CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP035487	Escherichia coli strain NissleGFP_pZE21 plasmid pMut2, complete sequence	0 crisprs	NA	0
CP035488	Escherichia coli strain NissleGFP_pZE21 plasmid pMut1, complete sequence	0 crisprs	NA	0
CP035489	Escherichia coli strain NissleGFP_pZE21 plasmid pZE21, complete sequence	0 crisprs	NA	0
CP035486	Escherichia coli strain NissleGFP_pZE21 chromosome, complete genome	2 crisprs	cas14j,DinG,cas3,DEDDh,csa3,c2c9_V-U4,WYL	8

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP035486_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035486_1

2603968-2604081

Orphan

Consensus_repeat	Method
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035486_1

>merge|CP035486|1|2603968-2604081|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCACTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGGTTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

>CP035486|1|1|2603968-2604081|CRISPRCasFinder
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA	CTGGATGCCCAGATGCGGCATGAACGCCCTACCCAGCCTACGATGCGG
TTTGTAGGCCGGATAAGCGAAGCGCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP035486.1\|QAY40023.1\|2613365_2614292_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
CP035486.1\|QAY42301.1\|2597190_2600949_-\|AIDA-I-family-autotransporter-YfaL	unknown	unknown	gnl\|CDD\|182059
CP035486.1\|QAY40011.1\|2591097_2591721_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
CP035486.1\|QAY40015.1\|2604105_2605236_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
CP035486.1\|QAY40013.1\|2593554_2596182_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
CP035486.1\|QAY40016.1\|2605235_2605490_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
CP035486.1\|QAY40022.1\|2611982_2613173_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
CP035486.1\|QAY42300.1\|2596328_2597051_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
CP035486.1\|QAY42299.1\|2586559_2590954_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
CP035486.1\|QAY40018.1\|2606396_2607473_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
CP035486.1\|QAY40008.1\|2582870_2584055_+\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
CP035486.1\|QAY40021.1\|2610726_2611986_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
CP035486.1\|QAY40009.1\|2584128_2584905_-\|DUF2135-domain-containing-protein	unknown	unknown	gnl\|CDD\|227021
CP035486.1\|QAY40017.1\|2605543_2606194_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
CP035486.1\|QAY40012.1\|2591717_2593406_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
CP035486.1\|QAY40020.1\|2609108_2610737_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
CP035486.1\|QAY40024.1\|2614332_2615136_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
CP035486.1\|QAY40010.1\|2584909_2586559_-\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
CP035486.1\|QAY40019.1\|2607477_2608836_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
CP035486.1\|QAY40014.1\|2601630_2603916_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649

Protein	Function_ID	Function_description	E-value
CP035486.1\|QAY40023.1\|2613365_2614292_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
CP035486.1\|QAY42301.1\|2597190_2600949_-\|AIDA-I-family-autotransporter-YfaL	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
CP035486.1\|QAY40011.1\|2591097_2591721_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	4.78627e-139
CP035486.1\|QAY40015.1\|2604105_2605236_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
CP035486.1\|QAY40013.1\|2593554_2596182_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
CP035486.1\|QAY40016.1\|2605235_2605490_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
CP035486.1\|QAY40022.1\|2611982_2613173_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
CP035486.1\|QAY42300.1\|2596328_2597051_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	3.80247e-169
CP035486.1\|QAY42299.1\|2586559_2590954_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
CP035486.1\|QAY40018.1\|2606396_2607473_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
CP035486.1\|QAY40008.1\|2582870_2584055_+\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
CP035486.1\|QAY40021.1\|2610726_2611986_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
CP035486.1\|QAY40009.1\|2584128_2584905_-\|DUF2135-domain-containing-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	2.9978e-151
CP035486.1\|QAY40017.1\|2605543_2606194_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.02722e-157
CP035486.1\|QAY40012.1\|2591717_2593406_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
CP035486.1\|QAY40020.1\|2609108_2610737_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
CP035486.1\|QAY40024.1\|2614332_2615136_-\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
CP035486.1\|QAY40010.1\|2584909_2586559_-\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.66557e-125
CP035486.1\|QAY40019.1\|2607477_2608836_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
CP035486.1\|QAY40014.1\|2601630_2603916_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0

>CP035486.1|QAY40014.1|2601630_2603916_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINSLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>CP035486.1|QAY42301.1|2597190_2600949_-|AIDA-I-family-autotransporter-YfaL
MRIISLRKEYLSLLPSMIASLFSANGAAAVIDSCQGYDIKANCQASRQSLSGNMQDWSIADGQWLIFSGMANNASGGAVFLQHSAEFTISPQNETGMTLFADNSVSGEYNNGGAIFAKENSTINLANVIFDSNVAGGYGGAIYSAGTNDTGAADLRVTNAVFHNNIANDGKGGAIYTINNDVYLSDDAFNNNQAYTSTSYSDGDGGAIDVTDNSTDNTHLSGKTIINNTSFTNNYAEGYGGAIYTSSTTSPYLIDISVDDNYDQNNGVMIDENNSASGYDHSATAAAGGFMYIGHSVAEFNIAADKTLVIGNTSNDGAIDSLAGTGVIVKEGAGELVLNADNNAFTGEMSIQNGEVTLGRSDELMNVGDTHCQSDPQDCFGLMVGSTVHSEYQAELNVGNTQQTFVHSLTGFANGILNIDAGGNVTVNQGGFSGSIQGEGQLTVAQDGSYLLTGAQSMALTGDIVVEDNAVLSLAGNQADLRAMQSDPQSIVLNGGVLDLSDFTTWDGDSSYNDGLQISGSGGTVIGSNDVVDISSGDDLHIGGSDASQNGVYVVINAGDQRVTLANNNGYLGNTQIASGTLEVSDNSQLGDTSYNRSVIFTDPQQHSEMDVTTDVDTRSATTGQGRNIEMRADGEIHVEDGVDTQWGGLMADSTGQQLDSVSTLTKSGGGTLELTASGTATSAVRVEDGTLKGEAENIIPYVSSLWVGEDGVFETGQNQDIRSIDATSGGDIDITDGTVLRLTQQDTNQALDASLFSGDGTLVNATDGVTLAGELNTNLETDSLTYLSDVTVNGNLTNTSGAISLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSASDQLVLNGNTAGNTAVVINPITGIGEPTSTGIKVVDFAADPAQFQNNAQFSLTGSGYVNMGAYDYTLVEDNNDWYLRSQEVNPTPPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYFNNLRAANQAFVMERRDHAGGDGQTLNLRVIGGRYHYTAVGQLAQHEDTSTVQLSGNLFSGHWGDDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWYQHGNQKQGAWLDSWLQYAWFNNDVSEQDDGVDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANHARVSQSQGDDIQTRLGLHSEWRTAVSVTPTLDLNYYHDPHATEIEEDGSTISDDAAKQRGEIKVGITGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>CP035486.1|QAY42300.1|2596328_2597051_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASHWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVVQTSLKERHMTGLHYNPITNTFKLGPGVDVNYMLHTQNK
>CP035486.1|QAY40013.1|2593554_2596182_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTSEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>CP035486.1|QAY40012.1|2591717_2593406_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPKKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETIPVYQLRYNGNNVLMFATYQDKILAFSSSDMLFKDDQQDTEATAIASDLLSGKKRWETRFGLEARTAEKTPVRQRIVVSARLLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGGAGRCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQALNKTRPAMVDVIPTDGIVPLYINPQGMAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>CP035486.1|QAY40011.1|2591097_2591721_-|DUF1175-domain-containing-protein
MRHGLLVLICWLYCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANEALKVHDSKWLKSNGLSNQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYIIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>CP035486.1|QAY42299.1|2586559_2590954_-|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPVEPQQGVKLEGASSNFISPQPGNIYIPLGKQEPGLYLVEAIVGGYRATTVVFVSDTVALSKVSGNELLVWTAGKKQGEAKTGSEILWTDGLGVMTRGVTDGSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRKQVYSSSFRVANYIKPHFEIGLALDKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDDNGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGELVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTSHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKSLYMKWSMPTVYRMGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALTLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGVRFTWWGEDGNGDAFLTAWAWYADWQASQALGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTSDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEIMLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAGKQQGQLLEKARNEMGELAYMLPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAPGSEWTGMQVK
>CP035486.1|QAY40010.1|2584909_2586559_-|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDTLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIDVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWATGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVLVDLFARYPLKKVTEEKSTTAFKPGVLNGRYRVTFANGNHMTFVSHGETTLLTVKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRVTEGTLSWRHATAQAGQGERYDQILAFAYPDNNLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>CP035486.1|QAY40009.1|2584128_2584905_-|DUF2135-domain-containing-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQTINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEYAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>CP035486.1|QAY40008.1|2582870_2584055_+|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSTIDLGATVIKAAIERAKIDSLHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESSALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFEPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>CP035486.1|QAY40015.1|2604105_2605236_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDAEVDTDDLSNFQL
>CP035486.1|QAY40016.1|2605235_2605490_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>CP035486.1|QAY40017.1|2605543_2606194_-|lipopolysaccharide-kinase-InaA
MAVSAKHDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKVEGEWRALLVTEDMAGFISIADWYARHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>CP035486.1|QAY40018.1|2606396_2607473_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNVLEPKMGMDLNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>CP035486.1|QAY40019.1|2607477_2608836_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>CP035486.1|QAY40020.1|2609108_2610737_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGINAEAIEPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGEIQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEATLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>CP035486.1|QAY40021.1|2610726_2611986_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYTLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLIIDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFVVLASGSFFSGGLVAERDGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDEALRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHVAQQIAQRAGGQQ
>CP035486.1|QAY40022.1|2611982_2613173_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>CP035486.1|QAY40023.1|2613365_2614292_+|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSEGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGEASPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIQEIAERSPLQKERLMTIAERLRQEGHQIGWQEGKLEGLQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>CP035486.1|QAY40024.1|2614332_2615136_-|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLTNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASHPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRVKGSY

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Crispr_ID: CP035486_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP035486_2

4911140-4911286

Orphan

Consensus_repeat	Method
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP035486_2

>merge|CP035486|2|4911140-4911286|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>CP035486|2|2|4911140-4911286|CRISPRCasFinder
GTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGC
GTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
CP035486.1\|QAY42050.1\|4915401_4916904_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
CP035486.1\|QAY42040.1\|4903483_4903936_+\|YhcH/YjgK/YiaL-family-protein	unknown	unknown	gnl\|CDD\|225345
CP035486.1\|QAY42045.1\|4907670_4910526_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
CP035486.1\|QAY42054.1\|4921804_4922134_-\|DUF1643-domain-containing-protein	unknown	unknown	gnl\|CDD\|226783
CP035486.1\|QAY42370.1\|4901585_4902806_-\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
CP035486.1\|QAY42042.1\|4905146_4905563_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
CP035486.1\|QAY42038.1\|4899614_4900619_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
CP035486.1\|QAY42051.1\|4917033_4918053_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
CP035486.1\|QAY42046.1\|4910525_4910969_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
CP035486.1\|QAY42041.1\|4903980_4904985_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
CP035486.1\|QAY42049.1\|4914200_4915283_+\|lipopolysaccharide-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
CP035486.1\|QAY42056.1\|4923037_4923883_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379095
CP035486.1\|QAY42043.1\|4905740_4906244_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP035486.1\|QAY42055.1\|4922463_4923024_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
CP035486.1\|QAY42039.1\|4900642_4901575_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|183466
CP035486.1\|QAY42044.1\|4906436_4907624_+\|DUF898-family-protein	unknown	unknown	gnl\|CDD\|226719
CP035486.1\|QAY42052.1\|4918423_4920334_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271184
CP035486.1\|QAY42053.1\|4920466_4920799_-\|NIPSNAP-family-protein	unknown	unknown	unknown
CP035486.1\|QAY42048.1\|4913100_4914201_+\|lipopolysaccharide-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
CP035486.1\|QAY42047.1\|4911322_4912834_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863

Protein	Function_ID	Function_description	E-value
CP035486.1\|QAY42050.1\|4915401_4916904_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
CP035486.1\|QAY42040.1\|4903483_4903936_+\|YhcH/YjgK/YiaL-family-protein	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	4.82284e-65
CP035486.1\|QAY42045.1\|4907670_4910526_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
CP035486.1\|QAY42370.1\|4901585_4902806_-\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
CP035486.1\|QAY42042.1\|4905146_4905563_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	7.57352e-69
CP035486.1\|QAY42038.1\|4899614_4900619_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
CP035486.1\|QAY42051.1\|4917033_4918053_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	6.7524e-167
CP035486.1\|QAY42046.1\|4910525_4910969_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	1.88895e-65
CP035486.1\|QAY42041.1\|4903980_4904985_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
CP035486.1\|QAY42049.1\|4914200_4915283_+\|lipopolysaccharide-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
CP035486.1\|QAY42056.1\|4923037_4923883_+\|hypothetical-protein	gnl\|CDD\|379095	pfam13271, DUF4062, Domain of unknown function (DUF4062). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. There is a conserved SST sequence motif.	1.06006e-05
CP035486.1\|QAY42043.1\|4905740_4906244_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.51706e-18
CP035486.1\|QAY42055.1\|4922463_4923024_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	3.13553e-43
CP035486.1\|QAY42039.1\|4900642_4901575_-\|carbamate-kinase	gnl\|CDD\|183466	PRK12354, PRK12354, carbamate kinase; Reviewed.	0
CP035486.1\|QAY42044.1\|4906436_4907624_+\|DUF898-family-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	3.07847e-106
CP035486.1\|QAY42052.1\|4918423_4920334_+\|site-specific-integrase	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	1.16768e-61
CP035486.1\|QAY42054.1\|4921804_4922134_-\|DUF1643-domain-containing-protein	gnl\|CDD\|226783	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown].	5.3657e-63
CP035486.1\|QAY42048.1\|4913100_4914201_+\|lipopolysaccharide-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
CP035486.1\|QAY42047.1\|4911322_4912834_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0

>CP035486.1|QAY42046.1|4910525_4910969_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTCFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>CP035486.1|QAY42045.1|4907670_4910526_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDIYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIVDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>CP035486.1|QAY42044.1|4906436_4907624_+|DUF898-family-protein
MNDVNIGKDNSRHSFVFTGKGGEYFLICLVNFLLTIITLGIYGPWALIKCRRYIYQHVTLKGQPFSYKGTGGAIFVSMLLIVVVYLLSISCFAGQHFALGLFLFALLICGIPCMAVKSLQYQANMTSLNDIRFGFNCSMMRAWWVMLGLPVLLALVFWFALYLIAQVTTSIGGLFFNLVALSLLSAIGLGVVHGITYSKWMPLLGNNATFGIHKFSIQVNVKECIKGCMLAILTMVPFIIVIGIMIAPVFQQLMMMTMLGGSDAGSEFVLQYYPQIMASYFLYFVAILVFASYLYVTLRNLFLNNLTLANGTIRFHSSVTAIGMLLRMLAVLMGSSITCGLAYPWLKMWMVSWIANNTHVQGDLDSLELTNDDKPQDSGSLMWISRGIMPYVPFI
>CP035486.1|QAY42043.1|4905740_4906244_-|GNAT-family-N-acetyltransferase
MNVVASPALRLRKLTVADNPAIAHVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLRKL
>CP035486.1|QAY42042.1|4905146_4905563_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGDDGDDEDFVDEDDDGIRH
>CP035486.1|QAY42041.1|4903980_4904985_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEARLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVAECSALAQKHGGKITLTEDIASGVKGADFIYTDVWVSMGEPKEKWAERIALLRDYQVNSKMMALTGNSQVKFLHCLPAFHDEQTTLGKKMAAEFGLYGGMEVTDEVFESPASIVFDQAENRMHTIKAVMVATLAK
>CP035486.1|QAY42040.1|4903483_4903936_+|YhcH/YjgK/YiaL-family-protein
MIVGNIHHLQSWLPEELREAIEYIKSHVSDETAKGKHAIDGDRLFYLISEDTTEPGELRRAEYHARYLDIQIVLKGQEGMTFSTQPAGVPETDWLADKDIAFIGQGIDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKLLKS
>CP035486.1|QAY42370.1|4901585_4902806_-|arginine-deiminase
MEKHYVGSEIGQLRSVMLHRPNLSLKRLTPSNCQELLFDDVLSVERAGEEHDIFANTLRQQGIEVLLLTDLLTQTLDIPEAKSWLLETQISDYRLGPTFATDVRTWLAEMSHRDLARHLSGGLTYSEIPASIKNMVVDTHDINDFIMKPLPNHLFTRDTSCWIYNGVSINPMAKPARQRETNNLRAIYRWHPQFAGGEFIKYFGDENINYDHATLEGGDVLVIGRGAVLIGMSERTTPQGIEFLAQALFKHRQAERVIAVELPKHRSCMHLDTVMTHIDIDTFSVYPEVVRPDVNCWTLTPDGHGGLKRTQESTLLHAIEKALGIDQVRLITTGGDAFEAEREQWNDANNVLTLRPGVVVGYERNIWTNEKYDKAGITVLPIPGDELGRGRGGARCMSCPLHRDGI
>CP035486.1|QAY42039.1|4900642_4901575_-|carbamate-kinase
MENKPTLVIALGGNALLKRGEPLEAEIQRKNIDLAAKTIAQLTQHWRVVLVHGNGPQVGLLALQNSAYAHVAPYPLDILGAESQGMIGYMLQQALKNQLPQREISVLLTQVEVDANDPAFSNPTKYIGPIYDHAQTQVLQAEKGWVFKADGHSFRRVVPSPQPKRIVERDAIQTLIAHDHLVICNGGGGVPVVEKADGYHGIEAVIDKDLSAALLASQIHADALLILTDADAVYLDWGKPTQRPLAQVTPELLNEMQFDAGSMGPKVTACAKFVSQCRGIAGIGSLADGPEILAGDKGTLIRLDTPHNHA
>CP035486.1|QAY42038.1|4899614_4900619_-|ornithine-carbamoyltransferase
MATSLKNRNFLKLLDYTPAEIQYLIDLAINLKAAKKSGNEKQTLVGKNIALIFEKSSTRTRCAFEVAAFDQGAQVTYIGPSGSQIGHKESMKDTARVLGRMYDGIEYRGYGQNIVEELGEFAGVPVWNGLTNEFHPTQILADLMTMLEHAPGKTLPELSFAYLGDARNNMGNSLMVGAAKMGMDIRLVAPKSFWPDEALVTQCREIASVTGARITLTEDVEEGVYDVDFLYTDVWVSMGEPKEAWAERVSLMAPYQINQQVITATRNPEVKFMHCLPAFHNEHTTVGREIEMAYGLKGLEVTEEVFESAHSIVFDEAENRMHTIKAVMVATLGD
>CP035486.1|QAY42047.1|4911322_4912834_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>CP035486.1|QAY42048.1|4913100_4914201_+|lipopolysaccharide-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMCTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>CP035486.1|QAY42049.1|4914200_4915283_+|lipopolysaccharide-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>CP035486.1|QAY42050.1|4915401_4916904_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLARLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDLMRTDANGKGVINILSAEKLYQMPKLYAASLLWMISELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEMLQKGVQASIEQQNNPPAKGKEIAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR
>CP035486.1|QAY42051.1|4917033_4918053_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIKSYAAKEAGGELEVYEYDPGELKPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDTCISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGTDKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>CP035486.1|QAY42052.1|4918423_4920334_+|site-specific-integrase
MSQRYKLYRRTSGIYVVRISIPQRFRRYAGQCEIHTSTGTHDLHEAKQKSALLLAVWYQTLQEYEQLDYRTLSDCAPLLAGEGMISLSNFAQSVELPVAQLIQAVMNRNLPVFWLATGQAGFYVAALSEAELDPLDGSYVLNYGEEKGIEGVAKGYLQLTAQPAHLRNIISDGYSEASVFKTAGSDAKGGWFFTSGWPVIKPDTLLINKVHAESLRLDWLAKTTPPVASVHPTVPLAAPAPTIDNEYVNRKYYTKNLSWLCSEYLKHRRKGKVSESAISDIRNYFSFMIEAMGDIQLEDFDRDFLRAYESKLRTIPANRNLVKAKYGVKTLDQLIAKAAECGDKLMTEESVRKYINGIYGAMKWAVADGKLLKSPCENFFPSDDKDERDQDHTDIFEPHEIKAIFSLPWFEAGTVERNAQGRFHQYCPFNYWAPLLGLMTGARVNEIAQLLLSDVLADDGVYYLNLESDNESGKKLKNANARRKIPLHSKLISLGFIDYVNALKDAGYTRLFPELKPHKTKGYGRPVSAWFNESLLAGRLKLERNRSKSFHSFRHSVSTLLKEKGVSSELRAQLLGHVRGETETEVRYSKDLKPIHMIEVVEKIDFSLPDIAEFNIPDGLDAVRDALRRKRGKQTG
>CP035486.1|QAY42053.1|4920466_4920799_-|NIPSNAP-family-protein
MRTVEILQYTLRKGSGAAFHAIMQEISVPLHQRHGIDVVSFGNSLHDPDCYYLIRAFVSPKSMTTVLDAFYASDDWRSGPREDIIGNIEASIKTVINLPSESVEGLRVQS
>CP035486.1|QAY42054.1|4921804_4922134_-|DUF1643-domain-containing-protein
MSRCISFAKSWGYGGVYMANLFAFVHTQRHEMMKASDPIGKDNDSHLIRLVSGAGLVVAAWGNEGRHLKRSTTVRQLLPESTMCFVLNATGEPKHPLYMKNDSVLIPLG
>CP035486.1|QAY42055.1|4922463_4923024_+|recombinase-family-protein
MATFGYGRVSTSQQDTENQRLELGQAGWQIDYWFADVVSGKVPAMQRKAFSEMLNKIRDGETLVVAKLDRLGRDAIDVLQTVRALADRNIKVLVHQLGNTDLTSAAGKLLLSMLAAVAEMERDLLIERTQAGLSRAKAEGKKLGRPPKIASEARREILEKKNSGLSISALARQYGVSRATVAAITD
>CP035486.1|QAY42056.1|4923037_4923883_+|hypothetical-protein
MAYTATVIPVMIASPGDVAEERQVIREMIHEWNDINSARSKVMLTPIGWETHTSPELGVRPQELINQRLLVDCDLLIGVFWTRLGSPTGNEASGTVEEIHRHLNAGKPAMIYFSSKPVAPESLDREQYESLKLFKTECMQKGLIESFNDLSDFKEKVRRQLSIIISSSPYLSSLISTINNSPDANTSQSLPESNLSADALSLLKLACVDDSGTIYVIRHLGGTDIQAGNQSFGGSSAREVARWEGALNELLSFDFVIERGAKGQMYYVTHKGWTFLESLNE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

163683 : 226013

Erysipelothrix_phage(10.0%)

bacteriocin,transposase,tRNA,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY37867.1\|163683_163974_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
QAY37868.1\|164132_164369_+	HNH endonuclease	NA	NA	NA	NA
QAY37869.1\|164371_164665_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
QAY37870.1\|164820_165060_+	hypothetical protein	NA	NA	NA	NA
QAY37871.1\|165060_165351_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
QAY37872.1\|165806_166571_+	pyruvate dehydrogenase complex transcriptional repressor PdhR	NA	NA	NA	NA
QAY37873.1\|166731_169395_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
QAY37874.1\|169409_171302_+	pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
QAY42188.1\|171509_172934_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	4.2e-42	27.8
QAY37875.1\|173175_174957_-	DUF3300 domain-containing protein	NA	NA	NA	NA
QAY37876.1\|175311_177909_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
QAY37877.1\|178083_178446_+	UPF0231 family protein	NA	NA	NA	NA
QAY37878.1\|178483_179278_-	adenosylmethionine decarboxylase	NA	NA	NA	NA
QAY37879.1\|179293_180160_-	polyamine aminopropyltransferase	NA	NA	NA	NA
QAY37880.1\|180265_180613_-	hypothetical protein	NA	NA	NA	NA
QAY37881.1\|180778_182329_+	multicopper oxidase CueO	A0A0C6DWA2	Mamastrovirus	2.1e-18	55.4
QAY37882.1\|182406_184797_-	glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase	NA	NA	NA	NA
QAY37883.1\|185002_185539_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	5.1e-17	33.1
QAY37884.1\|185579_186242_-	carbonate dehydratase	NA	NA	NA	NA
QAY37885.1\|186350_187277_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-21	34.0
QAY37886.1\|187273_188044_+	ABC transporter permease	NA	NA	NA	NA
QAY37887.1\|188148_188589_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
QAY37888.1\|188652_189882_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
QAY37889.1\|189885_190266_-	aspartate 1-decarboxylase	NA	NA	NA	NA
QAY37890.1\|190539_191484_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.5e-60	49.8
QAY37891.1\|191552_191750_+\|transposase	transposase	NA	NA	NA	NA
QAY37892.1\|191831_192683_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
QAY37893.1\|192694_193489_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
QAY37894.1\|193600_194866_-	fimbrial-like adhesin	NA	NA	NA	NA
QAY37895.1\|194915_195512_-	fimbrial protein StaF	NA	NA	NA	NA
QAY37896.1\|195538_196147_-	fimbrial-like protein YadL	NA	NA	NA	NA
QAY37897.1\|196158_196725_-	fimbrial protein	NA	NA	NA	NA
QAY37898.1\|196741_199330_-	outer membrane usher protein	NA	NA	NA	NA
QAY37899.1\|199364_200105_-	fimbrial chaperone	NA	NA	NA	NA
QAY37900.1\|200213_200804_-	fimbrial protein	NA	NA	NA	NA
QAY37901.1\|201167_201647_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
QAY37902.1\|201643_203062_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.2e-26	37.9
QAY37903.1\|203100_204027_-\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
QAY37904.1\|204063_204519_-	RNA polymerase-binding transcription factor DksA	NA	NA	NA	NA
QAY37905.1\|204696_205401_-	DNA/RNA nuclease SfsA	NA	NA	NA	NA
QAY37906.1\|205415_205946_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA
QAY37907.1\|206019_208449_+	ATP-dependent helicase HrpB	A0A0G2Y9F4	Acanthamoeba_polyphaga_mimivirus	2.7e-41	28.6
QAY37908.1\|208542_211077_+	bifunctional glycosyl transferase/transpeptidase	NA	NA	NA	NA
QAY37909.1\|211296_213555_+	ferrichrome porin FhuA	NA	NA	NA	NA
QAY37910.1\|213605_214403_+	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	G9BWD6	Planktothrix_phage	6.0e-14	26.9
QAY37911.1\|214402_215293_+	Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA	NA	NA	NA
QAY37912.1\|215289_217272_+	Fe(3+)-hydroxamate ABC transporter permease FhuB	NA	NA	NA	NA
QAY37913.1\|217306_218587_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
QAY37914.1\|218811_220233_+	H(+)/Cl(-) exchange transporter ClcA	NA	NA	NA	NA
QAY42189.1\|220256_220322_+	hypothetical protein	NA	NA	NA	NA
QAY37915.1\|220314_220659_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	4.5e-27	51.4
QAY37916.1\|220705_221329_-	TRIC cation channel family protein	NA	NA	NA	NA
QAY37917.1\|221366_222167_-	vitamin B12 ABC transporter substrate-binding protein BtuF	NA	NA	NA	NA
QAY37918.1\|222159_222858_-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
QAY37919.1\|222941_224459_+	dGTPase	NA	NA	NA	NA
QAY37920.1\|224588_226013_+\|protease	serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	2.5e-26	28.8

DBSCAN-SWA_2

1324614 : 1365355

Enterobacteria_phage(56.52%)

lysis,tail,transposase,integrase,terminase,portal,head,capsid,tRNA

attL 1315133:1315146|attR 1340444:1340457

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1315133:1315146	attL	NA	NA	NA	NA
QAY38877.1\|1324614_1325721_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
QAY38878.1\|1325774_1326236_-	NUDIX hydrolase	NA	NA	NA	NA
QAY38879.1\|1326245_1326899_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
QAY38880.1\|1327070_1328321_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-23	100.0
QAY38881.1\|1328434_1328848_-\|integrase	integrase	Q77Z04	Phage_21	2.9e-73	99.3
QAY38882.1\|1328892_1330040_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
QAY38883.1\|1330135_1330717_+	superinfection exclusion protein B	K7P6T7	Enterobacteria_phage	5.2e-92	92.2
QAY38884.1\|1330733_1331006_-	antitermination protein N	A0A0N7C217	Escherichia_phage	2.8e-40	98.9
QAY38885.1\|1330983_1331166_-	hypothetical protein	A0A0N7C057	Escherichia_phage	1.1e-27	98.3
QAY38886.1\|1331442_1332195_-	DUF1828 domain-containing protein	NA	NA	NA	NA
QAY38887.1\|1332191_1332749_-	hypothetical protein	NA	NA	NA	NA
QAY38888.1\|1332788_1333484_-	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	8.6e-134	100.0
QAY38889.1\|1333559_1333775_+	XRE family transcriptional regulator	A0A0N7C2U7	Escherichia_phage	2.2e-35	100.0
QAY38890.1\|1333916_1334213_+	hypothetical protein	G9L678	Escherichia_phage	2.2e-46	94.9
QAY38891.1\|1334245_1335145_+	Replication protein O	K7P7F0	Enterobacteria_phage	3.5e-172	99.0
QAY38892.1\|1335141_1335843_+	Replication protein P	A0A0P0ZD31	Stx2-converting_phage	2.9e-129	99.6
QAY38893.1\|1335839_1336130_+	protein ren	O48423	Enterobacteria_phage	2.8e-46	97.9
QAY38894.1\|1336203_1336644_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.2e-80	100.0
QAY38895.1\|1336640_1337168_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	4.7e-100	99.4
QAY38896.1\|1337164_1337341_+	NinE family protein	A5VW90	Enterobacteria_phage	3.3e-26	96.6
QAY38897.1\|1337343_1337685_+	DUF2591 domain-containing protein	Q76H72	Enterobacteria_phage	1.6e-61	96.5
QAY38898.1\|1337677_1337872_+	protein ninF	NA	NA	NA	NA
QAY38899.1\|1337891_1338254_+	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	4.3e-60	96.5
QAY38900.1\|1338250_1338391_+	YlcG family protein	K7PHH3	Enterobacteria_phage	3.6e-07	67.4
QAY38901.1\|1338476_1338860_+	antitermination protein QuuD	A0A088CD47	Shigella_phage	1.5e-55	83.3
QAY38902.1\|1339048_1340131_-	porin OmpC	Q1MVN1	Enterobacteria_phage	1.6e-166	80.1
QAY38903.1\|1340719_1340935_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
1340444:1340457	attR	NA	NA	NA	NA
QAY38904.1\|1340934_1341432_+	lysozyme	M1FJA0	Enterobacteria_phage	5.4e-90	97.0
QAY38905.1\|1341648_1341831_+\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
QAY38906.1\|1341921_1342215_-	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	7.0e-45	92.8
QAY38907.1\|1342695_1343022_+	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
QAY38908.1\|1343144_1343498_-	hypothetical protein	NA	NA	NA	NA
QAY38909.1\|1343385_1343706_-	hypothetical protein	NA	NA	NA	NA
QAY38910.1\|1343973_1344522_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.0e-57	84.2
QAY38911.1\|1344493_1346422_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.5e-260	66.7
QAY38912.1\|1346405_1346612_+\|head	phage head-stabilizing protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
QAY38913.1\|1346608_1348201_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.9
QAY38914.1\|1348190_1349696_+	S49 family peptidase	A0A2I6TC87	Escherichia_phage	3.6e-100	53.7
QAY38915.1\|1349732_1350080_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.0e-22	58.1
QAY38916.1\|1350137_1351166_+\|capsid	minor capsid protein E	C6ZCY2	Enterobacteria_phage	5.9e-115	61.6
QAY38917.1\|1351217_1351592_+	hypothetical protein	NA	NA	NA	NA
QAY38918.1\|1351584_1351938_+\|tail	phage tail protein	A0A0K2FJB7	Enterobacteria_phage	3.4e-38	65.0
QAY38919.1\|1351949_1352528_+\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.9e-79	99.0
QAY38920.1\|1352524_1352920_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	5.5e-69	97.7
QAY38921.1\|1352927_1353668_+\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	3.7e-127	95.9
QAY38922.1\|1353683_1354106_+\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.7e-66	91.4
QAY38923.1\|1354087_1354522_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	9.0e-57	90.0
QAY38924.1\|1354514_1357076_+\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	94.5
QAY38925.1\|1357072_1357402_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	5.4e-54	94.5
QAY38926.1\|1357401_1358100_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.0e-131	97.8
QAY38927.1\|1358105_1358849_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.1e-147	97.2
QAY38928.1\|1358785_1359418_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.9e-97	100.0
QAY38929.1\|1359478_1362961_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	89.5
QAY38930.1\|1363019_1365080_+\|tail	phage tail protein	A0A0E3M194	Enterobacteria_phage	2.0e-125	53.4
QAY38931.1\|1365076_1365355_+	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	7.6e-25	56.5

DBSCAN-SWA_3

1984197 : 2078023

106

Enterobacteria_phage(25.4%)

tail,terminase,protease,holin,portal,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY39490.1\|1984197_1985079_-\|protease	protease HtpX	NA	NA	NA	NA
QAY39491.1\|1985270_1987319_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	6.8e-86	33.5
QAY39492.1\|1987338_1988037_-	RNA chaperone ProQ	NA	NA	NA	NA
QAY39493.1\|1988133_1988631_-	GAF domain-containing protein	NA	NA	NA	NA
QAY39494.1\|1988760_1990044_+	paraquat-inducible protein A	NA	NA	NA	NA
QAY39495.1\|1990012_1992646_+	PqiB family protein	NA	NA	NA	NA
QAY39496.1\|1992725_1994165_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
QAY39497.1\|1994282_1994519_+	DUF1480 family protein	NA	NA	NA	NA
QAY42271.1\|1994623_1994815_+	DUF1482 family protein	NA	NA	NA	NA
QAY39498.1\|1994815_1995472_-	protein-serine/threonine phosphatase	A0A2D1GLI5	Escherichia_phage	1.0e-56	50.5
QAY39499.1\|1995866_1996208_-	DUF2511 domain-containing protein	NA	NA	NA	NA
QAY39500.1\|1996220_1997093_-	copper resistance D family protein	NA	NA	NA	NA
QAY39501.1\|1997096_1997471_-	CopC domain-containing protein YobA	NA	NA	NA	NA
QAY39502.1\|1997609_1997840_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.3e-14	61.8
QAY39503.1\|1997942_1998599_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
QAY39504.1\|1998622_1999285_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
QAY39505.1\|2001550_2002210_-	tellurite resistance TerB family protein	NA	NA	NA	NA
QAY39506.1\|2002536_2002893_-	protein YebF	NA	NA	NA	NA
QAY39507.1\|2002959_2003250_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
QAY39508.1\|2003383_2004562_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
QAY39509.1\|2004617_2005259_-	KHG/KDPG aldolase	NA	NA	NA	NA
QAY39510.1\|2005295_2007107_-	phosphogluconate dehydratase	NA	NA	NA	NA
QAY39511.1\|2007341_2008817_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.4e-79	37.5
QAY39512.1\|2009154_2010024_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
QAY39513.1\|2010151_2011594_+	pyruvate kinase	NA	NA	NA	NA
QAY39514.1\|2011725_2012697_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
QAY39515.1\|2012815_2014138_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.2e-14	40.9
QAY39516.1\|2014153_2015086_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
QAY39517.1\|2015164_2015920_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
QAY39518.1\|2015916_2016702_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
QAY39519.1\|2016848_2017859_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
QAY39520.1\|2017867_2018479_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
QAY42272.1\|2018617_2018683_-	hypothetical protein	NA	NA	NA	NA
QAY39521.1\|2018754_2019357_+	YebB family permuted papain-like enzyme	NA	NA	NA	NA
QAY39522.1\|2019358_2019880_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
QAY39523.1\|2019914_2020655_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
QAY39524.1\|2020683_2021136_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
QAY39525.1\|2021128_2022901_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
QAY39526.1\|2023210_2023777_+	hydrolase	NA	NA	NA	NA
QAY42273.1\|2023858_2023975_-	preprotein translocase subunit SecY	NA	NA	NA	NA
QAY39527.1\|2024378_2024768_-	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	3.9e-51	72.1
QAY39528.1\|2024846_2025089_+	DinI family protein	Q6UAW0	Klebsiella_phage	2.4e-30	80.5
QAY39529.1\|2025506_2025950_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	9.2e-57	72.1
QAY39530.1\|2025921_2026515_-\|tail	tail assembly chaperone	K7P870	Enterobacteria_phage	1.7e-58	63.0
QAY39531.1\|2026514_2027447_-\|tail	tail fiber protein	K7PH60	Enterobacterial_phage	2.0e-157	91.9
QAY39532.1\|2027952_2028186_+	hypothetical protein	A0A0D4DAJ4	Escherichia_phage	1.3e-38	96.1
QAY39533.1\|2028217_2032144_-	DUF1983 domain-containing protein	K7PMC2	Enterobacterial_phage	0.0e+00	96.4
QAY39534.1\|2032186_2032804_-\|tail	tail assembly protein	M9NZA3	Enterobacteria_phage	1.5e-105	99.5
QAY39535.1\|2032796_2033516_-	peptidase P60	K7PJY5	Enterobacterial_phage	1.8e-142	99.2
QAY39536.1\|2033518_2034256_-\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	1.2e-146	99.6
QAY39537.1\|2034312_2034651_-\|tail	phage tail protein	E4WL34	Enterobacteria_phage	2.3e-60	100.0
QAY39538.1\|2034647_2037785_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	94.9
QAY39539.1\|2037768_2038083_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	8.3e-52	93.3
QAY39540.1\|2038091_2038523_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	1.1e-65	90.9
QAY39541.1\|2038533_2039277_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	1.7e-132	99.2
QAY39542.1\|2039286_2039688_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	4.1e-72	100.0
QAY39543.1\|2039684_2040263_-\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	1.7e-95	98.4
QAY39544.1\|2040272_2040548_-	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	5.9e-38	96.2
QAY39545.1\|2040540_2040867_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	3.9e-52	98.1
QAY42274.1\|2040949_2042896_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	99.1
QAY39546.1\|2042909_2044409_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	3.8e-288	99.8
QAY39547.1\|2044405_2044621_-	hypothetical protein	K7PMB5	Enterobacterial_phage	1.4e-31	98.6
QAY39548.1\|2044617_2046720_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	98.7
QAY39549.1\|2046719_2047208_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	3.1e-82	100.0
QAY39550.1\|2047237_2047417_+	hypothetical protein	NA	NA	NA	NA
QAY39551.1\|2047391_2048120_-	Fur-regulated protein	M9NZE9	Enterobacteria_phage	4.1e-118	98.3
QAY39552.1\|2048294_2048525_-	Fur-regulated protein	Q38201	Enterobacteria_phage	1.0e-38	98.7
QAY39553.1\|2048523_2049120_+	hypothetical protein	M9NZJ1	Enterobacteria_phage	9.7e-110	100.0
QAY39554.1\|2049188_2049386_-	hypothetical protein	K7PHC3	Enterobacterial_phage	2.2e-26	90.8
QAY39555.1\|2049599_2050166_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	4.5e-08	32.5
QAY42275.1\|2050099_2050642_-	lysozyme	K7PM52	Enterobacteria_phage	1.3e-100	97.2
QAY39556.1\|2050619_2050898_-\|holin	holin	K7PGZ9	Enterobacteria_phage	5.1e-45	97.8
QAY39557.1\|2051043_2052096_-	site-specific DNA-methyltransferase	Q8SBE2	Shigella_phage	7.8e-171	80.7
QAY39558.1\|2052246_2052438_-	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	3.7e-23	84.1
QAY39559.1\|2052606_2053506_-	S49 family peptidase	NA	NA	NA	NA
QAY39560.1\|2053518_2053725_-	hypothetical protein	NA	NA	NA	NA
QAY39561.1\|2054157_2054847_-	antitermination protein	NA	NA	NA	NA
QAY39562.1\|2054868_2055864_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.0e-143	69.9
QAY39563.1\|2055860_2056544_-	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	3.0e-62	60.0
QAY39564.1\|2056557_2056944_-	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	4.1e-61	88.4
QAY42276.1\|2056940_2058257_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	3.6e-117	52.3
QAY39565.1\|2058256_2059138_-	GntR family transcriptional regulator	U5P0A0	Shigella_phage	6.0e-31	84.1
QAY39566.1\|2059127_2059307_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.3e-13	65.4
QAY39567.1\|2059482_2060046_-	hypothetical protein	S5FXP0	Shigella_phage	1.1e-06	27.1
QAY39568.1\|2060077_2060335_-	hypothetical protein	H6WRX5	Salmonella_phage	3.5e-08	41.1
QAY39569.1\|2060404_2061124_+	XRE family transcriptional regulator	S5FUZ3	Shigella_phage	1.8e-25	34.7
QAY39570.1\|2061368_2061734_+\|protease	Clp protease	A0A1C9IHZ4	Salmonella_phage	9.7e-12	51.6
QAY39571.1\|2062076_2062994_+	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	1.7e-105	64.0
QAY39572.1\|2063102_2063642_+	HD family hydrolase	A0A192Y8M4	Salmonella_phage	2.7e-66	69.8
QAY39573.1\|2063802_2064057_+	hypothetical protein	NA	NA	NA	NA
QAY39574.1\|2064053_2064401_+	hypothetical protein	A0A2H4A316	Salmonella_phage	3.5e-11	65.5
QAY39575.1\|2064402_2064711_+	hypothetical protein	NA	NA	NA	NA
QAY39576.1\|2064724_2065192_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	9.5e-44	84.7
QAY39577.1\|2065194_2065449_+	DUF4222 domain-containing protein	H6WZF9	Escherichia_phage	4.1e-17	54.4
QAY39578.1\|2065470_2066040_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.1e-91	82.4
QAY39579.1\|2066080_2066317_+	excisionase	Q8W657	Enterobacteria_phage	4.6e-39	89.7
QAY39580.1\|2066375_2067689_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	4.3e-235	89.9
QAY39581.1\|2067667_2068441_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.1e-72	99.2
QAY39582.1\|2068493_2068889_+	hypothetical protein	NA	NA	NA	NA
QAY39583.1\|2068929_2069673_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.6e-24	30.0
QAY39584.1\|2069669_2070641_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
QAY39585.1\|2070805_2073235_-	Trimethylamine-N-oxide reductase 2	NA	NA	NA	NA
QAY39586.1\|2073259_2074360_-	cytochrome C	NA	NA	NA	NA
QAY39587.1\|2074747_2075494_-	copper homeostasis protein CutC	NA	NA	NA	NA
QAY39588.1\|2075507_2076074_-	VOC family protein	NA	NA	NA	NA
QAY39589.1\|2076289_2078023_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	8.8e-87	33.7

DBSCAN-SWA_4

2458094 : 2467539

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY39891.1\|2458094_2459231_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.8e-163	97.7
QAY39892.1\|2459227_2461231_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.1
QAY42295.1\|2461355_2461817_+	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	3.2e-76	99.3
QAY39893.1\|2461857_2462328_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
QAY39894.1\|2462374_2463094_-	two-component system response regulator BtsR	NA	NA	NA	NA
QAY39895.1\|2463090_2464776_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
QAY39896.1\|2464997_2465729_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.2e-111	99.0
QAY39897.1\|2465788_2465896_+	protein YohO	NA	NA	NA	NA
QAY39898.1\|2465876_2466608_-	ABC transporter permease	NA	NA	NA	NA
QAY39899.1\|2466612_2467539_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.6e-08	27.3

DBSCAN-SWA_5

2715633 : 2728590

Escherichia_phage(83.33%)

integrase

attL 2721166:2721179|attR 2729635:2729648

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY40119.1\|2715633_2716566_+	hypothetical protein	E7DYY8	Enterobacteria_phage	4.6e-167	99.0
QAY40120.1\|2717153_2717684_-	OmpH family outer membrane protein	A0A2L1IV11	Escherichia_phage	5.1e-86	99.4
QAY40121.1\|2717731_2725681_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV38	Escherichia_phage	0.0e+00	99.3
2721166:2721179	attL	NA	NA	NA	NA
QAY40122.1\|2725705_2726326_-	LuxR family transcriptional regulator	A0A2L1IV08	Escherichia_phage	5.9e-118	99.0
QAY40123.1\|2726643_2727273_-	pilus assembly protein	A0A2L1IV36	Escherichia_phage	1.6e-118	99.0
QAY40124.1\|2728020_2728590_+\|integrase	integrase	A0A2L1IV36	Escherichia_phage	7.0e-49	52.2
2729635:2729648	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3059501 : 3066641

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY40417.1\|3059501_3062063_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.6e-31	20.8
QAY40418.1\|3062168_3062825_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	2.8e-49	45.2
QAY40419.1\|3062875_3063643_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.2e-69	57.4
QAY40420.1\|3063838_3064747_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.9
QAY40421.1\|3064743_3066006_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.2e-135	61.4
QAY40422.1\|3066002_3066641_+	aldolase	A0A077SK32	Escherichia_phage	2.8e-83	75.0

DBSCAN-SWA_7

3298063 : 3357078

Escherichia_phage(33.33%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY40615.1\|3298063_3298822_+\|protease	metalloprotease	NA	NA	NA	NA
QAY40616.1\|3299025_3299946_-	agmatinase	NA	NA	NA	NA
QAY40617.1\|3300081_3300813_-	hypothetical protein	NA	NA	NA	NA
QAY40618.1\|3300958_3302935_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA
QAY40619.1\|3302943_3303075_-	acid stress response protein YqgB	NA	NA	NA	NA
QAY40620.1\|3303210_3303426_+	hypothetical protein	NA	NA	NA	NA
QAY40621.1\|3303422_3303674_-	DUF2684 family protein	NA	NA	NA	NA
QAY40622.1\|3303729_3304884_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.0e-128	63.2
QAY40623.1\|3305319_3306714_+	sugar porter family MFS transporter	NA	NA	NA	NA
QAY40624.1\|3306790_3307288_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
QAY40625.1\|3307382_3308090_+	deoxyribonuclease I	NA	NA	NA	NA
QAY40626.1\|3308169_3308901_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
QAY40627.1\|3308913_3309864_+	glutathione synthase	NA	NA	NA	NA
QAY40628.1\|3309972_3310536_+	YqgE/AlgH family protein	NA	NA	NA	NA
QAY40629.1\|3310535_3310952_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
QAY40630.1\|3311125_3312106_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
QAY40631.1\|3312123_3312828_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
QAY40632.1\|3312845_3313412_+	YggT family protein	NA	NA	NA	NA
QAY40633.1\|3313408_3313699_+	YggU family protein	NA	NA	NA	NA
QAY40634.1\|3313706_3314300_+	XTP/dITP diphosphatase	NA	NA	NA	NA
QAY40635.1\|3314292_3315429_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA
QAY40636.1\|3315497_3316505_-	DUF1202 family protein	NA	NA	NA	NA
QAY40637.1\|3316621_3317668_-	L-asparaginase 2	NA	NA	NA	NA
QAY40638.1\|3317843_3318563_-	DUF2884 family protein	NA	NA	NA	NA
QAY40639.1\|3318746_3319073_-	DUF469 domain-containing protein	NA	NA	NA	NA
QAY40640.1\|3319072_3319792_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
QAY40641.1\|3319952_3321005_+	adenine DNA glycosylase	NA	NA	NA	NA
QAY40642.1\|3321032_3321308_+	oxidative damage protection protein	NA	NA	NA	NA
QAY42320.1\|3321372_3322452_+	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
QAY40643.1\|3322653_3323910_+	nucleoside permease	NA	NA	NA	NA
QAY40644.1\|3323958_3326094_-	ornithine decarboxylase	NA	NA	NA	NA
QAY40645.1\|3326492_3327200_+	DUF554 domain-containing protein	NA	NA	NA	NA
QAY40646.1\|3327578_3328844_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	2.1e-77	38.1
QAY40647.1\|3329099_3330143_+	tetratricopeptide repeat protein	NA	NA	NA	NA
QAY40648.1\|3330285_3330516_+	hypothetical protein	NA	NA	NA	NA
QAY40649.1\|3331835_3332387_-	MarR family transcriptional regulator	NA	NA	NA	NA
QAY40650.1\|3334878_3335112_+	pilus assembly protein	NA	NA	NA	NA
QAY40651.1\|3335177_3335465_+	hypothetical protein	NA	NA	NA	NA
QAY42321.1\|3335578_3335794_+	hypothetical protein	A0A0N7C1Y0	Escherichia_phage	1.1e-26	83.6
QAY40652.1\|3335762_3336889_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.5e-146	96.6
QAY42322.1\|3336979_3337093_-	hypothetical protein	NA	NA	NA	NA
QAY40653.1\|3338615_3338930_+	hypothetical protein	NA	NA	NA	NA
QAY40654.1\|3338926_3339187_+	DUF1471 domain-containing protein	NA	NA	NA	NA
QAY40655.1\|3339228_3339789_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAY40656.1\|3339828_3340257_+	DUF417 family protein	NA	NA	NA	NA
QAY40657.1\|3340965_3342193_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	95.3
QAY40658.1\|3342168_3342357_+	hypothetical protein	NA	NA	NA	NA
QAY40659.1\|3342306_3343500_-	MFS transporter	NA	NA	NA	NA
QAY40660.1\|3343635_3345360_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
QAY40661.1\|3345360_3346308_+	N-acetyltransferase	NA	NA	NA	NA
QAY40662.1\|3346307_3348050_+	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
QAY40663.1\|3348046_3349324_+	L-lysine N6-monooxygenase	NA	NA	NA	NA
QAY40664.1\|3349405_3351607_+	TonB-dependent receptor	NA	NA	NA	NA
QAY40665.1\|3351544_3351790_-	hypothetical protein	NA	NA	NA	NA
QAY40666.1\|3352550_3356438_+\|protease	serine protease autotransporter toxin Sat	Q9LA58	Enterobacterial_phage	1.2e-227	39.0
QAY40667.1\|3356709_3357078_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

4926180 : 4932739

Rhizobium_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAY42058.1\|4926180_4927005_+	hypothetical protein	L7TR00	Rhizobium_phage	3.0e-16	35.5
QAY42059.1\|4927053_4927626_-	hypothetical protein	Q858R9	Enterobacteria_phage	2.2e-71	69.0
QAY42060.1\|4927726_4928077_+\|transposase	transposase	Q716C1	Shigella_phage	8.9e-39	97.7
QAY42061.1\|4927996_4929148_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.6e-42	36.0
QAY42062.1\|4930199_4930457_+	hypothetical protein	NA	NA	NA	NA
QAY42063.1\|4931014_4931782_-	Fe(3+) dicitrate transport ATP-binding protein FecE	G3M9Y6	Bacillus_virus	6.4e-13	24.8
QAY42064.1\|4931782_4932739_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	A0A2H4IY97	uncultured_Caudovirales_phage	1.1e-17	26.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP035486

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection