CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	1 crisprs	cas3,csa3,RT,DEDDh,DinG,WYL	0	0	5	0
CP026158	Klebsiella pneumoniae strain F93-2 plasmid pF93-2_1, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP026157_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026157_1

4278244-4278338

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP026157_1

>merge|CP026157|1|4278244-4278338|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP026157|1|1|4278244-4278338|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP026157.1\|QAX02256.1\|4267362_4268865_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP026157.1\|QAX02272.1\|4288883_4289363_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
CP026157.1\|QAX02259.1\|4272418_4275325_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP026157.1\|QAX02267.1\|4284299_4285586_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP026157.1\|QAX02263.1\|4278479_4280105_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP026157.1\|QAX02269.1\|4286577_4287399_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP026157.1\|QAX02258.1\|4269873_4272231_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP026157.1\|QAX02261.1\|4276071_4276611_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP026157.1\|QAX02257.1\|4269002_4269698_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP026157.1\|QAX02254.1\|4264459_4265305_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP026157.1\|QAX02266.1\|4281896_4284245_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP026157.1\|QAX02260.1\|4275337_4275997_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP026157.1\|QAX02270.1\|4287401_4287779_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP026157.1\|QAX02264.1\|4280094_4280793_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP026157.1\|QAX02271.1\|4287783_4288632_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP026157.1\|QAX03170.1\|4276573_4276762_+\|hypothetical-protein	unknown	unknown	unknown
CP026157.1\|QAX02255.1\|4265642_4267352_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP026157.1\|QAX02262.1\|4276790_4278155_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP026157.1\|QAX02268.1\|4285591_4286581_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP026157.1\|QAX02265.1\|4280825_4281653_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512

Protein	Function_ID	Function_description	E-value
CP026157.1\|QAX02256.1\|4267362_4268865_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP026157.1\|QAX02272.1\|4288883_4289363_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
CP026157.1\|QAX02259.1\|4272418_4275325_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP026157.1\|QAX02267.1\|4284299_4285586_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP026157.1\|QAX02263.1\|4278479_4280105_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	2.22281e-172
CP026157.1\|QAX02269.1\|4286577_4287399_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP026157.1\|QAX02261.1\|4276071_4276611_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP026157.1\|QAX02257.1\|4269002_4269698_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP026157.1\|QAX02254.1\|4264459_4265305_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP026157.1\|QAX02266.1\|4281896_4284245_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP026157.1\|QAX02260.1\|4275337_4275997_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.5539e-160
CP026157.1\|QAX02270.1\|4287401_4287779_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP026157.1\|QAX02264.1\|4280094_4280793_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP026157.1\|QAX02271.1\|4287783_4288632_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP026157.1\|QAX02258.1\|4269873_4272231_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP026157.1\|QAX02255.1\|4265642_4267352_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP026157.1\|QAX02262.1\|4276790_4278155_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP026157.1\|QAX02268.1\|4285591_4286581_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP026157.1\|QAX02265.1\|4280825_4281653_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164

>CP026157.1|QAX02262.1|4276790_4278155_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP026157.1|QAX03170.1|4276573_4276762_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFRSGK
>CP026157.1|QAX02261.1|4276071_4276611_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP026157.1|QAX02260.1|4275337_4275997_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVALVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP026157.1|QAX02259.1|4272418_4275325_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP026157.1|QAX02258.1|4269873_4272231_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDALRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRTQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP026157.1|QAX02257.1|4269002_4269698_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP026157.1|QAX02256.1|4267362_4268865_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP026157.1|QAX02255.1|4265642_4267352_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALCEQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>CP026157.1|QAX02254.1|4264459_4265305_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP026157.1|QAX02263.1|4278479_4280105_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLELSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>CP026157.1|QAX02264.1|4280094_4280793_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP026157.1|QAX02265.1|4280825_4281653_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP026157.1|QAX02266.1|4281896_4284245_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP026157.1|QAX02267.1|4284299_4285586_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP026157.1|QAX02268.1|4285591_4286581_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPGQPPVPQRAGTLTLLNVALNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP026157.1|QAX02269.1|4286577_4287399_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP026157.1|QAX02270.1|4287401_4287779_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP026157.1|QAX02271.1|4287783_4288632_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP026157.1|QAX02272.1|4288883_4289363_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1373829 : 1464183

Enterobacteria_phage(20.83%)

portal,terminase,holin,integrase,transposase,tail,tRNA

attL 1396828:1396852|attR 1441429:1441453

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAW99645.1\|1373829_1375248_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
QAW99646.1\|1375299_1375692_-	hypothetical protein	NA	NA	NA	NA
QAW99647.1\|1375695_1376049_-	hypothetical protein	NA	NA	NA	NA
QAW99648.1\|1376670_1378842_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
QAW99649.1\|1378890_1380093_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA
QAW99650.1\|1380439_1381681_+	divalent metal cation transporter	NA	NA	NA	NA
QAW99651.1\|1381738_1382092_-	DUF2502 domain-containing protein	NA	NA	NA	NA
QAW99652.1\|1382222_1383215_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
QAX03032.1\|1383395_1385057_+	indolepyruvate decarboxylase	NA	NA	NA	NA
QAW99653.1\|1385053_1386289_-	ion channel protein	NA	NA	NA	NA
QAW99654.1\|1386552_1387518_+	glucokinase	NA	NA	NA	NA
QAX03033.1\|1387571_1388309_-	DNA-binding response regulator	A0A2R2ZGH8	Clostridioides_phage	1.5e-14	26.3
QAW99655.1\|1388320_1390018_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-47	28.5
QAW99656.1\|1390126_1390312_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA
QAW99657.1\|1390400_1391615_+	alanine transaminase	NA	NA	NA	NA
QAX03034.1\|1391685_1391757_-	membrane protein YpdK	NA	NA	NA	NA
QAW99658.1\|1392095_1393292_-	cyanate transporter	NA	NA	NA	NA
QAW99659.1\|1393288_1393747_-	nucleoside deaminase	A0A0B5J096	Pandoravirus	7.2e-12	33.1
QAW99660.1\|1393879_1394788_+	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2
QAW99661.1\|1394797_1395679_-	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
QAW99662.1\|1396045_1396528_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
1396828:1396852	attL	NA	NA	NA	NA
QAW99663.1\|1397046_1398216_+\|integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	1.9e-202	86.1
QAW99664.1\|1398252_1399242_+	hypothetical protein	NA	NA	NA	NA
QAW99665.1\|1399263_1399455_-	hypothetical protein	A0A2R2Z2X2	Escherichia_phage	1.3e-12	60.0
QAX03035.1\|1399465_1399900_-	DUF550 domain-containing protein	A0A1V0E5L6	Salmonella_phage	3.6e-13	47.7
QAW99666.1\|1400147_1400372_-	hypothetical protein	S4TVX5	Salmonella_phage	1.4e-13	52.3
QAW99667.1\|1400368_1400497_-\|integrase	integrase	NA	NA	NA	NA
QAW99668.1\|1400686_1401547_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	1.8e-72	54.3
QAW99669.1\|1401628_1402441_-	hypothetical protein	NA	NA	NA	NA
QAW99670.1\|1402482_1402842_-	hypothetical protein	NA	NA	NA	NA
QAW99671.1\|1403288_1403801_+	hypothetical protein	NA	NA	NA	NA
QAX03036.1\|1403903_1404977_-	(p)ppGpp synthetase	A0A1B0VBT5	Salmonella_phage	2.7e-54	39.3
QAW99672.1\|1405690_1405927_+	hypothetical protein	NA	NA	NA	NA
QAW99673.1\|1405948_1406722_-	hypothetical protein	NA	NA	NA	NA
QAX03037.1\|1406953_1407658_-	hypothetical protein	G8C7U1	Escherichia_phage	3.2e-67	59.2
QAW99674.1\|1407763_1408024_+	hypothetical protein	A0A1B5FPK9	Escherichia_phage	1.6e-08	40.6
QAW99675.1\|1408052_1408583_+	DNA-binding protein	A0A1C9II13	Salmonella_phage	6.1e-55	62.4
QAW99676.1\|1408625_1408904_+	hypothetical protein	NA	NA	NA	NA
QAW99677.1\|1409066_1409342_+	hypothetical protein	NA	NA	NA	NA
QAW99678.1\|1409334_1410864_+	helicase	A0A286N2P9	Klebsiella_phage	5.6e-202	66.5
QAW99679.1\|1410860_1411832_+	DNA primase	A0A286N2Q0	Klebsiella_phage	1.7e-108	60.7
QAX03038.1\|1411801_1412446_+	NinG family protein	A0A1W6JNX3	Morganella_phage	1.9e-39	54.3
QAW99680.1\|1412442_1413084_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	1.9e-82	69.8
QAW99681.1\|1413080_1413659_+	hypothetical protein	A0A0U2S606	Escherichia_phage	5.8e-51	57.2
QAW99682.1\|1413745_1414030_+	hypothetical protein	NA	NA	NA	NA
QAW99683.1\|1414164_1414509_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	4.5e-35	66.1
QAW99684.1\|1414492_1414972_+	lysozyme	A0A0M4R365	Salmonella_phage	1.4e-58	71.1
QAW99685.1\|1415153_1415336_-	hypothetical protein	NA	NA	NA	NA
QAW99686.1\|1415586_1415811_+	hypothetical protein	A0A2H4J182	uncultured_Caudovirales_phage	2.2e-22	70.3
QAW99687.1\|1415875_1416121_+	DUF2560 domain-containing protein	A0A286N2R1	Klebsiella_phage	3.0e-33	96.3
QAX03039.1\|1416398_1416608_+	hypothetical protein	NA	NA	NA	NA
QAW99688.1\|1416674_1416860_+	hypothetical protein	Q8W634	Enterobacteria_phage	2.4e-11	61.1
QAW99689.1\|1417181_1417673_+\|terminase	terminase	K7PJY2	Enterobacterial_phage	7.1e-66	82.8
QAW99690.1\|1417672_1419781_+	DNA packaging protein	K7PH52	Enterobacterial_phage	0.0e+00	83.3
QAW99691.1\|1419777_1419993_+	hypothetical protein	A5LH28	Enterobacteria_phage	2.9e-24	75.7
QAW99692.1\|1419989_1421489_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	9.5e-247	83.4
QAW99693.1\|1421433_1423449_+	peptidase S14	K7PKX4	Enterobacterial_phage	0.0e+00	81.8
QAW99694.1\|1423529_1423856_+	recombinase RecA	K7PJY3	Enterobacterial_phage	2.3e-33	66.4
QAW99695.1\|1423848_1424142_+	ATP-binding protein	NA	NA	NA	NA
QAW99696.1\|1424131_1424683_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	5.3e-54	67.9
QAW99697.1\|1424679_1425078_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.2e-39	57.0
QAW99698.1\|1425085_1425568_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	2.6e-60	69.2
QAW99699.1\|1425610_1426006_+\|tail	phage tail protein	M9NZD7	Enterobacteria_phage	1.1e-08	28.2
QAW99700.1\|1426026_1426344_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.4e-19	51.5
QAW99701.1\|1426324_1429021_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	2.0e-202	63.0
QAW99702.1\|1429020_1429494_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.7e-53	63.5
QAW99703.1\|1429480_1429963_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.5e-56	68.4
QAW99704.1\|1429970_1430357_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
QAW99705.1\|1430353_1433422_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	66.5
QAW99706.1\|1435540_1436410_+	hypothetical protein	A0A2H4N7C5	Pectobacterium_phage	2.1e-12	26.6
QAW99707.1\|1437050_1437473_+	hypothetical protein	K7P834	Enterobacteria_phage	4.7e-26	45.3
QAW99708.1\|1437884_1438124_+	DNA polymerase V	I6PD82	Cronobacter_phage	7.5e-21	54.4
QAW99709.1\|1438126_1438450_+	hypothetical protein	K7PGV5	Enterobacterial_phage	8.0e-26	52.0
QAW99710.1\|1439684_1440796_-\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	4.4e-07	30.4
QAW99711.1\|1440891_1441182_+	hypothetical protein	NA	NA	NA	NA
QAW99712.1\|1441541_1442471_-	hypothetical protein	E7DYY8	Enterobacteria_phage	6.7e-134	81.4
1441429:1441453	attR	NA	NA	NA	NA
QAW99713.1\|1442760_1443522_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
QAW99714.1\|1443583_1444912_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
QAW99715.1\|1445279_1445564_+	DUF406 domain-containing protein	NA	NA	NA	NA
QAW99716.1\|1445723_1447034_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
QAW99717.1\|1447033_1449178_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
QAW99718.1\|1449387_1449873_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
QAW99719.1\|1449893_1450445_-	endonuclease SmrB	NA	NA	NA	NA
QAW99720.1\|1450612_1451545_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
QAW99721.1\|1451586_1452672_+	chorismate synthase	A0A291AU41	Pandoravirus	7.7e-89	46.6
QAW99722.1\|1452674_1453499_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
QAW99723.1\|1453498_1454308_+	hypothetical protein	NA	NA	NA	NA
QAW99724.1\|1454307_1454856_+	elongation factor P hydroxylase	NA	NA	NA	NA
QAX03040.1\|1454887_1455169_+	YfcL family protein	NA	NA	NA	NA
QAX03041.1\|1455230_1457219_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
QAW99725.1\|1457377_1458598_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA
QAW99726.1\|1458807_1459983_+	arabinose transporter	NA	NA	NA	NA
QAW99727.1\|1460069_1461047_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
QAX03042.1\|1461181_1462294_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	2.1e-20	27.9
QAW99728.1\|1462357_1463371_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
QAW99729.1\|1463370_1464183_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_2

1662960 : 1669866

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX03049.1\|1662960_1663824_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
QAW99899.1\|1663834_1664608_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-25	36.3
QAX03050.1\|1664849_1665743_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
QAW99900.1\|1665988_1667350_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
QAW99901.1\|1667668_1668391_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
QAW99902.1\|1668387_1669866_-	two-component system sensor histidine kinase BaeA	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2652289 : 2661818

Escherichia_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX00811.1\|2652289_2655397_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.7
QAX00812.1\|2655451_2656717_+	MFS transporter	NA	NA	NA	NA
QAX00813.1\|2656747_2657836_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
QAX00814.1\|2657922_2658183_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
QAX00815.1\|2658480_2659341_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
QAX00816.1\|2659361_2660123_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
QAX00817.1\|2660383_2661205_+	hypothetical protein	A0A077SLF7	Escherichia_phage	2.0e-97	99.5
QAX00818.1\|2661197_2661818_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

3311943 : 3321417

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX01409.1\|3311943_3313665_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
QAX01410.1\|3313709_3314411_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
QAX01411.1\|3314764_3314983_+	translation initiation factor IF-1	NA	NA	NA	NA
QAX01412.1\|3315113_3317393_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
QAX01413.1\|3317423_3317741_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
QAX01414.1\|3318066_3318288_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
QAX01415.1\|3318221_3318425_-	hypothetical protein	NA	NA	NA	NA
QAX01416.1\|3318364_3320305_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
QAX01417.1\|3320301_3321417_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_5

4015552 : 4023809

Enterobacteria_phage(50.0%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX02040.1\|4015552_4016806_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.8e-89	45.1
QAX02041.1\|4017161_4018376_+	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	1.3e-132	56.0
QAX02042.1\|4018444_4019041_+	hypothetical protein	NA	NA	NA	NA
QAX02043.1\|4019208_4019412_+	AlpA family transcriptional regulator	E5E3Y1	Burkholderia_phage	2.6e-06	45.3
QAX02044.1\|4019538_4019982_-	hypothetical protein	NA	NA	NA	NA
QAX02045.1\|4020039_4020219_-	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	2.6e-10	56.9
QAX02046.1\|4020348_4020537_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
QAX02047.1\|4020529_4021405_+\|integrase	integrase	NA	NA	NA	NA
QAX02048.1\|4021520_4021724_+	hypothetical protein	K7PHG9	Enterobacteria_phage	3.4e-14	56.5
QAX02049.1\|4021734_4022049_+	DUF4222 domain-containing protein	NA	NA	NA	NA
QAX02050.1\|4022045_4023809_+	DNA primase	Q7M2A8	Enterobacteria_phage	2.5e-105	43.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP026158

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7650 : 43918

Escherichia_phage(40.0%)

transposase,integrase,holin,protease

attL 8394:8408|attR 26410:26424

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
QAX03215.1\|7650_8355_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
8394:8408	attL	NA	NA	NA	NA
QAX03216.1\|8543_9419_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
QAX03217.1\|9465_9798_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
QAX03218.1\|9814_12607_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	99.9
QAX03219.1\|14059_14716_+	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
QAX03220.1\|15495_16887_-\|transposase	ISKra4 family transposase ISKpn19	NA	NA	NA	NA
QAX03221.1\|16923_17496_-	recombinase family protein	M9Q1K0	Clostridium_phage	3.4e-19	39.4
QAX03222.1\|17632_18223_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
QAX03223.1\|18279_18474_-	addiction module toxin RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.1e-14	66.7
QAX03224.1\|18473_18713_-	type II toxin-antitoxin system antitoxin, RelB/DinJ family	A0A2H4JBG1	uncultured_Caudovirales_phage	2.0e-18	54.4
QAX03225.1\|19087_21091_+\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	2.2e-20	25.9
QAX03226.1\|21154_22432_+	DUF2254 domain-containing protein	NA	NA	NA	NA
QAX03227.1\|22786_22984_+	hypothetical protein	NA	NA	NA	NA
QAX03228.1\|23048_24479_+	hypothetical protein	NA	NA	NA	NA
QAX03229.1\|24619_25222_+\|integrase	integrase	A3F636	Streptococcus_phage	3.6e-11	30.5
QAX03230.1\|25318_26128_-	chaperonin	A0A0F7L9X0	Escherichia_phage	2.1e-155	94.8
QAX03231.1\|26473_27178_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
26410:26424	attR	NA	NA	NA	NA
QAX03232.1\|28371_28914_-	tunicamycin resistance protein	NA	NA	NA	NA
QAX03233.1\|28926_29787_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
QAX03234.1\|29893_30598_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX03235.1\|30719_31625_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
QAX03236.1\|31621_32860_+	MFS transporter	NA	NA	NA	NA
QAX03237.1\|32859_33444_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
QAX03238.1\|33389_33746_+	hypothetical protein	NA	NA	NA	NA
QAX03239.1\|33936_34701_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
QAX03240.1\|34729_34912_+	resolvase	NA	NA	NA	NA
QAX03241.1\|34927_35233_-	PadR family transcriptional regulator	NA	NA	NA	NA
QAX03242.1\|35243_36449_-	chromate transporter	NA	NA	NA	NA
QAX03243.1\|36604_36808_-	hypothetical protein	NA	NA	NA	NA
QAX03244.1\|36826_37006_+	hypothetical protein	NA	NA	NA	NA
QAX03245.1\|36935_37775_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
QAX03246.1\|37768_38116_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
QAX03247.1\|38321_39110_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
QAX03319.1\|39240_39714_-	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
QAX03248.1\|40565_41270_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
QAX03249.1\|42479_42584_-	hypothetical protein	NA	NA	NA	NA
QAX03250.1\|42580_43045_-	mRNA interferase PemK	NA	NA	NA	NA
QAX03251.1\|43264_43918_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026157

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP026158

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection