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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP035790 Lactobacillus reuteri strain ATG-F4 chromosome, complete genome 0 crisprs RT,cas14j,cas3,PrimPol,csa3,DEDDh 0 0 139 0

Results visualization

1. CP035790
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 15242 13 Lactobacillus_phage(83.33%) tail,holin NA
DBSCAN-SWA_2 22426 : 30420 6 Staphylococcus_phage(33.33%) integrase attL 25062:25079|attR 27243:27260
DBSCAN-SWA_3 35071 : 39147 5 Staphylococcus_phage(80.0%) NA NA
DBSCAN-SWA_4 45695 : 53088 7 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 60904 : 62668 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_6 75258 : 79523 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_7 82815 : 83478 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_8 88501 : 89413 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_9 93217 : 95995 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_10 99260 : 104568 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_11 110639 : 116984 6 Ostreococcus_tauri_virus(33.33%) NA NA
DBSCAN-SWA_12 127108 : 128491 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_13 131623 : 137482 7 Lactobacillus_phage(50.0%) transposase NA
DBSCAN-SWA_14 150149 : 151229 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_15 154255 : 162034 6 Bacillus_phage(33.33%) integrase,transposase attL 149666:149680|attR 154940:154954
DBSCAN-SWA_16 177483 : 178260 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_17 181758 : 183141 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_18 191244 : 245444 41 Lactococcus_phage(33.33%) transposase NA
DBSCAN-SWA_19 253395 : 254241 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_20 258133 : 339219 97 Lactobacillus_phage(53.66%) portal,integrase,terminase,tail,capsid,transposase,tRNA,head,protease attL 331918:331933|attR 341928:341943
DBSCAN-SWA_21 347358 : 348060 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_22 356645 : 366193 8 Acanthamoeba_castellanii_mimivirus(25.0%) tRNA NA
DBSCAN-SWA_23 371132 : 373323 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_24 385925 : 387431 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_25 399976 : 405038 4 Catovirus(33.33%) tRNA NA
DBSCAN-SWA_26 408525 : 408936 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_27 412157 : 414332 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_28 421748 : 429446 7 Agrobacterium_phage(25.0%) NA NA
DBSCAN-SWA_29 433313 : 433634 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_30 437863 : 439246 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_31 445500 : 446809 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_32 450767 : 456473 4 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_33 459500 : 463067 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_34 469171 : 470885 2 Lactobacillus_virus(50.0%) NA NA
DBSCAN-SWA_35 476020 : 562538 63 Enterococcus_phage(17.39%) transposase,tRNA,protease NA
DBSCAN-SWA_36 569485 : 572218 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_37 582633 : 585268 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_38 594673 : 609400 13 Bacillus_phage(14.29%) NA NA
DBSCAN-SWA_39 617896 : 634056 10 Pseudomonas_phage(16.67%) integrase attL 624451:624493|attR 626528:626570
DBSCAN-SWA_40 638553 : 645414 5 Ralstonia_phage(33.33%) NA NA
DBSCAN-SWA_41 648996 : 650666 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_42 666870 : 668958 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 672232 : 688134 9 Phaeocystis_globosa_virus(16.67%) transposase,protease NA
DBSCAN-SWA_44 692704 : 692905 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_45 697210 : 697951 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_46 718840 : 720235 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_47 724882 : 725476 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_48 745870 : 746785 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 760425 : 761181 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_50 778608 : 802201 28 Streptococcus_phage(42.86%) integrase,transposase,protease attL 781343:781357|attR 808999:809013
DBSCAN-SWA_51 805772 : 817332 10 Streptococcus_phage(33.33%) transposase NA
DBSCAN-SWA_52 823412 : 824426 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_53 830465 : 831038 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_54 837833 : 839731 2 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_55 843520 : 846794 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_56 851505 : 857730 6 Enterococcus_phage(33.33%) NA NA
DBSCAN-SWA_57 862325 : 868483 6 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_58 872122 : 878257 5 Streptococcus_phage(66.67%) transposase NA
DBSCAN-SWA_59 886608 : 891341 3 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_60 902935 : 903739 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_61 940269 : 940977 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_62 951661 : 954723 2 Cyanophage(50.0%) NA NA
DBSCAN-SWA_63 962135 : 963128 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_64 971100 : 975529 5 Lactobacillus_phage(33.33%) NA NA
DBSCAN-SWA_65 978530 : 979454 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_66 982501 : 988484 6 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_67 998079 : 1001111 3 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_68 1004344 : 1013006 10 Streptomyces_phage(20.0%) NA NA
DBSCAN-SWA_69 1016050 : 1020658 3 Enterobacteria_phage(50.0%) tRNA NA
DBSCAN-SWA_70 1029245 : 1031375 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_71 1041588 : 1053596 12 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_72 1057030 : 1058836 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_73 1066152 : 1067289 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_74 1073885 : 1087667 12 Phaeocystis_globosa_virus(16.67%) transposase,tRNA NA
DBSCAN-SWA_75 1091727 : 1092606 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_76 1100932 : 1101802 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_77 1113778 : 1115123 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_78 1121102 : 1121966 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_79 1126514 : 1128434 1 Mimivirus(100.0%) NA NA
DBSCAN-SWA_80 1136452 : 1150501 12 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_81 1153533 : 1163239 8 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_82 1173589 : 1174288 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_83 1179238 : 1184507 4 Only_Syngen_Nebraska_virus(50.0%) protease NA
DBSCAN-SWA_84 1194430 : 1198609 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_85 1206738 : 1207404 1 Alteromonas_phage(100.0%) NA NA
DBSCAN-SWA_86 1211584 : 1213955 3 Lactococcus_phage(50.0%) transposase NA
DBSCAN-SWA_87 1218108 : 1224715 7 Staphylococcus_virus(25.0%) transposase NA
DBSCAN-SWA_88 1244329 : 1250623 6 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_89 1256301 : 1260086 3 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_90 1266797 : 1269420 3 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_91 1273776 : 1283755 9 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_92 1292612 : 1306880 13 Prochlorococcus_phage(25.0%) NA NA
DBSCAN-SWA_93 1310506 : 1311757 1 Cronobacter_phage(100.0%) tRNA NA
DBSCAN-SWA_94 1323085 : 1326525 3 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_95 1331062 : 1331803 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_96 1338839 : 1349216 9 Staphylococcus_phage(25.0%) protease NA
DBSCAN-SWA_97 1353791 : 1354562 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_98 1359286 : 1368133 8 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_99 1372003 : 1373458 2 Anguillid_herpesvirus(50.0%) NA NA
DBSCAN-SWA_100 1378055 : 1382156 3 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_101 1386844 : 1457919 62 Pseudomonas_phage(14.29%) transposase,tRNA,protease NA
DBSCAN-SWA_102 1464738 : 1471922 5 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_103 1476718 : 1487649 12 Pandoravirus(20.0%) tRNA NA
DBSCAN-SWA_104 1494389 : 1495511 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_105 1502940 : 1513891 13 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_106 1519672 : 1526766 6 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_107 1531192 : 1538008 6 Staphylococcus_virus(25.0%) transposase NA
DBSCAN-SWA_108 1544448 : 1546474 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_109 1555219 : 1556134 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_110 1559486 : 1560419 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_111 1563466 : 1565191 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_112 1568625 : 1577521 5 uncultured_Mediterranean_phage(25.0%) protease NA
DBSCAN-SWA_113 1583090 : 1586194 2 Streptococcus_phage(50.0%) transposase NA
DBSCAN-SWA_114 1590611 : 1598117 9 Lactococcus_phage(25.0%) tRNA NA
DBSCAN-SWA_115 1605660 : 1615007 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_116 1619539 : 1619998 1 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_117 1625820 : 1627758 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_118 1631807 : 1633055 1 Burkholderia_virus(100.0%) transposase NA
DBSCAN-SWA_119 1648796 : 1653718 5 Enterococcus_phage(25.0%) NA NA
DBSCAN-SWA_120 1658450 : 1659722 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_121 1675975 : 1677400 1 Aichi_virus(100.0%) NA NA
DBSCAN-SWA_122 1681985 : 1697053 14 Staphylococcus_phage(14.29%) transposase NA
DBSCAN-SWA_123 1700107 : 1711772 7 Pacmanvirus(25.0%) tRNA NA
DBSCAN-SWA_124 1718957 : 1719608 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_125 1726443 : 1735777 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_126 1740144 : 1749654 10 Tupanvirus(25.0%) tRNA NA
DBSCAN-SWA_127 1763580 : 1764189 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_128 1774376 : 1775624 1 Burkholderia_virus(100.0%) transposase NA
DBSCAN-SWA_129 1794604 : 1796935 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_130 1811584 : 1814380 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_131 1820498 : 1824020 2 Virus_Rctr197k(50.0%) NA NA
DBSCAN-SWA_132 1836784 : 1843481 9 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_133 1847192 : 1848620 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_134 1853940 : 1859050 5 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_135 1864093 : 1944597 83 Staphylococcus_phage(12.5%) integrase,transposase,terminase,tail,capsid,head,tRNA,portal,protease attL 1897827:1897886|attR 1939494:1940266
DBSCAN-SWA_136 1949141 : 1950149 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_137 1956183 : 1959193 2 Helicobacter_phage(50.0%) NA NA
DBSCAN-SWA_138 1965411 : 1978246 11 Streptomyces_phage(25.0%) integrase attL 1957858:1957875|attR 1981969:1981986
DBSCAN-SWA_139 1982738 : 2036829 69 Lactobacillus_phage(28.0%) transposase,terminase,tail,capsid,head,tRNA,portal NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage