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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032487 Yersinia sp. CFS1934 chromosome, complete genome 1 crisprs DEDDh,WYL,cas3,DinG,csa3,RT 0 0 13 0
CP032488 Yersinia sp. CFS1934 plasmid pCFS1934, complete sequence 0 crisprs RT,csa3 0 0 0 0

Results visualization

1. CP032487
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032487_1 3885586-3885673 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 680199 : 761662 84 Enterobacteria_phage(16.0%) tRNA,protease,terminase,tail,holin,portal NA
DBSCAN-SWA_2 842770 : 885869 57 Pseudomonas_phage(36.84%) transposase,plate,head,tail NA
DBSCAN-SWA_3 1509748 : 1553465 61 Pectobacterium_phage(68.89%) tRNA,integrase,plate,terminase,head,tail attL 1502248:1502262|attR 1526307:1526321
DBSCAN-SWA_4 1558029 : 1607259 46 Escherichia_phage(66.67%) protease,transposase,coat NA
DBSCAN-SWA_5 1642281 : 1650086 8 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_6 2173796 : 2208011 46 Erwinia_phage(45.71%) capsid,transposase,lysis,integrase,terminase,plate,head,tail,holin,portal attL 2171984:2171998|attR 2183729:2183743
DBSCAN-SWA_7 2297956 : 2310019 7 Paramecium_bursaria_Chlorella_virus(16.67%) NA NA
DBSCAN-SWA_8 2803727 : 2811380 9 Salmonella_phage(33.33%) transposase,integrase attL 2794877:2794891|attR 2810526:2810540
DBSCAN-SWA_9 3021085 : 3028646 12 Salmonella_phage(30.0%) transposase NA
DBSCAN-SWA_10 3247066 : 3255696 10 Escherichia_phage(71.43%) NA NA
DBSCAN-SWA_11 3480261 : 3537041 45 Escherichia_phage(20.0%) tRNA,transposase,plate NA
DBSCAN-SWA_12 3901067 : 3959552 49 Escherichia_phage(66.67%) transposase,plate NA
DBSCAN-SWA_13 4617384 : 4625190 10 Enterobacteria_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage