CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP036244	Escherichia coli strain S65EC plasmid pS65EC, complete sequence	0 crisprs	NA	0	0	1	0
CP036245	Escherichia coli strain S65EC chromosome, complete genome	2 crisprs	DinG,cas3,RT,DEDDh,c2c9_V-U4,csa3,WYL	0	1	12	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

9281 : 37076

Escherichia_phage(36.36%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG40881.1\|9281_10328_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	8.4e-08	26.9
QBG40882.1\|10436_11369_-	Homocysteine S-methyltransferase	NA	NA	NA	NA
QBG40883.1\|11355_12783_-	Amino-acid permease RocC	NA	NA	NA	NA
QBG40884.1\|13002_13983_+\|transposase	transposase	Q38213	Escherichia_phage	6.1e-186	99.4
QBG40885.1\|14210_14528_+	hypothetical protein	NA	NA	NA	NA
QBG40886.1\|14477_14852_-	Integrase core domain protein	Q716C2	Shigella_phage	5.4e-66	94.3
QBG40887.1\|14814_15174_-	hypothetical protein	A0A077SLM1	Escherichia_phage	5.0e-45	98.9
QBG40888.1\|15201_15381_-	hypothetical protein	Q71TH5	Escherichia_phage	3.5e-23	96.6
QBG40889.1\|15385_15766_-	Toxin Doc	A0A077SK56	Escherichia_phage	1.1e-63	100.0
QBG40890.1\|15765_15987_-	Phd_YefM	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
QBG40891.1\|16169_17726_+	HsdM modification protein	A0A2H4PQP4	Staphylococcus_phage	3.2e-104	42.7
QBG40892.1\|17722_19006_+	HsdS specificty protein	F2Y1N5	Organic_Lake_phycodnavirus	2.2e-10	26.5
QBG40893.1\|19127_22244_+	type I restriction enzyme R subunit	A0A220A398	Liberibacter_phage	3.7e-27	24.0
QBG40894.1\|22946_23198_+	Transposase	Q716C1	Shigella_phage	9.9e-24	86.4
QBG40895.1\|23215_24367_-	TnpA	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
QBG40896.1\|24515_25328_+\|transposase	IS2 transposase TnpB	U5P429	Shigella_phage	1.9e-148	93.3
QBG40897.1\|25429_25711_+	hypothetical protein	NA	NA	NA	NA
QBG40898.1\|25811_26189_-	InsB	Q71TF0	Escherichia_phage	1.7e-67	99.2
QBG40899.1\|26618_27944_+	Mercuric reductase	A0A2K5B2C5	Erysipelothrix_phage	6.5e-114	47.8
QBG40900.1\|28269_28815_+	hypothetical protein	NA	NA	NA	NA
QBG40901.1\|28787_29294_+	hypothetical protein	NA	NA	NA	NA
QBG40902.1\|29290_30082_+	ResD	I3WFA4	Macacine_betaherpesvirus	4.2e-52	91.1
QBG40903.1\|30219_30495_-	hypothetical protein	NA	NA	NA	NA
QBG40904.1\|30488_31133_-	signal recognition particle protein	A0A222YXS3	Escherichia_phage	1.9e-39	43.0
QBG40905.1\|31361_32333_+	ParM	A0A222YXF2	Escherichia_phage	6.3e-66	42.6
QBG40906.1\|32337_32730_+	StbB	NA	NA	NA	NA
QBG40907.1\|32734_34006_-	translesion synthesis protein B	F1C5A5	Cronobacter_phage	1.9e-142	60.5
QBG40908.1\|34005_34443_-	translesion synthesis protein A	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
QBG40909.1\|34439_34688_-	DNA damage-inducible protein I	Q2A098	Sodalis_phage	1.9e-14	48.0
QBG40910.1\|35081_36008_+	YccB	NA	NA	NA	NA
QBG40911.1\|36392_37076_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.1e-30	36.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP036245

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CRISPR-Cas detection and classification

Crispr_ID: CP036245_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036245_1

766015-766156

Orphan

Consensus_repeat	Method
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP036245_1

>merge|CP036245|1|766015-766156|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAGAAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGCGCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

>CP036245|1|1|766015-766156|CRISPRCasFinder
GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	AAACCGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAAACAGC
GCCGGATGCGGCGTGAATGCCTTATCCGGCCTACAAAAGAAATGCAG

Protein	Signature genes	Signature genes Name	Protein_function
CP036245.1\|QBG41714.1\|757901_758870_+\|2,3-diketo-L-gulonate:Na+-symporter---periplasmic-binding-protein	unknown	unknown	gnl\|CDD\|270387
CP036245.1\|QBG41721.1\|763469_765236_+\|succinate-dehydrogenase-flavoprotein	unknown	unknown	gnl\|CDD\|181594
CP036245.1\|QBG41722.1\|765251_765968_+\|succinate-dehydrogenase-iron-sulfur-protein	unknown	unknown	gnl\|CDD\|235652
CP036245.1\|QBG41726.1\|771622_772492_+\|succinyl-CoA-synthetase,-alpha-subunit	unknown	unknown	gnl\|CDD\|180194
CP036245.1\|QBG41729.1\|775420_778054_+\|alpha-mannosidase	unknown	unknown	gnl\|CDD\|182093
CP036245.1\|QBG41730.1\|778251_779445_+\|photosystem-I-assembly-protein-Ycf3	unknown	unknown	gnl\|CDD\|276809
CP036245.1\|QBG41724.1\|769145_770363_+\|Dihydrolipoyllysine-residue-succinyltransferase-component-of-2-oxoglutarate-dehydrogenase-complex	unknown	unknown	gnl\|CDD\|235571
CP036245.1\|QBG41727.1\|772595_773318_-\|MngR-DNA-binding-transcriptional-repressor	unknown	unknown	gnl\|CDD\|182065
CP036245.1\|QBG41731.1\|780987_782556_+\|cytochrome-bd-I-terminal-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|185052
CP036245.1\|QBG41723.1\|766329_769131_+\|subunit-of-E1(0)-component-of-2-oxoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|236499
CP036245.1\|QBG41728.1\|773486_775403_+\|2-O-alpha-mannosyl-D-glycerate-PTS-permease	unknown	unknown	gnl\|CDD\|182066
CP036245.1\|QBG41725.1\|770456_771623_+\|succinyl-CoA-synthetase,-beta-subunit	unknown	unknown	gnl\|CDD\|234813
CP036245.1\|QBG41715.1\|758929_759391_+\|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit	unknown	unknown	gnl\|CDD\|225632
CP036245.1\|QBG41716.1\|759390_760701_+\|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit	unknown	unknown	gnl\|CDD\|224509
CP036245.1\|QBG41732.1\|782571_783711_+\|cytochrome-bd-I-terminal-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|184965
CP036245.1\|QBG41713.1\|756677_757874_+\|D-altronate-dehydratase	unknown	unknown	gnl\|CDD\|377287
CP036245.1\|QBG41720.1\|763122_763470_+\|succinate-dehydrogenase-membrane-protein	unknown	unknown	gnl\|CDD\|181901
CP036245.1\|QBG41719.1\|762724_763129_+\|succinate-dehydrogenase-membrane-protein	unknown	unknown	gnl\|CDD\|181900
CP036245.1\|QBG41718.1\|762236_762344_-\|hypothetical-protein	unknown	unknown	unknown
CP036245.1\|QBG41717.1\|760747_762031_-\|citrate-synthase-monomer	unknown	unknown	gnl\|CDD\|180164

Protein	Function_ID	Function_description	E-value
CP036245.1\|QBG41714.1\|757901_758870_+\|2,3-diketo-L-gulonate:Na+-symporter---periplasmic-binding-protein	gnl\|CDD\|270387	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold. This subgroup includes the hyperthermophilic bacterium Thermotoga maritima TRAP-type C4-dicarboxylate transport system TM0322 and its closely related proteins. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.46494e-145
CP036245.1\|QBG41721.1\|763469_765236_+\|succinate-dehydrogenase-flavoprotein	gnl\|CDD\|181594	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
CP036245.1\|QBG41722.1\|765251_765968_+\|succinate-dehydrogenase-iron-sulfur-protein	gnl\|CDD\|235652	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	3.48257e-167
CP036245.1\|QBG41726.1\|771622_772492_+\|succinyl-CoA-synthetase,-alpha-subunit	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
CP036245.1\|QBG41729.1\|775420_778054_+\|alpha-mannosidase	gnl\|CDD\|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	0
CP036245.1\|QBG41730.1\|778251_779445_+\|photosystem-I-assembly-protein-Ycf3	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.01578e-17
CP036245.1\|QBG41724.1\|769145_770363_+\|Dihydrolipoyllysine-residue-succinyltransferase-component-of-2-oxoglutarate-dehydrogenase-complex	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
CP036245.1\|QBG41727.1\|772595_773318_-\|MngR-DNA-binding-transcriptional-repressor	gnl\|CDD\|182065	PRK09764, PRK09764, GntR family transcriptional regulator.	1.54929e-163
CP036245.1\|QBG41723.1\|766329_769131_+\|subunit-of-E1(0)-component-of-2-oxoglutarate-dehydrogenase	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
CP036245.1\|QBG41728.1\|773486_775403_+\|2-O-alpha-mannosyl-D-glycerate-PTS-permease	gnl\|CDD\|182066	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional.	0
CP036245.1\|QBG41731.1\|780987_782556_+\|cytochrome-bd-I-terminal-oxidase-subunit-I	gnl\|CDD\|185052	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA.	0
CP036245.1\|QBG41715.1\|758929_759391_+\|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.66483e-21
CP036245.1\|QBG41716.1\|759390_760701_+\|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.11617e-118
CP036245.1\|QBG41732.1\|782571_783711_+\|cytochrome-bd-I-terminal-oxidase-subunit-II	gnl\|CDD\|184965	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II.	0
CP036245.1\|QBG41713.1\|756677_757874_+\|D-altronate-dehydratase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	5.6924e-134
CP036245.1\|QBG41720.1\|763122_763470_+\|succinate-dehydrogenase-membrane-protein	gnl\|CDD\|181901	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit.	5.54037e-58
CP036245.1\|QBG41719.1\|762724_763129_+\|succinate-dehydrogenase-membrane-protein	gnl\|CDD\|181900	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit.	3.50714e-82
CP036245.1\|QBG41725.1\|770456_771623_+\|succinyl-CoA-synthetase,-beta-subunit	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
CP036245.1\|QBG41717.1\|760747_762031_-\|citrate-synthase-monomer	gnl\|CDD\|180164	PRK05614, gltA, citrate synthase.	0

>CP036245.1|QBG41722.1|765251_765968_+|succinate-dehydrogenase-iron-sulfur-protein
MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRNA
>CP036245.1|QBG41721.1|763469_765236_+|succinate-dehydrogenase-flavoprotein
MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNNRNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
>CP036245.1|QBG41720.1|763122_763470_+|succinate-dehydrogenase-membrane-protein
MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALVVYVIYGFVVVWGV
>CP036245.1|QBG41719.1|762724_763129_+|succinate-dehydrogenase-membrane-protein
MWALFMIRNVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLAGVLVW
>CP036245.1|QBG41718.1|762236_762344_-|hypothetical-protein
MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV
>CP036245.1|QBG41717.1|760747_762031_-|citrate-synthase-monomer
MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREIAAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKMLEEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKDDLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGWIAHWSEMHSDGMKIARPRQLYTGYAQRDFKSDIKK
>CP036245.1|QBG41716.1|759390_760701_+|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit
MTALSELLAGSWLDNWLMIIPLMFVCLFINMPVWLAMFCGILTYFLCYSNVPLMVAIQRLIATTQTPSLLAIPFFILLGTLMSYTGIAARILQIANVLIGRMRGGLGGANILVSTMMGGVSASNLADAAMLSRMMVPEMEQKGYSRGFAAAITASGSLITPIIPPGIALILYGLVADVSIGSMFMAGILPGLLCSAMLIVTVWLVAIRRGLKPSSEHWPKPKEVSVALVQAWPALFLIVAVIGGIRANIFTPTEAGAVAVLLVMFIGFVIYRELKISHVFTALSETARSTASVMLIIMASAALGWIFSLERAGITVAEFVTSLTDNKYVFLLIINLLLLVLGMFLEGSAILLILVPLLKPVVAHFGIDPVHFGIIMILNLSLGTLSPPVGTVMLLVCNTVQVSVGQFMREAVPLLISLILLLLVITYIPAISLLLV
>CP036245.1|QBG41715.1|758929_759391_+|2,3-diketo-L-gulonate:Na+-symporter---membrane-subunit
MRLLGKMIEVAAVLTLFILVIMTIAAVIMRYCFHMPLQWTEEVSGLLMIWVVMFGAVVAERDNTHLSIPFLADALTSRGQRILAFLVSLMSIILLVVMAWSAWKLAAGTAFKTTQILKISWFWIDIAVTVGAIGVACFTALQLIKKTPRKEGE
>CP036245.1|QBG41714.1|757901_758870_+|2,3-diketo-L-gulonate:Na+-symporter---periplasmic-binding-protein
MKKLLTPLLFLLALFSPMLNAAPVTIKIAYESNPGEPADTVVKHWAELVKKKSNGDIVFELYPSSQLGSKQDITEQALMGMNIITISDVGFLTDYDADLGILFGPYLTEDPQKLFAIYASDWFKQKEQKLREKGVHIVMSNYLYGTRQIIAKKPIRTPEDLKGMKIRVPNNVMQIKAIEAMGATPTPMPLGDVYPALTQGMIDGVENPVSVLYGQKLHEQAKYLSMVNYLTNTSLWLGGEAFFSTLTPAQLDIIHQTAYEAGLYSQKITTEQDATMLKTMQEQGVEIIYPDVAPFKEKALKVYQQFPEWTPGLYDTIQQQLK
>CP036245.1|QBG41713.1|756677_757874_+|D-altronate-dehydratase
MEGYVRQNGRPGIRNTVQVIFMVECASHVAKKIAEGFPCHDVQYFGFSGCYPSDYGYRLVKNLATHSNVGGVLIISLGCENFDRRRLEQEVRESGRPCHTLVIQENKGTTNTITLGKQLVAEMLEQLADTPRCILNWSDLVVGTICGGSDGTSGITGNPAVGRAFDQLLEKGATCIFEESGELLGCEQHMMSRAASSQARDAIEVAMTKAERYYSLMGLGSFSNGNAEGGLTTQEEKSLGAYTKSGDALIAGVILPTQQTPFPGLWLMDVVPDGEPRFGYPNINDSSEALELIASGCHMVLFTTGRGSVIGSVIAPIIKVCNNPQTWEHLSDDMDVNAGRVISEGATLDDIADDIMQVIEHVANGQYCAAERLEHQEFVLTYKAFDYSKSAVCRADPR
>CP036245.1|QBG41723.1|766329_769131_+|subunit-of-E1(0)-component-of-2-oxoglutarate-dehydrogenase
MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRSTFQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFRGHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEALKQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPEAVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAISEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGYMSVHQKQQQDLVNDALNVE
>CP036245.1|QBG41724.1|769145_770363_+|Dihydrolipoyllysine-residue-succinyltransferase-component-of-2-oxoglutarate-dehydrogenase-complex
MSSVDILVPDLPESVADATVATWHKKPGDVVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKAPAKESAPAAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV
>CP036245.1|QBG41725.1|770456_771623_+|succinyl-CoA-synthetase,-beta-subunit
MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK
>CP036245.1|QBG41726.1|771622_772492_+|succinyl-CoA-synthetase,-alpha-subunit
MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLADIGEALKTVLK
>CP036245.1|QBG41727.1|772595_773318_-|MngR-DNA-binding-transcriptional-repressor
MGHKPLYRQIADRIREQITCGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVETHSEVLIFEVIPADNFLQQQLQISEQDRVWHVKRVRYRKQKPVALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGQVFEYSRNAFNTDDYKFTLIAQRKSPR
>CP036245.1|QBG41728.1|773486_775403_+|2-O-alpha-mannosyl-D-glycerate-PTS-permease
MNLTTLTHRDALCLNVRFTSREEAIHALTQRLAALGKISSTEQFLEEVYCRESLGPTALGEGLAVPHGKTAAVKEAAFAVATLSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTTHMKLLTALTTRLADDELRARIQSATTPDELLSALDDKGDAQHTASFSYAPTIVCVTACPAGIAHTYMAAEYLEKAGRKLGVNIYVEKQGANGIEERLTAEQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEALIQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLLSQIFGLQDLFNEENSWLWMYRKLGGGMLGILMVPVLAAYTAYSLADKPALAPGFAAGLAANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLMLFVVGEPVAWINNSLTAWLNGLSGNNALLLGAILGFMCSFDLGGPVNKAAYAFCLGAMANGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPMAIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWFGAALVGAAISTAILLIWRHHAVKHGNYLTDGVMP
>CP036245.1|QBG41729.1|775420_778054_+|alpha-mannosidase
MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQDNEYKYYVLDGQTAILEDYFAVKPENKDRVKKLVEGGKLIIGPWYTQTDTTIVSAESIVRNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDKTEFLWQSSDGSEVTAQVLPLGYAIGKYLPADENGLRKRLDSYFDVLEKASVTKEILLPNGHDQMPLQQNIFEVMEKLREIYPQRKFVMSRFEEVFEQIEAQRESLAILKGEFIDGKYMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFDYHHGLLEKMWKEILKNHAHDSIGCCCSDKVHREIVARFELAEDMADNLIRFYMRKIADNMPQSDADKLVLFNLMPWPREEVINTTVRLRGSQFNLRDGRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPFMEFDIQISQIVPSMGYRTLYIEANQLGNVVTPKSKTEGILENAFWQIALNEDGSLRLVDKDSGVRYDRVFQIEEGSDDGDEYDYSPAKEEWAITSANAKPQYDIIHEAWQSRAIIRYEIAVPRNLSERRAKQCSGRVGVETVITLSHNSRRIDADINLDNQADDHRIRVLIPTPFNTDVVLADTQFGSLTRPVKDCAMNVWQQEGWKEAPVPVWNMLNYAVLQEGRNGIAVFSEGLREFEVIGEENKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVSDSQLRGSFSCRLSLFSYIGTPVTAGVAQQARAWLTPVQCYNKIPWDAMKLNKAKFNVPESYSLLKMPPVGCLISALKKAEDRQELILRLFNPAELTSCDATVAFSRKVMTCTETMMNERFNTEKNEVLKELALFLPGQSRTFSYRIV
>CP036245.1|QBG41730.1|778251_779445_+|photosystem-I-assembly-protein-Ycf3
MKKIVLPVALALLGMNAGAYAADVSIDILSATVKDKRIEGASVTLQRNGAQSVSGITNTSGSISLGTSFADNKDALLIVKKEGYSNLVVKCPCAGMTYAISPVMTNLDGMRVVLSWGEKPFDLDSHLIFPGGHIYFDSKEGTDANLDVDDTDSYGPETVTISKKHFGESYIYAVQDYSNKGLPNSNYLSASKAKVFVYVGSSLVRSYSVPAGKRGNIWTVFKLNPNGEFEDINSVTSANFNGTTLDVRDLATVIMPATDSSAPASPAMQNSGDTQLARKYNREGEAVYKTGQLEQAIQLFQQATELDGNYGQAFSNLGLAYQKNGNIAEAIWANRKAISLASGVNAATTRANSYYNIAKIYETSGQNAEALQHYQLAYTEKNKPSYEEAIARVKTKM
>CP036245.1|QBG41731.1|780987_782556_+|cytochrome-bd-I-terminal-oxidase-subunit-I
MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSSTTTQPAR
>CP036245.1|QBG41732.1|782571_783711_+|cytochrome-bd-I-terminal-oxidase-subunit-II
MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY

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Crispr_ID: CP036245_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP036245_2

932222-932304

Orphan

I-F

Consensus_repeat	Method
AGTTCACTGCCGTACAGGCAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP036245_2

>merge|CP036245|2|932222-932304|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCTTAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACAAGTTCACTGCCGTACAGGCAGAT

>CP036245|2|2|932222-932304|CRISPRCasFinder
AGTTCACTGCCGTACAGGCAGCT	TAGAAATTGCCGCGGATCCTGTCTGCCAATAATGACA
AGTTCACTGCCGTACAGGCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
CP036245.1\|QBG41881.1\|943957_944569_+\|periplasmic-chaperone,-effects-translocation-of-lipoproteins-from-inner-membrane-to-outer	unknown	unknown	gnl\|CDD\|129638
CP036245.1\|QBG41871.1\|928835_929060_-\|DNA-replication-inhibitor	unknown	unknown	gnl\|CDD\|77494
CP036245.1\|QBG41882.1\|944579_945923_+\|recombination-factor	unknown	unknown	gnl\|CDD\|237355
CP036245.1\|QBG41864.1\|918712_920365_-\|hybrid-cluster-protein	unknown	unknown	gnl\|CDD\|235391
CP036245.1\|QBG41883.1\|946013_947306_+\|seryl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|235461
CP036245.1\|QBG41866.1\|921822_922518_-\|water-channel-AqpZ	unknown	unknown	gnl\|CDD\|235453
CP036245.1\|QBG41875.1\|933197_933902_-\|leucyl,-phenylalanyl-tRNA-protein-transferase	unknown	unknown	gnl\|CDD\|234720
CP036245.1\|QBG41877.1\|935665_937432_-\|glutathione-/-L-cysteine-efflux-transporter---CydD-subunit	unknown	unknown	gnl\|CDD\|236870
CP036245.1\|QBG41868.1\|924597_925590_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225537
CP036245.1\|QBG41876.1\|933943_935665_-\|glutathione-/-L-cysteine-efflux-transporter---CydC-subunit	unknown	unknown	gnl\|CDD\|236865
CP036245.1\|QBG41865.1\|920508_921408_-\|putative-transporter	unknown	unknown	gnl\|CDD\|225287
CP036245.1\|QBG41870.1\|926816_928763_+\|MacAB-TolC-macrolide-efflux-transport-system---membrane-subunit	unknown	unknown	gnl\|CDD\|182528
CP036245.1\|QBG41880.1\|939692_943799_+\|essential-cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|236669
CP036245.1\|QBG41878.1\|937554_938625_-\|thioredoxin-reductase-monomer	unknown	unknown	gnl\|CDD\|182343
CP036245.1\|QBG41879.1\|939063_939558_+\|Lrp-transcriptional-dual-regulator	unknown	unknown	gnl\|CDD\|183009
CP036245.1\|QBG41867.1\|922942_924601_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226121
CP036245.1\|QBG41869.1\|925704_926820_+\|MacAB-TolC-macrolide-efflux-transport-system---membrane-fusion-protein	unknown	unknown	gnl\|CDD\|183211
CP036245.1\|QBG41873.1\|929733_932010_+\|ClpAXP	unknown	unknown	gnl\|CDD\|236828
CP036245.1\|QBG41874.1\|932694_932913_-\|protein-chain-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
CP036245.1\|QBG41872.1\|929382_929703_+\|specificity-factor-for-ClpA-ClpP-chaperone-protease-complex	unknown	unknown	gnl\|CDD\|178809

Protein	Function_ID	Function_description	E-value
CP036245.1\|QBG41881.1\|943957_944569_+\|periplasmic-chaperone,-effects-translocation-of-lipoproteins-from-inner-membrane-to-outer	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
CP036245.1\|QBG41871.1\|928835_929060_-\|DNA-replication-inhibitor	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
CP036245.1\|QBG41882.1\|944579_945923_+\|recombination-factor	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
CP036245.1\|QBG41864.1\|918712_920365_-\|hybrid-cluster-protein	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
CP036245.1\|QBG41883.1\|946013_947306_+\|seryl-tRNA-synthetase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
CP036245.1\|QBG41866.1\|921822_922518_-\|water-channel-AqpZ	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	7.82992e-144
CP036245.1\|QBG41875.1\|933197_933902_-\|leucyl,-phenylalanyl-tRNA-protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.92039e-139
CP036245.1\|QBG41877.1\|935665_937432_-\|glutathione-/-L-cysteine-efflux-transporter---CydD-subunit	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
CP036245.1\|QBG41868.1\|924597_925590_-\|hypothetical-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	3.26125e-132
CP036245.1\|QBG41876.1\|933943_935665_-\|glutathione-/-L-cysteine-efflux-transporter---CydC-subunit	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
CP036245.1\|QBG41865.1\|920508_921408_-\|putative-transporter	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	3.40497e-117
CP036245.1\|QBG41870.1\|926816_928763_+\|MacAB-TolC-macrolide-efflux-transport-system---membrane-subunit	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
CP036245.1\|QBG41880.1\|939692_943799_+\|essential-cell-division-protein-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
CP036245.1\|QBG41878.1\|937554_938625_-\|thioredoxin-reductase-monomer	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
CP036245.1\|QBG41879.1\|939063_939558_+\|Lrp-transcriptional-dual-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
CP036245.1\|QBG41867.1\|922942_924601_+\|hypothetical-protein	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
CP036245.1\|QBG41869.1\|925704_926820_+\|MacAB-TolC-macrolide-efflux-transport-system---membrane-fusion-protein	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
CP036245.1\|QBG41873.1\|929733_932010_+\|ClpAXP	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
CP036245.1\|QBG41874.1\|932694_932913_-\|protein-chain-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
CP036245.1\|QBG41872.1\|929382_929703_+\|specificity-factor-for-ClpA-ClpP-chaperone-protease-complex	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49

>CP036245.1|QBG41873.1|929733_932010_+|ClpAXP
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>CP036245.1|QBG41872.1|929382_929703_+|specificity-factor-for-ClpA-ClpP-chaperone-protease-complex
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>CP036245.1|QBG41871.1|928835_929060_-|DNA-replication-inhibitor
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>CP036245.1|QBG41870.1|926816_928763_+|MacAB-TolC-macrolide-efflux-transport-system---membrane-subunit
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLEWKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>CP036245.1|QBG41869.1|925704_926820_+|MacAB-TolC-macrolide-efflux-transport-system---membrane-fusion-protein
MKKRKTVKKRYVIAMVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKINDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>CP036245.1|QBG41868.1|924597_925590_-|hypothetical-protein
MVKSTSCITIDFMNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAELTFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFCS
>CP036245.1|QBG41867.1|922942_924601_+|hypothetical-protein
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENIPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>CP036245.1|QBG41866.1|921822_922518_-|water-channel-AqpZ
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRN
>CP036245.1|QBG41865.1|920508_921408_-|putative-transporter
MFSGLLIILVPLIVGYLIPLRQKAALRVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSTTVILLCNIAALMWLERGLPWSNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>CP036245.1|QBG41864.1|918712_920365_-|hybrid-cluster-protein
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIATLQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIIGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGEDFSAVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA
>CP036245.1|QBG41874.1|932694_932913_-|protein-chain-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>CP036245.1|QBG41875.1|933197_933902_-|leucyl,-phenylalanyl-tRNA-protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCDEFIRHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLSNNFWVPRCLFSPQE
>CP036245.1|QBG41876.1|933943_935665_-|glutathione-/-L-cysteine-efflux-transporter---CydC-subunit
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPKVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGIYLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMCEKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>CP036245.1|QBG41877.1|935665_937432_-|glutathione-/-L-cysteine-efflux-transporter---CydD-subunit
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLFLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQTALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGQIIEQGRYAELSVAGGPFATLLAHRQEEI
>CP036245.1|QBG41878.1|937554_938625_-|thioredoxin-reductase-monomer
MLPIAQIVNKIVILFFYVCKFPTILPLSANNYGDLMGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLTGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNTDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>CP036245.1|QBG41879.1|939063_939558_+|Lrp-transcriptional-dual-regulator
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>CP036245.1|QBG41880.1|939692_943799_+|essential-cell-division-protein-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQSTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAAEQPVQQPYYATAAEQPAQQPYYAPAPEQAVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNTEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAQQPQYQQPQQPVTQQPQYQQPQQPVVPQPQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>CP036245.1|QBG41881.1|943957_944569_+|periplasmic-chaperone,-effects-translocation-of-lipoproteins-from-inner-membrane-to-outer
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>CP036245.1|QBG41882.1|944579_945923_+|recombination-factor
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAVGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>CP036245.1|QBG41883.1|946013_947306_+|seryl-tRNA-synthetase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNFRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	12111-12158	8	0.833
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	424237-424284	8	0.833
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7391-7438	10	0.792
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84215-84262	10	0.792
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	87125-87172	10	0.792
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229237-229284	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229338-229385	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229439-229486	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239731-239778	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239832-239879	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239933-239980	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP044307	Escherichia coli strain C27A plasmid pC27A-2, complete sequence	15006-15053	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230643-230690	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230744-230791	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230845-230892	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211613-211660	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211714-211761	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211815-211862	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31250-31297	11	0.771
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3371-3418	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4012-4059	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4113-4160	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	208980-209027	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3370-3417	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4011-4058	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4112-4159	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	219474-219521	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3370-3417	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4011-4058	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4112-4159	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	210308-210355	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3370-3417	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4011-4058	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4112-4159	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	191263-191310	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	MT230402	Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence	270-317	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	101195-101242	12	0.75
CP036245_1	1.1\|766062\|48\|CP036245\|CRISPRCasFinder	766062-766109	48	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	158-205	13	0.729

1. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaac	Protospacer
.* .********************* ****************   *.*

2. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.833

aaaccgtaggcctgataagacgcgcaagcgtcg-catcaggcaaacagc	CRISPR spacer
aacctgtaggcctgataagacgcgcaagcgtcgccatcaggcatctca-	Protospacer
** *.**************************** *********  . .

3. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

4. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccggc	Protospacer
.  ..****** ************* ****************  *.**

5. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.792

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
attttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtgc	Protospacer
*  ..*******************  ****************    **

6. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

7. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

8. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

9. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

10. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

11. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

12. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctggt	Protospacer
.. .******* ************* ****************  ..*.

13. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

14. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

15. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

16. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

17. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgcg	Protospacer
** ..*******************. ****************  ..

18. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
aatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgca	Protospacer
** ..*******************. ****************  ..

19. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.771

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
cggctgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
 ..*.*******************  ****************   * .

20. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

21. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

22. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

23. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

24. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

25. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

26. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

27. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

28. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

29. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

30. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

31. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

32. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggctcgtaggcatgataagacgcgccagcgtcgcatcaggcacctgcg	Protospacer
.. .******* ************* ****************  ..

33. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgctagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

34. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgcg	Protospacer
*. ..****** ************* ****************  ..

35. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
agtgggtaggcctgataagacgcgtcagcgtcgcatcaggcatctgag	Protospacer
*.   *******************. ****************  ...

36. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
ggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgatt	Protospacer
.. ..*******************  ****************   * .

37. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.75

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
taatacaaggcctgataagacgcgccagcgtcgcatcaggcgctgaat	Protospacer
 **.   ****************** ***************.   *..

38. spacer 1.1|766062|48|CP036245|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 13, identity: 0.729

aaaccgtaggcctgataagacgcgcaagcgtcgcatcaggcaaacagc	CRISPR spacer
gtctngtaggcctgataagacgcgtcagcgtcgcatcaggcttcaatt	Protospacer
.  . *******************. ***************    * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

929382 : 1072174

169

Enterobacteria_phage(36.15%)

head,tRNA,tail,plate,protease,capsid,holin,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG41872.1\|929382_929703_+\|protease	specificity factor for ClpA-ClpP chaperone-protease complex	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
QBG41873.1\|929733_932010_+	ClpAXP	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
QBG41874.1\|932694_932913_-	protein chain initiation factor IF-1	NA	NA	NA	NA
QBG41875.1\|933197_933902_-\|tRNA	leucyl, phenylalanyl-tRNA-protein transferase	NA	NA	NA	NA
QBG41876.1\|933943_935665_-	glutathione / L-cysteine efflux transporter - CydC subunit	A0A2R8FG22	Brazilian_cedratvirus	1.2e-14	30.8
QBG41877.1\|935665_937432_-	glutathione / L-cysteine efflux transporter - CydD subunit	W8CYL7	Bacillus_phage	4.1e-23	24.3
QBG41878.1\|937554_938625_-	thioredoxin reductase monomer	A0A2I2L5E1	Orpheovirus	2.1e-62	44.6
QBG41879.1\|939063_939558_+	Lrp transcriptional dual regulator	NA	NA	NA	NA
QBG41880.1\|939692_943799_+	essential cell division protein FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
QBG41881.1\|943957_944569_+	periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer	NA	NA	NA	NA
QBG41882.1\|944579_945923_+	recombination factor	G3MBE0	Bacillus_virus	2.1e-80	40.8
QBG41883.1\|946013_947306_+\|tRNA	seryl-tRNA synthetase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.0e-95	48.2
QBG41884.1\|947611_947752_-	small toxic polypeptide	A0A0A7NPZ4	Enterobacteria_phage	1.5e-18	97.8
QBG41885.1\|947943_948204_-	DNA-binding transcriptional regulator	NA	NA	NA	NA
QBG41886.1\|948244_949354_-	Phage late control gene D protein (GPD)	A0A0A7NQ97	Enterobacteria_phage	1.3e-195	94.9
QBG41887.1\|949511_950696_+\|tail	Phage tail sheath protein	A0A0A7NV69	Enterobacteria_phage	8.4e-222	97.5
QBG41888.1\|950695_951208_+\|tail	Phage tail tube protein FII	A0A0A7NPV8	Enterobacteria_phage	1.5e-90	97.1
QBG41889.1\|951263_951638_+\|tail	Phage tail protein E	A0A0A7NPZ0	Enterobacteria_phage	9.9e-36	71.5
QBG41890.1\|951788_954596_+\|tail	Phage-related minor tail protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	90.1
QBG41891.1\|954608_955097_+	Phage P2 GpU	A0A0A7NV65	Enterobacteria_phage	1.4e-85	99.4
QBG41892.1\|955125_955725_-	site-specific DNA recombinase	A0A0A7NPV4	Enterobacteria_phage	3.8e-98	98.9
QBG41893.1\|955952_956738_+	putative membrane protein	Q858V4	Yersinia_virus	1.1e-108	76.6
QBG41894.1\|956739_957267_+\|tail	putative tail fiber assembly protein	A0A0C4UR05	Shigella_phage	2.6e-90	93.7
QBG41895.1\|957295_957829_-\|tail	Caudovirales tail fiber assembly protein	C9DGR0	Escherichia_phage	4.2e-96	98.9
QBG41896.1\|957831_959817_-	putative membrane protein	A0A0A7NV63	Enterobacteria_phage	3.2e-173	86.0
QBG41897.1\|959819_960350_-\|tail	Phage tail protein	A0A0A7NPV1	Enterobacteria_phage	3.6e-92	98.2
QBG41898.1\|960342_961239_-\|plate	Baseplate J-like protein	A0A0A7NPY5	Enterobacteria_phage	3.3e-154	97.7
QBG41899.1\|961242_961593_-	Gene 25-like lysozyme	A0A0A7NQ90	Enterobacteria_phage	3.5e-59	99.1
QBG41900.1\|961589_962171_-\|plate	Phage-related baseplate assembly protein	A0A0A7NRZ3	Enterobacteria_phage	3.3e-102	98.4
QBG41901.1\|962167_962812_-	Phage virion morphogenesis family protein	A0A0A7NV60	Enterobacteria_phage	5.4e-114	99.5
QBG41902.1\|962795_963263_-\|tail	P2 phage tail completion protein R (GpR)	A0A0A7NPU6	Enterobacteria_phage	3.5e-83	95.5
QBG41903.1\|963286_965164_-	putative 9-O-acetyl-N-acetylneuraminate esterase	H6WZJ9	Escherichia_phage	2.7e-299	80.2
QBG41904.1\|965302_965698_-	hypothetical protein	A0A0A7NPY2	Enterobacteria_phage	1.0e-59	93.3
QBG41905.1\|965694_966087_-	hypothetical protein	A0A0A7NQ86	Enterobacteria_phage	1.9e-69	96.9
QBG41906.1\|966083_966407_-\|holin	Phage holin family (Lysis protein S)	A0A0A7NRY9	Enterobacteria_phage	1.7e-47	93.5
QBG41907.1\|966409_966610_-	Phage Tail Protein X	A0A0A7NV57	Enterobacteria_phage	3.5e-32	100.0
QBG41908.1\|966609_967104_-\|head	Phage head completion protein (GPL)	A0A0A7NPU2	Enterobacteria_phage	1.9e-87	97.0
QBG41909.1\|967205_968006_-\|terminase	Phage small terminase subunit	A0A0A7NPX9	Enterobacteria_phage	6.9e-127	89.1
QBG41910.1\|968051_969104_-\|capsid	Phage major capsid protein	A0A0A7NQ82	Enterobacteria_phage	1.4e-188	94.3
QBG41911.1\|969127_969964_-\|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	A0A0A7NRY7	Enterobacteria_phage	2.7e-150	99.6
QBG41912.1\|970118_971870_+	Terminase-like family protein	A0A0A7NV54	Enterobacteria_phage	0.0e+00	97.8
QBG41913.1\|971869_972916_+\|portal	Phage portal protein	A0A0A7NPT9	Enterobacteria_phage	2.2e-202	99.7
QBG41914.1\|972930_973455_-	hypothetical protein	NA	NA	NA	NA
QBG41915.1\|974178_974676_+	hypothetical protein	NA	NA	NA	NA
QBG41916.1\|974715_975558_+	hypothetical protein	NA	NA	NA	NA
QBG41917.1\|975641_975956_-	Plasmid stability protein	A0A0A7NPT5	Enterobacteria_phage	4.1e-19	52.3
QBG41918.1\|975960_976920_-	Plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	4.2e-179	99.1
QBG41919.1\|976996_979819_-	Bacteriophage replication gene A protein (GPA)	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	98.4
QBG41920.1\|979825_980191_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.7e-61	97.5
QBG41921.1\|980263_980494_-	hypothetical protein	A0A0A7NV48	Enterobacteria_phage	9.1e-32	97.4
QBG41922.1\|980816_981116_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	2.4e-40	88.9
QBG41923.1\|981112_981379_-	hypothetical protein	A0A0A7NV47	Enterobacteria_phage	2.0e-30	75.9
QBG41924.1\|981375_981579_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.5e-25	83.6
QBG41925.1\|981602_982013_-	hypothetical protein	NA	NA	NA	NA
QBG41926.1\|982106_982220_-	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.8e-09	89.2
QBG41927.1\|982216_982459_-	hypothetical protein	A0A0A7NQ71	Enterobacteria_phage	2.3e-38	100.0
QBG41928.1\|982470_982749_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	3.1e-34	79.3
QBG41929.1\|982759_983110_-	hypothetical protein	A0A0A7NV42	Enterobacteria_phage	8.1e-56	93.1
QBG41930.1\|983247_983439_+	hypothetical protein	NA	NA	NA	NA
QBG41931.1\|983445_983868_-	hypothetical protein	NA	NA	NA	NA
QBG41932.1\|983872_984394_-	Regulatory phage protein cox	NA	NA	NA	NA
QBG41933.1\|984498_984840_+	helix-turn-helix protein	Q1JS45	Enterobacteria_phage	4.7e-16	51.2
QBG41934.1\|984909_985902_+	site-specific recombinase	A0A0F7LBR0	Escherichia_phage	1.3e-103	56.2
QBG41935.1\|986201_988646_+	dimethyl sulfoxide reductase, chain A	A0A077SK27	Escherichia_phage	6.6e-221	49.8
QBG41936.1\|988656_989274_+	dimethyl sulfoxide reductase, chain B	A0A077SL61	Escherichia_phage	5.0e-77	60.6
QBG41937.1\|989275_990139_+	dimethyl sulfoxide reductase, chain C	NA	NA	NA	NA
QBG41938.1\|990174_990801_-	putative hydrolase monomer	NA	NA	NA	NA
QBG41939.1\|991114_992263_+	YcaD MFS transporter	NA	NA	NA	NA
QBG41940.1\|992359_993157_-	pyruvate formate-lyase activating enzyme	A0A2P0VNQ0	Tetraselmis_virus	1.3e-21	26.6
QBG41941.1\|993188_994184_-	site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division	A0A0F7LBR0	Escherichia_phage	9.3e-190	99.4
QBG41942.1\|994277_994577_-	helix-turn-helix protein	Q1JS29	Enterobacteria_phage	1.0e-38	79.8
QBG41943.1\|994681_995038_+	Regulatory phage protein cox	A0A0F7LDH4	Escherichia_phage	5.9e-54	84.7
QBG41944.1\|995048_995219_+	hypothetical protein	S4TNZ7	Salmonella_phage	3.9e-24	98.2
QBG41945.1\|995215_995716_+	hypothetical protein	A0A0F7LBQ6	Escherichia_phage	4.5e-92	100.0
QBG41946.1\|995779_996004_+	hypothetical protein	S4TP68	Salmonella_phage	4.7e-33	100.0
QBG41947.1\|996003_996306_+	hypothetical protein	A0A0F7LDT6	Escherichia_phage	2.2e-46	99.0
QBG41948.1\|996305_996530_+	hypothetical protein	A0A0F7LDI3	Escherichia_phage	3.2e-34	97.3
QBG41949.1\|996526_996802_+	hypothetical protein	U5N3W1	Enterobacteria_phage	3.8e-45	100.0
QBG41950.1\|996791_999059_+	Bacteriophage replication gene A protein (GPA)	A0A0F7LBQ2	Escherichia_phage	0.0e+00	97.6
QBG41951.1\|999142_1000465_+	hypothetical protein	NA	NA	NA	NA
QBG41952.1\|1000795_1001830_-\|portal	Phage portal protein	M1SV64	Escherichia_phage	4.2e-201	99.4
QBG41953.1\|1001829_1003602_-	Terminase-like family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
QBG41954.1\|1003775_1004630_+\|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	Q94MB7	Escherichia_virus	2.7e-137	88.0
QBG41955.1\|1004688_1005762_+\|capsid	Phage major capsid protein	Q94MH9	Enterobacteria_phage	1.1e-201	99.2
QBG41956.1\|1005765_1006509_+\|terminase	Phage small terminase subunit	Q858W5	Yersinia_virus	3.6e-122	96.4
QBG41957.1\|1006608_1007118_+\|head	Phage head completion protein (GPL)	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
QBG41958.1\|1007117_1007321_+	Phage Tail Protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
QBG41959.1\|1007324_1007606_+\|holin	Phage holin family 2	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
QBG41960.1\|1007605_1008103_+	Phage lysozyme	A0A0F7LBS0	Escherichia_phage	9.0e-93	99.4
QBG41961.1\|1008117_1008543_+	hypothetical protein	M1SV74	Escherichia_phage	2.6e-56	95.0
QBG41962.1\|1008530_1008956_+	hypothetical protein	Q858W0	Yersinia_virus	3.4e-64	95.0
QBG41963.1\|1009063_1009531_+\|tail	P2 phage tail completion protein R (GpR)	A0A0F7LA33	Escherichia_phage	2.3e-82	99.4
QBG41964.1\|1009523_1009976_+	Phage virion morphogenesis family protein	A0A0F7LDR6	Escherichia_phage	1.8e-76	99.3
QBG41965.1\|1010042_1010678_+\|plate	Phage-related baseplate assembly protein	A0A0F7LBP2	Escherichia_phage	7.9e-110	97.2
QBG41966.1\|1010674_1011022_+	Gene 25-like lysozyme	A0A0F7L9X3	Escherichia_phage	1.7e-58	100.0
QBG41967.1\|1011026_1011935_+\|plate	Baseplate J-like protein	A0A0F7LCJ3	Escherichia_phage	2.6e-162	99.7
QBG41968.1\|1012031_1012457_+\|tail	Phage tail protein	Q858V5	Yersinia_virus	9.1e-78	97.1
QBG41969.1\|1012467_1015086_+\|tail	putative side tail fiber assembly protein	Q858V4	Yersinia_virus	1.6e-286	73.5
QBG41970.1\|1015085_1015664_+\|tail	putative tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.8e-68	65.4
QBG41971.1\|1016694_1017939_+	hypothetical protein	NA	NA	NA	NA
QBG41972.1\|1017939_1018797_+	hypothetical protein	NA	NA	NA	NA
QBG41973.1\|1018885_1019029_+	hypothetical protein	NA	NA	NA	NA
QBG41974.1\|1019371_1020562_+\|tail	Phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	3.7e-225	99.7
QBG41975.1\|1020574_1021093_+\|tail	Phage tail tube protein FII	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
QBG41976.1\|1021149_1021425_+\|tail	Phage tail protein E	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
QBG41977.1\|1021569_1024017_+\|tail	Phage-related minor tail protein	Q858U7	Yersinia_virus	0.0e+00	94.4
QBG41978.1\|1024031_1024532_+	Phage P2 GpU	Q7Y4C7	Escherichia_virus	7.7e-84	99.4
QBG41979.1\|1024509_1025673_+	Phage late control gene D protein (GPD)	U5N3V4	Enterobacteria_phage	3.5e-204	99.2
QBG41980.1\|1025754_1025973_+	DNA-binding transcriptional regulator	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
QBG41981.1\|1026291_1028574_-	pyruvate formate-lyase (inactive)	A0A2P0VNR5	Tetraselmis_virus	1.0e-162	41.5
QBG41982.1\|1028628_1029825_-	formate channel FocA	NA	NA	NA	NA
QBG41983.1\|1029891_1031652_-	protein involved in beta-methylthiolation of ribosomal protein S12	NA	NA	NA	NA
QBG41984.1\|1031781_1032474_+	hypothetical protein	NA	NA	NA	NA
QBG41985.1\|1032672_1033761_+	phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	2.7e-81	46.8
QBG41986.1\|1033831_1035115_+	3-phosphoshikimate-1-carboxyvinyltransferase	NA	NA	NA	NA
QBG41987.1\|1035370_1035943_-	site-specific DNA recombinase	A0A0A7NPV4	Enterobacteria_phage	4.6e-85	85.2
QBG41988.1\|1036482_1037097_-\|tail	putative tail fiber assembly protein	Q9MCR5	Enterobacteria_phage	2.5e-60	60.5
QBG41989.1\|1037096_1037579_-\|tail	putative side tail fiber protein	K7P7Q7	Enterobacteria_phage	7.5e-28	44.7
QBG41990.1\|1037619_1038867_-\|tail	putative side tail fiber protein	A0A0K2FIZ6	Escherichia_phage	2.0e-40	43.7
QBG41991.1\|1038869_1039448_-\|tail	Phage tail protein	A4JWL7	Burkholderia_virus	1.7e-66	66.8
QBG41992.1\|1039440_1040544_-\|plate	Baseplate J-like protein	Q6QI99	Burkholderia_phage	1.4e-106	55.2
QBG41993.1\|1040534_1040882_-	Gene 25-like lysozyme	Q6QIA0	Burkholderia_phage	5.9e-35	62.4
QBG41994.1\|1040936_1041533_-\|plate	Phage-related baseplate assembly protein	A4JWL4	Burkholderia_virus	3.2e-36	45.2
QBG41995.1\|1041529_1042684_-	Phage late control gene D protein (GPD)	Q6QIA2	Burkholderia_phage	1.9e-85	47.6
QBG41996.1\|1042671_1042884_-	Phage Tail Protein X	Q6QIA3	Burkholderia_phage	1.2e-17	57.1
QBG41997.1\|1042883_1043768_-	Phage P2 GpU	A4JWL1	Burkholderia_virus	6.8e-51	47.9
QBG41998.1\|1043767_1046719_-\|tail	Phage-related minor tail protein	A4JWL0	Burkholderia_virus	9.8e-86	29.9
QBG41999.1\|1046876_1047212_-	hypothetical protein	NA	NA	NA	NA
QBG42000.1\|1047309_1047591_-	hypothetical protein	NA	NA	NA	NA
QBG42001.1\|1047593_1048115_-\|tail	Phage tail tube protein FII	A4JWK6	Burkholderia_virus	1.8e-67	67.6
QBG42002.1\|1048114_1049542_-\|tail	Phage tail sheath protein	A4JWK5	Burkholderia_virus	4.5e-214	76.3
QBG42003.1\|1049531_1049783_-	hypothetical protein	NA	NA	NA	NA
QBG42004.1\|1049782_1050247_-	Gp37 protein	Q6QIB2	Burkholderia_phage	9.1e-39	51.7
QBG42005.1\|1050246_1050693_-	hypothetical protein	A4JWK2	Burkholderia_virus	2.2e-34	52.3
QBG42006.1\|1050694_1051033_-	hypothetical protein	NA	NA	NA	NA
QBG42007.1\|1051042_1051996_-	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-64	43.8
QBG42008.1\|1052010_1053126_-	hypothetical protein	A4JWJ9	Burkholderia_virus	9.4e-98	51.6
QBG42009.1\|1053340_1053799_-	Phage virion morphogenesis family protein	Q6QIB8	Burkholderia_phage	2.6e-30	44.8
QBG42010.1\|1053801_1054623_-	Phage Mu protein F like protein	A4JWJ6	Burkholderia_virus	1.8e-98	61.9
QBG42011.1\|1054603_1056100_-	hypothetical protein	A4JWJ5	Burkholderia_virus	9.7e-167	59.0
QBG42012.1\|1056099_1057695_-	Terminase-like family protein	A4JWJ4	Burkholderia_virus	6.5e-185	62.8
QBG42013.1\|1057691_1058237_-	hypothetical protein	A4JWJ3	Burkholderia_virus	9.3e-59	67.6
QBG42014.1\|1058236_1058548_-	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	9.4e-32	62.6
QBG42015.1\|1058547_1058874_-	hypothetical protein	Q6QIC4	Burkholderia_phage	1.1e-17	48.6
QBG42016.1\|1058870_1059521_-	hypothetical protein	J9SVN7	Pseudomonas_phage	2.8e-09	32.9
QBG42017.1\|1059504_1060212_-	membrane-bound lytic transglycosylase F	Q5ZQZ1	Pseudomonas_phage	3.1e-62	58.2
QBG42018.1\|1060247_1060598_-	hypothetical protein	A4JWP3	Burkholderia_virus	1.5e-22	53.0
QBG42019.1\|1060728_1061457_+	hypothetical protein	NA	NA	NA	NA
QBG42020.1\|1061432_1061834_-	hypothetical protein	NA	NA	NA	NA
QBG42021.1\|1061835_1062051_+	hypothetical protein	NA	NA	NA	NA
QBG42022.1\|1062241_1063006_+	DNA adenine methyltransferase	A2I2Y7	Vibrio_virus	5.2e-100	64.4
QBG42023.1\|1063122_1063479_-	DicA DNA-binding transcriptional repressor	NA	NA	NA	NA
QBG42024.1\|1063572_1063761_+	hypothetical protein	Q5ZQZ9	Pseudomonas_phage	3.9e-17	71.0
QBG42025.1\|1063813_1064122_+	hypothetical protein	Q5ZR02	Pseudomonas_phage	2.7e-23	55.9
QBG42026.1\|1064132_1065053_+	hypothetical protein	A4JWN3	Burkholderia_virus	1.6e-74	56.2
QBG42027.1\|1065052_1065370_+	hypothetical protein	NA	NA	NA	NA
QBG42028.1\|1065385_1067155_+	Integrase core domain protein	A4JWN2	Burkholderia_virus	1.5e-227	69.4
QBG42029.1\|1067165_1068332_+	hypothetical protein	A4JWN1	Burkholderia_virus	2.2e-121	59.4
QBG42030.1\|1068334_1068604_+	hypothetical protein	NA	NA	NA	NA
QBG42031.1\|1068631_1069162_+	Bacteriophage Mu Gam like protein	L7P7T1	Pseudomonas_phage	1.2e-58	66.7
QBG42032.1\|1069259_1069454_+	hypothetical protein	NA	NA	NA	NA
QBG42033.1\|1069450_1069723_+	hypothetical protein	NA	NA	NA	NA
QBG42034.1\|1069732_1070029_+	hypothetical protein	NA	NA	NA	NA
QBG42035.1\|1070043_1070259_+	hypothetical protein	NA	NA	NA	NA
QBG42036.1\|1070255_1070939_+	hypothetical protein	A0A2P9JZH4	Alteromonadaceae_phage	1.1e-32	36.1
QBG42037.1\|1070935_1071166_+	hypothetical protein	NA	NA	NA	NA
QBG42038.1\|1071155_1071362_+	hypothetical protein	NA	NA	NA	NA
QBG42039.1\|1071363_1071813_+	hypothetical protein	A4JWM5	Burkholderia_virus	6.1e-24	45.1
QBG42040.1\|1071784_1072174_+	Mor transcription activator family protein	Q6QIE8	Burkholderia_phage	1.5e-31	54.2

DBSCAN-SWA_2

1283500 : 1329209

Enterobacteria_phage(57.45%)

head,integrase,tRNA,tail,capsid,portal

attL 1281818:1281832|attR 1310412:1310426

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1281818:1281832	attL	NA	NA	NA	NA
QBG42240.1\|1283500_1284607_-\|tRNA	tRNA-specific 2-thiouridylase	NA	NA	NA	NA
QBG42241.1\|1284660_1285122_-	HMP-PP hydrolase /thiamine pyrophosphate hydrolase (multifunctional)	NA	NA	NA	NA
QBG42242.1\|1285131_1285785_-	23S rRNA pseudouridine 2457 synthase	NA	NA	NA	NA
QBG42243.1\|1285956_1287207_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
QBG42244.1\|1287320_1288463_-\|integrase	putative integrase	Q77Z02	Phage_21	3.6e-206	100.0
QBG42245.1\|1288452_1288689_-	putative excisionase	NA	NA	NA	NA
QBG42246.1\|1288828_1289068_-	hypothetical protein	M1FPC8	Enterobacteria_phage	4.7e-39	96.2
QBG42247.1\|1289051_1289378_-	hypothetical protein	A5VWB6	Enterobacteria_phage	9.8e-48	95.7
QBG42248.1\|1290153_1290336_-	hypothetical protein	A0A1U8QQC1	Enterobacteria_phage	1.8e-27	98.3
QBG42249.1\|1290332_1291013_-	putative exonuclease	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
QBG42250.1\|1291009_1291795_-	RecT family protein	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
QBG42251.1\|1291800_1292097_-	Host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	8.9e-48	98.0
QBG42252.1\|1292172_1292379_-	killing protein KilR	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
QBG42253.1\|1292974_1293730_-	HTH-type transcriptional regulator PrtR	Q76H56	Enterobacteria_phage	1.4e-92	75.0
QBG42254.1\|1293768_1293999_+	hypothetical protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
QBG42255.1\|1294068_1294608_+	phage protein YdaT	K7PJT7	Enterobacteria_phage	2.6e-61	67.0
QBG42256.1\|1294619_1295624_+	putative defective phage replication protein O	A0A0M5M7Y1	Salmonella_phage	8.7e-111	64.1
QBG42257.1\|1295620_1296322_+	Replication protein P	M1FJ72	Enterobacteria_phage	1.5e-125	97.0
QBG42258.1\|1296571_1300837_+	adhesin	NA	NA	NA	NA
QBG42259.1\|1300873_1301917_-	acetyl esterase	NA	NA	NA	NA
QBG42260.1\|1302364_1302820_+	DNA base-flipping protein	I6PD71	Cronobacter_phage	1.6e-59	66.9
QBG42261.1\|1302819_1302990_+	hypothetical protein	K7P7K0	Enterobacteria_phage	2.4e-13	69.8
QBG42262.1\|1302982_1303273_+	hypothetical protein	K7PGZ6	Enterobacteria_phage	2.3e-48	95.8
QBG42263.1\|1303269_1303632_+	endodeoxyribonuclease RUS (Holliday junction resolvase)	K7PM48	Enterobacteria_phage	1.6e-59	95.7
QBG42264.1\|1303631_1303769_+	small protein YlcG	K7PHH3	Enterobacteria_phage	1.4e-08	69.8
QBG42265.1\|1303765_1304455_+	Phage antitermination protein Q	I6PDF8	Cronobacter_phage	4.9e-57	48.5
QBG42266.1\|1304776_1305082_+	hypothetical protein	A0A286N2Q5	Klebsiella_phage	7.0e-40	87.6
QBG42267.1\|1305068_1305545_+	Phage lysozyme	K7PKV2	Enterobacteria_phage	7.3e-84	94.9
QBG42268.1\|1305541_1306003_+	putative murein endopeptidase	A0A0K2FJD0	Enterobacteria_phage	2.7e-75	97.4
QBG42269.1\|1306034_1306328_-	hypothetical protein	K7PL54	Enterobacteria_phage	7.0e-45	92.8
QBG42270.1\|1306808_1307135_+	TonB energy transducing system - TonB subunit	H6WZK5	Escherichia_phage	3.7e-39	72.2
QBG42271.1\|1307257_1307611_-	hypothetical protein	NA	NA	NA	NA
QBG42272.1\|1308087_1308633_+	DNA packaging protein	A0A0K2FIG2	Enterobacteria_phage	6.8e-94	98.3
QBG42273.1\|1308607_1310533_+\|tail	putative tail fiber assembly protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
1310412:1310426	attR	NA	NA	NA	NA
QBG42274.1\|1310529_1310736_+	gpW	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
QBG42275.1\|1310732_1312334_+\|portal	Phage portal protein, lambda family	A0A0K2FJC0	Enterobacteria_phage	1.4e-309	98.9
QBG42276.1\|1312314_1313634_+	putative inner membrane peptidase	A0A2I6TC87	Escherichia_phage	1.1e-230	97.7
QBG42277.1\|1313643_1313976_+\|head	Bacteriophage lambda head decoration protein D	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
QBG42278.1\|1314031_1315057_+\|capsid	Phage major capsid protein E	C6ZCY2	Enterobacteria_phage	7.8e-192	99.4
QBG42279.1\|1315098_1315497_+	hypothetical protein	A0A0K2FIR1	Enterobacteria_phage	1.0e-62	98.5
QBG42280.1\|1315508_1315862_+	Phage Head-Tail Attachment	A0A2R9YJJ5	Escherichia_phage	2.2e-61	98.3
QBG42281.1\|1315873_1316452_+\|tail	Prophage minor tail protein Z (GPZ)	A0A2R9YJK4	Escherichia_phage	5.9e-80	92.7
QBG42282.1\|1316448_1316844_+\|tail	Phage minor tail protein U	A0A2R9YJI2	Escherichia_phage	2.9e-70	98.5
QBG42283.1\|1316851_1317592_+	Bacterial Ig-like domain (group 2)	A0A2I6TC77	Escherichia_phage	1.6e-130	98.0
QBG42284.1\|1317607_1318030_+\|tail	Bacteriophage lambda minor tail protein (GpG)	A0A0K2FIQ8	Enterobacteria_phage	2.2e-68	94.3
QBG42285.1\|1318011_1318446_+\|tail	Minor tail protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
QBG42286.1\|1318438_1321000_+\|tail	putative tail protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.4
QBG42287.1\|1320996_1321326_+\|tail	Phage minor tail protein	A0A0K2FIE9	Enterobacteria_phage	2.8e-58	99.1
QBG42288.1\|1321325_1322024_+\|tail	Phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	5.1e-134	99.6
QBG42289.1\|1322172_1322772_+	NlpC/P60 family protein	K7PLW1	Enterobacteria_phage	1.5e-118	97.5
QBG42290.1\|1322768_1323311_+\|tail	Bacteriophage lambda tail assembly protein I	A0A291AWV5	Escherichia_phage	1.3e-76	84.1
QBG42291.1\|1323371_1326854_+	Fibronectin type III protein	A0A291AWT4	Escherichia_phage	0.0e+00	90.3
QBG42292.1\|1326912_1328934_+	putative membrane protein	A0A0E3M0V5	Enterobacteria_phage	7.2e-181	72.3
QBG42293.1\|1328930_1329209_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	9.9e-25	55.4

DBSCAN-SWA_3

1447785 : 1524757

Escherichia_phage(25.0%)

head,integrase,tail,protease,transposase,portal,lysis

attL 1447066:1447082|attR 1472881:1472897

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1447066:1447082	attL	NA	NA	NA	NA
QBG42420.1\|1447785_1448991_-\|transposase	putative IS1 transposase	NA	NA	NA	NA
QBG42421.1\|1449115_1451791_-	pyruvate formate-lyase deactivase (multifunctional)	NA	NA	NA	NA
QBG42422.1\|1452267_1452915_+	putative inner membrane protein	NA	NA	NA	NA
QBG42423.1\|1452941_1453097_+	hypothetical protein	NA	NA	NA	NA
QBG42424.1\|1453072_1453234_-	hypothetical protein	NA	NA	NA	NA
QBG42425.1\|1453607_1455284_+	peptide ABC transporter - periplasmic binding protein	NA	NA	NA	NA
QBG42426.1\|1455369_1456290_+	murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit	NA	NA	NA	NA
QBG42427.1\|1456304_1457213_+	murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit	NA	NA	NA	NA
QBG42428.1\|1457224_1458238_+	murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit	G9BWD6	Planktothrix_phage	2.0e-14	31.7
QBG42429.1\|1458234_1459239_+	murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit	G3M9Y6	Bacillus_virus	2.3e-15	30.7
QBG42430.1\|1459291_1459621_-	DUF440 domain-containing protein YciU	NA	NA	NA	NA
QBG42431.1\|1459655_1461116_-	cardiolipin synthase	NA	NA	NA	NA
QBG42432.1\|1461486_1462740_-	K+ channel Kch monomer	NA	NA	NA	NA
QBG42433.1\|1463039_1463336_-	putative enzyme	NA	NA	NA	NA
QBG42434.1\|1463559_1464276_+	TonB energy transducing system - TonB subunit	NA	NA	NA	NA
QBG42435.1\|1464315_1464714_-	acyl-CoA thioesterase	NA	NA	NA	NA
QBG42436.1\|1464818_1465358_-	putative inner membrane protein	NA	NA	NA	NA
QBG42437.1\|1465387_1466131_-	putative inner membrane protein	NA	NA	NA	NA
QBG42438.1\|1466486_1467125_+	OmpW, outer membrane protein	NA	NA	NA	NA
QBG42439.1\|1467170_1468301_-\|integrase	putative integrase	O21940	Phage_21	3.4e-103	51.4
QBG42440.1\|1468591_1471063_-	phage protein YdfE	A0A192Y6E0	Salmonella_phage	5.7e-55	56.0
QBG42441.1\|1471155_1471347_-	phage protein YdfD	NA	NA	NA	NA
QBG42442.1\|1471343_1471532_-	cell division inhibition protein	NA	NA	NA	NA
QBG42443.1\|1472097_1472316_-	phage protein RzpQ	NA	NA	NA	NA
QBG42444.1\|1472345_1472474_-	small protein YdfB	NA	NA	NA	NA
QBG42445.1\|1472475_1472712_-	phage protein YdfA	M4QQ57	Salicola_phage	1.4e-06	51.1
QBG42446.1\|1472903_1473620_-	DicA DNA-binding transcriptional repressor	H9C160	Pectobacterium_phage	1.7e-52	42.0
1472881:1472897	attR	NA	NA	NA	NA
QBG42447.1\|1473669_1473885_+	DNA-binding transcriptional regulator for DicB	NA	NA	NA	NA
QBG42448.1\|1473881_1474307_+	phage protein YdaT	NA	NA	NA	NA
QBG42449.1\|1474404_1475292_+	putative defective phage replication protein O	S5FM81	Shigella_phage	7.3e-61	55.7
QBG42450.1\|1475298_1476045_+	putative DNA replication protein	A0A088CBP4	Shigella_phage	4.0e-113	83.8
QBG42451.1\|1476066_1476837_+	putative DNA-binding protein	A0A0U2SAW4	Escherichia_phage	1.6e-80	64.5
QBG42452.1\|1476852_1477278_+	hypothetical protein	A0A0U2QQN3	Escherichia_phage	2.2e-63	94.0
QBG42453.1\|1477452_1478118_+	hypothetical protein	NA	NA	NA	NA
QBG42454.1\|1478298_1478511_+	small toxic polypeptide HokD	A0A0U2QV81	Escherichia_phage	5.2e-26	90.0
QBG42455.1\|1478952_1480008_+	phage protein YdfU	A0A291AWV9	Escherichia_phage	4.0e-90	48.4
QBG42456.1\|1480008_1480389_+	endodeoxyribonuclease RUS (Holliday junction resolvase)	V5URS4	Shigella_phage	2.9e-35	64.5
QBG42457.1\|1480385_1481207_+	putative antitermination protein Q	K7P7B9	Enterobacteria_phage	1.7e-80	60.1
QBG42458.1\|1481433_1481631_+	hypothetical protein	Q9MC00	Enterobacteria_phage	6.1e-29	98.5
QBG42459.1\|1481782_1482832_+	DNA adenine methyltransferase	A0A0N7KZF8	Stx2-converting_phage	4.4e-198	95.4
QBG42460.1\|1484045_1484381_-\|lysis	inhibitor of sS proteolysis	Q8HAJ1	Enterobacteria_phage	5.2e-44	74.8
QBG42461.1\|1484641_1486495_+	putative 9-O-acetyl-N-acetylneuraminate esterase	Q08JA2	Stx2-converting_phage	0.0e+00	90.3
QBG42462.1\|1486645_1486861_+\|lysis	putative phage lysis protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
QBG42463.1\|1486865_1487210_+	phage protein YdfR	K7PGU6	Enterobacteria_phage	2.8e-37	95.2
QBG42464.1\|1487175_1487448_-	hypothetical protein	NA	NA	NA	NA
QBG42465.1\|1487553_1488087_+	putative lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
QBG42466.1\|1488379_1488511_+	hypothetical protein	A0A0P0ZG36	Escherichia_phage	7.5e-07	74.4
QBG42467.1\|1488729_1489224_+	putative murein endopeptidase	Q9ZXB6	Enterobacteria_phage	1.7e-72	87.7
QBG42468.1\|1489220_1489436_+	hypothetical protein	NA	NA	NA	NA
QBG42469.1\|1489634_1489835_-	phage protein YnfO	H6WZK6	Escherichia_phage	4.3e-30	98.5
QBG42470.1\|1489876_1490242_+	HNH endonuclease	B6ETE5	Enterobacteria_phage	2.5e-60	93.4
QBG42471.1\|1490532_1491096_+	Terminase small subunit	A0A0P0ZD56	Stx2-converting_phage	1.6e-82	92.0
QBG42472.1\|1491092_1492754_+	putative DNA-binding transcriptional regulator	B6DZ98	Enterobacteria_phage	0.0e+00	98.7
QBG42473.1\|1492817_1494755_+\|head,protease	Caudovirus prohead protease	H6WZL0	Escherichia_phage	0.0e+00	100.0
QBG42474.1\|1494799_1495021_+	hypothetical protein	B6DZA0	Enterobacteria_phage	5.8e-36	100.0
QBG42475.1\|1494966_1497552_+\|portal	Phage portal protein	A0A0P0ZDD0	Stx2-converting_phage	0.0e+00	100.0
QBG42476.1\|1497548_1497875_+\|head,tail	Phage gp6-like head-tail connector protein	A0A0P0ZBH1	Stx2-converting_phage	9.2e-54	100.0
QBG42477.1\|1497884_1498235_+\|head,tail	Phage head-tail joining protein	A0A0P0ZB28	Stx2-converting_phage	1.6e-59	100.0
QBG42478.1\|1498231_1498678_+	hypothetical protein	A0A0N7KZI9	Stx2-converting_phage	5.2e-76	100.0
QBG42479.1\|1498674_1499019_+	hypothetical protein	A0A0P0ZC17	Stx2-converting_phage	1.4e-57	100.0
QBG42480.1\|1499085_1499802_+	Immunoglobulin I-set domain protein	A0A0P0ZDV1	Stx2-converting_phage	3.6e-127	99.6
QBG42481.1\|1499816_1500191_+\|tail	Phage tail assembly chaperone	A0A0P0ZE84	Stx2-converting_phage	1.7e-64	99.2
QBG42482.1\|1500286_1500496_+	hypothetical protein	H6WZM0	Escherichia_phage	1.5e-33	100.0
QBG42483.1\|1500543_1503786_+	Tail length tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	0.0e+00	91.5
QBG42484.1\|1503778_1504120_+\|tail	Phage minor tail protein	A0A0P0ZBQ8	Stx2-converting_phage	9.0e-60	95.6
QBG42485.1\|1504119_1504818_+\|tail	Phage minor tail protein L	B6DZB1	Enterobacteria_phage	5.8e-130	97.4
QBG42486.1\|1504828_1505572_+	NlpC/P60 family protein	Q6H9T4	Enterobacteria_phage	4.3e-147	97.6
QBG42487.1\|1505568_1506150_+\|tail	Bacteriophage lambda tail assembly protein I	H6WZM5	Escherichia_phage	1.3e-90	97.4
QBG42488.1\|1506492_1509966_+	Fibronectin type III protein	A0A0P0ZBW1	Stx2-converting_phage	0.0e+00	89.7
QBG42489.1\|1510033_1510492_+	phage protein LomR	Q9EV15	Enterobacteria_phage	9.5e-65	89.0
QBG42490.1\|1512161_1512623_+\|transposase	transposase/IS protein	NA	NA	NA	NA
QBG42491.1\|1513864_1514602_-	hypothetical protein	NA	NA	NA	NA
QBG42492.1\|1514843_1516274_+	hypothetical protein	A0A0F7LDR4	Escherichia_phage	3.8e-112	47.9
QBG42493.1\|1516289_1516817_+\|tail	putative tail fiber assembly protein	A0A0C4UR05	Shigella_phage	8.4e-73	77.7
QBG42494.1\|1516847_1517381_-\|tail	Caudovirales tail fiber assembly protein	A0A077SL44	Escherichia_phage	1.8e-67	70.1
QBG42495.1\|1517382_1518168_-	putative membrane protein	Q858V4	Yersinia_virus	1.3e-109	77.8
QBG42496.1\|1518340_1518430_+	hypothetical protein	NA	NA	NA	NA
QBG42497.1\|1518776_1519433_-	putative SAM-dependent methyltransferase	NA	NA	NA	NA
QBG42498.1\|1519501_1519771_+	hypothetical protein	K7PMH7	Enterobacteria_phage	9.3e-20	79.4
QBG42499.1\|1519885_1520056_+	hypothetical protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
QBG42500.1\|1520182_1520740_-	Phage regulatory protein Rha	Q8H9L9	Vibrio_phage	4.2e-30	63.8
QBG42501.1\|1521387_1522194_-	tryptophan synthase, alpha subunit	NA	NA	NA	NA
QBG42502.1\|1522193_1523387_-	tryptophan synthase, beta subunit	NA	NA	NA	NA
QBG42503.1\|1523398_1524757_-	indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase	A0A0P0IR83	Acinetobacter_phage	3.9e-37	41.2

DBSCAN-SWA_4

1751084 : 1759911

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG42702.1\|1751084_1752299_-	mannonate/altronate dehydratase	Q6A202	Oenococcus_phage	8.2e-47	29.2
QBG42703.1\|1752504_1752831_-	hypothetical protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
QBG42704.1\|1752965_1753307_+	hypothetical protein	NA	NA	NA	NA
QBG42705.1\|1753341_1753902_+	spermidine acetyltransferase	NA	NA	NA	NA
QBG42706.1\|1753904_1754651_-	YnfC lipoprotein	NA	NA	NA	NA
QBG42707.1\|1754722_1755028_+	DUF1161 domain-containing protein YnfD	NA	NA	NA	NA
QBG42708.1\|1755226_1757653_+	oxidoreductase subunit	A0A077SK27	Escherichia_phage	1.7e-213	49.2
QBG42709.1\|1757740_1758475_+	oxidoreductase subunit	A0A077SK27	Escherichia_phage	1.4e-46	48.3
QBG42710.1\|1758471_1759209_+	oxidoreductase subunit	A0A077SK27	Escherichia_phage	4.6e-45	41.1
QBG42711.1\|1759293_1759911_+	oxidoreductase, Fe-S subunit	A0A077SL61	Escherichia_phage	9.5e-76	59.6

DBSCAN-SWA_5

2033758 : 2097623

Escherichia_phage(28.57%)

head,tRNA,tail,plate,protease,capsid,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG42979.1\|2033758_2035531_-\|tRNA	aspartyl-tRNA synthetase	NA	NA	NA	NA
QBG42980.1\|2035840_2036407_+	putative hydrolase	NA	NA	NA	NA
QBG42981.1\|2036403_2037222_+	hypothetical protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
QBG42982.1\|2037274_2037670_+	putative inner membrane protein	NA	NA	NA	NA
QBG42983.1\|2037710_2038454_+	putative methyltransferase	F5B419	Synechococcus_phage	4.6e-24	30.0
QBG42984.1\|2038450_2039422_+	putative S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA
QBG42985.1\|2039457_2041887_-	trimethylamine N-oxide reductase III, TorZ subunit	NA	NA	NA	NA
QBG42986.1\|2041911_2043012_-	trimethylamine N-oxide reductase III, c-type cytochrome subunit	NA	NA	NA	NA
QBG42987.1\|2043399_2044146_-	copper homeostasis protein	NA	NA	NA	NA
QBG42988.1\|2044159_2044726_-	putative metal-binding enzyme	NA	NA	NA	NA
QBG42989.1\|2044941_2046675_+\|tRNA	arginyl-tRNA synthetase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7
QBG42990.1\|2046727_2047120_-	flagellar protein	NA	NA	NA	NA
QBG42991.1\|2047119_2049198_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
QBG42992.1\|2049190_2050339_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA
QBG42993.1\|2050527_2051172_-	CheZ	NA	NA	NA	NA
QBG42994.1\|2051182_2051572_-	putative DNA-binding response regulator in two-component system with YedV	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
QBG42995.1\|2051586_2052636_-	putative response regulator in two-component system with YpdA	Q56AR1	Bacillus_thuringiensis_phage	1.0e-05	32.8
QBG42996.1\|2052638_2053499_-	chemotaxis protein methyltransferase	NA	NA	NA	NA
QBG42997.1\|2053624_2053744_-	methyl accepting chemotaxis protein - dipeptide sensing	NA	NA	NA	NA
QBG42998.1\|2053789_2055451_-	methyl accepting chemotaxis protein II - aspartate sensing	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
QBG42999.1\|2055595_2056099_-	chemotaxis signaling complex - aspartate sensing	NA	NA	NA	NA
QBG43000.1\|2056119_2058084_-	Chemotaxis protein CheA	NA	NA	NA	NA
QBG43001.1\|2058088_2059015_-	MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall	NA	NA	NA	NA
QBG43002.1\|2059011_2059899_-	MotA protein, proton conductor component of motor, no effect on switching	NA	NA	NA	NA
QBG43003.1\|2060025_2060604_-	FlhDC DNA-binding transcriptional dual regulator	NA	NA	NA	NA
QBG43004.1\|2060606_2060957_-	FlhDC DNA-binding transcriptional dual regulator	NA	NA	NA	NA
QBG43005.1\|2061736_2062165_+	universal stress protein	NA	NA	NA	NA
QBG43006.1\|2062171_2063596_-	trehalose-6-phosphate synthase	NA	NA	NA	NA
QBG43007.1\|2063570_2064371_-	trehalose-6-phosphate phosphatase	NA	NA	NA	NA
QBG43008.1\|2064537_2065524_-	arabinose ABC transporter - membrane subunit	NA	NA	NA	NA
QBG43009.1\|2065538_2067053_-	arabinose ABC transporter - ATP binding subunit	A0A285PWH2	Cedratvirus	1.3e-12	29.7
QBG43010.1\|2067122_2068112_-	arabinose ABC transporter - periplasmic binding protein	NA	NA	NA	NA
QBG43011.1\|2068906_2069410_+	putative ferritin-like protein	NA	NA	NA	NA
QBG43012.1\|2069487_2069739_-	YecJ	NA	NA	NA	NA
QBG43013.1\|2070203_2070527_+	YecR	NA	NA	NA	NA
QBG43014.1\|2070698_2071196_+	ferritin iron storage protein	NA	NA	NA	NA
QBG43015.1\|2071233_2071473_-	YecH	NA	NA	NA	NA
QBG43016.1\|2071663_2072875_+	tyrosine:H+ symporter TyrP	NA	NA	NA	NA
QBG43017.1\|2072925_2073591_-	hypothetical protein	NA	NA	NA	NA
QBG43018.1\|2074062_2074482_-	hypothetical protein	G8C7Q7	Escherichia_phage	1.8e-49	68.8
QBG43019.1\|2074648_2074813_-	hypothetical protein	NA	NA	NA	NA
QBG43020.1\|2074919_2075693_-	Phage late control gene D protein (GPD)	R9TNM7	Vibrio_phage	9.2e-28	30.7
QBG43021.1\|2076082_2076472_-	Phage P2 GpU	E5FFG4	Burkholderia_phage	1.0e-14	37.9
QBG43022.1\|2076507_2078148_-	hypothetical protein	A0A2I7R3J9	Vibrio_phage	1.2e-19	29.3
QBG43023.1\|2078256_2078538_-	hypothetical protein	NA	NA	NA	NA
QBG43024.1\|2078550_2079063_-\|tail	Phage tail tube protein FII	NA	NA	NA	NA
QBG43025.1\|2079080_2080583_-\|tail	Phage tail sheath protein	R9TMQ0	Vibrio_phage	5.5e-69	33.5
QBG43026.1\|2080579_2080969_-	hypothetical protein	A0A2H4EXG4	Aeromonas_phage	9.4e-05	30.8
QBG43027.1\|2080968_2082153_-	hypothetical protein	J9QDX3	Clostridium_phage	2.5e-16	35.2
QBG43028.1\|2082145_2082772_-\|tail	Phage tail protein	A0A193GYD1	Enterobacter_phage	2.0e-25	38.8
QBG43029.1\|2082774_2083695_-\|plate	Baseplate J-like protein	D5LGZ3	Escherichia_phage	6.4e-68	47.8
QBG43030.1\|2083691_2084081_-	Gene 25-like lysozyme	D4HTV2	Vibrio_phage	2.1e-20	51.6
QBG43031.1\|2084035_2084938_-\|plate	Phage-related baseplate assembly protein	NA	NA	NA	NA
QBG43032.1\|2084918_2085455_-	hypothetical protein	NA	NA	NA	NA
QBG43033.1\|2085451_2086132_-	hypothetical protein	NA	NA	NA	NA
QBG43034.1\|2086163_2086544_-	hypothetical protein	NA	NA	NA	NA
QBG43035.1\|2086540_2086960_-	hypothetical protein	NA	NA	NA	NA
QBG43036.1\|2086994_2088029_-\|capsid	Phage major capsid protein E	A0A2I6TCE5	Escherichia_phage	6.6e-106	56.5
QBG43037.1\|2088087_2088417_-\|head	Bacteriophage lambda head decoration protein D	A0A2R9YJN3	Escherichia_phage	2.0e-08	39.5
QBG43038.1\|2088416_2089724_-\|protease	protease IV	A0A2I6TC87	Escherichia_phage	4.9e-106	53.7
QBG43039.1\|2089723_2091298_-\|portal	Phage portal protein, lambda family	E4WL21	Enterobacteria_phage	8.6e-190	64.0
QBG43040.1\|2091294_2091528_-	gpW	NA	NA	NA	NA
QBG43041.1\|2091527_2093408_-\|tail	putative tail fiber assembly protein	A0A1I9KF19	Aeromonas_phage	1.1e-191	53.2
QBG43042.1\|2093376_2093943_-	hypothetical protein	A0A1I9KFT4	Aeromonas_phage	2.9e-31	46.2
QBG43043.1\|2094311_2094557_+	hypothetical protein	NA	NA	NA	NA
QBG43044.1\|2094818_2095298_-	hypothetical protein	A0A222YWL8	Escherichia_phage	4.6e-62	68.8
QBG43045.1\|2095297_2095570_-	hypothetical protein	A0A0A0YPY6	Escherichia_phage	9.8e-09	42.9
QBG43046.1\|2095569_2095953_-	hypothetical protein	NA	NA	NA	NA
QBG43047.1\|2096065_2096737_-	Phage antitermination protein Q	Q7Y3X2	Yersinia_phage	1.9e-16	33.5
QBG43048.1\|2096736_2097030_-	hypothetical protein	A0A0U2KD41	Escherichia_phage	3.3e-34	70.5
QBG43049.1\|2097026_2097623_-	hypothetical protein	H9C173	Pectobacterium_phage	1.5e-70	64.1

DBSCAN-SWA_6

2105991 : 2118160

Pectobacterium_phage(66.67%)

integrase

attL 2097959:2097973|attR 2119935:2119949

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2097959:2097973	attL	NA	NA	NA	NA
QBG43059.1\|2105991_2106780_-	ORF6N domain protein	A0A0P0ZC44	Stx2-converting_phage	1.1e-39	69.8
QBG43060.1\|2107052_2107274_-	hypothetical protein	NA	NA	NA	NA
QBG43061.1\|2107348_2107465_-	hypothetical protein	NA	NA	NA	NA
QBG43062.1\|2107461_2107686_-	hypothetical protein	NA	NA	NA	NA
QBG43063.1\|2107682_2107994_-	hypothetical protein	A0A222YXX1	Escherichia_phage	1.2e-34	65.7
QBG43064.1\|2107990_2108227_-	hypothetical protein	NA	NA	NA	NA
QBG43065.1\|2108228_2108639_-	hypothetical protein	NA	NA	NA	NA
QBG43066.1\|2108677_2110093_-	primosome	H9C165	Pectobacterium_phage	6.6e-173	66.7
QBG43067.1\|2110082_2110838_-	hypothetical protein	H9C164	Pectobacterium_phage	2.4e-41	68.5
QBG43068.1\|2110834_2111059_-	hypothetical protein	H9C163	Pectobacterium_phage	6.1e-17	54.1
QBG43069.1\|2111098_2111575_-	phage protein YdaT	H9C162	Pectobacterium_phage	1.9e-23	48.6
QBG43070.1\|2111633_2111864_-	hypothetical protein	H6WRX5	Salmonella_phage	1.5e-21	63.2
QBG43071.1\|2111962_2112376_+	DicA DNA-binding transcriptional repressor	A0A1B5FPF4	Escherichia_phage	8.7e-09	49.1
QBG43072.1\|2113386_2113707_+	hypothetical protein	NA	NA	NA	NA
QBG43073.1\|2113737_2115954_+	exonuclease VIII	H9C157	Pectobacterium_phage	4.7e-101	35.6
QBG43074.1\|2115950_2116520_+	hypothetical protein	H9C156	Pectobacterium_phage	6.1e-37	49.2
QBG43075.1\|2116519_2116702_+	hypothetical protein	NA	NA	NA	NA
QBG43076.1\|2116911_2117175_+	hypothetical protein	H9C153	Pectobacterium_phage	1.2e-06	38.0
QBG43077.1\|2117143_2118160_+\|integrase	Phage integrase family protein	H9C152	Pectobacterium_phage	1.1e-126	63.6
2119935:2119949	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2271682 : 2278134

Acidithiobacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG43213.1\|2271682_2273224_+	Integrase core domain protein	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
QBG43214.1\|2273238_2273985_+	putative DNA replication protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
QBG43215.1\|2274148_2274418_+	hypothetical protein	NA	NA	NA	NA
QBG43216.1\|2274433_2274844_+	hypothetical protein	NA	NA	NA	NA
QBG43217.1\|2275064_2275883_+	hypothetical protein	A0A2C9CX26	Yersinia_phage	8.8e-45	38.6
QBG43218.1\|2275882_2276128_+	hypothetical protein	NA	NA	NA	NA
QBG43219.1\|2276221_2276695_+	phage protein YafX	A0A2D0W9W4	Bordetella_phage	4.3e-12	33.1
QBG43220.1\|2276710_2277187_+	putative DNA repair protein	NA	NA	NA	NA
QBG43221.1\|2277249_2277471_+	uncharacterized protein YeeT	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
QBG43222.1\|2277489_2278134_+	hypothetical protein	A0A2I6PI07	Pseudomonas_phage	1.8e-24	32.9

DBSCAN-SWA_8

2308937 : 2315240

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG43255.1\|2308937_2309480_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.0e-50	61.8
QBG43256.1\|2309484_2310363_-	dTDP-glucose pyrophosphorylase	I7I009	Enterobacteria_phage	6.6e-107	64.5
QBG43257.1\|2310420_2311320_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	1.7e-28	34.8
QBG43258.1\|2311319_2312405_-	RmlB	I7HTA3	Enterobacteria_phage	8.8e-101	53.9
QBG43259.1\|2312777_2313671_-	putative uridylyltransferase subunit with GalU	A0A127AW70	Bacillus_phage	3.0e-46	42.0
QBG43260.1\|2313845_2315240_-	putative colanic acid biosynthesis protein	A0A291LBB9	Klebsiella_phage	6.3e-19	33.0

DBSCAN-SWA_9

2409416 : 2418861

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG43332.1\|2409416_2410553_+	hypothetical protein	Q9EYF7	Enterobacteria_phage	6.1e-161	96.7
QBG43333.1\|2410549_2412553_+	YehQ	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
QBG43334.1\|2412677_2413139_+	hypothetical protein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
QBG43335.1\|2413179_2413650_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
QBG43336.1\|2413696_2414416_-	putative response regulator in two-component system with YpdA	NA	NA	NA	NA
QBG43337.1\|2414412_2416098_-	putative sensory kinase in two-component system with YpdB	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
QBG43338.1\|2416319_2417051_+	MlrA DNA binding transcriptional activator	Q9EYF2	Enterobacteria_phage	6.3e-111	98.5
QBG43339.1\|2417110_2417218_+	putative small membrane protein	NA	NA	NA	NA
QBG43340.1\|2417198_2417930_-	YehW/YehX/YehY/YehZ ABC transporter	NA	NA	NA	NA
QBG43341.1\|2417934_2418861_-	YehW/YehX/YehY/YehZ ABC transporter	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	26.8

DBSCAN-SWA_10

2995452 : 3002592

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG43854.1\|2995452_2998014_+	MutHLS complex, methyl-directed mismatch repair	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
QBG43855.1\|2998119_2998776_+	protein-tyrosine-phosphatase / phosphoprotein phosphatase	A0A077SLQ6	Escherichia_phage	3.3e-50	46.1
QBG43856.1\|2998826_2999594_-	putative DNA-binding transcriptional regulator, DEOR-type	A0A077SK06	Escherichia_phage	9.7e-70	57.4
QBG43857.1\|2999789_3000698_+	putative dehydrogenase, with NAD(P)-binding Rossmann-fold domain	A0A077SLF7	Escherichia_phage	1.9e-117	76.2
QBG43858.1\|3000694_3001957_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
QBG43859.1\|3001953_3002592_+	putative class II aldolase	A0A077SK32	Escherichia_phage	1.4e-82	74.5

DBSCAN-SWA_11

4378475 : 4456626

Escherichia_phage(38.1%)

head,tRNA,tail,plate,protease,capsid,holin,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG45127.1\|4378475_4378913_+\|tRNA	D-Tyr-tRNATyr deacylase	NA	NA	NA	NA
QBG45128.1\|4378957_4379899_+	putative acetyltransferase	NA	NA	NA	NA
QBG45129.1\|4379962_4380871_-	acetyl esterase	NA	NA	NA	NA
QBG45130.1\|4381099_4381411_+	Toxin HigB-2	NA	NA	NA	NA
QBG45131.1\|4381411_4381702_+	Antitoxin igA-2	NA	NA	NA	NA
QBG45132.1\|4381786_4381999_+	hypothetical protein	NA	NA	NA	NA
QBG45133.1\|4382060_4382339_+	hypothetical protein	NA	NA	NA	NA
QBG45134.1\|4382735_4382954_+	putative transcriptional regulator	NA	NA	NA	NA
QBG45135.1\|4383138_4383879_-	hypothetical protein	NA	NA	NA	NA
QBG45136.1\|4383903_4384752_-	hypothetical protein	NA	NA	NA	NA
QBG45137.1\|4385041_4385284_+	hypothetical protein	NA	NA	NA	NA
QBG45138.1\|4385465_4386395_-	formate dehydrogenase formation protein	NA	NA	NA	NA
QBG45139.1\|4386391_4387027_-	formate dehydrogenase-O, gamma subunit	NA	NA	NA	NA
QBG45140.1\|4387023_4387926_-	formate dehydrogenase-O, beta subunit	NA	NA	NA	NA
QBG45141.1\|4387938_4390353_-	formate dehydrogenase-O, alpha subunit	NA	NA	NA	NA
QBG45142.1\|4390401_4390989_-	formate dehydrogenase-O, alpha subunit	NA	NA	NA	NA
QBG45143.1\|4391182_4392016_+	affects formate dehydrogenase-N	NA	NA	NA	NA
QBG45144.1\|4392112_4392658_+	hypothetical protein	NA	NA	NA	NA
QBG45145.1\|4393011_4394406_+	Sucrose porin precursor	NA	NA	NA	NA
QBG45146.1\|4394446_4394761_-	L-rhamnose mutarotase	NA	NA	NA	NA
QBG45147.1\|4394770_4395595_-	rhamnulose-1-phosphate aldolase monomer	NA	NA	NA	NA
QBG45148.1\|4395861_4397121_-	L-rhamnose isomerase	NA	NA	NA	NA
QBG45149.1\|4397117_4398587_-	L-rhamnulose kinase	NA	NA	NA	NA
QBG45150.1\|4398874_4399711_+	RhaS-L-rhamnose DNA-binding transcriptional activator	NA	NA	NA	NA
QBG45151.1\|4399694_4400633_+	RhaR transcriptional activator	NA	NA	NA	NA
QBG45152.1\|4400629_4401664_-	rhamnose / lyxose:H+ symporter	NA	NA	NA	NA
QBG45153.1\|4401948_4402569_+	superoxide dismutase (Mn)	Q56AR7	Bacillus_thuringiensis_phage	5.4e-63	58.9
QBG45154.1\|4402828_4403812_+	2-dehydro-3-deoxy-D-gluconate:H+ symporter	NA	NA	NA	NA
QBG45155.1\|4403960_4404635_+	protein involved in base analog detoxification	NA	NA	NA	NA
QBG45156.1\|4404805_4406179_-	EnvZ sensory histidine kinase	W8CYF6	Bacillus_phage	3.8e-16	25.9
QBG45157.1\|4406175_4406874_-	putative DNA-binding response regulator in two-component system with YedV	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
QBG45158.1\|4407023_4407524_+	regulator of the Cpx response and possible chaperone involved in resistance to extracytoplasmic stress	NA	NA	NA	NA
QBG45159.1\|4407710_4408691_-	Tyrosine recombinase XerD	S4TP66	Salmonella_phage	1.0e-185	99.7
QBG45160.1\|4408760_4409054_-	Helix-turn-helix domain protein	Q1JS37	Enterobacteria_phage	4.7e-49	99.0
QBG45161.1\|4409190_4409463_+	Regulatory phage protein cox	Q1JS36	Enterobacteria_phage	1.4e-47	100.0
QBG45162.1\|4409632_4410133_+	hypothetical protein	M1SV55	Escherichia_phage	2.6e-92	100.0
QBG45163.1\|4410196_4410421_+	hypothetical protein	S4TP68	Salmonella_phage	4.7e-33	100.0
QBG45164.1\|4410420_4410720_+	hypothetical protein	S4TUD1	Salmonella_phage	8.4e-46	100.0
QBG45165.1\|4410722_4410947_+	hypothetical protein	A0A0F7LDI3	Escherichia_phage	2.5e-34	95.9
QBG45166.1\|4410943_4411219_+	hypothetical protein	U5N3W1	Enterobacteria_phage	1.9e-44	98.9
QBG45167.1\|4411291_4413484_+	Bacteriophage replication gene A protein (GPA)	Q858T4	Yersinia_virus	0.0e+00	97.5
QBG45168.1\|4414621_4415107_+	hypothetical protein	Q854W5	Mycobacterium_virus	6.0e-09	37.1
QBG45169.1\|4415173_4415773_+	hypothetical protein	NA	NA	NA	NA
QBG45170.1\|4415855_4416797_-	hypothetical protein	Q2P9W7	Enterobacteria_phage	2.0e-133	73.7
QBG45171.1\|4417223_4418258_-\|portal	Phage portal protein	M1SV64	Escherichia_phage	1.9e-201	99.7
QBG45172.1\|4418257_4420030_-	Terminase-like family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
QBG45173.1\|4420202_4421057_+\|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	Q94MB7	Escherichia_virus	2.7e-137	88.0
QBG45174.1\|4421115_4422189_+\|capsid	Phage major capsid protein	Q94MI3	Enterobacteria_phage	3.7e-200	98.9
QBG45175.1\|4422192_4422936_+\|terminase	Phage small terminase subunit	Q858W5	Yersinia_virus	2.7e-125	98.8
QBG45176.1\|4423034_4423544_+\|head	Phage head completion protein (GPL)	U5N0S3	Enterobacteria_phage	1.1e-90	100.0
QBG45177.1\|4423543_4423747_+	Phage Tail Protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
QBG45178.1\|4423750_4424032_+\|holin	Phage holin family 2	A0A0F7LA12	Escherichia_phage	1.3e-43	100.0
QBG45179.1\|4424031_4424529_+	Phage lysozyme	A0A0F7LBS0	Escherichia_phage	3.1e-93	100.0
QBG45180.1\|4424543_4424969_+	hypothetical protein	U5N096	Enterobacteria_phage	1.7e-60	98.6
QBG45181.1\|4424956_4425382_+	hypothetical protein	Q858W0	Yersinia_virus	2.7e-66	97.9
QBG45182.1\|4425368_4425527_+	hypothetical protein	M1RZ27	Escherichia_phage	2.6e-22	100.0
QBG45183.1\|4425489_4425957_+\|tail	P2 phage tail completion protein R (GpR)	Q7Y4E0	Escherichia_virus	2.5e-81	98.7
QBG45184.1\|4425949_4426402_+	Phage virion morphogenesis family protein	A0A0F7LBV9	Escherichia_phage	3.1e-76	99.3
QBG45185.1\|4426468_4427104_+\|plate	Phage-related baseplate assembly protein	U5N3F0	Enterobacteria_phage	4.1e-114	99.5
QBG45186.1\|4427100_4427448_+	Gene 25-like lysozyme	A0A0F7LDQ1	Escherichia_phage	1.3e-58	100.0
QBG45187.1\|4427452_4428361_+\|plate	Baseplate J-like protein	A0A0F7LCJ3	Escherichia_phage	2.6e-162	99.7
QBG45188.1\|4428353_4428884_+\|tail	Phage tail protein	Q858V5	Yersinia_virus	1.3e-102	99.4
QBG45189.1\|4428894_4431513_+\|tail	putative side tail fiber assembly protein	Q858V4	Yersinia_virus	3.4e-284	73.0
QBG45190.1\|4432418_4433498_+	hypothetical protein	NA	NA	NA	NA
QBG45191.1\|4433932_4435123_+\|tail	Phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	1.6e-225	100.0
QBG45192.1\|4435135_4435654_+\|tail	Phage tail tube protein FII	A0A0F7LDZ1	Escherichia_phage	9.4e-93	99.4
QBG45193.1\|4435710_4435986_+\|tail	Phage tail protein E	A0A0F7LDQ8	Escherichia_phage	5.7e-41	100.0
QBG45194.1\|4436130_4438578_+	Chromosome partition protein Smc	Q7Y4C8	Escherichia_virus	0.0e+00	96.9
QBG45195.1\|4438592_4439072_+	Phage P2 GpU	A0A0F7LDE8	Escherichia_phage	6.6e-85	100.0
QBG45196.1\|4439071_4440235_+	Phage late control gene D protein (GPD)	U5N3V4	Enterobacteria_phage	1.4e-205	99.5
QBG45197.1\|4440316_4440535_+	DNA-binding transcriptional regulator	A0A0F7LDQ9	Escherichia_phage	4.7e-38	100.0
QBG45198.1\|4440771_4441674_+	Zn2+ / Fe2+ / Cd2+ efflux transporter FieF	NA	NA	NA	NA
QBG45199.1\|4441619_4441724_-	hypothetical protein	NA	NA	NA	NA
QBG45200.1\|4441854_4442817_+	6-phosphofructokinase-1 monomer	NA	NA	NA	NA
QBG45201.1\|4443136_4444126_+	sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp	NA	NA	NA	NA
QBG45202.1\|4444232_4444988_+	CDP-diglyceride hydrolase / CDP-diacylglycerol pyrophosphatase	NA	NA	NA	NA
QBG45203.1\|4445042_4445810_-	triose phosphate isomerase monomer	NA	NA	NA	NA
QBG45204.1\|4445917_4446517_-	hypothetical protein	NA	NA	NA	NA
QBG45205.1\|4446617_4447058_+	hypothetical protein	NA	NA	NA	NA
QBG45206.1\|4447269_4447569_+	hypothetical protein	NA	NA	NA	NA
QBG45207.1\|4447595_4448024_+	stress protein involved in resistance to UV irradiation	NA	NA	NA	NA
QBG45208.1\|4448028_4448775_-	flavodoxin NADP+ reductase	NA	NA	NA	NA
QBG45209.1\|4448871_4449882_-	fructose 1,6-bisphosphatase II	NA	NA	NA	NA
QBG45210.1\|4450052_4451561_-	glycerol kinase	NA	NA	NA	NA
QBG45211.1\|4451583_4452429_-	glycerol channel GlpF	M1HWZ0	Paramecium_bursaria_Chlorella_virus	4.4e-15	28.0
QBG45212.1\|4452859_4453099_+	cell division factor ZapB	NA	NA	NA	NA
QBG45213.1\|4453183_4453669_-	ribonuclease E inhibitor protein	NA	NA	NA	NA
QBG45214.1\|4453761_4454688_-	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA
QBG45215.1\|4454754_4456086_-\|protease	ATPase component of the HslVU protease	A0A191ZC11	Erwinia_phage	1.7e-45	29.9
QBG45216.1\|4456095_4456626_-\|protease	peptidase component of the HslVU protease	NA	NA	NA	NA

DBSCAN-SWA_12

5020871 : 5027652

Shigella_phage(33.33%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QBG45710.1\|5020871_5022869_-\|holin	choline:H+ symporter	A0A2I7QNT1	Vibrio_phage	4.4e-21	25.9
QBG45711.1\|5023023_5023842_-	IS3 element protein InsF	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
QBG45712.1\|5023877_5024180_-	putative IS protein	NA	NA	NA	NA
QBG45713.1\|5024378_5024792_+\|transposase	putative transposase	Q716C2	Shigella_phage	5.2e-62	96.5
QBG45714.1\|5024788_5025031_+	IS3 element protein InsF	Q716C2	Shigella_phage	4.7e-39	92.4
QBG45715.1\|5025113_5025371_+	hypothetical protein	NA	NA	NA	NA
QBG45716.1\|5025927_5026695_-	ferric dicitrate ABC transporter - ATP binding subunit	G3M9Y6	Bacillus_virus	6.4e-13	24.8
QBG45717.1\|5026695_5027652_-	ferric dicitrate ABC transporter - membrane subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP036244

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP036245

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection