKELFLSESLDSKYGEFIDQRYINFLHRNENKLGDMHWRKFEGLTAEYFDRQGYKVELGPGRNDGGIDVRVWKDKSGPGEAPLILIQCKRYQNKIDRTVVKALWADVQWEKAQSGLIVTTSSLSPGAANDCIARGYNIEQADKKIITTWLDSMKTPGTGVFMGK
>CP036499.1|QBJ30200.1|2760446_2760854_-|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MKVIPIFAHAGITGFESPAEEYTQLALDLDQLLIEHPCATFLGYACGDSMQDVGIFDKDLLIVDRSLDVQDFDIIVANLNGEFICKQIDLNRRLLLSANERYQPVPIHEFDQFSLEGIVTRSIRCHRVSPLLRAR
>CP036499.1|QBJ30199.1|2759190_2760447_-|Y-family-DNA-polymerase
MFALVDANSFYCSAEQVFRPDWRGKPMIVLSNNDGCIVAANRQAKEAGIEKFKPYFQVKALCEQKGVIALSSNYELYADLSAKMMQVIGRFAPEQHIYSIDESFLSFEHSFPAIRSLKEHGMKLRRAVWRECRLPVCVGFGQTLTLAKVANHAAKKIEGYNGVCVLDNERERKAVLGQLHVSEVWGIGRKLTHRLEMMGINTALKLANYPPALIRKEFNVEVERTVRELNGQKCKGWDTARADKKQIFSTRSAGQRITDLESLQQALCKHANIASFKARKQKSLCRVMLCFANSSPFDSLLVARRAVHRFAYPTADVTHITQAASRLAEQLFQQDVRFYKIGVGLIDLVDGLHEQPDLFNLTPNNPKLMNVYDTLNNRFGSDAIFLAAQGITQKWAMRREMLSPQYTTRWQDLPKIKC
>CP036499.1|QBJ30198.1|2755094_2758904_-|hypothetical-protein
MMRFLENGPSIPDELLLARDQGRVVFFCGAGVSRAKAGFADFFGLASSVTSELGVETSSPALKLIDAAKAITASTGVEGVVSADRIFGLLEREFLTRDIYKSVAKALTPEREVDLSAHQTMLKLATTNDGIVRLVTTNFDRLFDLCKPDINTFIPPRLPDLNHPIEFNGTVYLHGKVNEDGTGAASNGFVLSSSEFGDAYLANGWATSFVKGILEKYVVVFVGYSADDPPIQYLLEALNKSSSHLNDIYAFQSGDESYASSKWHHKGVKAIAYDETNGHIALWNTLESWAERASDPDAWYRGIITKAGMGPHLLQPFERGQIAHIVSTTEGAKKFANSEILAPATWLHVFDPELRYEVPRKNLSGKENLADMVDPFHFYSLDSDHTPQHVDPNDFYNKREVPTGAWDAFEFNSQDIKGTQDQRSIRFRGDDSSFPQFSTLPQRLNELTYWLSRVAEQPEVIWWVTKQQCLHPWVQFVLKSQCERRSKNMESTLNEAWNYVFDGFEQTDKRGHRDWFTLEGAIKNNGWCPRKLRQFEKITKPFIKVTPPYRTPNEINREQISLKDLIHLDIHYPELPRRLEIPDEWIIRIVEVLRRNLELAVELENEIGGYGLSLSCSLTPDKTTEDSYSRTYGLSAWVLLFVSYLEKLVLIDLDAARKELSRWPCADSTIFARLKIWALGKTNLVPNESIIITLNQLSDEAFWDSYHARDLLLAFVARWKELDQCSRSTIENRILQGPKLWKTEDESRFKERKARNILDRVTWLKQNGCELTIATDKLVDRLRDDTPEWKPEHAKDAARSFEVRSGIVTKNTDYSLLADEPIASILERASELSGRQADFLIDEDPFLGLSQEKPIRAFNALICSAKKGNIVDWAWDTFLYSEARKNDKPRFMALIAERLSGFTSDDLAKILRSVSSWFEKSTSVLADNYYATYYKLAFKLVDVMSIQPAKGKSSIIRGSKAPDWAMESINSPTGNLTSAILQSQHSRTFESGECFTGNLLLLLNQLLALPNDLHRYAMVILSRSLSWCFWVDPDWTQRNLLSALKSSREDRQAFWAGVLWGGVCGKELFTILKPSILELAYSGEVESRGHQDAIVGLIFSAWKIKYEDERWVSDLELKEVLIKASDDFRCGILWQARHGDSEDKEHWLQPFRELISNVWPKQLAAKSPAVSERLCDIAFWSEDHFPEIVNLITPFLTKLERANHIYLNDDNVLKKYPNDLLLLLNIVLPDNVNKWPYNIGEYLDQMIEASTELGDDERFIELKRKWDAR
>CP036499.1|QBJ30197.1|2754140_2754482_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MLPHQFFKLLADETRVRCLLMIAREEKVCVAELTEALNESQPKISRHLALLRASGVVVDIRQGQWVFYRISDQLPGWMRKQIQGLVESNCLKQEYQQDIQRLAEMTSRPQCCV
>CP036499.1|QBJ30196.1|2753042_2754044_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MAIKVGINGFGRIGRLALRASFDWPEIEFVQINDVAGDTATLAHLLEFDSVQGRWHHAVSSEADAILINGKRIRATQEKAIDAVDWSGCDVVIEATGKHRKGEFLNQYLAQGVKRVVVSAPVKEEGIANIVVGVNDHIFNPEQHRIVTAASCTTNCIAPVVKVIHEKLGIEQASFTTIHNLTNTQTILDAPHKDLRRARACGMSLIPTTTGSAKAIIEIFPDLKGKIDGHAVRVPLANASLTDIIFDVERDTTVEEINQLLKQASENELKGILGFEERPLVSIDYQGDQRSTIVDALSTMVVGKRMVKIYAWYDNEMGYATRTAELARKVGLA
>CP036499.1|QBJ30206.1|2766614_2767253_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MSQRYYFLIRYTNANADYGLLAGRCISQMHLFMVNHHQAMNRVGVSFPDWNESSVGQTIAFVSEDKEMMIGLSFQPYFSLMVNEGLFEISSVYEVPDTSEEVRFVRNQTIGKNFLGSKKRRIKRSMARAELFGIQQSLPVTNEDRAIDSFHQIPISSGSSRQDYILFIQKELADERAESGFNSYGFATNQEKRATVPDLRFNPFDEDSFLVQ
>CP036499.1|QBJ30207.1|2767264_2768296_-|type-I-F-CRISPR-associated-protein-Csy3
MELCTQLNYVRSLSAGKAYFYYLSESGEMCPFNVDRTRLRAPKGSYSEAYKGNKFVDKNVAPQDLAYSNPQFIEECYVKPGVDEIYCAFSLRIRANSLTPDICSDDEVRSKLSMFAKIYKELNGYKELANRYAKNILLGTWLWRNRECRNITIEVTTSELDTFVVEHAQKLSWYGHWDGDSTECLERLTAYLERALSDPTEYFYMDVKAKMRVGWGDEVYPSQEFLDSREDGIPTKQLATVELLSGKETVAFHGQKVGAALQSIDDWWHEEADKPLRVNEYGADREYVIARRHVAYGNDFYQLLRNTENWIESMTASESIPNDVHFIMSVLIKGGLFNCAKAN
>CP036499.1|QBJ30208.1|2768302_2770390_-|hypothetical-protein
MTKLSDLLAIEDEAIKQTALKKMFMPYTEDVCVDGYEQETLTILLNLSSSHQADRCSDWLDVARAQRYLKDRENLDASLAEIQWFHTHNLKFPDCRVKDQRIIARPLSTDEEFISSAVLDQRLGWAHNSAVYRHTLWLLNPFKWQSQPVCILSLIQQKNPVWLDLLTEFGLDVKSLARLQRAIEEQLPENSFPDSVSTYSKQLRFPWGDDYVSITPVVSHALQCELEIRARSPENKLSFVSSSLPNSASIGNLCGSLGGYMRVLNYPLGVKLAKGGTLTENRQKSGHYFDDYQVTNAKICQVLNRLIGSEPSKTQRQRERARKVRSKILRKQIALWMLPLIELRDIAESEPNQQQLEHDDTLAQAFLSLPEWELGSLAGEFNRRLHLAFQNNIYSAKFAYHPKLMQVAKAQVTWVLEQLSKPINNQDTVTGEQYIYLSSMRVQDAVAMSNPCLCGVPSLTAIWGFMHDYQRKFNQLVNNGSPVEFSSFAFYVRNENIQSTAKLTEPNSVAKARTVSNAKRPTIRSERLADLEIDLVIRVHSESRISDFRSALKTALPVAFAGGALYQPQLSMQIEWLRTFTGRSELFHVLKGLPAYGRWLYPSEKQPTNFDELERLLTQDDDNLPVSLGYHLLEHPTKRGNAITGCHAYAENAIGLAKRINPIEVRFSGRDHFLNHAFWSIECSSETILIKNYRD
>CP036499.1|QBJ30209.1|2770392_2771604_-|hypothetical-protein
MNTDIQLYPDESLESFLLRLSQEQGYERFSHFAEDIWFDTLDQHEAIPGAFPLELNRINIYHAQTTSQMRVRVLIHLENQLKLNNFGALRLALSHSKAQFSPEYKAVHRLGADYPFVFLAKRFTPICPLCISEAPYIRQQWQFLSQQACERHGCKLLHHCPECQSRLEYQTTESISQCECGFELRNSPVEDAPVAALLVARWLSGNDSKPLGLLKAEMTLSERYGFLLWYVNRYGDIENISFESFVEYCSCWPRVMQEELDELVNKADLIRIKDWKKTFFNEVFGALLKDCRQLPSRQLERNSVLTQVLAYFTKLMATLPSSSKGNVGDVLLSPLEVSTLLSCTTDEVYRLYEFGEIKAAIRPRMHTKIASHESAFTLRSVIETKLTRMCSENDGLSVYLPEW
>CP036499.1|QBJ30210.1|2771978_2772845_-|hypothetical-protein
MKKLPIPTYDDKERTTQASENTRMSSYPHLRNRLADVTSAYYNYLQQSGNALNIGPIGISNDLAKALKTHYTSEPECFSFIPLLRRSSRRVCPMCGSLGTGTLDHLLPQAIYPEFAVFSKNLVPACDCNIKRQDVVAGFCNQFNTGVRVLHPYFDDCLSERQIYFSIEPSPEYPLAKFGLVYINQNCNEFPSIKFHVESVVLPSGIVAEMVDMWSSLSEYPSDKIHTLPSDATITIESLNEALRDVLGRHDRQKTTPNNWESIFVYSIINSESAKEWIVEKHNSLMEE
>CP036499.1|QBJ30211.1|2772844_2774491_-|hypothetical-protein
MEKSDLYLTFTDENRAPKINEVILYAEDSSWNDFGYKIGCTLRVLTHEENKNFEVRAFIGFFDPRNSELDEELKNVNYKTTSYLAMLPIIRQLEKRNALDKLGFFTMLPDMEAYRYAVSYLGPEFLEKVLRIVNDLVLYKDKKNKWIPHAMNSAVFKLGFMRHSSSFFAFNNADSVLGGVEEEKFDGISQELTLRYELAGFENDHEIKLKYDHTSIIPKRINVLIGRNGLGKSQALMSFCRAALRYPDKGISLSTSDSNGRPVINRLLAIVTPGETQNTFPSERVKTQKLYYRRLSLTRNGRAKTTKTISDMLVQLARSEDSIGKKTRWDIFIDAISKVLPIKSLVIESRDKKYVGLADLGWGGGEQASLERWGNIAPNAEPKIMLAREAYPLSSGQLTFMKFAILCCLYIENGSFVLLDEPETHMHPNMISDFVGLLDEILENTGSLALIATHSAYFVREIPQDQVHVFKKEANNVCISNPRLTTFGAPVDSISRFVFDDDAESKLAEKLYRRIKRQNTTFEDIANKLGYEISVAAMMKLRQKMEEV
>CP036499.1|QBJ30212.1|2775019_2775547_-|hypothetical-protein
MNRKVPLNQWLYKALINKEMDGFTVLELRNRLLYATVGVFNKNELRKMLYRQLYQLAERGYLEKRNNQANEKSRYFKTSAFKSVEFISAHRTNLPSAKTGLPNSIQQPFIRYISQEKAQSEAELRILLGEVEEYKRVLTHFPAQSALIKPLYDKSKEYSAKLLGRVNALSKLESL
>CP036499.1|QBJ30213.1|2775648_2775957_+|XRE-family-transcriptional-regulator
MHKDNPIPTRLKEARKKAGITQKDLGIRIGMEPSSASGRMNHYEKGRHVPDLGTLERMAEELNVPLNYFFCRNELSAELACVIDKMSDEEKAALLDRLSREK
>CP036499.1|QBJ30214.1|2775960_2777058_-|transposase
MTMILKILKGINLNFTPKQLEQLKSFETCFIEYPAITEIYSIFDQLRFNHSLGGEPESFLLTGEAGSGKTALINNYLSRFQSGSTWGKQPVLSTRVPSRINEQNTLTQFLVDLDCKSGGGGVRRRNEIALGEAVVKQLKRKSVELIIVNEVQELVEFSTAEQRQVIANTFKYISEEARVSFVLVGMPYADVIATEPQWNSRLSWRRKIDYFKLLKANSHSSRTASYGFDLEQKKHFARFVAGLSSRMGFDEPPVLTKNELLYPLFTMCRGECRALKHFLKDALLICFNDNSDTIDKAILSRTFAFKFPYLDNPFDRPIEQLSLHQIDSGSAYNLNAIATEDKIVAPRFTDAIPLSMLLSKNGLKA
>CP036499.1|QBJ30215.1|2777023_2778889_-|transposase
MPPDSNSIFGFFDEFEASEEESQLLPKELILEPVEISSTIDSLPAKIQEEVLRRIKVITFVEKRLKGGWTEKNLNPILSLVESELQLTPPSWRTVATWKKSYAEAGREASALIPKHTFKGNRQKEMDSQSLIDEAIQNVYLTRERLSVAEAYRYYKSRVIQMNRGIVEGKIKPIAERSFYNRINELPPYEVAIARFGKRYADREYRSVGQQVVATKPMEFVEIDHTPVPVILIDDELDIPLGRPYLTMLYDRFSKCIVGCSINFREPSFDSVRKALLNSLLDKSWLKAKYPSIENEWPCHGKIDCLVVDNGAEFWSQSLEDSLRPLVSDIQYSQAAKPWRKSGIEKLFDQMNKGLVNALPGKTFTNPTQLQDYNPKKDAVVRVSVFLELLHKWIVDYYHMTPDSREREIPYHKWHQSKWTPSYYDGAEKDQLRVELGLLRHRTIGVAGIRLHNLRYQSAELIEYRKYCIPNNGKQLFVKTKTDPSDISYIHAYLESEKKYIKVPAVDNSGYTNGLSLFEHQRIQKVRSLNTKELVDNEALADTFLYMRKRIQEETDRFRRAKSSKPNLPKTGNTSKLAKFNDVGSEGPSSINVTPVRHKSEVVFDASEYLDDDDFEDIEGY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	NC_022747	Vibrio phage VPUSM 8, complete genome	5906-5938	2	0.939
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	KX058879	Vibrio phage VcP032, complete genome	4893-4925	2	0.939
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	AB374228	Vibrio phage kappa proviral DNA, complete genome	4543-4575	2	0.939
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	KU504502	UNVERIFIED: Vibrio phage 919TP, complete genome	4927-4959	2	0.939
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	AF008938	Vibrio cholerae V86 phage putative replication protein gene, complete cds	604-636	3	0.909
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	AF125163	Bacteriophage K139, complete genome	4896-4928	3	0.909
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	NC_003313	Vibrio phage K139, complete genome	4896-4928	3	0.909
CP036499_1	1.1\|438105\|37\|CP036499\|PILER-CR	438105-438141	37	NC_049942	Escherichia phage JLK-2012, complete sequence	23524-23560	4	0.892
CP036499_1	1.1\|438105\|37\|CP036499\|PILER-CR	438105-438141	37	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	35428-35464	4	0.892
CP036499_2	2.2\|2766459\|33\|CP036499\|CRISPRCasFinder	2766459-2766491	33	MN304818	Phage 71_18, complete genome	42287-42319	9	0.727

1. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to NC_022747 (Vibrio phage VPUSM 8, complete genome) position: , mismatch: 2, identity: 0.939

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacctctgcgcggctgcgtg	Protospacer
**********.*********************

2. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to KX058879 (Vibrio phage VcP032, complete genome) position: , mismatch: 2, identity: 0.939

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacctctgcgcggctgcgtg	Protospacer
**********.*********************

3. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to AB374228 (Vibrio phage kappa proviral DNA, complete genome) position: , mismatch: 2, identity: 0.939

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacctctgcgcggctgcgtg	Protospacer
**********.*********************

4. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to KU504502 (UNVERIFIED: Vibrio phage 919TP, complete genome) position: , mismatch: 2, identity: 0.939

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacctctgcgcggctgcgtg	Protospacer
**********.*********************

5. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to AF008938 (Vibrio cholerae V86 phage putative replication protein gene, complete cds) position: , mismatch: 3, identity: 0.909

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacttctgcgcggctgcgtg	Protospacer
**********.*****.***************

6. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to AF125163 (Bacteriophage K139, complete genome) position: , mismatch: 3, identity: 0.909

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacttctgcgcggctgcgtg	Protospacer
**********.*****.***************

7. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to NC_003313 (Vibrio phage K139, complete genome) position: , mismatch: 3, identity: 0.909

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
cgaggtaggcatctacttctgcgcggctgcgtg	Protospacer
**********.*****.***************

8. spacer 1.1|438105|37|CP036499|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*********************.***********. *

9. spacer 1.1|438105|37|CP036499|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
******.***************.*********** *.

10. spacer 2.2|2766459|33|CP036499|CRISPRCasFinder matches to MN304818 (Phage 71_18, complete genome) position: , mismatch: 9, identity: 0.727

cgaggtaggcgtctacctctgcgcggctgcgtt	CRISPR spacer
gccggtaggcgtccaccgctgcgcggccccact	Protospacer
   **********.*** *********. *..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

139651 : 146843

Anguillid_herpesvirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ27936.1\|139651_140080_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.0e-20	38.4
QBJ27937.1\|140282_141572_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	6.5e-34	34.0
QBJ27938.1\|141791_141986_-	Fe-S assembly protein IscX	NA	NA	NA	NA
QBJ27939.1\|142034_142373_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
QBJ27940.1\|142386_144237_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	7.7e-105	40.9
QBJ27941.1\|144260_144776_-	co-chaperone HscB	NA	NA	NA	NA
QBJ27942.1\|144824_145148_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	3.0e-25	50.5
QBJ27943.1\|145208_145592_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	5.4e-53	78.2
QBJ27944.1\|145628_146843_-	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	1.5e-32	30.5

DBSCAN-SWA_2

377257 : 384523

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ28133.1\|377257_378145_+	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	5.4e-56	41.1
QBJ28134.1\|378412_381001_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.7e-33	23.0
QBJ28135.1\|381096_382104_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.0e-35	34.2
QBJ28136.1\|382177_383113_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	7.8e-05	34.7
QBJ28137.1\|383112_383739_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.0e-36	52.1
QBJ28138.1\|383731_384523_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.6

DBSCAN-SWA_3

1466839 : 1473444

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ29075.1\|1466839_1467973_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.4e-64	40.4
QBJ29076.1\|1467981_1469235_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.5e-99	49.2
QBJ29077.1\|1469334_1469784_+	transcriptional regulator NrdR	NA	NA	NA	NA
QBJ29078.1\|1469796_1470900_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-43	32.9
QBJ29079.1\|1470904_1471558_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.2e-31	38.2
QBJ29080.1\|1471598_1472708_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	6.7e-64	39.8
QBJ29081.1\|1472973_1473444_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.8e-34	48.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP036500

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP036500_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036500_1

641244-641473

Orphan

Consensus_repeat	Method
AACTCAAATATCACTCGCCCCTCCCCCTTCTAGGGGGAGGTTGGGAGGGGGTATTTC	PILER-CR

2 spacers

The CRISPR arrays of CP036500_1

>merge|CP036500|1|641244-641473|PILER-CR
GCCCCTCCCCCTTCTAGGGGGAGGGGGTATTTCGCGCCAGATGTGTTAAACGTGGAAAATAAATACTTCCGCGAAACTCAAATATCGCTCGCCCCTCCCCCTTCTAGAGGGAGGTTGGGTGGGGGTATTTCACGCCAGATGAGTTAAATAGTTGAAAATAAATACTTCAACAAAACTCAAATATTACTCGCCCCTCCCCCTTCGAGGGGGAGGTTGGGAGGGGGTATTTC

>CP036500|1|1|641244-641473|PILER-CR
GCCCCTCCCCCTTCTAGGGGGAGGGGGTATTTCGCGCCAGATGTGTTAAACGTGGAA	AATAAATACTTCCGCGAAACTCAAATATCGCTCGCCCCTCCCCCTTCTAG
AGGGAGGTTGGGTGGGGGTATTTCACGCCAGATGAGTTAAATAGTTGAAAATAAATA	CTTCAACAAAACTCAAATATTACTCGCCCCTCCCCCTTCGAG
GGGGAGGTTGGGAGGGGGTATTTC

Protein	Signature genes	Signature genes Name	Protein_function
CP036500.1\|QBJ31005.1\|653930_654248_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979
CP036500.1\|QBJ31002.1\|648771_651345_-\|response-regulator	unknown	unknown	gnl\|CDD\|370421
CP036500.1\|QBJ30998.1\|646208_646514_-\|hypothetical-protein	unknown	unknown	unknown
CP036500.1\|QBJ30991.1\|635670_636924_+\|3-hydroxy-3-methylglutaryl-CoA-reductase	unknown	unknown	gnl\|CDD\|153081
CP036500.1\|QBJ31004.1\|652668_653829_-\|conjugal-transfer-protein-TraF	unknown	unknown	gnl\|CDD\|372693
CP036500.1\|QBJ30999.1\|646716_647115_+\|NirD/YgiW/YdeI-family-stress-tolerance-protein	unknown	unknown	gnl\|CDD\|225653
CP036500.1\|QBJ30989.1\|635075_635237_+\|hypothetical-protein	unknown	unknown	unknown
CP036500.1\|QBJ31001.1\|648069_648780_+\|flagellar-brake-protein	unknown	unknown	gnl\|CDD\|377796
CP036500.1\|QBJ30988.1\|634222_634798_-\|guanylate-cyclase	unknown	unknown	gnl\|CDD\|377902
CP036500.1\|QBJ30995.1\|639617_641072_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
CP036500.1\|QBJ31000.1\|647331_647871_+\|hypothetical-protein	unknown	unknown	unknown
CP036500.1\|QBJ30986.1\|631103_633269_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727
CP036500.1\|QBJ30992.1\|637034_638135_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP036500.1\|QBJ31003.1\|651362_652457_-\|autoinducer-2-binding-periplasmic-protein-LuxP	unknown	unknown	gnl\|CDD\|380526
CP036500.1\|QBJ30987.1\|633278_634226_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
CP036500.1\|QBJ30993.1\|638148_638847_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
CP036500.1\|QBJ30996.1\|641753_643628_-\|hypothetical-protein	unknown	unknown	unknown
CP036500.1\|QBJ30997.1\|643644_645663_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
CP036500.1\|QBJ30990.1\|635293_635584_+\|hypothetical-protein	unknown	unknown	unknown
CP036500.1\|QBJ30994.1\|638847_639612_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223797

Protein	Function_ID	Function_description	E-value
CP036500.1\|QBJ31002.1\|648771_651345_-\|response-regulator	gnl\|CDD\|370421	pfam09308, LuxQ-periplasm, LuxQ, periplasmic. Members of this family constitute the periplasmic sensor domain of the prokaryotic protein LuxQ, and assume a structure consisting of two tandem Per/ARNT/Simple-minded (PAS) folds.	2.17347e-116
CP036500.1\|QBJ30991.1\|635670_636924_+\|3-hydroxy-3-methylglutaryl-CoA-reductase	gnl\|CDD\|153081	cd00643, HMG-CoA_reductase_classI, Class I hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR). Hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR), class I enzyme, homotetramer. Catalyzes the synthesis of coenzyme A and mevalonate in isoprenoid synthesis. In mammals this is the rate limiting committed step in cholesterol biosynthesis. Class I enzymes are found predominantly in eukaryotes and contain N-terminal membrane regions. With the exception of Archaeoglobus fulgidus, most archeae are assigned to class I, based on sequence similarity of the active site, even though they lack membrane regions. Yeast and human HMGR are divergent in their N-terminal regions, but are conserved in their active site. In contrast, human and bacterial HMGR differ in their active site architecture.	1.97058e-176
CP036500.1\|QBJ31005.1\|653930_654248_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	1.85296e-41
CP036500.1\|QBJ30986.1\|631103_633269_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0
CP036500.1\|QBJ31001.1\|648069_648780_+\|flagellar-brake-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	1.57109e-14
CP036500.1\|QBJ30995.1\|639617_641072_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
CP036500.1\|QBJ30997.1\|643644_645663_-\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	7.68473e-07
CP036500.1\|QBJ30992.1\|637034_638135_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP036500.1\|QBJ31003.1\|651362_652457_-\|autoinducer-2-binding-periplasmic-protein-LuxP	gnl\|CDD\|380526	cd06303, PBP1_LuxPQ_Quorum_Sensing, periplasmic binding protein (LuxP) of autoinducer-2 (AI-2) receptor LuxPQ from Vibrio harveyi and its close homologs. Periplasmic binding protein (LuxP) of autoinducer-2 (AI-2) receptor LuxPQ from Vibrio harveyi and its close homologs from other bacteria. The members of this group are highly homologous to a family of periplasmic pentose/hexose sugar-binding proteins that function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea, and that are members of the type 1 periplasmic binding protein superfamily. The Vibrio harveyi AI-2 receptor consists of two polypeptides, LuxP and LuxQ: LuxP is a periplasmic binding protein that binds AI-2 by clamping it between two domains, LuxQ is an integral membrane protein belonging to the two-component sensor kinase family. Unlike AI-2 bound to the LsrB receptor in Salmonella typhimurium, the Vibrio harveyi AI-2 signaling molecule has an unusual furanosyl borate diester. Hence, many bacteria coordinate their gene expression according to the local density of their population by producing species specific AI-2. This process of quorum sensing allows LuxPQ to control light production as well as its motility behavior.	1.0011e-151
CP036500.1\|QBJ30987.1\|633278_634226_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	2.51158e-46
CP036500.1\|QBJ30993.1\|638148_638847_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	1.94691e-141
CP036500.1\|QBJ31004.1\|652668_653829_-\|conjugal-transfer-protein-TraF	gnl\|CDD\|372693	pfam13729, TraF_2, F plasmid transfer operon, TraF, protein.	6.24113e-74
CP036500.1\|QBJ30999.1\|646716_647115_+\|NirD/YgiW/YdeI-family-stress-tolerance-protein	gnl\|CDD\|225653	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown].	1.51815e-46
CP036500.1\|QBJ30988.1\|634222_634798_-\|guanylate-cyclase	gnl\|CDD\|377902	pfam07700, HNOB, Haem-NO-binding. The HNOB (Haem NO Binding) domain, is a predominantly alpha-helical domain and binds heme via a covalent linkage to histidine. It is a haem protein sensor (SONO) that displays femtomolar affinity for nitrous oxide, NO. It is predicted to function as a haem-dependent sensor for gaseous ligands and to transduce diverse downstream signals in both bacteria and animals.	1.48828e-43
CP036500.1\|QBJ30994.1\|638847_639612_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|223797	COG0725, ModA, ABC-type molybdate transport system, periplasmic component [Inorganic ion transport and metabolism].	3.16906e-80

>CP036500.1|QBJ30995.1|639617_641072_-|cobyric-acid-synthase
MKKWLMVQGTTSDAGKSVLVAGLCRVLARRGIQVCPFKPQNMALNSAVTPDGGEIGRAQAVQAQACGIAPSVHMNPVLLKPNSDTGAQVILQGRALSNMEANAYHDYKKVAMDTVMDSFQRLQQEYEAIMIEGAGSPAEINLRENDIANMGFAEKADVPVIIVADIDRGGVFAHLYGTLALLSESEQARVKGFVINRFRGDIGLLQSGLDWLEQKTGKPVIGVLPYLHGFDLEAEDAIAAQQNLSADRQLRVAVPGFTRISNHTDFDPLRLNPNIDFRYVGQGESLSGADLIILPGSKSTRADLAYLRSQGWDKEILRHLRLGGKVMGICGGFQMLGEWVHDPLGIEGEAGSSEGLGLFAMQTELTAEKRLTNVQGHLTLDGQTVAAQGYEIHAGRSSWAADQKSPIILSDGSLDGLVSDCNQGFGTYLHGIFDRPETALRICQWAGAKEIEAYDHRAAQERAIDRIADAIEQHLNLTLLWPDL
>CP036500.1|QBJ30994.1|638847_639612_-|molybdate-ABC-transporter-substrate-binding-protein
MPMLTRILLLLCVALNAPLASAKETLHIYAASSMTNAVNALVADYSQQHDVKLVTVYGGSSSLARQIEAGAPADLFISANEEWANYLVEKGLVKPNKVVTLAANSLVLIRPTAQPVASFELQDAAAWQAALADSRLAVAQVDAVPAGMYAKQALQHAGVWPELESRLAQTNNVRLALALVERGESPLGIVYKTDALLSDKVTIVTAFSAQSHPPIRYPLAQLNDKAASAEWVAYLRSDAAQQILQRFGFESVSE
>CP036500.1|QBJ30993.1|638148_638847_-|molybdate-ABC-transporter-permease-subunit
MMGLSDYEWAALALSLKVAGYATLWLLPIGIGLAWVLARTSFIGKGLIDSLVHLPLVLPPVVIGYLLLISMGRQGFIGQWLYQVFGLSFSFSWRGAVLACMVIALPLMVRSIRLSLESVDQKLEQAARTLGASPMRVFFTITLPLTLPGILTGVMLAFARSLGEFGATISFVSNIPGETQTIPLAMFTFLETPGSEMEAARLCAISIAIALGSLFISEWLSRRMQRRLGLTS
>CP036500.1|QBJ30992.1|637034_638135_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MSEVILQLQKRLGETQLDVDLRLPAVGICAIFGRSGAGKTSLINLISGLTTPDVGEIYLAGRTLFSSSQGIQLPIEQRKIGYVFQDARLFPHYTVRGNLNYGVTHADPEYFASVTRLLALEPLLARYPRDLSGGEKQRVAIGRALLSKPDLLLMDEPLASLDMPRKKEVMPFLENLAQHFRLPILYVSHSMQEILRLADHLVVLEQGKVLSAGPIEQVWSSKAMRPWQSFSEQSTLFSATVTKHHQVYGLTQVRLAEEVWLWVQQVEADVGSSVRMQVRANDVSIALDKPTASSIRNILPARIVAIEHQQPSKKSVSLKLELAPHCYLWAVVTEWAHAELALEIGMPVFAQIKGVSVAQRDVILTN
>CP036500.1|QBJ30991.1|635670_636924_+|3-hydroxy-3-methylglutaryl-CoA-reductase
MPKLALQPLYSPDVATLAPDRLIDQLAPRFDRPSVRLTPSPALTEQQVMKRWQKLAAPEAQALLLDEQTERTMQAYQKNIEYFIGTVKLPVGIAGPLRVNGSHAQGDYLVPLATTEAALVASYHRGSQLITAAGGASALLLNEGVTRTPVFAFLSLAQAGQFVGWVTSQFEQMKEVAQSTTAHGKLKDIQVNIEGNHVYLVFEYTTGDASGQNMVTIATHAVFEFIMRHSPVTPVQAFLDGNLSGDKKANSYTLRSVRGKKVSAEVHLSAELVKKYLHTTPEQMVQFGQMTTVGGALSGAIGVNAHYANALAALYIACGQDAACVAESAIGMTRMEIHPHGGLYASVTLPNLMVGTVGGGTHLPSQHACLSLMGLAGQGHARALAEVAAALCLAGELSIVGAFCAGHFSRAHHKLAR
>CP036500.1|QBJ30990.1|635293_635584_+|hypothetical-protein
MSVSAVSNGSSMVMHSSKMMEDAAREIQQASLPVESTIGKPIDPTLQPAPPAPKKQYANHIDALNSLNQASHYSRIGTNLIQRDQDMLGTMLDVRV
>CP036500.1|QBJ30989.1|635075_635237_+|hypothetical-protein
MNPKQFERWKSQLSQLSPQQLRALQGEIDRSLHQNESALLTEEERDAIAHLFS
>CP036500.1|QBJ30988.1|634222_634798_-|guanylate-cyclase
MKTSASEAIQMQGIIYTVLSDMVIEKFGVLFWDQMLEDLKPSSEGVYTSGQQYNDDELLAMVGYLSEKAQIPAPDLVRAYGEYLFTHLFNSLPENYPHKSDLKTFLLSVDKVIHKEVQRLYPDAYLPQFENRVEEKTLTMSYYSKRQLCAAAEGLILGAAKQFNQPVKITQPVCMHCGAGHCEIVVEFLPS
>CP036500.1|QBJ30987.1|633278_634226_-|two-component-sensor-histidine-kinase
MSAEAQYQRIYERERKARILAEKLLEEKSRALYDKVLELQSTLEQLNGAQAQLLQSEKMASVGQLAAGVAHEINNPIGFCLSNLNTLRDYAEVFAQLADFVEQSAPSFEGSEFYQAWMRFKQQHDLAFVREDVLSLVEESASGLHRVKDIVTSLQSVSHSSDGRFAECNLNDCIESALRIVWNQFKYTMLVDRQLAENLPKIKGIAPEIQQVLMNMFINASHACDEHGELTITTDTLNEKGKAWVQVQIADNGHGISPEHLAKIFDPFFTTKPVGVGTGLGLSIAFGIVEKHQGKISVTSEVGQGTRFTLLFPAI
>CP036500.1|QBJ30986.1|631103_633269_+|TIGR01666-family-membrane-protein
MPKINQLRLYWANKTVNYSVLILLTLLGVVIPAWYYQLNTWITPLILGVIAAALADRDDRFSGRLKSIILTLICFAIAAFSIEILFQSPWLFALGLFTSSFGFIMLGAMGARYASIAFASLLVAVYTMLGAHQSTNIWFQPLLLLSGSAWYYLMSMLWHAFWPMQPVQQNLANVFLQLANYLEAKSTLFHPVSNMIPQPHRIIEANLNAATVNALNQCKAVFLTRSKRGHVDSASDRFLNIYFLAQDIHERVSSSHYRYQELADHFGRSDILFRFKYLLETQAKACRDIAQSIRLGHSYQHDSASIVALDELQLSLSYLRQQERRDWKSLLGQLGYLFNNLATVEKQLNNVSNPDVAKPEEGVLDDTEAHTLGSMWQRIRANLNKDSLLFRHALRLSITLTLGYAIIQGFGIERGYWILLTTLFVCQPNYAATKQKLTARIIGTLAGLLIGVPLLTFFPSQESQLVFIVFSGVMFFAFRLNNYGYATGFITLLVLFCFNQLGEGYAVVLPRLADTLIGCALAVAAVVLILPDWQSKRLHKVMAEAIDANKQYLAQIIGQYRIGKKDSLSYRIARRHAHNQDAALSAAVTNMLAEPGRYRAAADESFRFLTLNHALLSYISALGAHRTRLDDETVHQLVLDSHRVIHQHLDLLHQQLSNHCEECDTSGIDSSGLEKRLAEWREDDEGSARMVLQQLHLIYRMLPELHTLASKFAVKVDSQSD
>CP036500.1|QBJ30996.1|641753_643628_-|hypothetical-protein
MLLEFIQEDGKKLELTEHALEHVLKGNFVVRPMKDRKDMKVLSGGLHTCEAWIDFRNCYEEELEHLHFYNSSQHTFWYYARELGNGVVTLRLPRELFSGKAAKITMYPDDYYKSGYLWKTLFPAGYDREKIIKVVEEALANEDVAQRKKGQIVGYINKDEPLSKMKVVIQHHGKEIKSVFPAWTQPNTGNNGKPYSHYENIGFVIAQSTEYFNDRDKVNQSCCFNFAGESFEIEKLPLFTPKLFSARNNPRRGQSLSDWKKSRKSELKKCDLDSEQNDLVYNYLNDFSLVKYYPEIMSGAYTHAWEMMASDTSFYNSFQVVQNIVDGLHYLYVTEQNDRLVTTIEFLLANMVSHTLFDLMSKKRTLSTMINVVVAAKLPELSYKFILGLAQSPVRREAYIEYNLDSLSKKKLRALLPLNDFPDELVLVKNPSLELELGFDDFIEVLKEALGETYTLNFNDDDLNALLNDIVLAQEPNFKKLVIESLRYFNSEDFTSLSEHIEAILETAERFEDSDKELLSDAVGLILRDYCRIQFAHRQRINARYIDYHDYASDMYLPLDSDLLFGIILKHERWTNSMNLERFVDGVIGFSERNAFKDLKNDAVNFRSKIGREKPPLPEREATS
>CP036500.1|QBJ30997.1|643644_645663_-|ATP-binding-protein
MSYNEFVGTAEITDHGIRKHFTKWKKVPLQSVIELIANGFDANAQTVHVDIEYSEMDGLVSVSVCDDGTGIDIGSCDEHFSRFYESSKKDDDDLQGAHGRGRLAFHLLCNDATWFTKRSEGKNARISIQNGTLREFRAAELTEREQIAALQSSEHGTYVQLTNFTTNLPTIDAITAKLQCEFGWRLALNKNRKLYLNGEEIEVPEHQLVEQTFQIEEESFDVSFVRWFDKPGVEKSYNYLVNSDGRVVFRELSSFNKKTDFYLSTYTSSKWIRTFDKYSNSLNFTNEPLANPNSPIYKALSKKIYQVSSEIYEQFQIEQVEMQIALYENKGFFPEHSNLPDDERAWRRKNIKNVVREVYVADPTLFRNLKPKQTKILIALLDKVLVSNENDELLDVLECVLGLEGEKLSTLSNQLSKTSLENVIATIEVLQKRDIAIYKLRELMVRHYKEVLETPDLQQIIEKNTWLFGNQYSLIGAEEADFQKIAVELRNHVKGINTLDEEDFEHKDLEEGLNVEGVRRQVDLFLARKTMAFDSSNRPYFKCTIIEIKKPSVALNRKHLNQIRDYARIIAQHVGFSDQKMKFELILVGRKVSDSDFEIPSALETAEEKNEPGLVFSQDKGRIKGFIKTWATIFDEFELSNQYLLEKLKLKRDSLEGETSVSLVSNLQEQEA
>CP036500.1|QBJ30998.1|646208_646514_-|hypothetical-protein
MQNRFKVLLGVILLFPMFAFAKINMAEVNAYAYEGLADMCANSRHITGEQQKELQAIYLQTKHARQKILPANNDFAHYAAKQLWDIHTAPDYEECIALLKK
>CP036500.1|QBJ30999.1|646716_647115_+|NirD/YgiW/YdeI-family-stress-tolerance-protein
MKRTIIALTSALILAPTLVIAADNAQHIKFIGDNQTQAGVQFQGPVEVVKVQSLLDSSNPFMEKKVVVEGNLVRQLRKDTFMFSDGSNEIQVELDDDIHLNATLTPETKVRLFGEFENGRTPEIEVDHIELL
>CP036500.1|QBJ31000.1|647331_647871_+|hypothetical-protein
MLADNVIMLKKTHLSLLLGLTLATPALANNFNYNFLEFRTAMNPESGGVEFSTYFTDNSHFIARIDSQLDSDWDIAGGIGFNGPINQFADVYGQMLVHNIRMPKELGGEKDTQLEFNLGARAWLTNQVEGHLRLGRLDDHSVFIAGVRFHSTDQLSLSAEARNAGVWGPQVGMGVRFQF
>CP036500.1|QBJ31001.1|648069_648780_+|flagellar-brake-protein
MYNFVNNKNKLRVFCMAVGSEDLNKLALLLKPGMKVSAEIHFGPEDTYAFHTTLIGHKIEQYIVLDLPLKAHQALVMRKLKNVAIVLRGMCDTELGHILAFQSSILQPSTKPFCVLFIRPPKHFATKAIRSHERYKVAIPAEVSEDNKNYAGTLVDFSISGCGVFIRGENELHMGSKVRINSELDPFLPKRLKSHIVNIRRKSNGHLIGIQFEQPITLTETLKKQVLEHAFLAGSI
>CP036500.1|QBJ31002.1|648771_651345_-|response-regulator
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAKNASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTPSEGKSVHILMRRSSLIEAGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAKDAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIGVSIASRWWLQKRIQREIETLMNYTHKLMDLDTKSEFIGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFLFEILERQLLPTITKAAQGDNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVRAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAPDPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNAGLN
>CP036500.1|QBJ31003.1|651362_652457_-|autoinducer-2-binding-periplasmic-protein-LuxP
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISDYWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNITTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATEQSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAEAIKWDLEGKAVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR
>CP036500.1|QBJ31004.1|652668_653829_-|conjugal-transfer-protein-TraF
MNIQTKSTLAVVMAMAFSSSAFASNLLMDARGAGMGNTGVSTADYLLAPYYNPALTAVYRKNDSFGILLPSIGLRAEDKDESLKTIDDLQDSIEQFERAGVGAATQENVDQLNRYLDQLADDKPLAVTAGIGIAVALPLDAVSLNFFTRGYAEVIAKANVAAKSGNSVNEVKTRYESSDVDLTAFGYTEVGLAVGKQVVLGGQTVALGVTPKVQQLRTYQDNASVKSFDLDDYDKSEVKDNAFNLDMGAVWLIDQYRVGIVAKDLFAKDIQTQNRNNTYKLDTQIAVSGSYVSDFFIAAVDLDLTKQRRFNGDNDDTQFMRFGVEGNAWGWAQLRAGYEVDLQNSLDNSVSVGLGVSPWDVVSLDLAGSYAGDNQFGLSANLAFTF
>CP036500.1|QBJ31005.1|653930_654248_-|GIY-YIG-nuclease-family-protein
MANGKLGLAELPSPWFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGKDPLELVWSLPVADGKSAALKLEYRIKALSKSQKEALVAGMARIDQLEIIFQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

286832 : 347199

Vibrio_phage(48.48%)

tail,tRNA,capsid,plate,terminase,integrase,transposase,portal

attL 287860:287876|attR 323969:323985

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ30643.1\|286832_287549_-	helix-turn-helix transcriptional regulator	R9TNM0	Vibrio_phage	3.1e-118	86.1
QBJ31385.1\|287644_287818_+	hypothetical protein	R9TPV3	Vibrio_phage	4.6e-20	78.2
287860:287876	attL	NA	NA	NA	NA
QBJ30644.1\|287887_288433_+	hypothetical protein	NA	NA	NA	NA
QBJ30645.1\|288613_289597_+	hypothetical protein	A0A067ZIA1	Vibrio_phage	1.8e-31	48.1
QBJ30646.1\|289565_289985_+	hypothetical protein	A0A2I7RQ30	Vibrio_phage	7.0e-06	32.3
QBJ30647.1\|289984_290617_+	hypothetical protein	A0A2I7RNS2	Vibrio_phage	1.6e-65	59.7
QBJ30648.1\|290618_291212_+	hypothetical protein	NA	NA	NA	NA
QBJ30649.1\|291469_292453_+	RNA-directed DNA polymerase	Q7M2A9	Enterobacteria_phage	1.1e-28	33.8
QBJ30650.1\|292454_294074_+	chromosome segregation protein SMC	NA	NA	NA	NA
QBJ30651.1\|294078_294876_+	TIGR02646 family protein	NA	NA	NA	NA
QBJ30652.1\|295008_295221_+	hypothetical protein	NA	NA	NA	NA
QBJ30653.1\|295201_295729_+	lysozyme	A0A1S6KZY9	Salmonella_phage	7.4e-29	40.7
QBJ30654.1\|295730_296096_+	hypothetical protein	NA	NA	NA	NA
QBJ30655.1\|296025_296310_+	hypothetical protein	NA	NA	NA	NA
QBJ31386.1\|296554_297784_+\|integrase	integrase	A0A067ZJC5	Vibrio_phage	4.8e-55	33.3
QBJ30656.1\|298228_298798_+	hypothetical protein	B0ZSE9	Halomonas_phage	4.9e-26	38.2
QBJ31387.1\|298808_300761_+\|terminase	terminase	A2I2W6	Vibrio_virus	1.1e-210	58.6
QBJ30657.1\|300754_301282_+	hypothetical protein	A2I2W7	Vibrio_virus	5.3e-11	31.3
QBJ30658.1\|301281_302850_+\|portal	phage portal protein	A0A088FVG5	Escherichia_phage	2.5e-117	42.7
QBJ30659.1\|302806_304786_+\|capsid	phage major capsid protein	A0A1W6JT82	Escherichia_phage	4.9e-158	46.8
QBJ30660.1\|304838_305135_+	hypothetical protein	NA	NA	NA	NA
QBJ30661.1\|305127_305478_+	hypothetical protein	R9TMM0	Vibrio_phage	4.9e-29	53.4
QBJ30662.1\|305440_306046_+	hypothetical protein	R9TR34	Vibrio_phage	7.9e-59	54.2
QBJ30663.1\|306038_306563_+	hypothetical protein	R9TNK0	Vibrio_phage	1.0e-22	35.6
QBJ30664.1\|306559_307207_+\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	6.8e-16	31.9
QBJ30665.1\|307208_307550_+\|plate	phage baseplate protein	A0A088FV58	Escherichia_phage	1.2e-32	60.4
QBJ30666.1\|307546_308425_+\|plate	phage baseplate protein	R9TML5	Vibrio_phage	5.5e-69	47.2
QBJ30667.1\|308424_308982_+\|tail	phage tail protein I	R9TR33	Vibrio_phage	4.1e-62	62.6
QBJ30668.1\|309826_310372_+	hypothetical protein	A9ZT45	Vibrio_virus	1.4e-33	61.6
QBJ30669.1\|310460_311927_+\|tail	phage tail protein	R9TMQ0	Vibrio_phage	1.4e-120	47.6
QBJ30670.1\|311926_312442_+\|tail	phage tail protein	A0A193GYM4	Enterobacter_phage	4.4e-18	31.5
QBJ30671.1\|312493_312796_+\|tail	phage tail assembly protein	Q75QK8	Wolbachia_phage	1.4e-08	39.2
QBJ30672.1\|312899_314681_+\|tail	phage tail protein	R9TRP8	Vibrio_phage	6.5e-109	41.9
QBJ30673.1\|314680_315076_+\|tail	phage tail protein	R9TMP6	Vibrio_phage	4.7e-28	48.1
QBJ30674.1\|315059_315266_+\|tail	phage tail protein	R9TR63	Vibrio_phage	4.5e-14	52.2
QBJ30675.1\|315256_316261_+\|tail	phage tail protein	R9TNM7	Vibrio_phage	4.1e-60	39.2
QBJ30676.1\|316604_317486_+	hypothetical protein	NA	NA	NA	NA
QBJ30677.1\|317905_318436_+	type VI secretion system PAAR protein	A0A2R3ZY74	Campylobacter_phage	1.1e-08	39.5
QBJ30678.1\|318435_319107_+	hypothetical protein	NA	NA	NA	NA
QBJ30679.1\|319108_319459_+	hypothetical protein	NA	NA	NA	NA
QBJ30680.1\|319727_321656_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.6e-127	37.6
QBJ30681.1\|321659_322211_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.2e-14	35.1
QBJ30682.1\|322314_322509_+	50S ribosomal protein L35	NA	NA	NA	NA
QBJ30683.1\|322550_322904_+	50S ribosomal protein L20	NA	NA	NA	NA
QBJ30684.1\|324229_324466_-	RNA-binding protein	NA	NA	NA	NA
323969:323985	attR	NA	NA	NA	NA
QBJ30685.1\|324719_325220_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
QBJ30686.1\|325356_326304_+	hypothetical protein	NA	NA	NA	NA
QBJ30687.1\|326461_327205_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
QBJ30688.1\|327380_327713_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
QBJ30689.1\|327699_328014_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
QBJ30690.1\|328133_328796_+	Vat family streptogramin A O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	3.3e-26	43.5
QBJ30691.1\|328933_329416_+	hypothetical protein	NA	NA	NA	NA
QBJ31388.1\|329595_329871_+	hypothetical protein	NA	NA	NA	NA
QBJ30692.1\|329927_330104_+	acetyltransferase	NA	NA	NA	NA
QBJ30693.1\|330496_331012_+	MazG-related protein	NA	NA	NA	NA
QBJ30694.1\|331685_332432_+	hypothetical protein	NA	NA	NA	NA
QBJ30695.1\|332577_333012_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QBJ30696.1\|333855_334038_+	DUF645 family protein	NA	NA	NA	NA
QBJ30697.1\|334368_334590_+	DUF3709 domain-containing protein	NA	NA	NA	NA
QBJ30698.1\|334633_334813_+	hypothetical protein	NA	NA	NA	NA
QBJ30699.1\|335000_335471_+	hypothetical protein	NA	NA	NA	NA
QBJ30700.1\|335783_336227_+	hypothetical protein	NA	NA	NA	NA
QBJ30701.1\|336283_336460_+	acetyltransferase	NA	NA	NA	NA
QBJ31390.1\|336523_336703_+	DUF645 family protein	NA	NA	NA	NA
QBJ31389.1\|337029_337239_+	DUF645 family protein	NA	NA	NA	NA
QBJ30702.1\|337389_337533_+	acetyltransferase	NA	NA	NA	NA
QBJ30703.1\|337979_338477_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QBJ30704.1\|338618_339053_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
QBJ30705.1\|339211_339646_+	VOC family protein	NA	NA	NA	NA
QBJ30706.1\|339776_340076_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
QBJ30707.1\|340072_340315_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
QBJ30708.1\|340533_341514_+	DUF3883 domain-containing protein	NA	NA	NA	NA
QBJ30709.1\|342187_342502_+	hypothetical protein	NA	NA	NA	NA
QBJ30710.1\|342688_342973_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
QBJ30711.1\|343122_343683_+	hypothetical protein	NA	NA	NA	NA
QBJ30712.1\|343845_344262_+	DUF1311 domain-containing protein	NA	NA	NA	NA
QBJ30713.1\|344417_344900_+	N-acetyltransferase	NA	NA	NA	NA
QBJ30714.1\|345036_345687_+	hypothetical protein	NA	NA	NA	NA
QBJ31391.1\|345881_346037_+	DUF2805 domain-containing protein	NA	NA	NA	NA
QBJ31392.1\|346009_347199_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.5e-122	68.8

DBSCAN-SWA_2

820610 : 842809

Vibrio_phage(33.33%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBJ31131.1\|820610_820823_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	4.2e-15	58.6
QBJ31132.1\|821129_823346_+	ribonuclease R	Q0GXV6	Lactococcus_phage	4.1e-60	33.1
QBJ31133.1\|823478_824957_-	ATPase	M4MHC7	Vibrio_phage	3.3e-42	37.0
QBJ31134.1\|824956_825217_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
QBJ31135.1\|825219_825597_-	hypothetical protein	A0A1I9KFD7	Aeromonas_phage	1.4e-18	45.0
QBJ31136.1\|825600_826251_-	hypothetical protein	A0A1I9KFE8	Aeromonas_phage	9.8e-39	44.2
QBJ31415.1\|826250_826592_-	hypothetical protein	NA	NA	NA	NA
QBJ31137.1\|826632_826995_-	hypothetical protein	NA	NA	NA	NA
QBJ31138.1\|826999_829132_-	DUF1983 domain-containing protein	A0A2L1IV54	Escherichia_phage	1.6e-53	29.8
QBJ31139.1\|829131_830739_-	hypothetical protein	A0A1I9KFD2	Aeromonas_phage	1.4e-123	45.0
QBJ31140.1\|830871_831540_-	hypothetical protein	NA	NA	NA	NA
QBJ31141.1\|831572_833405_-	hypothetical protein	A0A2I7S7J8	Vibrio_phage	1.6e-30	46.7
QBJ31142.1\|833404_834034_-	hypothetical protein	A0A1B1ITG1	uncultured_Mediterranean_phage	6.0e-17	30.2
QBJ31143.1\|834033_834633_-	hypothetical protein	NA	NA	NA	NA
QBJ31144.1\|834635_835100_-	hypothetical protein	A0A1I9KFH0	Aeromonas_phage	9.4e-28	57.7
QBJ31145.1\|835156_835537_-	hypothetical protein	M4MCI2	Vibrio_phage	1.8e-08	31.1
QBJ31146.1\|835551_836757_-	DUF4043 family protein	A0A088CC32	Shigella_phage	2.7e-135	58.3
QBJ31147.1\|836819_837824_-	ATPase	A0A1I9KFD1	Aeromonas_phage	5.2e-23	32.9
QBJ31416.1\|837941_838202_-	hypothetical protein	NA	NA	NA	NA
QBJ31148.1\|838213_838792_-	hypothetical protein	A0A1V0E8A2	Vibrio_phage	7.9e-24	36.9
QBJ31149.1\|838794_839016_-	hypothetical protein	NA	NA	NA	NA
QBJ31150.1\|839459_839978_-	secretion activator protein	Q6VT55	Vibrio_phage	1.2e-60	63.2
QBJ31151.1\|840046_840358_-	hypothetical protein	R9TR41	Vibrio_phage	2.2e-20	47.4
QBJ31152.1\|840736_841207_+	low molecular weight phosphatase family protein	A0A2H4J8A6	uncultured_Caudovirales_phage	4.0e-18	30.1
QBJ31153.1\|841361_842426_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
QBJ31154.1\|842470_842809_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	3.6e-21	49.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP036499

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP036500

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection