CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP033356	Salmonella enterica subsp. enterica strain CFSA664 chromosome, complete genome	2 crisprs	PD-DExK,DEDDh,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG	23	11
CP033354	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-2, complete sequence	0 crisprs	NA	0	0
CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	0 crisprs	csa3	0	3
CP033355	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-3, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP033356_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033356_2

961059-962125

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

17 spacers

cas3,cas8e,cse2gr11

The CRISPR arrays of CP033356_2

>merge|CP033356|2|961059-962125|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGTAACCACTGCGATATGGGCGATGACACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGAAGCGCAGCAGAACGCCCGGTCGCAGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGATCACCGGCACGCGCGATAACGGGTCTGATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAAAATTACCGGGCAGTCACCGTGGGGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGACGATCCAGATATTTGGCTGGATGCAATCGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCATCGGTAACCTCTCACTATCGGTGTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTTTATGTCTGGTGGATATAACGCACTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAACAGGTAAATTTGTTCGCTTCGTCAAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTATCCCGAAATCACGTTCAAGAAAAATCCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTTGATCAGAACGGCAACGAACGCACGTACGTGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCGTAGGTTGTTGACGTCCCCACCAGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATTTTTGATCATCTCCTCCAGCCTGCTGAGGTGTTCCCCGCGCTAGCGGGGATAAACCGCACTGGAGATATAGCTGCTGTCGTCATCGGGTGTGTTCCCCGCGCTAGCGGGGATAAACCAGTCAAATAAATATGAGTGAAGAAGCCAAAGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATAAGAGCATCCCCGCCATCCGGAGGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGGACATTCTCGCTAGTCACGGTCATGTCATGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGCCAACGACTGGAATTTTTGCGTGTAGCCGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP033356|2|1|961059-962063|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGTAACCACTGCGATATGGGCGATGACACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGGAAGCGCAGCAGAACGCCCGGTCGCAGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATCACCGGCACGCGCGATAACGGGTCTGATTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGAAAATTACCGGGCAGTCACCGTGGGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGATCCAGATATTTGGCTGGATGCAATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCCCATCGGTAACCTCTCACTATCGGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCTTTTATGTCTGGTGGATATAACGCACTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAACAGGTAAATTTGTTCGCTTCGTCAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGTATCCCGAAATCACGTTCAAGAAAAATCCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCGTTGATCAGAACGGCAACGAACGCACGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCAGCGTAGGTTGTTGACGTCCCCACCAGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACC	GCACTGGAGATATAGCTGCTGTCGTCATCGGGT
GTGTTCCCCGCGCTAGCGGGGATAAACC	AGTCAAATAAATATGAGTGAAGAAGCCAAAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACC

>CP033356|2|2|961059-962125|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTAACCACTGCGATATGGGCGATGACACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGAAGCGCAGCAGAACGCCCGGTCGCAGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACCGGCACGCGCGATAACGGGTCTGATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAAAATTACCGGGCAGTCACCGTGGGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGATCCAGATATTTGGCTGGATGCAATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCATCGGTAACCTCTCACTATCGGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTTATGTCTGGTGGATATAACGCACTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAACAGGTAAATTTGTTCGCTTCGTCAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATCCCGAAATCACGTTCAAGAAAAATCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTTGATCAGAACGGCAACGAACGCACGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGACGTCCCCACCAGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACTGGAGATATAGCTGCTGTCGTCATCGGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCA	GTCAAATAAATATGAGTGAAGAAGCCAAAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP033356|2|1|961059-962125|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTAACCACTGCGATATGGGCGATGACACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGAAGCGCAGCAGAACGCCCGGTCGCAGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATCACCGGCACGCGCGATAACGGGTCTGATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAAAATTACCGGGCAGTCACCGTGGGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGATCCAGATATTTGGCTGGATGCAATCGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCATCGGTAACCTCTCACTATCGGTGTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTTATGTCTGGTGGATATAACGCACTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAACAGGTAAATTTGTTCGCTTCGTCAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTATCCCGAAATCACGTTCAAGAAAAATCCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTTGATCAGAACGGCAACGAACGCACGTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCGTAGGTTGTTGACGTCCCCACCAGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATTTTTGATCATCTCCTCCAGCCTGCTGAG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	CACTGGAGATATAGCTGCTGTCGTCATCGGGT
GTGTTCCCCGCGCTAGCGGGGATAAACCA	GTCAAATAAATATGAGTGAAGAAGCCAAAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATAAGAGCATCCCCGCCATCCGGAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGGACATTCTCGCTAGTCACGGTCATGTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP033356.1\|QAX35185.1\|963107_963470_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP033356.1\|QAX35190.1\|972693_974229_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP033356.1\|QAX35183.1\|960090_960762_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP033356.1\|QAX38660.1\|968302_969256_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP033356.1\|QAX35187.1\|965692_967405_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP033356.1\|QAX35184.1\|962222_963020_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP033356.1\|QAX35175.1\|950135_950606_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP033356.1\|QAX35191.1\|974245_974848_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP033356.1\|QAX35176.1\|950620_951127_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP033356.1\|QAX35189.1\|969636_972336_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP033356.1\|QAX35188.1\|967480_968215_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP033356.1\|QAX35178.1\|951932_954632_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP033356.1\|QAX35181.1\|956936_958574_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP033356.1\|QAX35180.1\|955908_956709_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP033356.1\|QAX35186.1\|963893_965693_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP033356.1\|QAX35182.1\|958656_959955_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP033356.1\|QAX35179.1\|954711_955299_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP033356.1\|QAX35174.1\|949602_950139_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP033356.1\|QAX35177.1\|951146_951920_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP033356.1\|QAX38659.1\|963398_963569_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP033356.1\|QAX35185.1\|963107_963470_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP033356.1\|QAX35190.1\|972693_974229_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP033356.1\|QAX35183.1\|960090_960762_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	5.23698e-155
CP033356.1\|QAX38660.1\|968302_969256_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP033356.1\|QAX35187.1\|965692_967405_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP033356.1\|QAX35184.1\|962222_963020_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	7.9973e-103
CP033356.1\|QAX35175.1\|950135_950606_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.80714e-98
CP033356.1\|QAX35176.1\|950620_951127_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	9.68477e-105
CP033356.1\|QAX35189.1\|969636_972336_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	7.41652e-143
CP033356.1\|QAX35191.1\|974245_974848_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.07044e-37
CP033356.1\|QAX35178.1\|951932_954632_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP033356.1\|QAX35181.1\|956936_958574_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP033356.1\|QAX35180.1\|955908_956709_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP033356.1\|QAX35186.1\|963893_965693_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP033356.1\|QAX35182.1\|958656_959955_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP033356.1\|QAX35179.1\|954711_955299_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP033356.1\|QAX35174.1\|949602_950139_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.12658e-120
CP033356.1\|QAX35177.1\|951146_951920_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP033356.1\|QAX35188.1\|967480_968215_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.20028e-139

>CP033356.1|QAX35183.1|960090_960762_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLYSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP033356.1|QAX35182.1|958656_959955_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP033356.1|QAX35181.1|956936_958574_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP033356.1|QAX35180.1|955908_956709_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP033356.1|QAX35179.1|954711_955299_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP033356.1|QAX35178.1|951932_954632_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSASPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDESTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKAAPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP033356.1|QAX35177.1|951146_951920_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP033356.1|QAX35176.1|950620_951127_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDVSQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP033356.1|QAX35175.1|950135_950606_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTNVPGLGIELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP033356.1|QAX35174.1|949602_950139_-|fimbrial-protein-SteF
MNRIFQTTGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALESSSIANGFAIGIETADQHPLIINASQGTEFMLAEGNTIINLQAWLQKTSGENIMPGEFNASAMVNFEYQ
>CP033356.1|QAX35184.1|962222_963020_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP033356.1|QAX35185.1|963107_963470_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP033356.1|QAX38659.1|963398_963569_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP033356.1|QAX35186.1|963893_965693_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARTGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGSEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGAMDIEAADEFLSELRVERRYQRDVY
>CP033356.1|QAX35187.1|965692_967405_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKRESNFLRGTIAEDLNDGLTGGFHGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGFLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRMGTRIPRMYRENITESEILDSVDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP033356.1|QAX35188.1|967480_968215_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP033356.1|QAX38660.1|968302_969256_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP033356.1|QAX35189.1|969636_972336_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGTNAENWIVWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLIVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKVLLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPQQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKHFGLVG
>CP033356.1|QAX35190.1|972693_974229_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNIVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>CP033356.1|QAX35191.1|974245_974848_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK

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Crispr_ID: CP033356_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP033356_3

978666-979731

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

17 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP033356_3

>merge|CP033356|3|978666-979731|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCACACATTGTGTGACGGTCGCCGTCTGGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGTTGTCCTTGTAATGGGGGGGGGCATTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGACGGGTTCGTCCGACCGCATCCGGGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTGGAACCATAAAAGATGGGCAAATAGTGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTATTAGCGACTATCCAGGAATAAATTACGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTGTTACTGATGGTGGGGCGCTGGATGAGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCGCGTCAGGAACGTTTCTGGGGTGGCCTGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGTCCACACTGCGGCGCTGAAAAATGCAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGTTTGATCTCCACTCACAACGGTATTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGGAGTCCGGATCATCATTCAGGATAACGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCGCGCGGCGATCGACTCAAGGCGGCGACGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATCGTGAGTGACTATCGTTCTGTTATTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCTGTGATTACCCCGGAGCATGGCGGTGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCGGGGAAACAAGGAAAGTCCTGGTTTTTGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTGAAATCGCTATTCTTATTGCTGTAGCAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTAACTAAAACGAACAAAACAGGGAAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAGACAACTCCTGTCTTTCCATCACTCGAAGCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP033356|3|2|978666-979731|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACACATTGTGTGACGGTCGCCGTCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTGTCCTTGTAATGGGGGGGGGCATTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGACGGGTTCGTCCGACCGCATCCGGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGGAACCATAAAAGATGGGCAAATAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTATTAGCGACTATCCAGGAATAAATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGTTACTGATGGTGGGGCGCTGGATGAGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGTCAGGAACGTTTCTGGGGTGGCCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGTCCACACTGCGGCGCTGAAAAATGCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGTTTGATCTCCACTCACAACGGTATTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGGAGTCCGGATCATCATTCAGGATAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGCGCGGCGATCGACTCAAGGCGGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCGTGAGTGACTATCGTTCTGTTATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCTGTGATTACCCCGGAGCATGGCGGTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGGGAAACAAGGAAAGTCCTGGTTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGAAATCGCTATTCTTATTGCTGTAGCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAACTAAAACGAACAAAACAGGGAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAGACAACTCCTGTCTTTCCATCACTCGAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP033356|3|3|978666-979731|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACACATTGTGTGACGGTCGCCGTCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTGTCCTTGTAATGGGGGGGGGCATTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGACGGGTTCGTCCGACCGCATCCGGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGGAACCATAAAAGATGGGCAAATAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTATTAGCGACTATCCAGGAATAAATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGTTACTGATGGTGGGGCGCTGGATGAGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGTCAGGAACGTTTCTGGGGTGGCCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGTCCACACTGCGGCGCTGAAAAATGCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGTTTGATCTCCACTCACAACGGTATTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGGAGTCCGGATCATCATTCAGGATAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGCGCGGCGATCGACTCAAGGCGGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCGTGAGTGACTATCGTTCTGTTATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCTGTGATTACCCCGGAGCATGGCGGTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGGGAAACAAGGAAAGTCCTGGTTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGAAATCGCTATTCTTATTGCTGTAGCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAACTAAAACGAACAAAACAGGGAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAGACAACTCCTGTCTTTCCATCACTCGAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>CP033356|3|2|978666-979731|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCACACATTGTGTGACGGTCGCCGTCTGGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGTTGTCCTTGTAATGGGGGGGGGCATTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGACGGGTTCGTCCGACCGCATCCGGGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTGGAACCATAAAAGATGGGCAAATAGTGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTATTAGCGACTATCCAGGAATAAATTAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTGTTACTGATGGTGGGGCGCTGGATGAGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGTCAGGAACGTTTCTGGGGTGGCCTGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTGTCCACACTGCGGCGCTGAAAAATGCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGTTTGATCTCCACTCACAACGGTATTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGGAGTCCGGATCATCATTCAGGATAACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATCGCGCGGCGATCGACTCAAGGCGGCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCGTGAGTGACTATCGTTCTGTTATTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCTGTGATTACCCCGGAGCATGGCGGTGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCGGGGAAACAAGGAAAGTCCTGGTTTTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTGAAATCGCTATTCTTATTGCTGTAGCAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTAACTAAAACGAACAAAACAGGGAAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAGACAACTCCTGTCTTTCCATCACTCGAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP033356.1\|QAX35199.1\|981960_983400_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP033356.1\|QAX35204.1\|985596_986076_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP033356.1\|QAX38660.1\|968302_969256_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP033356.1\|QAX35205.1\|986072_987122_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP033356.1\|QAX35192.1\|974864_975929_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
CP033356.1\|QAX35198.1\|981042_981951_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP033356.1\|QAX35201.1\|984009_984366_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP033356.1\|QAX35196.1\|978287_978581_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP033356.1\|QAX35197.1\|979745_980792_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP033356.1\|QAX35189.1\|969636_972336_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
CP033356.1\|QAX35191.1\|974245_974848_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|274193
CP033356.1\|QAX35194.1\|976663_977368_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|187795
CP033356.1\|QAX35202.1\|984556_984868_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP033356.1\|QAX35193.1\|975938_976664_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP033356.1\|QAX35190.1\|972693_974229_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP033356.1\|QAX35195.1\|977367_978285_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP033356.1\|QAX35200.1\|983386_983992_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP033356.1\|QAX35206.1\|987102_987864_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP033356.1\|QAX35188.1\|967480_968215_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP033356.1\|QAX35203.1\|984886_985597_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670

Protein	Function_ID	Function_description	E-value
CP033356.1\|QAX35199.1\|981960_983400_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP033356.1\|QAX35204.1\|985596_986076_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP033356.1\|QAX38660.1\|968302_969256_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP033356.1\|QAX35205.1\|986072_987122_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP033356.1\|QAX35192.1\|974864_975929_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.21194e-121
CP033356.1\|QAX35198.1\|981042_981951_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP033356.1\|QAX35201.1\|984009_984366_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP033356.1\|QAX35196.1\|978287_978581_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	7.65966e-64
CP033356.1\|QAX35197.1\|979745_980792_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP033356.1\|QAX35189.1\|969636_972336_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	7.41652e-143
CP033356.1\|QAX35191.1\|974245_974848_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.07044e-37
CP033356.1\|QAX35194.1\|976663_977368_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187795	cd09664, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	6.33841e-89
CP033356.1\|QAX35202.1\|984556_984868_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP033356.1\|QAX35193.1\|975938_976664_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.42656e-47
CP033356.1\|QAX35190.1\|972693_974229_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP033356.1\|QAX35195.1\|977367_978285_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.03247e-157
CP033356.1\|QAX35200.1\|983386_983992_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	3.2499e-145
CP033356.1\|QAX35206.1\|987102_987864_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP033356.1\|QAX35188.1\|967480_968215_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.20028e-139
CP033356.1\|QAX35203.1\|984886_985597_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119

>CP033356.1|QAX35196.1|978287_978581_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAVWLLEIRAGVYVGDVSTKIREMIWQQVSVLADEGNVVMAWATNTESSFEFQTFGVNRRIPVDLDGLRLVSFLPVENQ
>CP033356.1|QAX35195.1|977367_978285_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MSWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVRLAATVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPSRRSVDQLRGIEGSRVRATYALLAKQYGVKWQGRRYDPKDWEKGDVINQCISSATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFETVVPKAFEIARRNPAEPDRDVRIACRDIFRSGKTLAKLIPLIEDVLAAGEIQPPLPPEDSQPIAIPLPVALGDSGHRST
>CP033356.1|QAX35194.1|976663_977368_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRIQLRFNNLRPEMLAKWNSARPYASHQWLWQLFPEQELRQFLFREEAHGGFFMLSAIPPLLQHSLFLIETKPFNPQLTNGLELDFQLRANPVITRNGKRSDVMMNAKHQAKANGVEKERWWELQQQAAQAWLEQQGQQHGFRLIAPEPDDFAMWAGDEYSELQAHCGCVQAYQQHRFVRKDQQKPITFSSVDFNGALCITDAALFKQALFSGLGKSKALGCGMLMVKRKR
>CP033356.1|QAX35193.1|975938_976664_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MKEYLVFQLYAPLASWGEEASGEIRHSATVPTRSALLGLLAAALGIRRDEEARLNNFNRHYHLAVHALASQDRWLRDYHTVGAPRENKKYRYYTRRDELTLAPDEVGTLISQREYRCDGYWHVAISATPDAPHSLSELREALLTPHFPLYLGRKSCPLALPLAARLMTGTLKEVFTHAVEEISAAELSGFTLREGICYWDDPDEESLVWQQKQHSNNQPVSRQRWQFGGYTRFNGPLQERT
>CP033356.1|QAX35192.1|974864_975929_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MIMTTFIQLHLLTAYAPANLNRDESGRPKTAFMGGVERLRVSSQSLKRAWRVSETFEAALDGFMGKRTRRIGVDYVYRPMKDAGIEEKIAKSSSELIAKQFGKLKSDKDAKPEKNLEIEQIVHVSNHEISLIKQLVDTLIADKREPNDEEVKLLRKEQRSVDMALFGRMLASSPEFNVEAACQVSHALGVSAVTVESDFFTAVDDLNNKEEDAGSGHMGEQGFASALFYTYVCISRDLLVENLGGNEELAKRTIAALTETALTVSPTGKQNSFASRAYATYALAEVGQKQPRSLAAAFFQPVRDTDQIPAAITRLKQQRASFDSVYGNCADDYRELNVQEGTGSLAELLAFVSQ
>CP033356.1|QAX35191.1|974245_974848_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MLNSNTAVLCRILHPDAQKALLDWFATLSERYERKDGKRVNGRAWRAELKRMAPPYGVMICEGHDALRQALLKHMRLQPLDEMALALFVSVAVHIKSHKANISFAAQLGEKLKGSTSCVSGLRFERLQKASDPETFCQLLIQAVKIRGTEGVNVLSLADGIFLWMEEWQRRENHQPEFRNPFERNRIRWANEYLSTSRGK
>CP033356.1|QAX35190.1|972693_974229_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLTKEKWLPVIFSNGDKKKISLRDLLDNRIQDLAYPRADFQGAAWQMLIGILQCTVAPEDKEEWADIWHESIEFEQWEKALNTISLALQFGEQKPSFLQSFDPLDSEYGSIAGLLVDAPGGNALKLNKDHFVKRGNVEQICPHCAAIALFAIQTNSPAGGAGYRVGMRGGGPLTTLVVPQEEDKYPLWKKLWLNVLPQEEPPNVTQHPLIFPWLAPTKTSEKAGNVVTPDNAHPLQAYWGMPRRIELDFTHTVAGICDLCGEHHESLLLQMRSKNYGVQYDSWLHPFSPYRQALKDPSAPWLAFKGQPGGLSYKDWLGLMLNREDKFNKMQPAKVVRAAGQRNKMSLWCFAWDMDKAKVRCWYQHRIPLISVSHEEQFLAALNIVLVLASESLSLLRNALKSAKFDCPKEAKMDFSMVDIAFWQETEPAFRTLQEALAVDPLRQDTQTRHAVSQWEAELAHYLFHVFDRDALTNPDCPDDILQRQLTARQDLASSYRKHKARKDVLALVE
>CP033356.1|QAX35189.1|969636_972336_-|CRISPR-associated-helicase/endonuclease-Cas3
MTQIEYLDYLCYWGKTDKSTKNIICNYHLLAYHCLDVAACGKYIIKNNIFNSCNILKECNISGTNAENWIVWFLASHDIGKFARGFQKYAEFPDSPLVSPVSGVSAFERHDSLGFYLWGKLFEAWSSGSNEIIAGIEPENRARFESALNSWMLISTGHHGIPPDTMKNRSSLAFTDEDIVAATHYLEALSELFPFTLPQEWKTKAGRKCLKQHSWFFAGLVTLADWMGSDESQFPLLSSAMPLKDYWPLACEKAQQAILRMPPLSQHSHYQDHRALFPFIQTLTPLQQRASELDISAPGAQLIVLEDVTGAGKTEAALILTHRLMSANKGHGLYVGLPTMATANAMYQRLASAYHALFTDESRPSLILAHGGREMSDSFRQSIWQPTENIAEDYARDDGNATTECHTWFADSRKKALLAEVGVGTLDQLLMAVMPFRHQSLRLLGMRDKVLLLDEVHAYDGYMVKLLEGLLRFHAAQGGSAIILSATLPAALREKLLNAFSDGAGFMSAGGSDNAGYPWLSHLTSSGLLEQPLATRPEVQRTVAVNWIQQRQEALDIIYRVVATGQCICWIRNTVDDALDTYQQLLHEGIVPQQDLLLFHSRFAFIDRIAIENKTLNWFGNNAPVSERRGKVLIATQVVEQSLDLDFDWMITDLAPIDLLIQRAGRLQRHIRDAHGQRKSTLPDERQPPVLHILAPHWQEQAEEGWLGQELKGTGFVYADHACLWRTQALLRQHGEIRMPDNARALVDGVYEQKIAAPAGLQTISDVAFGKVLSQRSVAAQNLLRYDLGYDREASDFLWDKDREFSTRLGEESVDVYLARKDIDGQLRPLVDEIDFCWEKSRLSVRKSWWQKNSGTFQCPDEETLACFRKRHHRPSGQVVLVSDAGEASYYSKHFGLVG
>CP033356.1|QAX38660.1|968302_969256_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP033356.1|QAX35188.1|967480_968215_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP033356.1|QAX35197.1|979745_980792_-|aminopeptidase
MFSATRRFAIILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP033356.1|QAX35198.1|981042_981951_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP033356.1|QAX35199.1|981960_983400_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIASEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP033356.1|QAX35200.1|983386_983992_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHHRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP033356.1|QAX35201.1|984009_984366_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP033356.1|QAX35202.1|984556_984868_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP033356.1|QAX35203.1|984886_985597_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP033356.1|QAX35204.1|985596_986076_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP033356.1|QAX35205.1|986072_987122_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP033356.1|QAX35206.1|987102_987864_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP033356_3	3.8\|979122\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979122-979153	32	NZ_CP026270	Klebsiella oxytoca strain KONIH4 plasmid unnamed, complete sequence	39148-39179	1	0.969
CP033356_3	3.1\|978695\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	978695-978726	32	CP051275	Salmonella phage SW-37, complete genome	23580-23611	2	0.938
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	MT374854	Yersinia phage vB_YpM_6, complete genome	10937-10968	3	0.906
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	MT374853	Yersinia phage vB_YpM_5, complete genome	12313-12344	3	0.906
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	AF083977	Bacteriophage Mu, complete genome	7597-7628	3	0.906
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	M64097	Bacteriophage Mu left end	7595-7626	3	0.906
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	NC_000929	Enterobacteria phage Mu, complete genome	7597-7628	3	0.906
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	MT374854	Yersinia phage vB_YpM_6, complete genome	10936-10968	4	0.879
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	MT374853	Yersinia phage vB_YpM_5, complete genome	12312-12344	4	0.879
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	AF083977	Bacteriophage Mu, complete genome	7596-7628	4	0.879
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	M64097	Bacteriophage Mu left end	7594-7626	4	0.879
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	NC_000929	Enterobacteria phage Mu, complete genome	7596-7628	4	0.879
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	NC_013594	Escherichia phage D108, complete genome	7557-7588	4	0.875
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	KP010268	Enterobacteria phage SfMu, complete genome	8083-8114	4	0.875
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	LR595867	Escherichia virus Mu_3F6 genome assembly, chromosome: 1	7716-7747	4	0.875
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	MT374852	Yersinia phage vB_YpM_3, complete genome	7747-7778	4	0.875
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	MT374856	Yersinia phage vB_YpM_23, complete genome	11649-11680	4	0.875
CP033356_2	2.17\|961088\|32\|CP033356\|CRISPRCasFinder,CRT	961088-961119	32	MT591577	Yersinia phage vB_YpM_Tongde, complete genome	29404-29435	4	0.875
CP033356_4	4.1\|3571409\|27\|CP033356\|CRISPRCasFinder	3571409-3571435	27	AP013473	Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C82-MedDCM-OCT-S28-C40	22555-22581	4	0.852
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	MT591577	Yersinia phage vB_YpM_Tongde, complete genome	29404-29436	5	0.848
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	NC_013594	Escherichia phage D108, complete genome	7556-7588	5	0.848
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	KP010268	Enterobacteria phage SfMu, complete genome	8082-8114	5	0.848
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	LR595867	Escherichia virus Mu_3F6 genome assembly, chromosome: 1	7715-7747	5	0.848
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	MT374852	Yersinia phage vB_YpM_3, complete genome	7746-7778	5	0.848
CP033356_2	2.1\|961087\|33\|CP033356\|PILER-CR	961087-961119	33	MT374856	Yersinia phage vB_YpM_23, complete genome	11648-11680	5	0.848
CP033356_2	2.2\|961148\|33\|CP033356\|PILER-CR	961148-961180	33	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	119594-119626	5	0.848
CP033356_2	2.18\|961149\|32\|CP033356\|CRISPRCasFinder,CRT	961149-961180	32	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	119595-119626	5	0.844
CP033356_4	4.1\|3571409\|27\|CP033356\|CRISPRCasFinder	3571409-3571435	27	NC_019739	Microcoleus sp. PCC 7113 plasmid pMIC7113.01, complete sequence	129810-129836	5	0.815
CP033356_4	4.1\|3571409\|27\|CP033356\|CRISPRCasFinder	3571409-3571435	27	NZ_LR134256	Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence	1565-1591	5	0.815
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	113183-113214	6	0.812
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	120706-120737	6	0.812
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	68243-68274	6	0.812
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	68247-68278	6	0.812
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	68254-68285	6	0.812
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	68253-68284	6	0.812
CP033356_2	2.18\|961149\|32\|CP033356\|CRISPRCasFinder,CRT	961149-961180	32	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	305581-305612	7	0.781
CP033356_2	2.21\|961332\|32\|CP033356\|CRISPRCasFinder,CRT	961332-961363	32	MT162468	Synechococcus phage S-H25, complete genome	90729-90760	7	0.781
CP033356_2	2.26\|961638\|32\|CP033356\|CRISPRCasFinder,CRT	961638-961669	32	NZ_LR594663	Variovorax sp. RA8 plasmid 2	279825-279856	7	0.781
CP033356_3	3.15\|979549\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979549-979580	32	NZ_CP023073	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666d, complete sequence	24323-24354	7	0.781
CP033356_2	2.2\|961148\|33\|CP033356\|PILER-CR	961148-961180	33	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	305580-305612	8	0.758
CP033356_2	2.23\|961454\|32\|CP033356\|CRISPRCasFinder,CRT	961454-961485	32	MN693323	Marine virus AFVG_25M87, complete genome	37357-37388	8	0.75
CP033356_2	2.26\|961638\|32\|CP033356\|CRISPRCasFinder,CRT	961638-961669	32	MT108725	Pseudomonas phage Epa5, complete genome	54783-54814	8	0.75
CP033356_2	2.28\|961760\|32\|CP033356\|CRISPRCasFinder,CRT	961760-961791	32	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	234396-234427	8	0.75
CP033356_2	2.28\|961760\|32\|CP033356\|CRISPRCasFinder,CRT	961760-961791	32	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	85616-85647	8	0.75
CP033356_3	3.7\|979061\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979061-979092	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1326101-1326132	8	0.75
CP033356_3	3.10\|979244\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979244-979275	32	MN908689	Arthrobacter phage DrSierra, complete genome	14906-14937	8	0.75
CP033356_3	3.16\|979610\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979610-979641	32	NZ_CP026096	Bacillus asahii strain OM18 plasmid pOM18, complete sequence	34073-34104	8	0.75
CP033356_2	2.12\|961759\|33\|CP033356\|PILER-CR	961759-961791	33	NZ_CP049914	Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence	234396-234428	9	0.727
CP033356_2	2.12\|961759\|33\|CP033356\|PILER-CR	961759-961791	33	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	85616-85648	9	0.727
CP033356_2	2.18\|961149\|32\|CP033356\|CRISPRCasFinder,CRT	961149-961180	32	NC_013859	Azospirillum sp. B510 plasmid pAB510e, complete sequence	345226-345257	9	0.719
CP033356_2	2.18\|961149\|32\|CP033356\|CRISPRCasFinder,CRT	961149-961180	32	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	476514-476545	9	0.719
CP033356_2	2.19\|961210\|32\|CP033356\|CRISPRCasFinder,CRT	961210-961241	32	JN672684	Enterobacteria phage F20, partial genome	14629-14660	9	0.719
CP033356_2	2.25\|961577\|32\|CP033356\|CRISPRCasFinder,CRT	961577-961608	32	KM507819	Escherichia phage 121Q, complete genome	157385-157416	9	0.719
CP033356_2	2.26\|961638\|32\|CP033356\|CRISPRCasFinder,CRT	961638-961669	32	NZ_CP038392	Escherichia coli O157:H7 strain DEC5B plasmid pDEC5B-4, complete sequence	49-80	9	0.719
CP033356_2	2.26\|961638\|32\|CP033356\|CRISPRCasFinder,CRT	961638-961669	32	NZ_CP027439	Escherichia coli strain 2012C-4221 plasmid unnamed2, complete sequence	13856-13887	9	0.719
CP033356_2	2.26\|961638\|32\|CP033356\|CRISPRCasFinder,CRT	961638-961669	32	MT108731	Pseudomonas phage Epa43, complete genome	17620-17651	9	0.719
CP033356_3	3.6\|979000\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979000-979031	32	NZ_CP017782	Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence	203266-203297	9	0.719
CP033356_3	3.11\|979305\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979305-979336	32	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	247366-247397	9	0.719
CP033356_2	2.25\|961577\|32\|CP033356\|CRISPRCasFinder,CRT	961577-961608	32	NC_028822	Escherichia phage P483, complete genome	30079-30110	10	0.688
CP033356_2	2.30\|961882\|32\|CP033356\|CRISPRCasFinder,CRT	961882-961913	32	NZ_CP046164	Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence	362233-362264	10	0.688
CP033356_2	2.30\|961882\|32\|CP033356\|CRISPRCasFinder,CRT	961882-961913	32	NZ_CP046067	Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence	110732-110763	10	0.688
CP033356_2	2.30\|961882\|32\|CP033356\|CRISPRCasFinder,CRT	961882-961913	32	NZ_CP009266	Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence	36435-36466	10	0.688
CP033356_2	2.30\|961882\|32\|CP033356\|CRISPRCasFinder,CRT	961882-961913	32	NZ_CP045357	Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence	217923-217954	10	0.688
CP033356_2	2.30\|961882\|32\|CP033356\|CRISPRCasFinder,CRT	961882-961913	32	MN693596	Marine virus AFVG_25M324, complete genome	45600-45631	10	0.688
CP033356_3	3.12\|979366\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979366-979397	32	NZ_CP030922	Escherichia coli strain KL53 plasmid pKL53-S, complete sequence	29059-29090	11	0.656
CP033356_3	3.12\|979366\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979366-979397	32	NZ_CP042584	Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence	20787-20818	11	0.656
CP033356_3	3.14\|979488\|32\|CP033356\|PILER-CR,CRISPRCasFinder,CRT	979488-979519	32	NZ_CP051164	Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence	7333-7364	11	0.656

1. spacer 3.8|979122|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026270 (Klebsiella oxytoca strain KONIH4 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.969

agtgtccacactgcggcgctgaaaaatgcaac	CRISPR spacer
agtgtccgcactgcggcgctgaaaaatgcaac	Protospacer
*******.************************

2. spacer 3.1|978695|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 2, identity: 0.938

agcacacattgtgtgacggtcgccgtctggtt	CRISPR spacer
aacacacattgtgcgacggtcgccgtctggtt	Protospacer
*.***********.******************

3. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to MT374854 (Yersinia phage vB_YpM_6, complete genome) position: , mismatch: 3, identity: 0.906

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgtaaccactgcgatatgggcgatgacacggc	Protospacer
*****************************..

4. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to MT374853 (Yersinia phage vB_YpM_5, complete genome) position: , mismatch: 3, identity: 0.906

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgtaaccactgcgatatgggcgatgacacggc	Protospacer
*****************************..

5. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to AF083977 (Bacteriophage Mu, complete genome) position: , mismatch: 3, identity: 0.906

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacagc	Protospacer
**.***************************.

6. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to M64097 (Bacteriophage Mu left end) position: , mismatch: 3, identity: 0.906

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacagc	Protospacer
**.***************************.

7. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to NC_000929 (Enterobacteria phage Mu, complete genome) position: , mismatch: 3, identity: 0.906

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacagc	Protospacer
**.***************************.

8. spacer 2.1|961087|33|CP033356|PILER-CR matches to MT374854 (Yersinia phage vB_YpM_6, complete genome) position: , mismatch: 4, identity: 0.879

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgtaaccactgcgatatgggcgatgacacggc	Protospacer
.*****************************..

9. spacer 2.1|961087|33|CP033356|PILER-CR matches to MT374853 (Yersinia phage vB_YpM_5, complete genome) position: , mismatch: 4, identity: 0.879

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgtaaccactgcgatatgggcgatgacacggc	Protospacer
.*****************************..

10. spacer 2.1|961087|33|CP033356|PILER-CR matches to AF083977 (Bacteriophage Mu, complete genome) position: , mismatch: 4, identity: 0.879

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacagc	Protospacer
.**.***************************.

11. spacer 2.1|961087|33|CP033356|PILER-CR matches to M64097 (Bacteriophage Mu left end) position: , mismatch: 4, identity: 0.879

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacagc	Protospacer
.**.***************************.

12. spacer 2.1|961087|33|CP033356|PILER-CR matches to NC_000929 (Enterobacteria phage Mu, complete genome) position: , mismatch: 4, identity: 0.879

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacagc	Protospacer
.**.***************************.

13. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to NC_013594 (Escherichia phage D108, complete genome) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

14. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to KP010268 (Enterobacteria phage SfMu, complete genome) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

15. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to LR595867 (Escherichia virus Mu_3F6 genome assembly, chromosome: 1) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

16. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to MT374852 (Yersinia phage vB_YpM_3, complete genome) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

17. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to MT374856 (Yersinia phage vB_YpM_23, complete genome) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

18. spacer 2.17|961088|32|CP033356|CRISPRCasFinder,CRT matches to MT591577 (Yersinia phage vB_YpM_Tongde, complete genome) position: , mismatch: 4, identity: 0.875

tgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
tgcaaccactgcgatatgggcgatgacacggc	Protospacer
**.**************************..

19. spacer 4.1|3571409|27|CP033356|CRISPRCasFinder matches to AP013473 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G18, isolate: uvMED-CGR-C82-MedDCM-OCT-S28-C40) position: , mismatch: 4, identity: 0.852

ctccgcctccgcaggcattgatatagc	CRISPR spacer
ctctgcatccgcaggcattgatataag	Protospacer
***.** ******************.

20. spacer 2.1|961087|33|CP033356|PILER-CR matches to MT591577 (Yersinia phage vB_YpM_Tongde, complete genome) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

21. spacer 2.1|961087|33|CP033356|PILER-CR matches to NC_013594 (Escherichia phage D108, complete genome) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

22. spacer 2.1|961087|33|CP033356|PILER-CR matches to KP010268 (Enterobacteria phage SfMu, complete genome) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

23. spacer 2.1|961087|33|CP033356|PILER-CR matches to LR595867 (Escherichia virus Mu_3F6 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

24. spacer 2.1|961087|33|CP033356|PILER-CR matches to MT374852 (Yersinia phage vB_YpM_3, complete genome) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

25. spacer 2.1|961087|33|CP033356|PILER-CR matches to MT374856 (Yersinia phage vB_YpM_23, complete genome) position: , mismatch: 5, identity: 0.848

gtgtaaccactgcgatatgggcgatgacacaaa	CRISPR spacer
atgcaaccactgcgatatgggcgatgacacggc	Protospacer
.**.**************************..

26. spacer 2.2|961148|33|CP033356|PILER-CR matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.848

gcgggaagcgcagcagaacgcccggtcgcagcg-	CRISPR spacer
gcgcgaaccgcagcagaacgcccgg-cgcttcgg	Protospacer
*** *** ***************** ***  **

27. spacer 2.18|961149|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

cgggaagcgcagcagaacgcccggtcgcagcg-	CRISPR spacer
cgcgaaccgcagcagaacgcccgg-cgcttcgg	Protospacer
** *** ***************** ***  **

28. spacer 4.1|3571409|27|CP033356|CRISPRCasFinder matches to NC_019739 (Microcoleus sp. PCC 7113 plasmid pMIC7113.01, complete sequence) position: , mismatch: 5, identity: 0.815

ctccgcctccgcaggcattgatatagc	CRISPR spacer
agccgccgccgcaggcattgatattgg	Protospacer
  ***** **************** *

29. spacer 4.1|3571409|27|CP033356|CRISPRCasFinder matches to NZ_LR134256 (Klebsiella aerogenes strain NCTC9644 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.815

ctccgcctccgcaggcattgatatagc	CRISPR spacer
ctccacctccgcaggcattggtactac	Protospacer
****.***************.**. .*

30. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

31. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

32. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

33. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

34. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

35. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 6, identity: 0.812

agcgcgtca--ggaacgtttctggggtggcctga	CRISPR spacer
--tgcggcaatggaacggttctggggtagcctga	Protospacer
  .*** **  ****** *********.******

36. spacer 2.18|961149|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 7, identity: 0.781

cgggaagcgcagcagaacgcccggtcgcagcg	CRISPR spacer
ttgtccgcgcagcagatcccccggtcgcagcg	Protospacer
. *   ********** * *************

37. spacer 2.21|961332|32|CP033356|CRISPRCasFinder,CRT matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 7, identity: 0.781

acgatccagatatttggctggatgcaatcggt-	CRISPR spacer
ccgatccagatattatgctggatg-gattgtta	Protospacer
 *************  ******** .**.* *

38. spacer 2.26|961638|32|CP033356|CRISPRCasFinder,CRT matches to NZ_LR594663 (Variovorax sp. RA8 plasmid 2) position: , mismatch: 7, identity: 0.781

ccgttgatcagaacggcaacgaacgcacgtac	CRISPR spacer
acgtggtggagatcggcaacgaacgcaagtac	Protospacer
 *** *   *** ************** ****

39. spacer 3.15|979549|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023073 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666d, complete sequence) position: , mismatch: 7, identity: 0.781

tttgaaatcgctattcttattgctgtagcagt	CRISPR spacer
ttcgccgtcgctgtttttattgctgtagcact	Protospacer
**.*  .*****.**.************** *

40. spacer 2.2|961148|33|CP033356|PILER-CR matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 8, identity: 0.758

gcgggaagcgcagcagaacgcccggtcgcagcg	CRISPR spacer
attgtccgcgcagcagatcccccggtcgcagcg	Protospacer
.. *   ********** * *************

41. spacer 2.23|961454|32|CP033356|CRISPRCasFinder,CRT matches to MN693323 (Marine virus AFVG_25M87, complete genome) position: , mismatch: 8, identity: 0.75

gcttttatgtctggtggatataacgcactgaa	CRISPR spacer
gctcttatggctggtggatataatggatcaac	Protospacer
***.***** *************.* *...*

42. spacer 2.26|961638|32|CP033356|CRISPRCasFinder,CRT matches to MT108725 (Pseudomonas phage Epa5, complete genome) position: , mismatch: 8, identity: 0.75

ccgttgatcagaacggcaacgaacgcacgtac	CRISPR spacer
acgtcgatcggaacggcaacgaactgaccttg	Protospacer
 ***.****.**************  ** *

43. spacer 2.28|961760|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

----ccatttttgatcatctcctccagcctgctgag	CRISPR spacer
ggtaaca----cgatcgtctcttccagcctgctgag	Protospacer
     **    .****.****.**************

44. spacer 2.28|961760|32|CP033356|CRISPRCasFinder,CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 8, identity: 0.75

ccatttttgatcatctcctccagcctgctgag	CRISPR spacer
taatttttgttcatctcttccagccttatcat	Protospacer
. ******* *******.********  * *

45. spacer 3.7|979061|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 8, identity: 0.75

agcgcgtcaggaacgtttctggggtggcctga	CRISPR spacer
cgcgcgtcaggatcgttcctggggctgggcga	Protospacer
 *********** ****.******. *  .**

46. spacer 3.10|979244|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to MN908689 (Arthrobacter phage DrSierra, complete genome) position: , mismatch: 8, identity: 0.75

---ttcggagtccggatcatcattcaggataacga	CRISPR spacer
gagctc---gtccggatcagcattcaggacaaccc	Protospacer
   .**   ********** *********.***

47. spacer 3.16|979610|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026096 (Bacillus asahii strain OM18 plasmid pOM18, complete sequence) position: , mismatch: 8, identity: 0.75

cgttaa--ctaaaacgaacaaaacagggaaatca	CRISPR spacer
--ttgattctaaaacgaaaaaaacaggtaaactg	Protospacer
  **.*  ********** ******** ***...

48. spacer 2.12|961759|33|CP033356|PILER-CR matches to NZ_CP049914 (Vibrio sp. HDW18 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

----gccatttttgatcatctcctccagcctgctgag	CRISPR spacer
cggtaaca----cgatcgtctcttccagcctgctgag	Protospacer
    . **    .****.****.**************

49. spacer 2.12|961759|33|CP033356|PILER-CR matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 9, identity: 0.727

gccatttttgatcatctcctccagcctgctgag	CRISPR spacer
ttaatttttgttcatctcttccagccttatcat	Protospacer
 . ******* *******.********  * *

50. spacer 2.18|961149|32|CP033356|CRISPRCasFinder,CRT matches to NC_013859 (Azospirillum sp. B510 plasmid pAB510e, complete sequence) position: , mismatch: 9, identity: 0.719

cgggaagcgcagcagaacgcccggtcgcagcg	CRISPR spacer
cgggaagcccagcagcacgcccgaacaggcgg	Protospacer
******** ****** *******. *. .  *

51. spacer 2.18|961149|32|CP033356|CRISPRCasFinder,CRT matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 9, identity: 0.719

cgggaagcgcagcagaacgcccggtcgcagcg	CRISPR spacer
cgggaagcccagcagcacgcccgaacaggcgg	Protospacer
******** ****** *******. *. .  *

52. spacer 2.19|961210|32|CP033356|CRISPRCasFinder,CRT matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 9, identity: 0.719

atcaccggcacgcgcgataacgggtctgatta	CRISPR spacer
aagcaggtgacgcgggataacgggtatgatta	Protospacer
*     *  ***** ********** ******

53. spacer 2.25|961577|32|CP033356|CRISPRCasFinder,CRT matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.719

cgtatcccgaaatcacgttcaagaaaaatccg	CRISPR spacer
tgcactgagaaatcaagttcaagaaaaaaccc	Protospacer
.*.*..  ******* ************ **

54. spacer 2.26|961638|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP038392 (Escherichia coli O157:H7 strain DEC5B plasmid pDEC5B-4, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttgatcagaacggcaacgaacgcacgtac	CRISPR spacer
tcgttgatcagaacgggaaggaactggcccgc	Protospacer
.*************** ** ****  .* ..*

55. spacer 2.26|961638|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP027439 (Escherichia coli strain 2012C-4221 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

ccgttgatcagaacggcaacgaacgcacgtac	CRISPR spacer
tcgttgatcagaacgggaaggaactggcccgc	Protospacer
.*************** ** ****  .* ..*

56. spacer 2.26|961638|32|CP033356|CRISPRCasFinder,CRT matches to MT108731 (Pseudomonas phage Epa43, complete genome) position: , mismatch: 9, identity: 0.719

ccgttgatcagaacggcaacgaacgcacgtac	CRISPR spacer
acgtcgatcggaacggcaacgaactgaccctg	Protospacer
 ***.****.**************  ** .

57. spacer 3.6|979000|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017782 (Rhodobacter sp. LPB0142 plasmid pEJ01, complete sequence) position: , mismatch: 9, identity: 0.719

ggtgttactgatggtggggcgctggatgaggc	CRISPR spacer
aggatgcgcgagggtcgggcgctggatgaggc	Protospacer
.* .*   .** *** ****************

58. spacer 3.11|979305|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aaatcgcgcggcgatcgactcaaggcggcgac-	CRISPR spacer
gtggcgcgcggcgatcgcctcgaggc-gcgctg	Protospacer
. . ************* ***.**** *** .

59. spacer 2.25|961577|32|CP033356|CRISPRCasFinder,CRT matches to NC_028822 (Escherichia phage P483, complete genome) position: , mismatch: 10, identity: 0.688

cgtatcccgaaatcacgttcaagaaaaatccg	CRISPR spacer
ccatcatggaaatcacattcaagacaaatcca	Protospacer
*   . . ********.******* ******.

60. spacer 2.30|961882|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP046164 (Vibrio sp. THAF191c plasmid pTHAF191c_c, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaaataaatatgagtgaagaagccaaagcc	CRISPR spacer
ccgtagccaatatcagtgaagatgccaaagct	Protospacer
 .  *.. ***** ******** ********.

61. spacer 2.30|961882|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP046067 (Vibrio sp. THAF191d plasmid pTHAF191d_c, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaaataaatatgagtgaagaagccaaagcc	CRISPR spacer
ccgtagccaatatcagtgaagatgccaaagct	Protospacer
 .  *.. ***** ******** ********.

62. spacer 2.30|961882|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP009266 (Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaaataaatatgagtgaagaagccaaagcc	CRISPR spacer
ccgtagccaatatcagtgaagatgccaaagct	Protospacer
 .  *.. ***** ******** ********.

63. spacer 2.30|961882|32|CP033356|CRISPRCasFinder,CRT matches to NZ_CP045357 (Vibrio sp. THAF64 plasmid pTHAF64_b, complete sequence) position: , mismatch: 10, identity: 0.688

gtcaaataaatatgagtgaagaagccaaagcc	CRISPR spacer
ccgtagccaatatcagtgaagatgccaaagct	Protospacer
 .  *.. ***** ******** ********.

64. spacer 2.30|961882|32|CP033356|CRISPRCasFinder,CRT matches to MN693596 (Marine virus AFVG_25M324, complete genome) position: , mismatch: 10, identity: 0.688

gtcaaataaatatgagtgaagaagccaaagcc	CRISPR spacer
taggagcaaaaatgagtgaagaagcaaaagag	Protospacer
   .*..*** ************** ****

65. spacer 3.12|979366|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030922 (Escherichia coli strain KL53 plasmid pKL53-S, complete sequence) position: , mismatch: 11, identity: 0.656

aaaatcgtgagtgactatcgttctgttattgc	CRISPR spacer
ttgatcgtcagtgactatggttctgtctcaaa	Protospacer
  .***** ********* *******. . .

66. spacer 3.12|979366|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042584 (Escherichia coli strain LD91-1 plasmid pLD91-1-76kb, complete sequence) position: , mismatch: 11, identity: 0.656

aaaatcgtgagtgactatcgttctgttattgc	CRISPR spacer
ttgatcgtcagtgactatggttctgtctcaaa	Protospacer
  .***** ********* *******. . .

67. spacer 3.14|979488|32|CP033356|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051164 (Geobacillus subterraneus strain CPW16 plasmid pBsrF30, complete sequence) position: , mismatch: 11, identity: 0.656

tggccggggaaacaaggaaagtcctggttttt	CRISPR spacer
gatttagggaaacaaagaaagtcctgattaaa	Protospacer
 . ...*********.**********.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

647492 : 684133

Cronobacter_phage(71.05%)

tRNA,capsid,portal,tail,terminase,head,holin,integrase

attL 637361:637382|attR 686442:686463

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
637361:637382	attL	NA	NA	NA	NA
QAX34883.1\|647492_648530_-\|integrase	integrase	F1BUS9	Erwinia_phage	7.1e-124	65.6
QAX34884.1\|648516_649431_-	hypothetical protein	NA	NA	NA	NA
QAX34885.1\|649438_650017_-	phage repressor protein	A0A218M4J1	Erwinia_phage	1.5e-27	39.5
QAX34886.1\|650136_650358_+	regulator	NA	NA	NA	NA
QAX34887.1\|650388_650892_+	hypothetical protein	F1BUN6	Cronobacter_phage	3.5e-60	72.5
QAX34888.1\|650901_651129_+	hypothetical protein	NA	NA	NA	NA
QAX34889.1\|651118_651544_+	hypothetical protein	F1BUN5	Cronobacter_phage	2.9e-23	49.6
QAX34890.1\|651543_651945_+	hypothetical protein	F1BUN2	Cronobacter_phage	1.9e-48	66.9
QAX38649.1\|652091_652268_+	DUF2732 family protein	NA	NA	NA	NA
QAX34891.1\|652258_652855_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.8e-74	72.3
QAX34892.1\|652851_653181_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	3.0e-12	45.2
QAX34893.1\|653170_654031_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	F1BUN1	Cronobacter_phage	4.9e-131	82.4
QAX34894.1\|654027_656049_+	replication endonuclease	F1BUM9	Cronobacter_phage	7.9e-297	74.6
QAX34895.1\|656168_656375_+	hypothetical protein	NA	NA	NA	NA
QAX34896.1\|656348_656672_-	transcriptional regulator	F1BUM8	Cronobacter_phage	8.0e-50	92.3
QAX34897.1\|656668_657730_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	3.0e-162	77.3
QAX34898.1\|657726_659502_-\|terminase	terminase	F1BUM5	Cronobacter_phage	7.5e-291	83.3
QAX34899.1\|659662_660463_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	3.2e-76	54.8
QAX34900.1\|660524_661547_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	1.1e-158	81.2
QAX34901.1\|661550_662255_+\|terminase	terminase	F1BUM0	Cronobacter_phage	1.0e-86	67.4
QAX34902.1\|662258_662453_+	hypothetical protein	Q8W634	Enterobacteria_phage	3.3e-11	58.6
QAX34903.1\|662498_663002_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	3.4e-63	81.3
QAX34904.1\|662998_663505_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	5.2e-64	69.8
QAX34905.1\|663501_664209_+	hypothetical protein	F1BUL6	Cronobacter_phage	3.4e-101	76.5
QAX34906.1\|664205_665333_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	3.3e-175	83.7
QAX34907.1\|665329_665785_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.5e-57	72.2
QAX34908.1\|665794_666088_+\|holin	holin	C7BGD7	Burkholderia_phage	1.3e-14	46.2
QAX34909.1\|666084_666426_+	M15 family peptidase	F1BUL3	Cronobacter_phage	2.2e-50	91.1
QAX34910.1\|666425_666758_+	hypothetical protein	F1BUL2	Cronobacter_phage	2.0e-35	70.0
QAX34911.1\|666729_666918_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.5e-21	79.0
QAX34912.1\|666895_667162_+	hypothetical protein	A5X9I7	Aeromonas_virus	3.7e-21	63.4
QAX34913.1\|667349_669320_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	3.6e-270	69.8
QAX34914.1\|669316_669646_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
QAX34915.1\|669642_670827_+	hypothetical protein	F1BUK6	Cronobacter_phage	1.1e-178	78.4
QAX34916.1\|670813_671407_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.4e-89	82.1
QAX34917.1\|671416_673429_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.1e-148	81.2
QAX34918.1\|673431_673962_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.4e-13	32.4
QAX34919.1\|673951_674677_+	hypothetical protein	F1BUK1	Cronobacter_phage	3.8e-68	56.4
QAX34920.1\|674648_675194_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.5e-58	71.4
QAX34921.1\|675193_676897_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.7e-223	81.3
QAX34922.1\|677054_677276_+	hypothetical protein	NA	NA	NA	NA
QAX34923.1\|678068_678575_+	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
QAX38650.1\|678698_680546_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
QAX34924.1\|680695_682441_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
QAX34925.1\|682676_682892_-	30S ribosomal protein S21	NA	NA	NA	NA
QAX34926.1\|683119_684133_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.2e-109	59.5
686442:686463	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1180752 : 1242503

Cronobacter_phage(57.89%)

tRNA,capsid,portal,tail,terminase,head,holin,integrase

attL 1188729:1188744|attR 1216419:1216434

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX35382.1\|1180752_1181520_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
QAX35383.1\|1181560_1181908_+	50S ribosomal protein L19	NA	NA	NA	NA
QAX35384.1\|1182063_1183284_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
QAX35385.1\|1183276_1183795_-	YfiR family protein	NA	NA	NA	NA
QAX35386.1\|1184234_1185305_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
QAX35387.1\|1185314_1186436_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
QAX35388.1\|1186493_1187402_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
QAX35389.1\|1187362_1188523_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
QAX38669.1\|1188622_1188670_-	hypothetical protein	NA	NA	NA	NA
1188729:1188744	attL	NA	NA	NA	NA
QAX35390.1\|1188833_1189853_-\|integrase	integrase	A0A0F7LBR0	Escherichia_phage	6.3e-109	58.5
QAX35391.1\|1189892_1190192_-	helix-turn-helix domain-containing protein	Q1JS21	Enterobacteria_phage	3.8e-22	53.2
QAX35392.1\|1190300_1190639_+	hypothetical protein	NA	NA	NA	NA
QAX35393.1\|1190664_1190997_+	hypothetical protein	NA	NA	NA	NA
QAX35394.1\|1191006_1191576_+	3'-5' exoribonuclease	K7PLW7	Enterobacteria_phage	1.2e-43	46.8
QAX35395.1\|1191578_1191797_+	hypothetical protein	NA	NA	NA	NA
QAX35396.1\|1191835_1194493_+	bifunctional DNA primase/helicase	A0A077K8T2	Ralstonia_phage	7.1e-245	47.6
QAX35397.1\|1194520_1194844_-	transcriptional regulator	F1BUM8	Cronobacter_phage	1.3e-36	73.1
QAX35398.1\|1194843_1195863_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	2.5e-134	67.8
QAX35399.1\|1195859_1197644_-\|terminase	terminase	F1BUM5	Cronobacter_phage	1.9e-246	69.5
QAX35400.1\|1197701_1198691_+\|capsid	phage capsid protein	F1BUM4	Cronobacter_phage	2.5e-46	52.3
QAX35401.1\|1198725_1199754_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	3.7e-133	71.6
QAX35402.1\|1199765_1200464_+\|terminase	terminase	F1BUM0	Cronobacter_phage	3.6e-63	52.6
QAX35403.1\|1200562_1201015_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	1.2e-48	64.7
QAX35404.1\|1201011_1201494_+\|tail	phage tail protein	F1BUL7	Cronobacter_phage	2.3e-37	48.7
QAX35405.1\|1201490_1202195_+	hypothetical protein	F1BUL6	Cronobacter_phage	1.8e-70	59.9
QAX35406.1\|1202191_1203319_+	DUF2586 domain-containing protein	F1BUL5	Cronobacter_phage	2.1e-174	83.5
QAX35407.1\|1203315_1203771_+	DUF2597 family protein	F1BUL4	Cronobacter_phage	2.3e-58	70.9
QAX35408.1\|1203783_1204080_+\|holin	holin	C7BGD7	Burkholderia_phage	2.4e-16	48.2
QAX35409.1\|1204076_1204418_+	M15 family peptidase	F1BUL3	Cronobacter_phage	7.6e-51	93.1
QAX35410.1\|1204417_1204750_+	hypothetical protein	F1BUL2	Cronobacter_phage	9.7e-35	69.1
QAX35411.1\|1204676_1204910_+	hypothetical protein	F1BUL1	Cronobacter_phage	1.7e-30	83.1
QAX35412.1\|1204887_1205154_+	hypothetical protein	A5X9I7	Aeromonas_virus	2.4e-20	61.0
QAX35413.1\|1205341_1207309_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	4.3e-271	70.7
QAX35414.1\|1207305_1207635_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	3.8e-39	72.4
QAX35415.1\|1207631_1208816_+	hypothetical protein	F1BUK6	Cronobacter_phage	1.1e-178	78.4
QAX35416.1\|1208802_1209396_+	hypothetical protein	F1BUK5	Cronobacter_phage	1.4e-89	82.1
QAX35417.1\|1209405_1211418_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.1e-148	81.2
QAX35418.1\|1211420_1211951_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	4.4e-13	32.4
QAX35419.1\|1211940_1212666_+	hypothetical protein	F1BUK1	Cronobacter_phage	6.6e-68	56.4
QAX35420.1\|1212637_1213183_+	hypothetical protein	F1BUJ9	Cronobacter_phage	3.2e-59	72.0
QAX35421.1\|1213182_1214886_+	hypothetical protein	F1BUJ7	Cronobacter_phage	2.9e-223	81.3
QAX35422.1\|1214784_1215138_-	hypothetical protein	NA	NA	NA	NA
QAX35423.1\|1215919_1216306_-	hypothetical protein	NA	NA	NA	NA
QAX35424.1\|1216463_1216802_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
1216419:1216434	attR	NA	NA	NA	NA
QAX35425.1\|1217073_1217811_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
QAX35426.1\|1217942_1218923_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
QAX35427.1\|1218919_1219651_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
QAX35428.1\|1219780_1222354_+	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	9.0e-128	35.6
QAX35429.1\|1228303_1228759_+	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.9e-34	50.0
QAX35430.1\|1228862_1230164_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.2e-43	30.4
QAX35431.1\|1230160_1230484_-	YfiM family lipoprotein	NA	NA	NA	NA
QAX35432.1\|1230528_1231884_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
QAX35433.1\|1231998_1234659_-	protein lysine acetyltransferase Pat	NA	NA	NA	NA
QAX35434.1\|1234712_1235393_-	DTW domain-containing protein	NA	NA	NA	NA
QAX35435.1\|1235465_1235885_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
QAX35436.1\|1236088_1237126_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
QAX35437.1\|1237241_1237931_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
QAX35438.1\|1238249_1238633_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
QAX35439.1\|1238694_1239282_-	cysteine/O-acetylserine efflux protein	NA	NA	NA	NA
QAX38670.1\|1239384_1240284_+	LysR family transcriptional regulator	NA	NA	NA	NA
QAX35440.1\|1240301_1241636_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
QAX35441.1\|1241765_1242503_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_3

1473793 : 1480641

Salmonella_virus(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX35633.1\|1473793_1473940_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	1.1e-14	73.9
QAX35634.1\|1473955_1474099_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	2.6e-13	85.4
QAX35635.1\|1475088_1477011_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	3.9e-301	77.8
QAX35636.1\|1477017_1477284_-	glycosyltransferase	A8CG95	Salmonella_phage	3.3e-25	79.5
QAX38678.1\|1477252_1477642_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	1.3e-59	97.5
QAX35637.1\|1477740_1478445_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX35638.1\|1479699_1480641_-	hypothetical protein	E7DYY8	Enterobacteria_phage	4.1e-147	87.8

DBSCAN-SWA_4

1712223 : 1721394

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX35852.1\|1712223_1713171_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
QAX35853.1\|1713154_1713886_+	ABC transporter permease	NA	NA	NA	NA
QAX35854.1\|1713866_1713974_-	protein YohO	NA	NA	NA	NA
QAX35855.1\|1714033_1714765_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
QAX35856.1\|1714987_1716673_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
QAX35857.1\|1716669_1717389_+	DNA-binding response regulator	NA	NA	NA	NA
QAX35858.1\|1717435_1717903_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	6.7e-74	89.7
QAX35859.1\|1717959_1718490_-	DUF1307 domain-containing protein	NA	NA	NA	NA
QAX35860.1\|1718661_1719120_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
QAX35861.1\|1719360_1721394_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	6.1e-55	26.9

DBSCAN-SWA_5

1800426 : 1810933

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX35926.1\|1800426_1801830_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	26.5
QAX35927.1\|1802007_1802901_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
QAX35928.1\|1803277_1804363_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
QAX35929.1\|1804362_1805262_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.8e-30	36.3
QAX38690.1\|1805309_1806188_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
QAX35930.1\|1806188_1806740_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-52	58.0
QAX35931.1\|1806745_1807720_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
QAX35932.1\|1807735_1808509_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
QAX35933.1\|1808513_1809593_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.7e-16	24.5
QAX35934.1\|1809619_1810933_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_6

1921055 : 1932345

Burkholderia_phage(25.0%)

integrase

attL 1915309:1915324|attR 1929656:1929671

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1915309:1915324	attL	NA	NA	NA	NA
QAX36048.1\|1921055_1922237_+	recombinase RecF	C7BGE8	Burkholderia_phage	2.4e-35	26.9
QAX36049.1\|1922237_1922984_+	HNH endonuclease	NA	NA	NA	NA
QAX36050.1\|1923085_1924342_-\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	3.4e-80	41.3
QAX36051.1\|1924602_1924881_+	hypothetical protein	NA	NA	NA	NA
QAX36052.1\|1924822_1924984_+	hypothetical protein	NA	NA	NA	NA
QAX36053.1\|1925110_1925530_+	DNA polymerase V subunit UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
QAX36054.1\|1925532_1926801_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	3.8e-228	92.7
QAX36055.1\|1927255_1927468_+	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
QAX38694.1\|1927478_1927667_+	cold-shock protein	NA	NA	NA	NA
QAX36056.1\|1927925_1929104_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	8.6e-110	57.2
QAX36057.1\|1929754_1930066_+	hypothetical protein	NA	NA	NA	NA
1929656:1929671	attR	NA	NA	NA	NA
QAX36058.1\|1930145_1930841_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	1.6e-07	27.1
QAX36059.1\|1930914_1932345_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_7

2113096 : 2152415

Shigella_phage(28.57%)

transposase,protease,integrase

attL 2129533:2129549|attR 2144120:2144136

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX36248.1\|2113096_2113693_-\|protease	hydrogenase 1 maturation protease	NA	NA	NA	NA
QAX36249.1\|2113689_2114421_-	Ni/Fe-hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
QAX36250.1\|2114439_2116233_-	hydrogenase 1 large subunit	NA	NA	NA	NA
QAX36251.1\|2116229_2117348_-	twin-arginine translocation signal domain-containing protein	NA	NA	NA	NA
QAX36252.1\|2117841_2119107_+	DUF4427 domain-containing protein	NA	NA	NA	NA
QAX36253.1\|2121624_2122897_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
QAX36254.1\|2124335_2126846_+	hypothetical protein	NA	NA	NA	NA
QAX36255.1\|2126849_2129414_+	hypothetical protein	NA	NA	NA	NA
2129533:2129549	attL	NA	NA	NA	NA
QAX36256.1\|2129720_2130035_-	hypothetical protein	NA	NA	NA	NA
QAX36257.1\|2130046_2130565_-	hypothetical protein	NA	NA	NA	NA
QAX36258.1\|2130618_2131146_-	hypothetical protein	NA	NA	NA	NA
QAX36259.1\|2131158_2131428_-	transcriptional regulator	M1PVU4	Vibrio_phage	4.1e-15	61.9
QAX36260.1\|2131548_2131929_+	hypothetical protein	NA	NA	NA	NA
QAX36261.1\|2132086_2132629_+	hypothetical protein	NA	NA	NA	NA
QAX36262.1\|2132651_2133140_+	DNA repair protein RadC	NA	NA	NA	NA
QAX36263.1\|2133231_2133663_+	DUF2787 domain-containing protein	NA	NA	NA	NA
QAX36264.1\|2133723_2134083_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
QAX36265.1\|2134192_2134810_+	DUF905 domain-containing protein	NA	NA	NA	NA
QAX36266.1\|2134886_2135834_+\|integrase	site-specific integrase	A0A1B1P7C7	Bacillus_phage	6.2e-10	31.3
QAX36267.1\|2136047_2136494_-	hypothetical protein	NA	NA	NA	NA
QAX36268.1\|2136758_2136953_+	AlpA family transcriptional regulator	NA	NA	NA	NA
QAX36269.1\|2136954_2137827_+	hypothetical protein	NA	NA	NA	NA
QAX36270.1\|2138036_2139310_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	3.4e-176	98.3
QAX36271.1\|2139521_2143424_+	hypothetical protein	NA	NA	NA	NA
QAX36272.1\|2143745_2145431_-	hypothetical protein	NA	NA	NA	NA
2144120:2144136	attR	NA	NA	NA	NA
QAX36273.1\|2145440_2146106_-	DUF4433 domain-containing protein	NA	NA	NA	NA
QAX36274.1\|2146106_2147504_-	helicase	A0A2H4UW05	Bodo_saltans_virus	6.6e-08	24.8
QAX36275.1\|2149418_2150201_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.4e-137	98.8
QAX36276.1\|2150413_2150518_-	cell filamentation protein	NA	NA	NA	NA
QAX36277.1\|2151100_2152252_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	4.1e-40	35.0
QAX36278.1\|2152208_2152415_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2246584 : 2252396

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX36364.1\|2246584_2247391_-	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	4.6e-14	27.4
QAX36365.1\|2247392_2248385_-	peptide ABC transporter ATP-binding protein SapD	NA	NA	NA	NA
QAX36366.1\|2248384_2249275_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
QAX38709.1\|2249398_2249800_+	DUF4102 domain-containing protein	K7PGY1	Enterobacteria_phage	3.8e-33	58.4
QAX36367.1\|2250099_2250987_-	hypothetical protein	A0A0P0ZCT1	Stx2-converting_phage	5.6e-37	38.5
QAX38710.1\|2251293_2251563_+	hypothetical protein	S4TSR3	Salmonella_phage	1.8e-26	92.1
QAX36368.1\|2251917_2252058_+	pertussis toxin subunit	A0A0U2KD26	Escherichia_phage	1.1e-08	74.3
QAX36369.1\|2252096_2252396_+	pertussis toxin subunit	A0A0U2KD26	Escherichia_phage	2.2e-14	57.1

DBSCAN-SWA_9

2290343 : 2298947

Escherichia_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX36410.1\|2290343_2291717_+	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.8e-51	32.0
QAX36411.1\|2291760_2292696_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	9.4e-144	97.3
QAX36412.1\|2292790_2292928_-	hypothetical protein	A0A0U2JGI6	Escherichia_phage	8.0e-20	97.8
QAX36413.1\|2293371_2296794_+	DUF4765 family protein	A0A0N7KZG3	Stx2-converting_phage	0.0e+00	50.6
QAX36414.1\|2297067_2297406_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
QAX36415.1\|2297458_2297893_-	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	9.4e-30	52.1
QAX36416.1\|2298106_2298316_+	hypothetical protein	NA	NA	NA	NA
QAX36417.1\|2298349_2298532_+	hypothetical protein	NA	NA	NA	NA
QAX36418.1\|2298488_2298947_+\|transposase	IS200/IS605 family transposase IS200F	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5

DBSCAN-SWA_10

2708122 : 2715585

Escherichia_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX36814.1\|2708122_2708362_+	virulence protein MsgA	K7P6H1	Enterobacteria_phage	8.5e-33	88.6
QAX38729.1\|2709235_2710045_+	cytolethal distending toxin subunit B family protein	A5LH53	Enterobacteria_phage	9.2e-63	50.0
QAX36815.1\|2710117_2710495_+	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	2.2e-14	38.4
QAX36816.1\|2710642_2711185_-	hypothetical protein	A0A0U2S643	Escherichia_phage	1.1e-70	66.5
QAX36817.1\|2711376_2712105_-	pertussis-like toxin subunit ArtA	A0A0U2KD26	Escherichia_phage	1.4e-62	53.3
QAX36818.1\|2712121_2712535_-	subtilase cytotoxin subunit B	A0A0U2KD34	Escherichia_phage	1.4e-19	38.6
QAX36819.1\|2713485_2714610_-	DUF3626 domain-containing protein	NA	NA	NA	NA
QAX36820.1\|2715126_2715585_-\|transposase	IS200/IS605 family transposase IS200F	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5

DBSCAN-SWA_11

3543140 : 3586649

Escherichia_phage(40.82%)

plate,terminase,lysis,integrase

attL 3539674:3539719|attR 3582758:3582803

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3539674:3539719	attL	NA	NA	NA	NA
QAX37580.1\|3543140_3544559_-\|plate	baseplate J-like family protein	A0A0U2RJZ0	Escherichia_phage	1.3e-59	34.9
QAX37581.1\|3544555_3544888_-	hypothetical protein	NA	NA	NA	NA
QAX37582.1\|3544884_3545601_-	hypothetical protein	A0A0U2JTX5	Escherichia_phage	9.8e-24	30.9
QAX37583.1\|3545597_3546617_-	hypothetical protein	NA	NA	NA	NA
QAX37584.1\|3546616_3546892_-	hypothetical protein	NA	NA	NA	NA
QAX37585.1\|3546888_3547605_-	hypothetical protein	A0A0U2JGI7	Escherichia_phage	6.5e-28	37.1
QAX37586.1\|3547604_3549425_-	hypothetical protein	A0A2R3UAN6	Myoviridae_environmental_samples	3.4e-20	39.7
QAX37587.1\|3549548_3550127_-	hypothetical protein	NA	NA	NA	NA
QAX37588.1\|3550129_3550567_-	hypothetical protein	A0A0U2S616	Escherichia_phage	1.9e-22	36.8
QAX37589.1\|3550570_3551965_-	hypothetical protein	A0A0U2KD19	Escherichia_phage	9.7e-68	36.4
QAX37590.1\|3551969_3552911_-	hypothetical protein	A0A0U2SH76	Escherichia_phage	1.7e-52	37.6
QAX37591.1\|3552894_3553329_-	hypothetical protein	NA	NA	NA	NA
QAX37592.1\|3553325_3553754_-	hypothetical protein	A0A0U2S646	Escherichia_phage	4.2e-22	40.6
QAX37593.1\|3553750_3554233_-	hypothetical protein	NA	NA	NA	NA
QAX37594.1\|3554301_3555333_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	2.3e-74	46.4
QAX37595.1\|3555349_3556210_-	hypothetical protein	NA	NA	NA	NA
QAX37596.1\|3556225_3557842_-	NUDIX domain-containing protein	NA	NA	NA	NA
QAX37597.1\|3557860_3558676_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.5e-52	41.6
QAX37598.1\|3558672_3560094_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	1.2e-89	37.5
QAX37599.1\|3560105_3561437_-\|terminase	terminase	A0A0U2JTW9	Escherichia_phage	1.2e-152	59.5
QAX37600.1\|3561438_3562482_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	7.5e-65	50.6
QAX37601.1\|3562547_3563066_-	Rha family transcriptional regulator	Q38450	Enterobacteria_phage	1.1e-90	95.9
QAX37602.1\|3563088_3563295_+	hypothetical protein	H6WRZ7	Salmonella_phage	4.8e-16	93.5
QAX37603.1\|3563272_3563731_-\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	7.5e-62	83.6
QAX37604.1\|3563727_3564216_-	lysozyme	A0A2H4FND7	Salmonella_phage	5.5e-79	87.0
QAX37605.1\|3564215_3564488_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	2.2e-40	95.6
QAX37606.1\|3564950_3565640_-	antiterminator	I6PDF8	Cronobacter_phage	8.7e-54	50.7
QAX37607.1\|3565636_3565777_-	YlcG family protein	K7PHH3	Enterobacteria_phage	8.8e-06	74.2
QAX37608.1\|3565773_3566385_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.3e-61	73.9
QAX37609.1\|3566377_3566548_-	hypothetical protein	K7P7K0	Enterobacteria_phage	2.0e-20	92.5
QAX37610.1\|3566547_3567003_-	hypothetical protein	I6PD71	Cronobacter_phage	7.0e-60	66.9
QAX37611.1\|3567371_3567809_+	hypothetical protein	A0A222YWI5	Escherichia_phage	2.8e-13	41.1
QAX37612.1\|3567810_3568428_-	DUF551 domain-containing protein	K7P7E4	Enterobacteria_phage	1.1e-68	86.5
QAX37613.1\|3568427_3568628_-	hypothetical protein	K7P6F8	Enterobacteria_phage	3.7e-29	98.5
QAX37614.1\|3568620_3569010_-	ead/Ea22-like family protein	K7P6V8	Enterobacteria_phage	7.9e-36	98.8
QAX37615.1\|3569006_3569204_-	hypothetical protein	K7PKS4	Enterobacteria_phage	2.6e-27	100.0
QAX37616.1\|3569200_3569545_-	transcriptional regulator	G8C7U7	Escherichia_phage	2.3e-55	95.6
QAX37617.1\|3569544_3570978_-	helicase DnaB	Q716D2	Shigella_phage	7.5e-233	87.6
QAX37618.1\|3570967_3571867_-	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	1.9e-80	55.7
QAX37619.1\|3572095_3572662_-	hypothetical protein	NA	NA	NA	NA
QAX37620.1\|3572679_3572913_-	transcriptional regulator	A0A0P0ZDD7	Stx2-converting_phage	2.6e-18	62.3
QAX37621.1\|3572954_3573707_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	5.4e-73	64.4
QAX37622.1\|3574062_3574404_+	hypothetical protein	G8C7T6	Escherichia_phage	3.9e-55	96.5
QAX37623.1\|3574674_3575106_+	hypothetical protein	A0A0A0P241	Enterobacteria_phage	7.4e-11	41.0
QAX37624.1\|3575267_3575537_+	hypothetical protein	NA	NA	NA	NA
QAX37625.1\|3575688_3575898_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	7.4e-33	94.2
QAX37626.1\|3575968_3576940_+	hypothetical protein	A0A077KCC0	Edwardsiella_phage	2.5e-38	75.4
QAX37627.1\|3576947_3577232_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.6e-46	90.4
QAX37628.1\|3577250_3578096_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.3e-67	60.7
QAX37629.1\|3578092_3578773_+	exonuclease	M9NZE1	Enterobacteria_phage	2.2e-126	94.7
QAX37630.1\|3578769_3579198_+	regulator	M9NYX4	Enterobacteria_phage	7.5e-72	94.4
QAX37631.1\|3579194_3579347_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.6e-05	44.2
QAX37632.1\|3579343_3580009_+	DNA methyltransferase	G8C7S6	Escherichia_phage	9.5e-106	82.8
QAX37633.1\|3580008_3580233_+	hypothetical protein	NA	NA	NA	NA
QAX37634.1\|3580229_3580451_+	hypothetical protein	NA	NA	NA	NA
QAX37635.1\|3580454_3580676_+	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	1.5e-15	54.3
QAX37636.1\|3580843_3581083_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	3.8e-25	70.5
QAX37637.1\|3581111_3581312_+	hypothetical protein	NA	NA	NA	NA
QAX37638.1\|3581579_3582743_+\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	1.3e-153	68.0
QAX37639.1\|3582948_3584199_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	4.7e-98	47.5
3582758:3582803	attR	NA	NA	NA	NA
QAX37640.1\|3584210_3585314_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
QAX37641.1\|3585596_3586649_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	2.6e-113	58.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP033353

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

374 : 31620

Escherichia_phage(57.14%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX33934.1\|374_1250_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
QAX33935.1\|1329_2253_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
QAX33936.1\|4003_4708_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX33937.1\|5093_5510_+	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
QAX33938.1\|5514_6033_-	hypothetical protein	NA	NA	NA	NA
QAX33939.1\|6098_6803_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX33940.1\|6849_7251_-\|transposase	IS91 family transposase	NA	NA	NA	NA
QAX33941.1\|7400_8261_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
QAX33942.1\|8845_9550_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX33943.1\|10305_11157_+	replication protein	NA	NA	NA	NA
QAX33944.1\|11464_12280_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	3.5e-09	27.6
QAX33945.1\|12340_13144_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
QAX33946.1\|13143_13980_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
QAX33947.1\|14040_14745_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX34173.1\|15647_16121_+	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
QAX33948.1\|16251_17040_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
QAX33949.1\|17241_17946_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX33950.1\|18037_18517_+	transcriptional regulator	NA	NA	NA	NA
QAX33951.1\|18586_21739_-	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA
QAX33952.1\|21762_22938_-	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA
QAX33953.1\|23257_23962_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX33954.1\|24815_26357_+\|transposase	IS91 family transposase	NA	NA	NA	NA
QAX34174.1\|27755_28529_+	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
QAX33955.1\|28509_28791_-	hypothetical protein	NA	NA	NA	NA
QAX33956.1\|29177_29882_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAX33957.1\|29993_30152_-	Hok/Gef family protein	NA	NA	NA	NA
QAX33958.1\|30250_31620_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5

DBSCAN-SWA_2

67619 : 109725

Escherichia_phage(46.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX33997.1\|67619_68892_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
QAX33998.1\|68946_69129_+	hypothetical protein	NA	NA	NA	NA
QAX33999.1\|69186_69468_-	hypothetical protein	NA	NA	NA	NA
QAX34000.1\|69448_69910_-	hypothetical protein	NA	NA	NA	NA
QAX34001.1\|70131_71823_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	7.6e-67	31.0
QAX34002.1\|72070_73234_-	DNA-binding protein	A0A1P8DTT7	Salmonella_phage	1.3e-17	32.1
QAX34003.1\|74245_74950_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAX34176.1\|74979_75684_+	RepB family plasmid replication initiator protein	I3WF20	Macacine_betaherpesvirus	6.4e-20	28.7
QAX34004.1\|75808_76186_+	hypothetical protein	NA	NA	NA	NA
QAX34005.1\|77695_78400_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAX34006.1\|79388_79640_+	plasmid stabilization protein	NA	NA	NA	NA
QAX34007.1\|79629_79911_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	2.9e-24	62.4
QAX34177.1\|80149_80338_-	hypothetical protein	A0A077SL39	Escherichia_phage	8.8e-09	96.7
QAX34008.1\|80407_81607_-\|transposase	IS91 family transposase	NA	NA	NA	NA
QAX34009.1\|81616_81805_-	hypothetical protein	NA	NA	NA	NA
QAX34010.1\|83383_84178_+	aminoglycoside O-phosphotransferase APH(3')-IIa	Q75ZG1	Hepacivirus	9.5e-153	100.0
QAX34011.1\|84484_85189_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAX34012.1\|85293_85650_-	hypothetical protein	NA	NA	NA	NA
QAX34013.1\|85595_86180_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAX34014.1\|86179_87418_-	MFS transporter	NA	NA	NA	NA
QAX34015.1\|87414_88320_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
QAX34016.1\|88441_89146_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX34017.1\|89344_89668_-	ArsR family transcriptional regulator	NA	NA	NA	NA
QAX34018.1\|89772_90810_+	permease	NA	NA	NA	NA
QAX34019.1\|93745_94336_-	hypothetical protein	NA	NA	NA	NA
QAX34020.1\|94335_94593_-	hypothetical protein	NA	NA	NA	NA
QAX34021.1\|94946_97085_+	AAA family ATPase	NA	NA	NA	NA
QAX34022.1\|97662_97893_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
QAX34178.1\|97834_98008_-	toxin-antitoxin system, antitoxin component, AbrB family protein	NA	NA	NA	NA
QAX34023.1\|98188_98479_+	hypothetical protein	NA	NA	NA	NA
QAX34024.1\|98468_99368_+	hypothetical protein	NA	NA	NA	NA
QAX34025.1\|99417_101643_-	phage T7 exclusion protein	NA	NA	NA	NA
QAX34026.1\|101644_102733_-	transcriptional regulator	NA	NA	NA	NA
QAX34027.1\|103284_103635_+	hypothetical protein	NA	NA	NA	NA
QAX34028.1\|103855_104560_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
QAX34029.1\|106131_106311_+	hypothetical protein	NA	NA	NA	NA
QAX34030.1\|106426_107071_-	resolvase	A0A1V0E035	Clostridioides_phage	9.8e-07	28.3
QAX34031.1\|107365_107986_+	chromosome partitioning protein ParA	A2I303	Vibrio_virus	6.3e-19	33.8
QAX34032.1\|108037_108268_+	DNA partition complex ParG	NA	NA	NA	NA
QAX34033.1\|109020_109725_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_3

198822 : 246900

Escherichia_phage(36.36%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX34117.1\|198822_199527_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX34118.1\|201331_202009_-	TetR family transcriptional regulator	NA	NA	NA	NA
QAX34119.1\|202087_203287_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
QAX34120.1\|203318_204203_-	EamA family transporter	NA	NA	NA	NA
QAX34181.1\|204340_204733_-	cysteine hydrolase	NA	NA	NA	NA
QAX34182.1\|206597_206948_+	hypothetical protein	NA	NA	NA	NA
QAX34183.1\|207324_207642_+	hypothetical protein	NA	NA	NA	NA
QAX34121.1\|207692_208100_-	hypothetical protein	NA	NA	NA	NA
QAX34122.1\|208129_208591_-	hypothetical protein	NA	NA	NA	NA
QAX34123.1\|208927_209158_-	hypothetical protein	NA	NA	NA	NA
QAX34124.1\|209194_209482_-	hypothetical protein	NA	NA	NA	NA
QAX34125.1\|209519_209774_-	hypothetical protein	NA	NA	NA	NA
QAX34184.1\|209819_210053_-	hypothetical protein	NA	NA	NA	NA
QAX34126.1\|210274_211171_-	hypothetical protein	NA	NA	NA	NA
QAX34127.1\|211173_211689_-	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
QAX34128.1\|211903_213331_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
QAX34129.1\|213581_214901_+	DUF1173 family protein	NA	NA	NA	NA
QAX34130.1\|214913_215117_+	hypothetical protein	NA	NA	NA	NA
QAX34131.1\|215180_216386_-	ATP/GTP-binding protein	NA	NA	NA	NA
QAX34132.1\|216382_217201_-	DUF4942 domain-containing protein	NA	NA	NA	NA
QAX34133.1\|217843_218224_+	hypothetical protein	NA	NA	NA	NA
QAX34134.1\|218281_218947_+	hypothetical protein	NA	NA	NA	NA
QAX34135.1\|219006_219462_+	hypothetical protein	NA	NA	NA	NA
QAX34136.1\|219503_219740_+	hypothetical protein	NA	NA	NA	NA
QAX34137.1\|219775_220060_+	hypothetical protein	NA	NA	NA	NA
QAX34138.1\|220237_220642_+	DNA-binding protein	NA	NA	NA	NA
QAX34139.1\|220717_220897_+	hypothetical protein	NA	NA	NA	NA
QAX34140.1\|220983_221187_-	hypothetical protein	NA	NA	NA	NA
QAX34141.1\|222217_223204_+	hypothetical protein	NA	NA	NA	NA
QAX34142.1\|223200_225240_+	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	2.5e-24	24.8
QAX34143.1\|225242_225488_-	hypothetical protein	NA	NA	NA	NA
QAX34144.1\|225552_225852_-	hypothetical protein	NA	NA	NA	NA
QAX34145.1\|226600_227026_-	hypothetical protein	NA	NA	NA	NA
QAX34146.1\|227279_228095_-	HNH endonuclease	G0X580	Salmonella_phage	1.1e-15	36.5
QAX34147.1\|228107_228518_-	hypothetical protein	NA	NA	NA	NA
QAX34148.1\|228619_228826_-	hypothetical protein	NA	NA	NA	NA
QAX34149.1\|228886_230212_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
QAX34185.1\|230216_230510_-	XRE family transcriptional regulator	NA	NA	NA	NA
QAX34150.1\|230809_231514_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX34151.1\|231631_231835_-	hypothetical protein	NA	NA	NA	NA
QAX34152.1\|231853_232033_+	hypothetical protein	NA	NA	NA	NA
QAX34153.1\|231962_232802_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
QAX34154.1\|232795_233143_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
QAX34155.1\|233365_233818_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
QAX34156.1\|233902_234535_-	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
QAX34186.1\|234672_235503_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
QAX34187.1\|235633_236188_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
QAX34157.1\|236331_237036_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX34158.1\|237149_237926_+	AAC(3)-VI family aminoglycoside N-acetyltransferase	NA	NA	NA	NA
QAX34159.1\|237946_238168_+	hypothetical protein	NA	NA	NA	NA
QAX34160.1\|238154_239180_+	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
QAX34161.1\|239601_240354_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
QAX34162.1\|242164_242650_+	phenol hydroxylase	NA	NA	NA	NA
QAX34163.1\|242846_243937_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
QAX34164.1\|244026_244842_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
QAX34165.1\|244928_245231_+	phosphoglucosamine mutase	NA	NA	NA	NA
QAX34166.1\|245124_245376_-	hypothetical protein	NA	NA	NA	NA
QAX34167.1\|245406_246900_-\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP033356

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP033353

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection