CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025233	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1925 plasmid pSNE1-1925, complete sequence	0 crisprs	NA	0	0	0	0
CP025232	Salmonella enterica subsp. enterica serovar Newport str. USDA-ARS-USMARC-1925 chromosome, complete genome	2 crisprs	WYL,csa3,cas3,cas14j,DEDDh,DinG,c2c9_V-U4	0	34	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025232_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025232_1

974710-975957

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGN	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

20 spacers

The CRISPR arrays of CP025232_1

>merge|CP025232|1|974710-975957|CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTGGCGGCAAAAGAACTCGCTAAATGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTGCGGCAGCGCGCAATCGAGACACGCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCACAAAACGCCAGTGGCATGGTACAACCCGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGACCATGTTTAACTCTAAATCAGGCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCATGCTTTCGACTAAATACTACCGCGACAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATAACAACATTATCAGTGTGAAAAGTCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATATGAAAAACGTAAAAATTTACACCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGAAGAACGGCCAGCCCGTCGAGGTATCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGTCGTTGCTGGACAGAACTCCGGGGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTACGGGCATGGACGGCTCGTACAGTTTTGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTCCGCTTCTGGTAGTGCTTCCAGACCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATAGGACAGCCATTCGAGCGCCCAGAGTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGTATGCACTGCTTGATAAAGTCAGGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACTAACGTCTATAGCTAAATGTAGAGAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTTTGGAGTCAATGTTATTTCTTCAGGTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCGCTGGTTGCTCCAACTCCTGATATGCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAAATCTTCTTTCATATAACCGTAAGGGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTGCTCTATGTCTAAAAATAAAAGCGGTTCGTGTTCCCTGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCAAGTGTTCCCCGCGCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGTGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025232|1|1|974710-975957|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAGAACGGCCAGCCCGTCGAGGTATCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGTCGTTGCTGGACAGAACTCCGGGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACGGGCATGGACGGCTCGTACAGTTTTGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCCGCTTCTGGTAGTGCTTCCAGACCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCA
AGTGTTCCCCGCGCAGCGGGGATAAACCG	GGGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025232|1|1|974710-975957|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTGGCGGCAAAAGAACTCGCTAAATGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTGCGGCAGCGCGCAATCGAGACACGCCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAGAACGGCCAGCCCGTCGAGGTATCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGTCGTTGCTGGACAGAACTCCGGGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACGGGCATGGACGGCTCGTACAGTTTTGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCCGCTTCTGGTAGTGCTTCCAGACCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCAGCGGGGATAAACCGG	GGATCGCGCTGGCGGTCGCATCCGTTGCCGT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP025232|1|1|974832-975896|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACAAAACGCCAGTGGCATGGTACAACCCGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTGACCATGTTTAACTCTAAATCAGGCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATGCTTTCGACTAAATACTACCGCGACAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACAACATTATCAGTGTGAAAAGTCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATATGAAAAACGTAAAAATTTACACCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAAGAACGGCCAGCCCGTCGAGGTATCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGTCGTTGCTGGACAGAACTCCGGGGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACGGGCATGGACGGCTCGTACAGTTTTGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCTCCGCTTCTGGTAGTGCTTCCAGACCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATAGGACAGCCATTCGAGCGCCCAGAGTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAGTATGCACTGCTTGATAAAGTCAGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACTAACGTCTATAGCTAAATGTAGAGAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTTTGGAGTCAATGTTATTTCTTCAGGTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGCTGGTTGCTCCAACTCCTGATATGCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAAAATCTTCTTTCATATAACCGTAAGGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTGCTCTATGTCTAAAAATAAAAGCGGTTC
GTGTTCCCTGCGCCAGCGGGGATAAACCC	AGCACAATCATTATTAGATGAACTTTCATCAA
GTGTTCCCCGCGCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025232.1\|QAZ08035.1\|982259_983213_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025232.1\|QAZ08036.1\|985815_986862_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025232.1\|QAZ08032.1\|979524_981237_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP025232.1\|QAZ08020.1\|963787_964258_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP025232.1\|QAZ08031.1\|977725_979525_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP025232.1\|QAZ11605.1\|977230_977401_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP025232.1\|QAZ08025.1\|969559_970360_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP025232.1\|QAZ08019.1\|963254_963791_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP025232.1\|QAZ08026.1\|970587_972225_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
CP025232.1\|QAZ08024.1\|968363_968951_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP025232.1\|QAZ08021.1\|964272_964779_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP025232.1\|QAZ08037.1\|987112_988021_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP025232.1\|QAZ08029.1\|976054_976852_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP025232.1\|QAZ08028.1\|973741_974413_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP025232.1\|QAZ08033.1\|981312_982047_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025232.1\|QAZ08027.1\|972307_973606_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP025232.1\|QAZ08030.1\|976939_977302_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP025232.1\|QAZ08034.1\|981935_982178_-\|hypothetical-protein	unknown	unknown	unknown
CP025232.1\|QAZ08022.1\|964798_965572_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP025232.1\|QAZ08023.1\|965584_968284_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176

Protein	Function_ID	Function_description	E-value
CP025232.1\|QAZ08036.1\|985815_986862_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025232.1\|QAZ08032.1\|979524_981237_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP025232.1\|QAZ08020.1\|963787_964258_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
CP025232.1\|QAZ08031.1\|977725_979525_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP025232.1\|QAZ08035.1\|982259_983213_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025232.1\|QAZ08025.1\|969559_970360_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP025232.1\|QAZ08019.1\|963254_963791_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	1.00241e-120
CP025232.1\|QAZ08026.1\|970587_972225_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP025232.1\|QAZ08024.1\|968363_968951_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP025232.1\|QAZ08021.1\|964272_964779_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	4.31975e-105
CP025232.1\|QAZ08037.1\|987112_988021_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025232.1\|QAZ08029.1\|976054_976852_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
CP025232.1\|QAZ08028.1\|973741_974413_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP025232.1\|QAZ08033.1\|981312_982047_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
CP025232.1\|QAZ08027.1\|972307_973606_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025232.1\|QAZ08030.1\|976939_977302_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP025232.1\|QAZ08022.1\|964798_965572_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP025232.1\|QAZ08023.1\|965584_968284_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0

>CP025232.1|QAZ08028.1|973741_974413_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025232.1|QAZ08027.1|972307_973606_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP025232.1|QAZ08026.1|970587_972225_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRNEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP025232.1|QAZ08025.1|969559_970360_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP025232.1|QAZ08024.1|968363_968951_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP025232.1|QAZ08023.1|965584_968284_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESSYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKILEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP025232.1|QAZ08022.1|964798_965572_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP025232.1|QAZ08021.1|964272_964779_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP025232.1|QAZ08020.1|963787_964258_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP025232.1|QAZ08019.1|963254_963791_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFKLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ
>CP025232.1|QAZ08029.1|976054_976852_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP025232.1|QAZ08030.1|976939_977302_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP025232.1|QAZ11605.1|977230_977401_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVWQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP025232.1|QAZ08031.1|977725_979525_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP025232.1|QAZ08032.1|979524_981237_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP025232.1|QAZ08033.1|981312_982047_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025232.1|QAZ08034.1|981935_982178_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNHPSCSPHSRFSPKKRVSSSAIPGSHLRVVCVSPTDR
>CP025232.1|QAZ08035.1|982259_983213_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025232.1|QAZ08036.1|985815_986862_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVLDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP025232.1|QAZ08037.1|987112_988021_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF

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Crispr_ID: CP025232_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025232_2

983901-985801

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

31 spacers

The CRISPR arrays of CP025232_2

>merge|CP025232|2|983901-985801|PILER-CR,CRISPRCasFinder,CRT,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGCGCCCGGATTGTTTGCGTGCGGCGACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATTTACCCGCCACTTATTCCCCATTGCATGTGTTCCCCGCGCCAGCGGGGATAAATCGGGACTATCAAACCATCTATGATGCCAATTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGGGGCTGGTATTCGATACAGACCCGGCTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAATAAAAATGAATTTGAGTCAACTCTATAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTAGGCTGCGGTTGGGCACCGAAGAAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTATCCCGGAAATCGTGATCAACTACGCAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCATTCCCGATCGTCAACCAGAGAACTGGCACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCCGCGCCCGTGAGCTCGATATGCTCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGTTATTGCGGTAACGGATAATTTATCATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGGCGATCGCATTTGGGTGCGGGAAACATTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAATATGGTGATAATGTTGCACCTTCGCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACTCGGCCTGTTTTTTGATTTTGACAATCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAATAACCGACGAGGGCAAACGCCGTGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGAAAATCAGCCCGCATATTCCGACACAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGTGGTTTTAGGTTGTCGGTGCTGATCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAACAACAGGATTTTGCAATTACTGTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGGCAGCAGCGTGAAACACGTCAGTATTGTGTTCCCCGCGCCAGCGGGGATAAACCACCAATAACCGAAATATCCACGGTGGAAATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCTGTTCCATACTCACCCCCTGTGCAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATGTATGCCGCGACGATCGAGAGCGAACTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCAGATGAAAAATATTTACAGATTGGTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCGAAAACGCGCTTTGAAATTCGCACGGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAAATCCCGCTGACAATATTTTGCCACCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGACGACCCGATGGGGATCCTGCCGTTGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGCTTGTTAATATTTCTCTCACTGACTACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAAAACTATCTCTATCGCAGGCTGGATATGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAAAGGTACTCCCATATCTCCAGCCAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAGTTACGCCAGTGCGGGCGTGTTGCTCATCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025232|2|2|983901-985800|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATC	GGGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACC	ACCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGGAGTATTTGAAATGTACTATAAGGACTTCAT
GTGTTCCCCGCGCCAGTTCTTCAGCTGG	CAACGACAGAATGCGTGTTCCCCGCG
CCAGCGGGGATAAACCGGGGGCTTGTTA	ATATTTCTCTCACTGACTACGGTGTTCCCCGCG
CCAGCGGGGATAAACCGCCGGAAAACTA	TCTCTATCGCAGGCTGGATATGTGTTCCCCGCG
CCAGCGGGGATAAACCGTTCCAAAGGTA	CTCCCATATCTCCAGCCAACGGTGTTCCCCGCG
CCAGCGGGGATAAACCGTAAGTTACGCC	AGTGCGGGCGTGTTGCTCATCGTGTTCCCCGCG
CCAGCGGGGATAAACA

>CP025232|2|2|983901-985455|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCTTGTTAATATTTCTCTCACTGACTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC


>CP025232|2|2|983901-985454|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCTTGTTAATATTTCTCTCACTGACTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC


>CP025232|2|3|985529-985801|CRISPRCasFinder
	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCTTGTTAATATTTCTCTCACTGACTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP025232|2|3|985529-985801|CRT
	TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATTTACCCGCCACTTATTCCCCATTGCAT
GTGTTCCCCGCGCCAGCGGGGATAAATCG	GGACTATCAAACCATCTATGATGCCAATTTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGGGGCTGGTATTCGATACAGACCCGGCTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAATAAAAATGAATTTGAGTCAACTCTATAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTATCCCGGAAATCGTGATCAACTACGCAGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCATTCCCGATCGTCAACCAGAGAACTGGCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCCGCGCCCGTGAGCTCGATATGCTCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGTTATTGCGGTAACGGATAATTTATCATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGGCGATCGCATTTGGGTGCGGGAAACATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAATATGGTGATAATGTTGCACCTTCGCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCGGCCTGTTTTTTGATTTTGACAATCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAATAACCGACGAGGGCAAACGCCGTGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGAAAATCAGCCCGCATATTCCGACACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAACAACAGGATTTTGCAATTACTGTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGGCAGCAGCGTGAAACACGTCAGTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCA	CCAATAACCGAAATATCCACGGTGGAAATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTGTTCCATACTCACCCCCTGTGCAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATGTATGCCGCGACGATCGAGAGCGAACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGCAGATGAAAAATATTTACAGATTGGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGCGAAAACGCGCTTTGAAATTCGCACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAAATCCCGCTGACAATATTTTGCCACCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGACGACCCGATGGGGATCCTGCCGTTGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTATTTGAAATGTACTATAAGGACTTCATGTGTTCCCCGCGCCAGTTCTTCAGCTGGCAACGACAGAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGCTTGTTAATATTTCTCTCACTGACTACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAAAGGTACTCCCATATCTCCAGCCAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025232.1\|QAZ08036.1\|985815_986862_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP025232.1\|QAZ08039.1\|989456_990062_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP025232.1\|QAZ08038.1\|988030_989470_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP025232.1\|QAZ08043.1\|991666_992146_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP025232.1\|QAZ08033.1\|981312_982047_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP025232.1\|QAZ11605.1\|977230_977401_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP025232.1\|QAZ08044.1\|992142_993192_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP025232.1\|QAZ08032.1\|979524_981237_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP025232.1\|QAZ08045.1\|993172_993934_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP025232.1\|QAZ08041.1\|990626_990938_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP025232.1\|QAZ08035.1\|982259_983213_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP025232.1\|QAZ08031.1\|977725_979525_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP025232.1\|QAZ08037.1\|987112_988021_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP025232.1\|QAZ08029.1\|976054_976852_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP025232.1\|QAZ08042.1\|990956_991667_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP025232.1\|QAZ08027.1\|972307_973606_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP025232.1\|QAZ08030.1\|976939_977302_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP025232.1\|QAZ08034.1\|981935_982178_-\|hypothetical-protein	unknown	unknown	unknown
CP025232.1\|QAZ08028.1\|973741_974413_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP025232.1\|QAZ08040.1\|990079_990436_+\|DUF3561-domain-containing-protein	unknown	unknown	gnl\|CDD\|371891

Protein	Function_ID	Function_description	E-value
CP025232.1\|QAZ08036.1\|985815_986862_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP025232.1\|QAZ08039.1\|989456_990062_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP025232.1\|QAZ08038.1\|988030_989470_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP025232.1\|QAZ08043.1\|991666_992146_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP025232.1\|QAZ08033.1\|981312_982047_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40417e-137
CP025232.1\|QAZ08044.1\|992142_993192_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP025232.1\|QAZ08032.1\|979524_981237_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP025232.1\|QAZ08045.1\|993172_993934_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	4.6895e-146
CP025232.1\|QAZ08041.1\|990626_990938_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP025232.1\|QAZ08035.1\|982259_983213_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP025232.1\|QAZ08031.1\|977725_979525_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP025232.1\|QAZ08037.1\|987112_988021_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP025232.1\|QAZ08029.1\|976054_976852_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	5.39566e-102
CP025232.1\|QAZ08042.1\|990956_991667_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.96864e-119
CP025232.1\|QAZ08027.1\|972307_973606_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP025232.1\|QAZ08030.1\|976939_977302_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP025232.1\|QAZ08028.1\|973741_974413_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP025232.1\|QAZ08040.1\|990079_990436_+\|DUF3561-domain-containing-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49

>CP025232.1|QAZ08035.1|982259_983213_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP025232.1|QAZ08034.1|981935_982178_-|hypothetical-protein
MLLGTHSLAAFKQLELFWVYNQFKIRLPAGFFIAASIIIPRKDNHPSCSPHSRFSPKKRVSSSAIPGSHLRVVCVSPTDR
>CP025232.1|QAZ08033.1|981312_982047_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRTDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP025232.1|QAZ08032.1|979524_981237_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP025232.1|QAZ08031.1|977725_979525_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASSQAETENEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP025232.1|QAZ11605.1|977230_977401_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVWQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP025232.1|QAZ08030.1|976939_977302_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP025232.1|QAZ08029.1|976054_976852_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP025232.1|QAZ08028.1|973741_974413_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP025232.1|QAZ08027.1|972307_973606_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP025232.1|QAZ08036.1|985815_986862_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVLDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP025232.1|QAZ08037.1|987112_988021_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP025232.1|QAZ08038.1|988030_989470_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP025232.1|QAZ08039.1|989456_990062_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP025232.1|QAZ08040.1|990079_990436_+|DUF3561-domain-containing-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP025232.1|QAZ08041.1|990626_990938_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP025232.1|QAZ08042.1|990956_991667_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLADHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP025232.1|QAZ08043.1|991666_992146_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP025232.1|QAZ08044.1|992142_993192_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALHWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP025232.1|QAZ08045.1|993172_993934_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVICALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP025232_2	2.31\|985752\|33\|CP025232\|PILER-CR	985752-985784	33	NC_004313	Salmonella phage ST64B, complete genome	31960-31992	1	0.97
CP025232_2	2.31\|985752\|33\|CP025232\|PILER-CR	985752-985784	33	KU927493	Salmonella phage 118970_sal3, complete genome	69572-69604	1	0.97
CP025232_2	2.31\|985752\|33\|CP025232\|PILER-CR	985752-985784	33	AY055382	Salmonella typhimurium phage ST64B complete sequence	31960-31992	1	0.97
CP025232_2	2.60\|985741\|32\|CP025232\|CRISPRCasFinder,CRT	985741-985772	32	NC_004313	Salmonella phage ST64B, complete genome	31961-31992	1	0.969
CP025232_2	2.60\|985741\|32\|CP025232\|CRISPRCasFinder,CRT	985741-985772	32	KU927493	Salmonella phage 118970_sal3, complete genome	69573-69604	1	0.969
CP025232_2	2.60\|985741\|32\|CP025232\|CRISPRCasFinder,CRT	985741-985772	32	AY055382	Salmonella typhimurium phage ST64B complete sequence	31961-31992	1	0.969
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112052-112083	5	0.844
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224971-225002	5	0.844
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90823	5	0.844
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NZ_CP044082	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence	90792-90822	5	0.839
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271430	5	0.839
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NZ_CP024424	Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence	112053-112083	5	0.839
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	224972-225002	5	0.839
CP025232_2	2.42\|984540\|32\|CP025232\|CRISPRCasFinder,CRT	984540-984571	32	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10362	5	0.844
CP025232_2	2.56\|985394\|32\|CP025232\|CRISPRCasFinder,CRT	985394-985425	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1493565-1493596	5	0.844
CP025232_2	2.56\|985394\|32\|CP025232\|CRISPRCasFinder,CRT	985394-985425	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	917379-917410	5	0.844
CP025232_1	1.17\|975715\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975715-975746	32	MK448383	Streptococcus satellite phage Javan248, complete genome	4976-5007	6	0.812
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33598	6	0.806
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	271400-271431	6	0.812
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654403-654433	6	0.806
CP025232_2	2.11\|984539\|33\|CP025232\|PILER-CR	984539-984571	33	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	10331-10363	6	0.818
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	30961-30992	6	0.812
CP025232_2	2.42\|984540\|32\|CP025232\|CRISPRCasFinder,CRT	984540-984571	32	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5482	6	0.812
CP025232_1	1.2\|974800\|32\|CP025232\|CRISPRCasFinder,CRT	974800-974831	32	NZ_CP024891	Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence	51303-51334	7	0.781
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	343727-343758	7	0.781
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	654402-654433	7	0.781
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	4747-4778	7	0.781
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	389262-389293	7	0.781
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	AP014010	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, * SEQUENCING IN PROGRESS *	33568-33599	7	0.781
CP025232_1	1.22\|975898\|31\|CP025232\|CRT	975898-975928	31	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052325	7	0.774
CP025232_2	2.5\|984173\|33\|CP025232\|PILER-CR	984173-984205	33	MH319741	Marine virus AG-345-E15 Ga0172270_11 genomic sequence	30961-30993	7	0.788
CP025232_2	2.9\|984417\|33\|CP025232\|PILER-CR	984417-984449	33	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	106854-106886	7	0.788
CP025232_2	2.11\|984539\|33\|CP025232\|PILER-CR	984539-984571	33	MK448230	Klebsiella phage ST16-OXA48phi5.2, complete genome	5451-5483	7	0.788
CP025232_2	2.21\|985149\|33\|CP025232\|PILER-CR	985149-985181	33	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	304163-304195	7	0.788
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	294630-294661	7	0.781
CP025232_2	2.40\|984418\|32\|CP025232\|CRISPRCasFinder,CRT	984418-984449	32	NC_010627	Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence	106855-106886	7	0.781
CP025232_2	2.52\|985150\|32\|CP025232\|CRISPRCasFinder,CRT	985150-985181	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	304164-304195	7	0.781
CP025232_2	2.52\|985150\|32\|CP025232\|CRISPRCasFinder,CRT	985150-985181	32	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	194506-194537	7	0.781
CP025232_1	1.8\|975166\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975166-975197	32	KR053200	Gordonia phage GTE6, complete genome	31264-31295	8	0.75
CP025232_1	1.12\|975410\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975410-975441	32	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	272606-272637	8	0.75
CP025232_1	1.20\|975897\|32\|CP025232\|CRISPRCasFinder	975897-975928	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	2052295-2052326	8	0.75
CP025232_2	2.4\|984112\|33\|CP025232\|PILER-CR	984112-984144	33	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1888410-1888442	8	0.758
CP025232_2	2.4\|984112\|33\|CP025232\|PILER-CR	984112-984144	33	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1888408-1888440	8	0.758
CP025232_2	2.5\|984173\|33\|CP025232\|PILER-CR	984173-984205	33	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	294630-294662	8	0.758
CP025232_2	2.21\|985149\|33\|CP025232\|PILER-CR	985149-985181	33	NZ_LT984809	Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence	194506-194538	8	0.758
CP025232_2	2.40\|984418\|32\|CP025232\|CRISPRCasFinder,CRT	984418-984449	32	NZ_CP031226	Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence	573671-573702	8	0.75
CP025232_2	2.52\|985150\|32\|CP025232\|CRISPRCasFinder,CRT	985150-985181	32	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756038-1756069	8	0.75
CP025232_2	2.52\|985150\|32\|CP025232\|CRISPRCasFinder,CRT	985150-985181	32	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879041	8	0.75
CP025232_1	1.14\|975532\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975532-975563	32	MN693011	Marine virus AFVG_117M58, complete genome	34901-34932	9	0.719
CP025232_1	1.17\|975715\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975715-975746	32	MK250029	Prevotella phage Lak-C1, complete genome	220147-220178	9	0.719
CP025232_1	1.17\|975715\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975715-975746	32	MK250016	Prevotella phage Lak-A1, complete genome	256365-256396	9	0.719
CP025232_1	1.17\|975715\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975715-975746	32	MK250019	Prevotella phage Lak-A2, complete genome	177499-177530	9	0.719
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72061	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3414-3444	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232723-232753	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129920	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109942-109972	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148698-148728	9	0.71
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3414-3444	9	0.71
CP025232_2	2.1\|983929\|33\|CP025232\|PILER-CR	983929-983961	33	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	616323-616355	9	0.727
CP025232_2	2.21\|985149\|33\|CP025232\|PILER-CR	985149-985181	33	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	1756037-1756069	9	0.727
CP025232_2	2.21\|985149\|33\|CP025232\|PILER-CR	985149-985181	33	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1879010-1879042	9	0.727
CP025232_2	2.25\|985393\|33\|CP025232\|PILER-CR	985393-985425	33	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	144846-144878	9	0.727
CP025232_2	2.32\|983930\|32\|CP025232\|CRISPRCasFinder,CRT	983930-983961	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	616323-616354	9	0.719
CP025232_2	2.32\|983930\|32\|CP025232\|CRISPRCasFinder,CRT	983930-983961	32	NC_024369	Vibrio phage X29, complete genome	16391-16422	9	0.719
CP025232_2	2.32\|983930\|32\|CP025232\|CRISPRCasFinder,CRT	983930-983961	32	MK575466	Vibrio phage Rostov 7, complete genome	37606-37637	9	0.719
CP025232_2	2.32\|983930\|32\|CP025232\|CRISPRCasFinder,CRT	983930-983961	32	KJ545483	Vibrio phage phi 2, complete genome	16391-16422	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693555	Marine virus AFVG_25M96, complete genome	8842-8873	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693550	Marine virus AFVG_25M93, complete genome	10730-10761	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693245	Marine virus AFVG_25M69, complete genome	11115-11146	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693208	Marine virus AFVG_25M383, complete genome	25882-25913	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693436	Marine virus AFVG_25M57, complete genome	28024-28055	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693515	Marine virus AFVG_25M70, complete genome	10467-10498	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693320	Marine virus AFVG_25M58, complete genome	28018-28049	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693286	Marine virus AFVG_25M92, complete genome	9636-9667	9	0.719
CP025232_2	2.36\|984174\|32\|CP025232\|CRISPRCasFinder,CRT	984174-984205	32	MN693549	Marine virus AFVG_25M89, complete genome	11533-11564	9	0.719
CP025232_2	2.44\|984662\|32\|CP025232\|CRISPRCasFinder,CRT	984662-984693	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	213856-213887	9	0.719
CP025232_2	2.50\|985028\|32\|CP025232\|CRISPRCasFinder,CRT	985028-985059	32	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	90958-90989	9	0.719
CP025232_2	2.56\|985394\|32\|CP025232\|CRISPRCasFinder,CRT	985394-985425	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	144847-144878	9	0.719
CP025232_2	2.57\|985558\|32\|CP025232\|CRISPRCasFinder,CRT	985558-985589	32	MK765565	Tortoise microvirus 15 isolate 15_SP_71, complete genome	3158-3189	9	0.719
CP025232_2	2.57\|985558\|32\|CP025232\|CRISPRCasFinder,CRT	985558-985589	32	MK765613	Tortoise microvirus 61 isolate 61_SP_107, complete genome	3173-3204	9	0.719
CP025232_2	2.60\|985741\|32\|CP025232\|CRISPRCasFinder,CRT	985741-985772	32	NZ_CP015221	Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence	111308-111339	9	0.719
CP025232_1	1.6\|975044\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975044-975075	32	MG945729	UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome	1763-1794	10	0.688
CP025232_1	1.13\|975471\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975471-975502	32	MK449008	Streptococcus phage Javan84, complete genome	18935-18966	10	0.688
CP025232_1	1.13\|975471\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975471-975502	32	MK448832	Streptococcus phage Javan85, complete genome	18935-18966	10	0.688
CP025232_1	1.18\|975776\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975776-975807	32	NZ_CP024657	Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence	129540-129571	10	0.688
CP025232_1	1.18\|975776\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975776-975807	32	NZ_CP015354	Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence	111984-112015	10	0.688
CP025232_1	1.18\|975776\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975776-975807	32	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	46996-47027	10	0.688
CP025232_1	1.18\|975776\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975776-975807	32	MH078572	Staphylococcus phage phiSA_BS1, complete genome	1850-1881	10	0.688
CP025232_1	1.19\|975837\|31\|CP025232\|CRISPRCasFinder	975837-975867	31	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78356-78386	10	0.677
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	78355-78386	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	72031-72062	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	3413-3444	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	232722-232753	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	129890-129921	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	109941-109972	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	148697-148728	10	0.688
CP025232_1	1.21\|975837\|32\|CP025232\|CRT,PILER-CR	975837-975868	32	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	3413-3444	10	0.688
CP025232_2	2.1\|983929\|33\|CP025232\|PILER-CR	983929-983961	33	NC_024369	Vibrio phage X29, complete genome	16391-16423	10	0.697
CP025232_2	2.1\|983929\|33\|CP025232\|PILER-CR	983929-983961	33	MK575466	Vibrio phage Rostov 7, complete genome	37606-37638	10	0.697
CP025232_2	2.1\|983929\|33\|CP025232\|PILER-CR	983929-983961	33	KJ545483	Vibrio phage phi 2, complete genome	16391-16423	10	0.697
CP025232_2	2.35\|984113\|32\|CP025232\|CRISPRCasFinder,CRT	984113-984144	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1888410-1888441	10	0.688
CP025232_2	2.35\|984113\|32\|CP025232\|CRISPRCasFinder,CRT	984113-984144	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1888408-1888439	10	0.688
CP025232_2	2.43\|984601\|32\|CP025232\|CRISPRCasFinder,CRT	984601-984632	32	MK047641	Phage NV21, complete genome	23610-23641	10	0.688
CP025232_2	2.45\|984723\|32\|CP025232\|CRISPRCasFinder,CRT	984723-984754	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	191710-191741	10	0.688
CP025232_2	2.45\|984723\|32\|CP025232\|CRISPRCasFinder,CRT	984723-984754	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	237223-237254	10	0.688
CP025232_2	2.52\|985150\|32\|CP025232\|CRISPRCasFinder,CRT	985150-985181	32	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	91874-91905	10	0.688
CP025232_1	1.9\|975227\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975227-975258	32	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	4151-4182	11	0.656
CP025232_1	1.9\|975227\|32\|CP025232\|CRISPRCasFinder,CRT,PILER-CR	975227-975258	32	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	777802-777833	11	0.656

1. spacer 2.31|985752|33|CP025232|PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.97

gtaagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
gtaagttacgccagtgcaggcgtgttgctcatc	Protospacer
*****************.***************

2. spacer 2.31|985752|33|CP025232|PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.97

gtaagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
gtaagttacgccagtgcaggcgtgttgctcatc	Protospacer
*****************.***************

3. spacer 2.31|985752|33|CP025232|PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.97

gtaagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
gtaagttacgccagtgcaggcgtgttgctcatc	Protospacer
*****************.***************

4. spacer 2.60|985741|32|CP025232|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

5. spacer 2.60|985741|32|CP025232|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

6. spacer 2.60|985741|32|CP025232|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 1, identity: 0.969

taagttacgccagtgcgggcgtgttgctcatc	CRISPR spacer
taagttacgccagtgcaggcgtgttgctcatc	Protospacer
****************.***************

7. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

8. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

9. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gagatcgcgctggcggcctcatccg-tgccgca	Protospacer
*.**************.* ****** *****.

10. spacer 1.22|975898|31|CP025232|CRT matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

11. spacer 1.22|975898|31|CP025232|CRT matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

12. spacer 1.22|975898|31|CP025232|CRT matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

13. spacer 1.22|975898|31|CP025232|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.839

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
agatcgcgctggcggcctcatccg-tgccgca	Protospacer
.**************.* ****** *****.

14. spacer 2.42|984540|32|CP025232|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 5, identity: 0.844

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
ccaggcgatcgcatctgggtgcgggaggcctt	Protospacer
** ***********.***********..* **

15. spacer 2.56|985394|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

--ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
tcccggccg--ccgatggcgatcctgccggtgct	Protospacer
  **** **  ******* ********** ****

16. spacer 2.56|985394|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 5, identity: 0.844

--ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
tcccggccg--ccgatggcgatcctgccggtgct	Protospacer
  **** **  ******* ********** ****

17. spacer 1.17|975715|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK448383 (Streptococcus satellite phage Javan248, complete genome) position: , mismatch: 6, identity: 0.812

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
tgaaaatcttctttcatagaaacgtatgtatt	Protospacer
*.**************** ** **** * .**

18. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.806

agcacaatcattattagatgaactt--tcatca	CRISPR spacer
aacacaagaattattagatgaacttggtgat--	Protospacer
*.*****  ****************  * **

19. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cagatcgcgctggcggcctcatccg-tgccgca	Protospacer
 .**************.* ****** *****.

20. spacer 1.22|975898|31|CP025232|CRT matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 6, identity: 0.806

ggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
ggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
** **************** *** *.* **.

21. spacer 2.11|984539|33|CP025232|PILER-CR matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 6, identity: 0.818

gcctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
accaggcgatcgcatctgggtgcgggaggcctt	Protospacer
.** ***********.***********..* **

22. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 6, identity: 0.812

ggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
ataataaaaaagtatttgagtcaactgatata-	Protospacer
. ******** * *************  ****

23. spacer 2.42|984540|32|CP025232|CRISPRCasFinder,CRT matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 6, identity: 0.812

cctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
gtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
 ..***********.******** *******

24. spacer 1.2|974800|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP024891 (Rhodococcus ruber strain YYL plasmid pYYL1.2, complete sequence) position: , mismatch: 7, identity: 0.781

cagtgcggcagcgcgcaatcgagacacgccat	CRISPR spacer
cggtgcgacagcgagcaatcgagacgggctct	Protospacer
*.*****.***** ***********. **. *

25. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
gggatcgcggtggcggtcgc-ttcgaggaagtt	Protospacer
********* ********** *.**  *  **

26. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

gggatcgcgctggcggtcgcatccgttgccgt-	CRISPR spacer
cggctcgcgctggcggtcgcttcc-tcggcgcg	Protospacer
 ** **************** *** *.* **.

27. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

28. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 7, identity: 0.781

agcac-aatcattattagatgaactttcatcaa	CRISPR spacer
-ttacgaaagatttttagatgaacttgcatcaa	Protospacer
  .** **  *** ************ ******

29. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to AP014010 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C97-MedDCM-OCT-S27-C11, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

agcacaatcattattagatgaactt--tcatcaa	CRISPR spacer
aacacaagaattattagatgaacttggtgatg--	Protospacer
*.*****  ****************  * **

30. spacer 1.22|975898|31|CP025232|CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.774

ggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
ggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
** ******* ************ . ***

31. spacer 2.5|984173|33|CP025232|PILER-CR matches to MH319741 (Marine virus AG-345-E15 Ga0172270_11 genomic sequence) position: , mismatch: 7, identity: 0.788

gggaataaaaatgaatttgagtcaact-ctataa	CRISPR spacer
tataataaaaaagtatttgagtcaactgatata-	Protospacer
 . ******** * *************  ****

32. spacer 2.9|984417|33|CP025232|PILER-CR matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 7, identity: 0.788

gaaacccgcgcccgtgagctcgatatgctcggc	CRISPR spacer
gccatccgcgcccgtgagcacgatgtgctggac	Protospacer
*  *.************** ****.**** *.*

33. spacer 2.11|984539|33|CP025232|PILER-CR matches to MK448230 (Klebsiella phage ST16-OXA48phi5.2, complete genome) position: , mismatch: 7, identity: 0.788

gcctggcgatcgcatttgggtgcgggaaacatt	CRISPR spacer
cgtcggcgatcgcatctgggtgcgtgaaacatg	Protospacer
  ..***********.******** *******

34. spacer 2.21|985149|33|CP025232|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.788

ggcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
ggcgatgtatgccgcgacgattgaatccacgct	Protospacer
*********************.**.  *. .**

35. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
tgtataaaaatgaatttgaggtaactccctac	Protospacer
 * ***************** .*****. **

36. spacer 2.40|984418|32|CP025232|CRISPRCasFinder,CRT matches to NC_010627 (Paraburkholderia phymatum STM815 plasmid pBPHY02, complete sequence) position: , mismatch: 7, identity: 0.781

aaacccgcgcccgtgagctcgatatgctcggc	CRISPR spacer
ccatccgcgcccgtgagcacgatgtgctggac	Protospacer
  *.************** ****.**** *.*

37. spacer 2.52|985150|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gcgatgtatgccgcgacgattgaatccacgct	Protospacer
********************.**.  *. .**

38. spacer 2.52|985150|32|CP025232|CRISPRCasFinder,CRT matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.781

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
accattcatgccgcgacgaacaagagcgaaca	Protospacer
.* ** .************ *.*********

39. spacer 1.8|975166|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to KR053200 (Gordonia phage GTE6, complete genome) position: , mismatch: 8, identity: 0.75

tgaagaacggccagcccgtcgaggtatcaatc	CRISPR spacer
tgaagatcgaccagcccgtcgagccggtgatc	Protospacer
****** **.************* .. ..***

40. spacer 1.12|975410|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 8, identity: 0.75

caataggacagccattcgagcgcccagagttt	CRISPR spacer
tcacaggacagctattcgagcgcccagtccgt	Protospacer
. *.********.**************  . *

41. spacer 1.20|975897|32|CP025232|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

gggatcgcgctggcggtcgcatccgttgccgt	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcccg	Protospacer
 ** ******* ************ . ***

42. spacer 2.4|984112|33|CP025232|PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgc-ggggctggtattcgatacagacccggcta	CRISPR spacer
-cgctcgggctggtattcgattccgacccgcgcc	Protospacer
 ***  *************** * ******  .

43. spacer 2.4|984112|33|CP025232|PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

gcgc-ggggctggtattcgatacagacccggcta	CRISPR spacer
-cgctcgggctggtattcgattccgacccgcgcc	Protospacer
 ***  *************** * ******  .

44. spacer 2.5|984173|33|CP025232|PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.758

gggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttgtataaaaatgaatttgaggtaactccctac	Protospacer
  * ***************** .*****. **

45. spacer 2.21|985149|33|CP025232|PILER-CR matches to NZ_LT984809 (Cupriavidus taiwanensis isolate Cupriavidus taiwanensis STM 8555 plasmid I, complete sequence) position: , mismatch: 8, identity: 0.758

ggcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
caccattcatgccgcgacgaacaagagcgaaca	Protospacer
 .* ** .************ *.*********

46. spacer 2.40|984418|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP031226 (Pseudomonas amygdali pv. lachrymans str. M301315 plasmid pMPPla107, complete sequence) position: , mismatch: 8, identity: 0.75

aaacccgcgcccgtgagctcgatatgctcggc	CRISPR spacer
aaaccagcgcccgcgagctcgatcctttcctc	Protospacer
***** *******.********* . .**  *

47. spacer 2.52|985150|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

48. spacer 2.52|985150|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
gaaccttatgccacgacgatcgagaacgaaca	Protospacer
* . . ******.************.*****

49. spacer 1.14|975532|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MN693011 (Marine virus AFVG_117M58, complete genome) position: , mismatch: 9, identity: 0.719

aactaacgtctatagctaaatgtagagaaaac	CRISPR spacer
taaaaggttctatagctaaaagtggagaaaat	Protospacer
 *  *.  ************ **.*******.

50. spacer 1.17|975715|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

51. spacer 1.17|975715|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

52. spacer 1.17|975715|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 9, identity: 0.719

taaaaatcttctttcatataaccgtaagggtt	CRISPR spacer
gtattatcttctttcacataacggtaagcaat	Protospacer
  *  ***********.***** ***** . *

53. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

54. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

55. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

56. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

57. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

58. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

59. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.71

agcacaatcattattagatgaactttcatca	CRISPR spacer
ccaacatgcattattagatgaacttttcttt	Protospacer
   ***  ******************. *.

60. spacer 2.1|983929|33|CP025232|PILER-CR matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.727

gtgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
gccattggtcggattgtttgcgtgcggggccgg	Protospacer
*. . .* .****************** * ***

61. spacer 2.21|985149|33|CP025232|PILER-CR matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tgaaccttatgccacgacgatcgagaacgaaca	Protospacer
 * . . ******.************.*****

62. spacer 2.21|985149|33|CP025232|PILER-CR matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 9, identity: 0.727

ggcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tgaaccttatgccacgacgatcgagaacgaaca	Protospacer
 * . . ******.************.*****

63. spacer 2.25|985393|33|CP025232|PILER-CR matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

gccggacgacccgatggggatcctgccgttgct	CRISPR spacer
gccggacgccccggtggggatcctcgggatcgg	Protospacer
******** ****.**********   * *

64. spacer 2.32|983930|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
ccattggtcggattgtttgcgtgcggggccgg	Protospacer
. . .* .****************** * ***

65. spacer 2.32|983930|32|CP025232|CRISPRCasFinder,CRT matches to NC_024369 (Vibrio phage X29, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

66. spacer 2.32|983930|32|CP025232|CRISPRCasFinder,CRT matches to MK575466 (Vibrio phage Rostov 7, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

67. spacer 2.32|983930|32|CP025232|CRISPRCasFinder,CRT matches to KJ545483 (Vibrio phage phi 2, complete genome) position: , mismatch: 9, identity: 0.719

tgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
cccaagcccggcttttttgcgtgcggcgaatg	Protospacer
.  . ****** ** **************  *

68. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

69. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693550 (Marine virus AFVG_25M93, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

70. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693245 (Marine virus AFVG_25M69, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

71. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693208 (Marine virus AFVG_25M383, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

72. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693436 (Marine virus AFVG_25M57, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

73. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693515 (Marine virus AFVG_25M70, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

74. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693320 (Marine virus AFVG_25M58, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

75. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693286 (Marine virus AFVG_25M92, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttctaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

76. spacer 2.36|984174|32|CP025232|CRISPRCasFinder,CRT matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 9, identity: 0.719

ggaataaaaatgaatttgagtcaactctataa	CRISPR spacer
ttttaataaatgaaattgattcaactctatga	Protospacer
     * ******* **** **********.*

77. spacer 2.44|984662|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gactcggcctgttttttgattttgacaatcag	CRISPR spacer
ccgtcggcctgttctttcattttgacttacac	Protospacer
   **********.*** ********   **

78. spacer 2.50|985028|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ccaataaccgaaatatccacggtggaaatttc	CRISPR spacer
ctttttacaggaatatccacggtggaaatagt	Protospacer
*.  * ** *.******************  .

79. spacer 2.56|985394|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ccggacgacccgatggggatcctgccgttgct	CRISPR spacer
ccggacgccccggtggggatcctcgggatcgg	Protospacer
******* ****.**********   * *

80. spacer 2.57|985558|32|CP025232|CRISPRCasFinder,CRT matches to MK765565 (Tortoise microvirus 15 isolate 15_SP_71, complete genome) position: , mismatch: 9, identity: 0.719

ggggcttgttaatatttctctcactgactacg	CRISPR spacer
agaacgtgttaatatttcactcgctgacttta	Protospacer
.*..* ************ ***.****** ..

81. spacer 2.57|985558|32|CP025232|CRISPRCasFinder,CRT matches to MK765613 (Tortoise microvirus 61 isolate 61_SP_107, complete genome) position: , mismatch: 9, identity: 0.719

ggggcttgttaatatttctctcactgactacg	CRISPR spacer
agaacgtgttaatatttcactcgctgacttta	Protospacer
.*..* ************ ***.****** ..

82. spacer 2.60|985741|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP015221 (Rhodococcus sp. PBTS 2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taagttac---gccagtgcgggcgtgttgctcatc	CRISPR spacer
---actgcgcggcgagtgcgggcgcgttgctcatg	Protospacer
   ..*.*   ** **********.*********

83. spacer 1.6|975044|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MG945729 (UNVERIFIED: Microviridae sp. isolate 2292-1801, complete genome) position: , mismatch: 10, identity: 0.688

aaaataacaacattatcagtgtgaaaagtctc	CRISPR spacer
gcaataacaaccttatcagtgtcaactttaat	Protospacer
. ********* ********** **   *  .

84. spacer 1.13|975471|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

85. spacer 1.13|975471|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 10, identity: 0.688

gtcagtatgcactgcttgataaagtcaggcca	CRISPR spacer
cacagtatggacagcttgataaagttacctgg	Protospacer
  ******* ** ************.*  . .

86. spacer 1.18|975776|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

87. spacer 1.18|975776|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015354 (Bacillus thuringiensis strain MYBT18246 plasmid p120416, complete sequence) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tgcatttctatgtcgaaaaataaaaacggcag	Protospacer
.*   .******** **********.***.

88. spacer 1.18|975776|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

89. spacer 1.18|975776|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.688

cggtgctctatgtctaaaaataaaagcggttc	CRISPR spacer
tagatacctatgtctaaaaatgaaaggggtat	Protospacer
..*   .**************.**** *** .

90. spacer 1.19|975837|31|CP025232|CRISPRCasFinder matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.677

agcacaatcattattagatgaactttcatca	CRISPR spacer
tcttatggcattattagatgaattttcaaca	Protospacer
  .   . **************.***** **

91. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
tcttatggcattattagatgaattttcaacaa	Protospacer
  .   . **************.***** ***

92. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

93. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

94. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

95. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

96. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

97. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

98. spacer 1.21|975837|32|CP025232|CRT,PILER-CR matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

agcacaatcattattagatgaactttcatcaa	CRISPR spacer
ccaacatgcattattagatgaacttttctttt	Protospacer
   ***  ******************. *.

99. spacer 2.1|983929|33|CP025232|PILER-CR matches to NC_024369 (Vibrio phage X29, complete genome) position: , mismatch: 10, identity: 0.697

gtgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
tcccaagcccggcttttttgcgtgcggcgaatg	Protospacer
 .  . ****** ** **************  *

100. spacer 2.1|983929|33|CP025232|PILER-CR matches to MK575466 (Vibrio phage Rostov 7, complete genome) position: , mismatch: 10, identity: 0.697

gtgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
tcccaagcccggcttttttgcgtgcggcgaatg	Protospacer
 .  . ****** ** **************  *

101. spacer 2.1|983929|33|CP025232|PILER-CR matches to KJ545483 (Vibrio phage phi 2, complete genome) position: , mismatch: 10, identity: 0.697

gtgggcgcccggattgtttgcgtgcggcgacgg	CRISPR spacer
tcccaagcccggcttttttgcgtgcggcgaatg	Protospacer
 .  . ****** ** **************  *

102. spacer 2.35|984113|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

103. spacer 2.35|984113|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcggggctggtattcgatacagacccggcta	CRISPR spacer
gctcgggctggtattcgattccgacccgcgcc	Protospacer
  . *************** * ******  .

104. spacer 2.43|984601|32|CP025232|CRISPRCasFinder,CRT matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 10, identity: 0.688

ccgaatatggtgataatgttgcaccttcgctc	CRISPR spacer
ctacttatggtgataatgtttcaccgtcttgg	Protospacer
*..  *************** **** ** .

105. spacer 2.45|984723|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

106. spacer 2.45|984723|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 10, identity: 0.688

ccaataaccgacgagggcaaacgccgtgcgcg	CRISPR spacer
atcagcgccgacgagggcacccgccgtgcggt	Protospacer
 . *  .************  *********

107. spacer 2.52|985150|32|CP025232|CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 10, identity: 0.688

gcgatgtatgccgcgacgatcgagagcgaact	CRISPR spacer
tttgtccatgccgcgacgatcgataccgaaaa	Protospacer
 . .* .**************** * ****

108. spacer 1.9|975227|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 11, identity: 0.656

cgttgtcgttgctggacagaactccggggacg	CRISPR spacer
tcaggtcgaggctggacagaactccggatctc	Protospacer
.   ****  *****************.  .

109. spacer 1.9|975227|32|CP025232|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 11, identity: 0.656

cgttgtcgttgctggacagaactccggggacg	CRISPR spacer
tcaggtcgaggctggacagaactccggatctc	Protospacer
.   ****  *****************.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1152089 : 1214948

Salmonella_phage(95.56%)

integrase,tail,tRNA,head,plate,capsid,portal

attL 1151922:1151970|attR 1185956:1186004

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1151922:1151970	attL	NA	NA	NA	NA
QAZ08205.1\|1152089_1152752_-	hypothetical protein	E5G6K9	Salmonella_phage	3.4e-124	100.0
QAZ08206.1\|1153304_1154321_-\|integrase	integrase	E5G6L0	Salmonella_phage	5.0e-199	100.0
QAZ08207.1\|1154323_1154956_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	6.3e-59	51.4
QAZ08208.1\|1155077_1155320_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
QAZ08209.1\|1155353_1155863_+	hypothetical protein	E5G6L3	Salmonella_phage	1.5e-87	100.0
QAZ11610.1\|1155870_1156071_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	2.4e-33	100.0
QAZ08210.1\|1156034_1156376_+	hypothetical protein	E5G6L5	Salmonella_phage	1.2e-56	100.0
QAZ08211.1\|1156443_1156677_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	1.7e-33	100.0
QAZ08212.1\|1156676_1156904_+	hypothetical protein	E5G6L7	Salmonella_phage	2.7e-36	100.0
QAZ08213.1\|1156900_1157758_+	DNA adenine methylase	E5G6L8	Salmonella_phage	6.8e-165	100.0
QAZ08214.1\|1157754_1160169_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	100.0
QAZ08215.1\|1160321_1160510_+	hypothetical protein	E5G6M0	Salmonella_phage	1.4e-27	100.0
QAZ08216.1\|1160448_1160754_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
QAZ08217.1\|1160813_1161545_+	hypothetical protein	NA	NA	NA	NA
QAZ08218.1\|1161858_1163523_+	abortive phage infection protein	E5G6M2	Salmonella_phage	0.0e+00	100.0
QAZ08219.1\|1163626_1164667_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	5.5e-201	100.0
QAZ08220.1\|1164666_1166433_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	97.1
QAZ08221.1\|1166575_1167409_+\|capsid	capsid protein	E5G6M5	Salmonella_phage	3.1e-130	100.0
QAZ08222.1\|1167425_1168487_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.1e-195	100.0
QAZ08223.1\|1168490_1169141_+	hypothetical protein	E5G6M7	Salmonella_phage	4.9e-115	100.0
QAZ08224.1\|1169234_1169699_+\|head	head completion/stabilization protein	E5G6M8	Salmonella_phage	9.9e-86	100.0
QAZ08225.1\|1169698_1169902_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	3.8e-34	100.0
QAZ08226.1\|1169905_1170121_+	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
QAZ08227.1\|1170101_1170617_+	lysozyme	E5G6N1	Salmonella_phage	5.3e-96	100.0
QAZ08228.1\|1170613_1171042_+	hypothetical protein	E5G6N2	Salmonella_phage	2.3e-68	100.0
QAZ08229.1\|1170971_1171175_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	8.3e-29	92.5
QAZ08230.1\|1171137_1171569_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.7e-76	100.0
QAZ08231.1\|1171561_1172008_+	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	2.3e-71	99.3
QAZ08232.1\|1172009_1172861_-	hypothetical protein	E5G6N5	Salmonella_phage	2.8e-163	100.0
QAZ08233.1\|1172938_1173517_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-108	100.0
QAZ08234.1\|1173513_1173873_+\|plate	baseplate assembly protein	E5G6N7	Salmonella_phage	1.1e-60	100.0
QAZ08235.1\|1173859_1174768_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	5.4e-160	100.0
QAZ08236.1\|1174760_1175366_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	1.3e-117	100.0
QAZ08237.1\|1175362_1177216_+\|tail	phage tail protein	E5G6P0	Salmonella_phage	0.0e+00	100.0
QAZ08238.1\|1177215_1177791_+\|tail	tail fiber assembly protein	E5G6P1	Salmonella_phage	4.3e-107	100.0
QAZ08239.1\|1178660_1178885_+	Hin recombinase	E5G6P5	Salmonella_phage	1.5e-34	100.0
QAZ08240.1\|1178987_1180160_+\|tail	phage tail protein	E5G6P7	Salmonella_phage	3.4e-223	99.7
QAZ08241.1\|1180169_1180685_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	9.3e-93	100.0
QAZ08242.1\|1180739_1181042_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.5e-45	100.0
QAZ08243.1\|1181056_1181176_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.8e-15	100.0
QAZ08244.1\|1181168_1183976_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	100.0
QAZ08245.1\|1183972_1184458_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.7e-77	100.0
QAZ08246.1\|1184454_1185555_+	late control protein D	E5G6Q3	Salmonella_phage	2.6e-201	100.0
QAZ11611.1\|1185623_1185842_+	levansucrase regulator	E5G6Q4	Salmonella_phage	2.1e-38	100.0
QAZ11612.1\|1186393_1187557_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1185956:1186004	attR	NA	NA	NA	NA
QAZ08247.1\|1187564_1189745_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	9.9e-19	34.0
QAZ08248.1\|1189741_1191151_-	type I secretion protein TolC	NA	NA	NA	NA
QAZ08249.1\|1191215_1202690_-	Ig-like domain repeat protein	NA	NA	NA	NA
QAZ11613.1\|1203303_1203786_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
QAZ08250.1\|1203935_1204412_+	ubiquinone-binding protein	NA	NA	NA	NA
QAZ08251.1\|1204401_1204692_+	RnfH family protein	NA	NA	NA	NA
QAZ08252.1\|1204857_1205196_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
QAZ08253.1\|1205344_1207006_-	DNA repair protein RecN	NA	NA	NA	NA
QAZ08254.1\|1207091_1207970_-	NAD(+) kinase	NA	NA	NA	NA
QAZ11614.1\|1207901_1208096_+	molecular chaperone GrpE	NA	NA	NA	NA
QAZ08255.1\|1208092_1208683_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
QAZ08256.1\|1208717_1209323_-	cytoplasmic protein	NA	NA	NA	NA
QAZ08257.1\|1209443_1210685_-	magnesium/cobalt efflux protein	NA	NA	NA	NA
QAZ08258.1\|1210749_1211541_-	inner membrane protein YpjD	NA	NA	NA	NA
QAZ08259.1\|1211486_1211783_-	hypothetical protein	NA	NA	NA	NA
QAZ08260.1\|1211706_1213068_+	signal recognition particle protein	NA	NA	NA	NA
QAZ08261.1\|1213320_1213569_+	30S ribosomal protein S16	NA	NA	NA	NA
QAZ11615.1\|1213587_1214136_+	ribosome maturation factor RimM	NA	NA	NA	NA
QAZ08262.1\|1214180_1214948_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_2

1241954 : 1318688

Salmonella_phage(37.93%)

integrase,holin,tRNA,tail,head,capsid,terminase,protease,transposase,lysis,portal

attL 1234035:1234051|attR 1324535:1324551

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1234035:1234051	attL	NA	NA	NA	NA
QAZ08284.1\|1241954_1242992_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
QAZ08285.1\|1243107_1243797_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
QAZ08286.1\|1244115_1244499_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
QAZ08287.1\|1244560_1245148_-	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
QAZ11617.1\|1245250_1246150_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAZ08288.1\|1246167_1247502_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
QAZ08289.1\|1247631_1248369_+\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
QAZ08290.1\|1248353_1249976_-	L-aspartate oxidase	NA	NA	NA	NA
QAZ08291.1\|1250060_1250240_+	hypothetical protein	NA	NA	NA	NA
QAZ08292.1\|1250400_1250976_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
QAZ08293.1\|1251007_1251658_+	anti-sigma-E factor RseA	NA	NA	NA	NA
QAZ08294.1\|1251657_1252614_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
QAZ08295.1\|1252610_1253090_+	SoxR reducing system protein RseC	NA	NA	NA	NA
QAZ08296.1\|1253119_1253236_+	transcriptional regulator	NA	NA	NA	NA
QAZ08297.1\|1253587_1254817_+\|integrase	integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
QAZ08298.1\|1254794_1255079_-	excisionase	H6WRW8	Salmonella_phage	3.1e-42	86.2
QAZ08299.1\|1255119_1255359_-	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
QAZ08300.1\|1255401_1256559_-	enterohemolysin	S4TTE8	Salmonella_phage	3.9e-216	99.5
QAZ08301.1\|1256521_1259449_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.2
QAZ08302.1\|1259575_1259926_-	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
QAZ08303.1\|1259947_1260106_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
QAZ08304.1\|1260562_1261225_-	hypothetical protein	NA	NA	NA	NA
QAZ08305.1\|1261224_1261611_-	hypothetical protein	NA	NA	NA	NA
QAZ08306.1\|1261603_1262443_-	chromosome partitioning protein ParA	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
QAZ08307.1\|1262501_1262897_-	transcriptional regulator	K7PM35	Enterobacteria_phage	1.9e-37	61.4
QAZ08308.1\|1262996_1263239_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
QAZ08309.1\|1263198_1263573_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
QAZ08310.1\|1263664_1264549_+	replication protein	K7PGT1	Enterobacteria_phage	1.3e-46	47.2
QAZ08311.1\|1264545_1265241_+	phage replication protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
QAZ08312.1\|1265254_1265953_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
QAZ08313.1\|1266060_1266693_+	hypothetical protein	NA	NA	NA	NA
QAZ08314.1\|1266935_1267169_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
QAZ08315.1\|1267285_1267534_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
QAZ08316.1\|1267568_1268171_+	hypothetical protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
QAZ08317.1\|1268170_1268377_+	hypothetical protein	S4TNP0	Salmonella_phage	1.7e-34	97.1
QAZ08318.1\|1268379_1268991_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
QAZ08319.1\|1268987_1269128_+	hypothetical protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
QAZ08320.1\|1269124_1269802_+	antiterminator	I6PDF8	Cronobacter_phage	7.7e-63	54.0
QAZ08321.1\|1269798_1269984_+	hypothetical protein	NA	NA	NA	NA
QAZ08322.1\|1270074_1270638_+	hypothetical protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
QAZ08323.1\|1271144_1271333_+	hypothetical protein	NA	NA	NA	NA
QAZ08324.1\|1271547_1272234_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
QAZ11618.1\|1272509_1272839_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
QAZ08325.1\|1272822_1273275_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
QAZ11619.1\|1273292_1273745_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
QAZ08326.1\|1273980_1274382_-	inhibitor of g-type lysozyme	NA	NA	NA	NA
QAZ08327.1\|1274416_1274611_+	hypothetical protein	NA	NA	NA	NA
QAZ08328.1\|1274668_1275214_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
QAZ08329.1\|1275185_1277117_+\|terminase	terminase	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
QAZ08330.1\|1277100_1277304_+\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
QAZ08331.1\|1277300_1278881_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
QAZ08332.1\|1278870_1280367_+	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
QAZ08333.1\|1280379_1280727_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
QAZ08334.1\|1280781_1281810_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
QAZ08335.1\|1281867_1282227_+	DNA packaging protein	NA	NA	NA	NA
QAZ08336.1\|1282237_1282621_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
QAZ08337.1\|1282648_1283227_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
QAZ08338.1\|1283275_1284526_-\|transposase	transposase	Q9G0F2	Phage_Gifsy-1	7.8e-218	100.0
QAZ08339.1\|1284514_1284916_+\|tail	phage tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
QAZ08340.1\|1284923_1285670_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
QAZ08341.1\|1285720_1286116_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
QAZ08342.1\|1286112_1286451_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
QAZ08343.1\|1286422_1289518_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.7e-274	62.3
QAZ08344.1\|1289520_1289850_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
QAZ08345.1\|1289859_1290558_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
QAZ08346.1\|1290564_1291302_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
QAZ08347.1\|1291199_1291847_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
QAZ08348.1\|1291908_1295271_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.7
QAZ08349.1\|1295309_1295552_+	hypothetical protein	NA	NA	NA	NA
QAZ08350.1\|1295605_1297978_+\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	1.1e-90	65.6
QAZ08351.1\|1297974_1298799_+\|tail	phage tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
QAZ08352.1\|1298788_1299367_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
QAZ08353.1\|1299463_1299691_-	phage virulence factor	NA	NA	NA	NA
QAZ08354.1\|1299797_1300010_+	hypothetical protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
QAZ11620.1\|1300072_1300138_+	hypothetical protein	NA	NA	NA	NA
QAZ08355.1\|1300802_1301348_-\|transposase	transposase	NA	NA	NA	NA
QAZ08356.1\|1301594_1301732_-	hypothetical protein	NA	NA	NA	NA
QAZ08357.1\|1302210_1303704_-	type III secretion system protein	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
QAZ08358.1\|1304108_1305908_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
QAZ08359.1\|1305924_1306899_+	S26 family signal peptidase	NA	NA	NA	NA
QAZ08360.1\|1307172_1307853_+	ribonuclease 3	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
QAZ08361.1\|1307849_1308755_+	GTPase Era	NA	NA	NA	NA
QAZ08362.1\|1308766_1309495_+	DNA repair protein RecO	NA	NA	NA	NA
QAZ08363.1\|1309506_1310238_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
QAZ08364.1\|1310237_1310618_+	holo-ACP synthase	NA	NA	NA	NA
QAZ08365.1\|1310729_1310990_-	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	4.9e-18	53.5
QAZ08366.1\|1311027_1311954_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
QAZ08367.1\|1312069_1313266_+	MFS transporter	NA	NA	NA	NA
QAZ08368.1\|1313287_1314205_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
QAZ08369.1\|1314243_1315092_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
QAZ08370.1\|1315207_1316101_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
QAZ08371.1\|1316111_1317473_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
QAZ08372.1\|1317476_1318112_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
QAZ08373.1\|1318136_1318688_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
1324535:1324551	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1763131 : 1772302

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ08769.1\|1763131_1764079_+	ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.8e-10	27.8
QAZ08770.1\|1764062_1764794_+	ABC transporter permease	NA	NA	NA	NA
QAZ08771.1\|1764774_1764882_-	hypothetical protein	NA	NA	NA	NA
QAZ08772.1\|1764941_1765673_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
QAZ08773.1\|1765895_1767581_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
QAZ08774.1\|1767577_1768297_+	DNA-binding response regulator	NA	NA	NA	NA
QAZ08775.1\|1768343_1768811_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
QAZ08776.1\|1768867_1769398_-	lipoprotein	NA	NA	NA	NA
QAZ08777.1\|1769569_1770028_-	lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
QAZ08778.1\|1770268_1772302_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1840392 : 1850899

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ08833.1\|1840392_1841796_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
QAZ08834.1\|1841973_1842867_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
QAZ08835.1\|1843243_1844329_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
QAZ08836.1\|1844328_1845228_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
QAZ08837.1\|1845275_1846154_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.1e-107	64.8
QAZ08838.1\|1846154_1846706_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.0e-52	58.0
QAZ08839.1\|1846711_1847686_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
QAZ08840.1\|1847701_1848475_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
QAZ08841.1\|1848479_1849559_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5
QAZ08842.1\|1849585_1850899_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	9.1e-52	35.1

DBSCAN-SWA_5

1944032 : 1954649

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ08931.1\|1944032_1944506_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	1.6e-38	76.6
QAZ08932.1\|1945152_1945443_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	5.2e-08	49.1
QAZ08933.1\|1945814_1946612_-	protein MtfA	NA	NA	NA	NA
QAZ08934.1\|1947092_1947254_+	hypothetical protein	NA	NA	NA	NA
QAZ08935.1\|1947380_1947800_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
QAZ08936.1\|1947802_1949071_+	protein UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
QAZ08937.1\|1949526_1949739_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
QAZ11643.1\|1949749_1949938_+	cold-shock protein	NA	NA	NA	NA
QAZ08938.1\|1950197_1951409_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	1.3e-108	56.0
QAZ08939.1\|1952058_1952370_+	hypothetical protein	NA	NA	NA	NA
QAZ08940.1\|1952449_1953145_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	7.3e-08	27.1
QAZ08941.1\|1953218_1954649_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_6

2059567 : 2094618

Salmonella_phage(25.0%)

integrase,protease,tail

attL 2061325:2061340|attR 2076361:2076376

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ09056.1\|2059567_2060647_-\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	8.7e-101	52.5
2061325:2061340	attL	NA	NA	NA	NA
QAZ09057.1\|2061780_2062068_+	lytic enzyme	Q8HA86	Salmonella_phage	8.1e-38	92.7
QAZ09058.1\|2062855_2063023_-	lytic enzyme	NA	NA	NA	NA
QAZ09059.1\|2063087_2063276_-	hypothetical protein	NA	NA	NA	NA
QAZ09060.1\|2063748_2064630_+\|tail	phage tail protein	A0A0M4RTP2	Salmonella_phage	1.4e-64	74.9
QAZ09061.1\|2064726_2064927_-	phage virulence factor	NA	NA	NA	NA
QAZ09062.1\|2065128_2065233_-\|tail	phage tail protein	NA	NA	NA	NA
QAZ09063.1\|2065495_2065621_+	arsenic transporter	NA	NA	NA	NA
QAZ09064.1\|2065749_2066016_+	hypothetical protein	NA	NA	NA	NA
QAZ09065.1\|2066768_2067383_-	disulfide bond formation protein B	NA	NA	NA	NA
QAZ09066.1\|2067392_2067551_-	hypothetical protein	NA	NA	NA	NA
QAZ09067.1\|2067683_2068598_-	protein PagO	NA	NA	NA	NA
QAZ11648.1\|2069215_2069416_+	hypothetical protein	NA	NA	NA	NA
QAZ09068.1\|2069706_2069955_+	hypothetical protein	NA	NA	NA	NA
QAZ09069.1\|2069892_2070261_-\|integrase	integrase	K7PHK0	Enterobacteria_phage	5.4e-18	39.8
QAZ09070.1\|2071724_2071865_-	hypothetical protein	NA	NA	NA	NA
QAZ09071.1\|2072029_2072299_-	hypothetical protein	B6SCX2	Bacteriophage	3.1e-07	47.9
QAZ09072.1\|2072345_2072540_+	hypothetical protein	NA	NA	NA	NA
QAZ09073.1\|2072671_2073091_+	N-acetyltransferase	NA	NA	NA	NA
QAZ09074.1\|2076163_2077177_-	acyltransferase	NA	NA	NA	NA
2076361:2076376	attR	NA	NA	NA	NA
QAZ09075.1\|2077873_2078077_-	fimbrial protein	NA	NA	NA	NA
QAZ09076.1\|2078260_2078545_-	hypothetical protein	NA	NA	NA	NA
QAZ09077.1\|2080061_2080538_-	hypothetical protein	NA	NA	NA	NA
QAZ09078.1\|2080865_2081261_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	7.0e-16	32.8
QAZ09079.1\|2081944_2082667_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
QAZ09080.1\|2082951_2083116_+	hypothetical protein	NA	NA	NA	NA
QAZ09081.1\|2083338_2083989_+	serine/threonine-protein phosphatase 1	A0A222YWF0	Escherichia_phage	1.1e-58	51.4
QAZ09082.1\|2084007_2084199_-	DUF1482 domain-containing protein	NA	NA	NA	NA
QAZ09083.1\|2084309_2084549_-	DUF1480 domain-containing protein	NA	NA	NA	NA
QAZ11649.1\|2084663_2086103_-	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
QAZ09084.1\|2086180_2088820_-	MCE family protein	NA	NA	NA	NA
QAZ09085.1\|2088782_2090066_-	paraquat-inducible protein A	NA	NA	NA	NA
QAZ09086.1\|2090107_2090692_+	Free methionine-R-sulfoxide reductase	NA	NA	NA	NA
QAZ09087.1\|2090789_2091476_+	RNA chaperone ProQ	NA	NA	NA	NA
QAZ09088.1\|2091495_2093544_+\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
QAZ09089.1\|2093736_2094618_+\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_7

2863973 : 2950641

Salmonella_phage(46.55%)

integrase,holin,tail,tRNA,head,capsid,terminase,protease,lysis,portal

attL 2888065:2888084|attR 2961793:2961812

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ09851.1\|2863973_2864654_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	9.8e-82	71.0
QAZ09852.1\|2865272_2865932_+	transmembrane protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
QAZ09853.1\|2866018_2866348_+	sulfurtransferase TusE	NA	NA	NA	NA
QAZ09854.1\|2866344_2866626_-	acylphosphatase	NA	NA	NA	NA
QAZ09855.1\|2866674_2867454_-	AraC family transcriptional regulator	NA	NA	NA	NA
QAZ09856.1\|2867479_2868028_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
QAZ09857.1\|2868242_2869454_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
QAZ09858.1\|2869511_2869829_+	heat-shock protein HspQ	NA	NA	NA	NA
QAZ09859.1\|2869873_2870290_-	CoA-binding protein	NA	NA	NA	NA
QAZ09860.1\|2870460_2871123_+	hypothetical protein	NA	NA	NA	NA
QAZ09861.1\|2871217_2871676_+	methylglyoxal synthase	NA	NA	NA	NA
QAZ09862.1\|2871711_2873766_-	DNA helicase IV	A7KV33	Bacillus_phage	1.1e-19	27.6
QAZ09863.1\|2873889_2874336_+	YccF domain-containing protein	NA	NA	NA	NA
QAZ09864.1\|2874354_2876508_+	TIGR01666 family membrane protein	NA	NA	NA	NA
QAZ09865.1\|2876494_2877100_-	DNA transformation protein	NA	NA	NA	NA
QAZ09866.1\|2877316_2877826_+	cell division inhibitor SulA	NA	NA	NA	NA
QAZ09867.1\|2878182_2879235_+	porin OmpA	NA	NA	NA	NA
QAZ09868.1\|2879306_2879759_-	macrodomain Ter protein	NA	NA	NA	NA
QAZ09869.1\|2879944_2881705_+\|protease	Lon protease family protein	NA	NA	NA	NA
QAZ09870.1\|2881773_2882292_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
QAZ09871.1\|2882391_2882559_-	ribosome modulation factor	NA	NA	NA	NA
QAZ09872.1\|2882814_2883378_-	hypothetical protein	NA	NA	NA	NA
QAZ09873.1\|2883374_2885015_-	paraquat-inducible protein B	NA	NA	NA	NA
QAZ09874.1\|2885019_2886273_-	paraquat-inducible protein A	NA	NA	NA	NA
QAZ09875.1\|2886287_2888195_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
2888065:2888084	attL	NA	NA	NA	NA
QAZ09876.1\|2888207_2890316_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
QAZ09877.1\|2890414_2891524_+	hypothetical protein	NA	NA	NA	NA
QAZ09878.1\|2891520_2892063_-	cell division protein ZapC	NA	NA	NA	NA
QAZ09879.1\|2892228_2893239_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
QAZ09880.1\|2893446_2896059_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.8e-20	22.8
QAZ09881.1\|2896485_2896677_+	DNA-damage-inducible protein I	S4TNM0	Salmonella_phage	6.2e-26	95.2
QAZ09882.1\|2896947_2897634_+	virulence protein	NA	NA	NA	NA
QAZ09883.1\|2897993_2898620_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	2.4e-66	64.8
QAZ09884.1\|2899091_2900060_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	1.3e-191	98.4
QAZ09885.1\|2900205_2900538_+\|tail	tail assembly chaperone	A0A1B0VCD0	Salmonella_phage	4.4e-19	63.4
QAZ09886.1\|2901181_2901700_-\|tail	phage tail protein	A0A0U2QV64	Escherichia_phage	2.5e-45	51.4
QAZ09887.1\|2901714_2904393_-	shikimate transporter	A0A1B0VFW4	Salmonella_phage	1.0e-145	62.8
QAZ09888.1\|2904446_2904689_-	hypothetical protein	NA	NA	NA	NA
QAZ09889.1\|2904727_2905603_-\|tail	phage tail protein	K7PKJ2	Enterobacteria_phage	2.6e-50	78.8
QAZ09890.1\|2908149_2908854_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.4e-67	63.1
QAZ09891.1\|2908751_2909489_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.8e-113	75.6
QAZ09892.1\|2909498_2910194_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.0e-89	66.7
QAZ09893.1\|2910283_2910817_+	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
QAZ09894.1\|2910933_2911431_-	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
QAZ09895.1\|2911529_2911862_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	4.4e-35	61.5
QAZ09896.1\|2911858_2914951_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	2.6e-270	57.7
QAZ09897.1\|2914934_2915237_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	2.8e-25	58.6
QAZ09898.1\|2915257_2915647_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	1.5e-31	58.9
QAZ09899.1\|2915695_2916448_-\|tail	phage tail protein	A5LH35	Enterobacteria_phage	1.9e-94	70.0
QAZ09900.1\|2916460_2916862_-\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	8.1e-44	59.8
QAZ09901.1\|2916861_2917461_-\|tail	phage tail protein	A0A291AWZ0	Escherichia_phage	8.3e-69	68.7
QAZ09902.1\|2917470_2917827_-\|tail	phage tail protein	K7P6U9	Enterobacteria_phage	1.8e-31	58.5
QAZ09903.1\|2917837_2918212_-	DNA breaking-rejoining protein	A0A2R9YJP4	Escherichia_phage	4.8e-06	34.9
QAZ09904.1\|2918275_2919304_-\|capsid	minor capsid protein E	A0A2I6TCE5	Escherichia_phage	2.4e-108	58.4
QAZ09905.1\|2919358_2919706_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	4.6e-19	52.7
QAZ09906.1\|2919705_2921220_-	scaffolding protein	A0A0K2FI53	Enterobacteria_phage	2.1e-100	51.8
QAZ09907.1\|2921209_2922796_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	3.2e-184	60.5
QAZ09908.1\|2922792_2922996_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	1.0e-18	80.0
QAZ09909.1\|2922979_2924914_-\|terminase	terminase	E4WL19	Enterobacteria_phage	7.0e-258	66.1
QAZ09910.1\|2924885_2925431_-\|terminase	terminase small subunit	K7P7G0	Enterobacteria_phage	4.5e-53	61.3
QAZ09911.1\|2925444_2925660_-	hypothetical protein	NA	NA	NA	NA
QAZ11682.1\|2925899_2926346_-\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	7.1e-65	89.7
QAZ09912.1\|2926363_2926816_-	lysozyme	A0A0M4R365	Salmonella_phage	1.4e-79	98.0
QAZ11683.1\|2926799_2927129_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
QAZ09913.1\|2927404_2928091_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	1.8e-131	99.6
QAZ09914.1\|2928451_2928901_+	hypothetical protein	NA	NA	NA	NA
QAZ09915.1\|2929036_2929162_-	hypothetical protein	NA	NA	NA	NA
QAZ09916.1\|2929335_2929653_-	hypothetical protein	NA	NA	NA	NA
QAZ09917.1\|2929719_2930517_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
QAZ09918.1\|2930506_2930653_-	hypothetical protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
QAZ09919.1\|2930649_2931261_-	protein NinG	A0A0M4RU10	Salmonella_phage	4.2e-92	99.5
QAZ09920.1\|2931263_2931470_-	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
QAZ09921.1\|2931469_2932072_-	hypothetical protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
QAZ09922.1\|2932154_2932376_-	hypothetical protein	NA	NA	NA	NA
QAZ09923.1\|2932487_2932721_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
QAZ09924.1\|2933012_2933303_-	hypothetical protein	NA	NA	NA	NA
QAZ09925.1\|2933380_2933692_-	hypothetical protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
QAZ09926.1\|2933688_2934036_-	DNA-binding protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
QAZ09927.1\|2934046_2934796_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
QAZ09928.1\|2934798_2935782_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
QAZ09929.1\|2935866_2936241_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
QAZ09930.1\|2936206_2936446_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
QAZ09931.1\|2936565_2936976_+	transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
QAZ09932.1\|2937025_2937286_+	hypothetical protein	NA	NA	NA	NA
QAZ09933.1\|2937278_2937437_+	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
QAZ09934.1\|2937458_2937809_+	DNA breaking-rejoining protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
QAZ09935.1\|2937935_2940863_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	98.9
QAZ09936.1\|2940825_2941983_+	enterohemolysin	S4TTE8	Salmonella_phage	1.6e-217	100.0
QAZ09937.1\|2942025_2942265_+	DUF4060 domain-containing protein	S4TR31	Salmonella_phage	2.0e-37	100.0
QAZ09938.1\|2942305_2942554_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
QAZ09939.1\|2942598_2943891_+\|integrase	integrase	S4TSP2	Salmonella_phage	1.0e-252	99.8
QAZ09940.1\|2944085_2945288_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
QAZ09941.1\|2945368_2946802_-	sodium:alanine symporter family protein	NA	NA	NA	NA
QAZ09942.1\|2947047_2948262_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
QAZ09943.1\|2948348_2948582_+	hypothetical protein	NA	NA	NA	NA
QAZ09944.1\|2948578_2949040_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
QAZ09945.1\|2949240_2950641_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
2961793:2961812	attR	NA	NA	NA	NA

DBSCAN-SWA_8

3015071 : 3022384

Ralstonia_phage(16.67%)

integrase,protease

attL 3009946:3009960|attR 3021120:3021134

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3009946:3009960	attL	NA	NA	NA	NA
QAZ09993.1\|3015071_3015449_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	2.6e-20	41.0
QAZ09994.1\|3015610_3015808_+	hypothetical protein	NA	NA	NA	NA
QAZ09995.1\|3016020_3018297_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
QAZ09996.1\|3018327_3018648_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
QAZ09997.1\|3018971_3019193_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
QAZ09998.1\|3019147_3019342_-	hypothetical protein	NA	NA	NA	NA
QAZ09999.1\|3019322_3021269_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	9.1e-40	42.3
3021120:3021134	attR	NA	NA	NA	NA
QAZ10000.1\|3021265_3022384_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_9

4372416 : 4411660

Burkholderia_phage(53.33%)

plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAZ11199.1\|4372416_4373415_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
QAZ11200.1\|4373502_4374813_-	conjugal transfer protein	NA	NA	NA	NA
QAZ11201.1\|4375059_4375575_+	transcriptional regulator Zur	NA	NA	NA	NA
QAZ11202.1\|4375673_4375883_-	CsbD family protein	NA	NA	NA	NA
QAZ11742.1\|4375904_4376018_-	hypothetical protein	NA	NA	NA	NA
QAZ11203.1\|4376014_4377340_-	MATE family efflux transporter	NA	NA	NA	NA
QAZ11204.1\|4377518_4378127_-	LexA repressor	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
QAZ11205.1\|4378235_4378604_-	diacylglycerol kinase	NA	NA	NA	NA
QAZ11206.1\|4378774_4381195_+	glycerol-3-phosphate 1-O-acyltransferase	NA	NA	NA	NA
QAZ11207.1\|4381293_4382166_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
QAZ11208.1\|4382179_4382677_-	chorismate--pyruvate lyase	NA	NA	NA	NA
QAZ11209.1\|4382857_4383775_-	maltose operon protein MalM	NA	NA	NA	NA
QAZ11210.1\|4383938_4385297_-	maltoporin	NA	NA	NA	NA
QAZ11211.1\|4385385_4386495_-	maltose/maltodextrin import ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
QAZ11212.1\|4386856_4388047_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
QAZ11213.1\|4388178_4389723_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
QAZ11214.1\|4389737_4390628_+	maltose ABC transporter permease	NA	NA	NA	NA
QAZ11215.1\|4390793_4391204_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
QAZ11216.1\|4391346_4393443_-	YjbH domain-containing protein	NA	NA	NA	NA
QAZ11217.1\|4393442_4394180_-	hypothetical protein	NA	NA	NA	NA
QAZ11218.1\|4394176_4394815_-	YjbF family lipoprotein	NA	NA	NA	NA
QAZ11219.1\|4394878_4395121_-	outer membrane protein	NA	NA	NA	NA
QAZ11220.1\|4395564_4397214_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
QAZ11221.1\|4397558_4398908_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
QAZ11222.1\|4399038_4399386_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
QAZ11223.1\|4399961_4400249_+	hypothetical protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
QAZ11224.1\|4400251_4400857_+	lytic murein transglycosylase	Q5ZQZ1	Pseudomonas_phage	6.5e-61	60.4
QAZ11225.1\|4400869_4401184_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
QAZ11226.1\|4401343_4401799_+	hypothetical protein	NA	NA	NA	NA
QAZ11227.1\|4401795_4401993_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
QAZ11228.1\|4401982_4403410_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
QAZ11229.1\|4403409_4403934_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
QAZ11230.1\|4403985_4404303_+\|tail	phage tail assembly protein	NA	NA	NA	NA
QAZ11231.1\|4404262_4404391_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
QAZ11232.1\|4405700_4407239_+	hypothetical protein	B9UDL6	Salmonella_phage	8.5e-49	29.9
QAZ11233.1\|4407402_4407762_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
QAZ11234.1\|4407752_4408868_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	6.9e-101	52.2
QAZ11235.1\|4408860_4409493_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
QAZ11236.1\|4409495_4410956_+	short-chain fatty acid transporter	A0A0M3ULH6	Salmonella_phage	1.2e-76	38.8
QAZ11237.1\|4410958_4411660_+	DUF4376 domain-containing protein	X2KPE1	Enterobacteria_phage	2.1e-23	38.6

DBSCAN-SWA_10

4560522 : 4596240

Salmonella_phage(45.24%)

integrase,holin,tail,head,plate,capsid,terminase,portal

attL 4560315:4560361|attR 4591294:4591340

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4560315:4560361	attL	NA	NA	NA	NA
QAZ11359.1\|4560522_4560939_+	hypothetical protein	S4TTB4	Salmonella_phage	1.8e-33	52.3
QAZ11360.1\|4560973_4561192_-	transcriptional regulator	S4TNZ3	Salmonella_phage	4.7e-38	100.0
QAZ11361.1\|4561269_4562439_-	hypothetical protein	S4TRX8	Salmonella_phage	1.4e-205	95.6
QAZ11362.1\|4562435_4562921_-\|tail	phage tail protein	S4TUC3	Salmonella_phage	5.9e-81	94.4
QAZ11363.1\|4562932_4565374_-\|tail	phage tail tape measure protein	A0A0M3UL85	Salmonella_phage	0.0e+00	93.1
QAZ11364.1\|4565366_4565522_-\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
QAZ11365.1\|4565518_4565854_-\|tail	phage tail assembly protein	A0A0M4S5P8	Salmonella_phage	1.8e-52	100.0
QAZ11366.1\|4565916_4566435_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	1.4e-93	99.4
QAZ11367.1\|4566450_4567638_-\|tail	phage tail protein	Q6K1H0	Salmonella_virus	2.0e-223	100.0
QAZ11368.1\|4567772_4568342_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.0e-92	86.8
QAZ11369.1\|4568341_4570084_-	hypothetical protein	A0A0M3ULF6	Salmonella_phage	1.5e-267	97.1
QAZ11370.1\|4570094_4570625_-\|tail	phage tail protein I	A0A0M4R4W9	Salmonella_phage	1.9e-104	100.0
QAZ11371.1\|4570617_4571526_-\|plate	baseplate assembly protein	A0A1J0I2M3	Salmonella_phage	1.7e-158	98.7
QAZ11372.1\|4571532_4571880_-\|plate	baseplate assembly protein	A0A0M4RE59	Salmonella_phage	2.1e-56	98.3
QAZ11373.1\|4571876_4572518_-\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.4e-98	85.0
QAZ11746.1\|4572594_4573938_-	DUF4062 domain-containing protein	NA	NA	NA	NA
QAZ11374.1\|4573975_4574443_-	phage virion morphogenesis protein	O80313	Escherichia_phage	9.8e-49	67.8
QAZ11375.1\|4574435_4574903_-\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	2.2e-56	69.0
QAZ11376.1\|4574865_4575111_-\|holin	holin	S4TNY4	Salmonella_phage	5.5e-27	73.1
QAZ11377.1\|4575010_4575424_-	protein lysB	O80310	Escherichia_phage	8.4e-36	59.9
QAZ11378.1\|4575420_4575930_-	lysozyme	A0A218M4K3	Erwinia_phage	4.6e-76	82.6
QAZ11379.1\|4575913_4576135_-	primosomal protein	A0A218M4L5	Erwinia_phage	8.7e-24	71.2
QAZ11380.1\|4576125_4576329_-\|tail	phage tail protein	U5N3E7	Enterobacteria_phage	8.9e-23	76.1
QAZ11381.1\|4576328_4576829_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	3.8e-59	68.5
QAZ11382.1\|4576926_4577685_-\|terminase	terminase	Q94MJ2	Enterobacteria_phage	2.7e-80	67.1
QAZ11383.1\|4577688_4578849_-\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	2.8e-129	62.5
QAZ11384.1\|4578880_4579744_-\|capsid	capsid scaffolding protein	A0A218M4L9	Erwinia_phage	4.5e-100	64.8
QAZ11385.1\|4579908_4581678_+	oxidoreductase	Q9T0R3	Escherichia_phage	3.2e-286	81.0
QAZ11386.1\|4581677_4582715_+\|portal	phage portal protein	Q6K1J0	Salmonella_virus	7.7e-163	78.7
QAZ11387.1\|4583235_4583427_-	hypothetical protein	S4TRZ0	Salmonella_phage	1.1e-27	100.0
QAZ11388.1\|4583425_4583857_+	hypothetical protein	S4TUD6	Salmonella_phage	1.1e-75	100.0
QAZ11389.1\|4583990_4585031_+	cell filamentation protein Fic	S4TP71	Salmonella_phage	6.3e-197	100.0
QAZ11390.1\|4585027_4585225_-	hypothetical protein	NA	NA	NA	NA
QAZ11391.1\|4585403_4587680_-	replication endonuclease	S4TTC1	Salmonella_phage	0.0e+00	88.0
QAZ11392.1\|4587669_4587945_-	hypothetical protein	M1TAP2	Escherichia_phage	7.0e-31	72.5
QAZ11393.1\|4587941_4588166_-	hypothetical protein	A0A0F7LDG9	Escherichia_phage	2.0e-23	75.7
QAZ11394.1\|4588467_4588692_-	DUF2732 domain-containing protein	Q7Y4C2	Escherichia_virus	3.4e-23	78.4
QAZ11395.1\|4588755_4589256_-	replication protein B	M1SV55	Escherichia_phage	1.8e-85	91.0
QAZ11396.1\|4589425_4589698_-	hypothetical protein	Q1JS36	Enterobacteria_phage	1.0e-42	87.8
QAZ11397.1\|4589834_4590128_+	XRE family transcriptional regulator	Q1JS45	Enterobacteria_phage	1.6e-36	75.3
QAZ11398.1\|4590197_4591178_+\|integrase	integrase	S4TP66	Salmonella_phage	1.5e-179	96.0
QAZ11399.1\|4591362_4591863_-	stress adaptor protein CpxP	NA	NA	NA	NA
4591294:4591340	attR	NA	NA	NA	NA
QAZ11400.1\|4592013_4592712_+	DNA-binding response regulator	Q6XM27	Feldmannia_irregularis_virus	5.3e-06	30.3
QAZ11401.1\|4592708_4594082_+	two-component system sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	7.2e-15	25.6
QAZ11402.1\|4594129_4594333_-	hypothetical protein	NA	NA	NA	NA
QAZ11403.1\|4594453_4594849_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
QAZ11404.1\|4594860_4595613_-	MOSC domain-containing protein	NA	NA	NA	NA
QAZ11405.1\|4595619_4596240_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	2.4e-63	58.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025232

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection