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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP034097 Acinetobacter baumannii strain A52 plasmid pA52-OXA-72, complete sequence 0 crisprs NA 0 0 0 0
CP034096 Acinetobacter baumannii strain A52 plasmid pA52-4, complete sequence 0 crisprs NA 0 0 0 0
CP034095 Acinetobacter baumannii strain A52 plasmid pA52-3, complete sequence 0 crisprs NA 0 0 0 0
CP034093 Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence 0 crisprs DEDDh 0 0 3 0
CP034092 Acinetobacter baumannii strain A52 chromosome, complete genome 2 crisprs cas3,DEDDh,WYL,csa3,RT 0 1 5 0
CP034094 Acinetobacter baumannii strain A52 plasmid pA52-2, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP034092
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP034092_1 664196-664280 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP034092_2 1941979-1942060 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP012711 Psychrobacter urativorans strain R310.10B plasmid 5, complete sequence 43400-43435 3 0.917
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024448 Moraxella osloensis strain NP7 plasmid pNP7-5, complete sequence 20098-20133 4 0.889
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024446 Moraxella osloensis strain NP7 plasmid pNP7-3, complete sequence 63667-63702 5 0.861
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024445 Moraxella osloensis strain NP7 plasmid pNP7-2, complete sequence 29619-29654 6 0.833
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024186 Moraxella osloensis strain TT16 plasmid p1, complete sequence 95169-95204 6 0.833
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024186 Moraxella osloensis strain TT16 plasmid p1, complete sequence 29226-29261 6 0.833
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024177 Moraxella osloensis strain YHS plasmid pYHS1, complete sequence 95137-95172 6 0.833
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024177 Moraxella osloensis strain YHS plasmid pYHS1, complete sequence 29194-29229 6 0.833
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024186 Moraxella osloensis strain TT16 plasmid p1, complete sequence 25313-25348 8 0.778
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024177 Moraxella osloensis strain YHS plasmid pYHS1, complete sequence 25281-25316 8 0.778
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP040258 Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence 46821-46856 8 0.778
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024446 Moraxella osloensis strain NP7 plasmid pNP7-3, complete sequence 38673-38708 9 0.75
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_AP017383 Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence 53808-53843 9 0.75
CP034092_2 2.1|1942002|36|CP034092|CRISPRCasFinder 1942002-1942037 36 NZ_CP024183 Moraxella osloensis strain KSH plasmid p3, complete sequence 11703-11738 9 0.75

1. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP012711 (Psychrobacter urativorans strain R310.10B plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.917

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
tcccactcgagcacagctctcgtcttgggctcgggc	Protospacer
*.************************* *******.

2. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024448 (Moraxella osloensis strain NP7 plasmid pNP7-5, complete sequence) position: , mismatch: 4, identity: 0.889

ttccact-cgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
-tccactacgagcatagctctcgccttgcgctcgggc	Protospacer
 ****** ******.********.************.

3. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024446 (Moraxella osloensis strain NP7 plasmid pNP7-3, complete sequence) position: , mismatch: 5, identity: 0.861

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcccactcgagcatagctctcgccttgcgctcgggc	Protospacer
 .***********.********.************.

4. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024445 (Moraxella osloensis strain NP7 plasmid pNP7-2, complete sequence) position: , mismatch: 6, identity: 0.833

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
aatcactcgagcacagctctcgccttgcactcgggc	Protospacer
  .*******************.*****.******.

5. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024186 (Moraxella osloensis strain TT16 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.833

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
aatcactcgagcacagctctcgccttgcactcgggc	Protospacer
  .*******************.*****.******.

6. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024186 (Moraxella osloensis strain TT16 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.833

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcctactcgagcatagctctcgccttgcgctcgggc	Protospacer
 .*.*********.********.************.

7. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024177 (Moraxella osloensis strain YHS plasmid pYHS1, complete sequence) position: , mismatch: 6, identity: 0.833

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
aatcactcgagcacagctctcgccttgcactcgggc	Protospacer
  .*******************.*****.******.

8. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024177 (Moraxella osloensis strain YHS plasmid pYHS1, complete sequence) position: , mismatch: 6, identity: 0.833

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcctactcgagcatagctctcgccttgcgctcgggc	Protospacer
 .*.*********.********.************.

9. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024186 (Moraxella osloensis strain TT16 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.778

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcccactcgagcatagctctcgccttgcgtcggggc	Protospacer
 .***********.********.******.. ***.

10. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024177 (Moraxella osloensis strain YHS plasmid pYHS1, complete sequence) position: , mismatch: 8, identity: 0.778

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcccactcgagcatagctctcgccttgcgtcggggc	Protospacer
 .***********.********.******.. ***.

11. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP040258 (Moraxella osloensis strain MOXF1 plasmid pMOXF1, complete sequence) position: , mismatch: 8, identity: 0.778

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
ccccactcgagcatagctctcgccttgcgtcggggc	Protospacer
..***********.********.******.. ***.

12. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024446 (Moraxella osloensis strain NP7 plasmid pNP7-3, complete sequence) position: , mismatch: 9, identity: 0.75

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gctcactcgagcatagctctcgccttgcgtcggggc	Protospacer
 ..**********.********.******.. ***.

13. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_AP017383 (Moraxella osloensis strain KMC41 plasmid pMOSL2, complete sequence) position: , mismatch: 9, identity: 0.75

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcccactcgagcatagctctcgccttgcgtcgcggc	Protospacer
 .***********.********.******..  **.

14. spacer 2.1|1942002|36|CP034092|CRISPRCasFinder matches to NZ_CP024183 (Moraxella osloensis strain KSH plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.75

ttccactcgagcacagctctcgtcttgcgctcgggt	CRISPR spacer
gcccactcgagcatagctctcgccttgcgtcgcggc	Protospacer
 .***********.********.******..  **.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1007361 : 1012253 10 Acinetobacter_phage(71.43%) NA NA
DBSCAN-SWA_2 1015422 : 1037813 19 Acinetobacter_phage(35.71%) NA NA
DBSCAN-SWA_3 1163517 : 1178324 10 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_4 1421579 : 1461689 52 Acinetobacter_phage(71.79%) tail,head,terminase NA
DBSCAN-SWA_5 2702202 : 2738789 42 Acinetobacter_phage(74.19%) tail,transposase,head NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP034093
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 78401 76 Pseudomonas_phage(29.27%) capsid,integrase,tail,terminase attL 20456:20474|attR 61668:61686
DBSCAN-SWA_2 92770 : 100661 7 Enterobacteria_phage(40.0%) NA NA
DBSCAN-SWA_3 103888 : 109351 9 Pseudomonas_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage