CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP022411	Pseudomonas sp. RU47 chromosome, complete genome	5 crisprs	DEDDh,csa3,DinG,cas3,WYL	0	1	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP022411_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022411_2

1267188-1267294

Orphan

Consensus_repeat	Method
TTTTTTGCAGATGTACGCAATCCAACTGTAGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022411_2

>merge|CP022411|2|1267188-1267294|CRISPRCasFinder
TTTTTTGCAGATGTACGCAATCCAACTGTAGGAGCGAGCTTGCTCGCGAAGGCGGCCTGACAGCCGACCTATTTTTTTTGCAGATGTACGCAATCCAAATGTAGGAG

>CP022411|2|2|1267188-1267294|CRISPRCasFinder
TTTTTTGCAGATGTACGCAATCCAACTGTAGGAG	CGAGCTTGCTCGCGAAGGCGGCCTGACAGCCGACCTATT
TTTTTTGCAGATGTACGCAATCCAAATGTAGGAG

Protein	Signature genes	Signature genes Name	Protein_function
CP022411.1\|AZZ74625.1\|1273686_1274496_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|236841
CP022411.1\|AZZ74626.1\|1274495_1275647_-\|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl\|CDD\|237265
CP022411.1\|AZZ79249.1\|1260946_1261729_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377360
CP022411.1\|AZZ74619.1\|1267538_1268930_+\|cell-filamentation-protein-Fic	unknown	unknown	gnl\|CDD\|225718
CP022411.1\|AZZ74620.1\|1268926_1269616_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379394
CP022411.1\|AZZ74622.1\|1270172_1272674_-\|glycerol-3-phosphate-1-O-acyltransferase	unknown	unknown	gnl\|CDD\|235325
CP022411.1\|AZZ74616.1\|1261834_1262470_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
CP022411.1\|AZZ74613.1\|1258698_1259535_+\|2-methylisocitrate-lyase	unknown	unknown	gnl\|CDD\|379346
CP022411.1\|AZZ74614.1\|1259537_1260230_+\|extensin	unknown	unknown	gnl\|CDD\|369129
CP022411.1\|AZZ74624.1\|1273233_1273611_-\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ74610.1\|1256605_1257280_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
CP022411.1\|AZZ74618.1\|1263671_1266740_+\|multidrug-transporter-AcrB	unknown	unknown	gnl\|CDD\|223911
CP022411.1\|AZZ74617.1\|1262564_1263665_+\|efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
CP022411.1\|AZZ74627.1\|1275886_1278478_-\|beta-(1-3)-glucosyl-transferase	unknown	unknown	gnl\|CDD\|133057
CP022411.1\|AZZ74628.1\|1278691_1279510_+\|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA	unknown	unknown	gnl\|CDD\|224100
CP022411.1\|AZZ74612.1\|1257805_1258666_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182366
CP022411.1\|AZZ74623.1\|1272912_1273122_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
CP022411.1\|AZZ74621.1\|1269643_1270042_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378225
CP022411.1\|AZZ74611.1\|1257494_1257806_+\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ74615.1\|1260233_1260854_-\|energy-transducer-TonB	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP022411.1\|AZZ74625.1\|1273686_1274496_-\|SAM-dependent-methyltransferase	gnl\|CDD\|236841	PRK11088, rrmA, 23S rRNA methyltransferase A; Provisional.	1.56553e-87
CP022411.1\|AZZ79249.1\|1260946_1261729_+\|SAM-dependent-methyltransferase	gnl\|CDD\|377360	pfam04445, SAM_MT, Putative SAM-dependent methyltransferase. This is a family of putative SAM-dependent methyltransferases.	3.07143e-122
CP022411.1\|AZZ74619.1\|1267538_1268930_+\|cell-filamentation-protein-Fic	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.56826e-36
CP022411.1\|AZZ74626.1\|1274495_1275647_-\|succinyl-diaminopimelate-desuccinylase	gnl\|CDD\|237265	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed.	0
CP022411.1\|AZZ74622.1\|1270172_1272674_-\|glycerol-3-phosphate-1-O-acyltransferase	gnl\|CDD\|235325	PRK04974, PRK04974, glycerol-3-phosphate 1-O-acyltransferase PlsB.	0
CP022411.1\|AZZ74616.1\|1261834_1262470_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	3.14412e-33
CP022411.1\|AZZ74613.1\|1258698_1259535_+\|2-methylisocitrate-lyase	gnl\|CDD\|379346	pfam13714, PEP_mutase, Phosphoenolpyruvate phosphomutase. This domain includes the enzyme Phosphoenolpyruvate phosphomutase (EC:5.4.2.9). This protein has been characterized as catalyzing the formation of a carbon-phosphorus bond by converting phosphoenolpyruvate (PEP) to phosphonopyruvate (P-Pyr). This enzyme has a TIM barrel fold.	1.38719e-82
CP022411.1\|AZZ74614.1\|1259537_1260230_+\|extensin	gnl\|CDD\|369129	pfam06904, Extensin-like_C, Extensin-like protein C-terminus. This family represents the C-terminus (approx. 120 residues) of a number of bacterial extensin-like proteins. Extensins are cell wall glycoproteins normally associated with plants, where they strengthen the cell wall in response to mechanical stress. Note that many family members of this family are hypothetical.	6.18464e-79
CP022411.1\|AZZ74610.1\|1256605_1257280_+\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	4.01818e-72
CP022411.1\|AZZ74618.1\|1263671_1266740_+\|multidrug-transporter-AcrB	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
CP022411.1\|AZZ74617.1\|1262564_1263665_+\|efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	8.79973e-73
CP022411.1\|AZZ74627.1\|1275886_1278478_-\|beta-(1-3)-glucosyl-transferase	gnl\|CDD\|133057	cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.	5.26479e-146
CP022411.1\|AZZ74628.1\|1278691_1279510_+\|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA	gnl\|CDD\|224100	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism].	9.86783e-129
CP022411.1\|AZZ74612.1\|1257805_1258666_+\|hypothetical-protein	gnl\|CDD\|182366	PRK10302, PRK10302, hypothetical protein; Provisional.	6.4343e-79
CP022411.1\|AZZ74623.1\|1272912_1273122_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.51477e-28
CP022411.1\|AZZ74621.1\|1269643_1270042_-\|hypothetical-protein	gnl\|CDD\|378225	pfam09619, YscW, Type III secretion system lipoprotein chaperone (YscW). This entry is encoded within type III secretion operons. The protein has been characterized as a chaperone for the outer membrane pore component YscC. YscW is a lipoprotein which is itself localized to the outer membrane and, it is believed, facilitates the oligomerization and localization of YscC.	1.05192e-37
CP022411.1\|AZZ74620.1\|1268926_1269616_-\|hypothetical-protein	gnl\|CDD\|379394	pfam13852, DUF4197, Protein of unknown function (DUF4197). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 228 and 249 amino acids in length.	7.50799e-91

>CP022411.1|AZZ74618.1|1263671_1266740_+|multidrug-transporter-AcrB
MRFNLSEWALRNRQIVLFLMLLLAIVGALSYTKLGQSEDPPFTFKAMVIQTRWPGATAQEVSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFIARDSMHSKEIPDLWYQVRKKVSDIRQTLPPDIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVKDVGKVDLLGLQDEKIWVELSNVKLATLGLPLAAVQQALQEQNAVSTAGFFETGSERLQLRVSGNFQTVEEIKNFPIRVGDRTFRISDVADVRRGFNDPPAPRMRFMGEDAIGLAVAMKDGGDILVLGKALEGEFSRIQKNLPAGMQLRKVSDQPAAVKTGVGEFVQVLVEALAIVLLVSFFSLGVRTGMVVALTIPLVLAMTFACMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGFDRIRAASYAWTSTAFPMLTGTLITAAGFLPIATAQSGTGEYTRSIFQVVTIALLASWVAAVMFVPYLGEKLLPDLAKIHAAKHGTGDGQPDPYGTPFYQRVRRLVEWCVAHRKTVIVLTVGLFIASVMLFRFVPQQFFPASNRLELMVDLKLAEGASLANTTGEVKRLEAMLKDHAGIDNYVAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIEEREALRRWLIETLNEQFPALRSRVTRLENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENPHVVNVHLDWEEPSKVVYLNIDQDRARALGVSTANLAKFLQSSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLAVPTDNGRSVALSQIATLEYGFEEGIIWHRNRLPNVTVRADIYGKEQPATLVKQIMPTLDSIRAELPDGYLLDVGGTVEDSERGQKSVNAGVPMFIVVVLTLLMVQLRSFSRTAMVFLTAPLGLIGVVLFLMVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKSGLKPWQAIIEATVRRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVRREA
>CP022411.1|AZZ74617.1|1262564_1263665_+|efflux-transporter-periplasmic-adaptor-subunit
MFRHALSLALPVSLAFLLSACGQEEATQVTVRPAMVVQPEPSAQAMESYPGEVRARYEPDLAFRIGGKVSRRLVDEGQRVKADQPLAELDPQDVRLQLEATRAQVAAAEANLNLVRAERDRYKTLMDRQMVSRSAYDNAENLYRSGEARLKQIKAEFNVSTNQASYAVLRAPQDGVVAKRSVEVGQVVAAGQTVFTLATDGEREVLISLPEQSFGRFKVGQPVTVELWTQQNQRFAGQIRELSPAADPRSRTFAARISFTGGKVPAELGQSARVFVQSADSVSLSVPLSALTAENGATYVWVVNGNNTLKKTPVRIGPFGEKSVPVLEGLNASDWVVAAGVHVLLEGQQVRPVDRSNRVVNLADKE
>CP022411.1|AZZ74616.1|1261834_1262470_-|TetR-family-transcriptional-regulator
MSNNLSAPNGPGRPKDLAKRQAILDAAKILFLSHGYANTSMDAVASEAGVSKLTVYSHFNDKETLFSAAVVAKCEEQLPPLFFELPEGIAVENVLLNIARGFHHLINSDESVNLHRLIMALGSQDPKLSLIFFEAGPQRMVQGMERLLTRIHETGVLSIDLPRNAAEHFFCLIKGAGNFRLLYGCGEPLSEEAAESHIEEVVALFMRAYRP
>CP022411.1|AZZ79249.1|1260946_1261729_+|SAM-dependent-methyltransferase
MIEQPAACRIHVQALGPTFDAQAEQWAERLGLPLEVADGEFALQVGEQGLQLQQLGPDAPGPVRVDFVEGGAAHRRLYGGGSGQMIAKAVGIAQGVRPRVLDATAGLGKDAFVLASLGCEMSLIERQPLIGALLEDGLARAAEDFDVAPIVARMKLLKGNSIEVMRNWEGEPPQVIYLDPMFPHREKTALVKKEMRLFRPLVGDDPDAPALLQAALALATHRVVVKRPRKAPCIEGPKPSHALDGKSSRYDIYPKKALKP
>CP022411.1|AZZ74615.1|1260233_1260854_-|energy-transducer-TonB
MSGILPTSIGYISPHGDFSRHNTQALSGVSHLWQDFFAQALAEQTSEVVPACGTFPPVDLSSPEEPTIGSELHAHIVSQRECDVVETEVRPPEPLFLPIAEFEMDLLDKPFPPFPPEELKAQQEQQDFDSSWVRPVVINNGQPVPEPGPAPQKKPLYLPIAEFDLDLMQKPYPPFPPEEIVEQQKALDFDNGWARPIVLQNLRLAA
>CP022411.1|AZZ74614.1|1259537_1260230_+|extensin
MGRWIALSVLLIIGGALISVWRGWLDVPPEWNPWAPLDVQAAPNWLTGYKLMRLRSDPELCAQALSSSDLRVTRQSDSPDAKCPLIGALRVQGGEVALSSSFLASCPLAVAYAMFEHHTLQPTAQSVYGQKVARVDHLGSFACRNVYNRESGALSRHASADALDIAGFRLADGRTVSVLKDWPKQNQDAQFLRQVRDGACEAFSVVLSPDYNAAHRNHFHVDVGRWSVCR
>CP022411.1|AZZ74613.1|1258698_1259535_+|2-methylisocitrate-lyase
MDASALQEQTRKAHAFKVLHERPGIFVIPNPWDAGSAKMLASLGYQALATTSAGYAFSQGKADGALSLDETLANVRAIVAATDLPVAVDLENGFSDDPAEAAKSLLRAAEAGAVGGSIEDATGRADAPIYCFEHAVARIEAAVAAVRTLPFPFILTARAENYLHGNPDINDTIRRLQAFAEAGADVLYAPGLRNAEEVLAVVRAVAPKPVNVLMSGGLKLTVQELEEMGVRRISTGSALALAAFGEFFRAAEEIQQSGTFGFTSQSMPYAKANQFFKG
>CP022411.1|AZZ74612.1|1257805_1258666_+|hypothetical-protein
MDLPYYLGCPSWSENAWREYLYPVDAKTADFLGLYSQVFNAVEGNTTFYASPSPATVQRWAEVMPEHFRFTAKFPGDISHSGDLREQLTAADTFLQLLKPLGQRVSPLWLQLSKSFTPHRLPELAAFIDALDCPLAVEVRHEQFFAKGESERLLNRLLLDRGVERICLDPRALFSCLSTESSVIHAQSKKPRVPTRPAAFTQFPQVRFIGHPELEANDPFLLPWVAKIAEWIEEGRTPYIFLHTADNLLAAKLAQRFHTQLMQRLPGLPALPELYREPAAEQLDLL
>CP022411.1|AZZ74611.1|1257494_1257806_+|hypothetical-protein
MRIDGLSSQSYPIKRKPRKGNAALDESVDDIDGELEFPTEEQMAARAAAKAAAQRLSNLPARQQDMIYHRAMKKSVAMALASYLSTAGFVDWDADVLGLDLYI
>CP022411.1|AZZ74610.1|1256605_1257280_+|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MSTLLALDTATEACSVALLHDGKVTSHYEVIPRLHAQKLLPMIQQLLAGAGTTLQAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALDRPVLPVSNLAVLAQRALREYGVSQVAAAIDARMDEVYWGCYRETAGEMRLVGAEAVLPPEVAALPADASGEWFGAGTGWGYAERIAVNLSGSDAGMLPHAEDLLTLARFAWERGESIPADDAQPVYLRDKVATPKAR
>CP022411.1|AZZ74619.1|1267538_1268930_+|cell-filamentation-protein-Fic
MKKPPALKGRTDPVFDLLVRPPHKHRLEDYLALLKPLDDQGRYLPFEALRYRWAPGLDAKLCWALVKKARAAQHINLLPLGEPVQWGKYLLTPLAQKTISIVDRQASTAALEYMTSQIGERAHFSYLLNDLIEDEAIASSQLEGAATTTRVAKDMLKHQRQPRTPDERMVMGNYRMMNFAWERRYEPLSVDLIAAIHRVGVEGIDDEQYFPGVFRTNDEVVVQDGAGDTVHRPPPAAGLVSRLERLSHWINLPEDSPQETSYLHPLIKAITLHFALGYEHPFRDGNGRVARALFYWFMFKNEFAAFRYIAISLLLRNAPVKYGRSYLHTEADELDLTYFIEFQCSVIQRAVLGFTDVYRKSVGCTEEFERRLKNCGFFDQLTEKQRALYEVAKNGVAKEFTASNVAGNFACSHSEAASALDGLDELRVFERRKMGREWVFFLRNPVGGWKHGSEFLRPHVVSA
>CP022411.1|AZZ74620.1|1268926_1269616_-|hypothetical-protein
MLRPTLRFAGLCAGLMISASAMALSLSDLSQKDATGGLKDALTQGAQIAVKQLGTPGGFSNNPDVKIELPGKLGKAASKMKAFGMGAQVEELETAMNKAAESAVTQAQPILVDAVKKMSVEDAKGILSGGKDSATQYLDKSSREQIRAKFLPIVKQATDKVGVAQKYNSFAGQAAAFGVVDAKSANVENYVTEQALNGLFEMIGKQEETIRQNPAAAATSLAKKVFGTL
>CP022411.1|AZZ74621.1|1269643_1270042_-|hypothetical-protein
MKKLLTLATATLLSACQSTTPAGKVGLDGEVFYLQRIALPPSATLSVSLQDVSLADAPAVVLDEQKGPVIGQVPLPFHLSYDPAQVKPGHRYSVSARIEVNGELMFITTENHAVQLDGNDPQPLKIRVDAVR
>CP022411.1|AZZ74622.1|1270172_1272674_-|glycerol-3-phosphate-1-O-acyltransferase
MTRSPFRRLVFGTLRRLLYLWVRSETINQSSFTLNLDRSRPVFYVLQNPSLTDLAVLDTECTKAGLPRPVLPVSVGSLIEPAAFFYLTPDPDWLGRQDKRGAPPTLTRLVSALTQNAAEDAQIIPVSVFWGQSPDSENSPWKLLFADSWAVTGRLRRLLSIIVLGRKTRVQFSAPIHLRELIEHNKGHERTVRMAQRILRVHFRNLKAAVIGPDISHRRNLVKGLLNQPLVKQAILDEAERENISAEKAKAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEGVQKVAQGHEVIYVPCHRSHIDYLLLSYLLFRNGLTPPHIAAGINLNMPVIGSLLRRGGAFFMRRTFKGNPLYTSVFNEYLHTLFTKGFPVEYFVEGGRSRTGRMLQPKTGMLAITMRSFLRSSRMPIVFVPVYIGYERVLEGRTYLGELRGASKKKESIFDIFKVIGALKQRFGQVAVNFGEPIKLAEFLDAEQPDWRQQELGPQYKPAWLNETTNRLGEKVAQHLNEAAAINPVNLVALALLSTTRLALDDRAMARVLDLYLALLRKVPYSPHTTLPEGDGRALIEHVKDMDLLAEQNDALGKILYLDEQNAVLMTYYRNNVLHIFALPALLASFFQSASRMSREQILRYTRALYPYLQSELFIRWTLEELDGVVDQWLEAFVEQGLLRFEKDVYQRPAPSSRHFVLLTLLSKSIAQTLQRFYMTVSLLLNSGQNTVSAEELEDLCTVMAQRLSILHGLNAPEFFDKSLFRHFIQTMLDLDVLRRDEAGKLSYHELLGELAEGAAKRVLPAEIRLSIRQVALHRSEDAADQVVAQPET
>CP022411.1|AZZ74623.1|1272912_1273122_+|cold-shock-protein
MATRETGNVKWFNDAKGYGFIQREDGVDVFVHYRAIRGEGHRSLTEGQQVEYAVITGEKGLQAEDVVGL
>CP022411.1|AZZ74624.1|1273233_1273611_-|hypothetical-protein
MRQPDIEIYLKDADVDHKAISAWLGAALGPCTDWVQKGQTWKCKAGNVPVTWLPKAVGKWNSLYLESDQTPWDDDIACARAAFAALNVEVRCAPGTWVEEEGEETADRWMRISEDGEEEITWKTA
>CP022411.1|AZZ74625.1|1273686_1274496_-|SAM-dependent-methyltransferase
MLACPICSEPLNAVDNGVVCPAGHRFDRARQGYLNLLPVQHKNSRDPGDNQAMVEARRDFLNAGHYAPVAKRLAELAASYAPDRWVDIGCGEGYYTAQIAEALPHADGYALDISREAVKRACKRNPAITWLIASMARVPLASGSCQFLASVFSPLDWEEAKRLLSVGGGLMKVGPTSGHLMELRERLYDEVREYTDDKHLALVPEGMALAHSETLEFKLTLDKPEDRANLLAMTPHGWRASAERRAAVIEQAEPFETTVSMRYDYFVLQ
>CP022411.1|AZZ74626.1|1274495_1275647_-|succinyl-diaminopimelate-desuccinylase
MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFSLEPMRIEDVDNFWATHGTNDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAERFVADYPNHKGKVAFLITSDEEGPAHHGTKAVVERLAARNERLDWCIVGEPSSTTLVGDVVKNGRRGSLGAKLTVKGIQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHDLDWHIDWALSGLPFLTEPGALLDAVSASIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNERVLAADLDVLTEIYYQTLIKLLA
>CP022411.1|AZZ74627.1|1275886_1278478_-|beta-(1-3)-glucosyl-transferase
MSSRKFGLNLVVVLAIAALFTGFWALINRPVSAPNWPEQISGFSYSPFQQGQFPQKDQYPSDDEMRRDLEIMSKLTDNIRIYSVDGSLQDIPKLAEEFGLRVTLGIWISPDQERNEREITRAIELANTSRSVVRVVVGNEAIFRKEITAQELSVLLDRVRAAVKVPVTTSEQWHVWEEHPELAKHVDLIAAHVLPYWEFIPVDKAGQFVFDRARDLKKLFPKKPLLLSEVGWPSNGRMRGGADASPADQAIYLRTLVNKLNRQGFNYFVIEAFDQPWKASDEGSVGAYWGVFNAARQQKFNFEGPVVAIPQWRVLAIGSVVLALLSLTLLMIDGSALRQRGRIFLTFIAFLCGSVLVWIGYDYSLQYSTWFSLTVGFLLALGALGVFIVLLTEAHELAEAVWIHKRRREFLPVEGDSSYRPKVSIHVPCYNEPPEMVKQTLDALAALDYPDYEVLIIDNNTKDPAVWEPVRDYCATLGPRFKFFHVSPLAGFKGGALNYLIPHTAKDAEVIAVIDSDYCVHPNWLKHMVPHFADPKIAVVQSPQDYRDQNESTFKKLCYAEYKGFFHIGMVTRNDRDAIIQHGTMTMTRRSVLEELGWADWCICEDAELGLRVFEKGLSAAYYHDSYGKGLMPDTFIDFKKQRFRWAYGAIQIIKRHTSSLLRGKDTELTRGQRYHFLAGWLPWVADGMNIFFTVGALLWSAAMIIVPQRVDPPLLIFAIPPLALFVFKVGKIIFLYRRAVGVNLKDAFCAALAGLALSHTIAKAVLYGFFTSSIPFFRTPKNADNHGFWVAISEAREELFIMLLLWGAALGIYLVNGMPSNDMRFWVVMLLVQSLPYLAALIMAFLSSLPKPAAKPEPAPVV
>CP022411.1|AZZ74628.1|1278691_1279510_+|tRNA-cyclic-N6-threonylcarbamoyladenosine(37)-synthase-TcdA
MVMSTEDPRFAGIARLYGIEGLERLRAAHVAIVGVGGVGSWAAEAMARCGVGEISLFDLDDVCVSNANRQLHALDSTVGKPKVEVMAERLRGINPDCTVHAVADFVTRETMAEYITPNIDCVIDCIDAVNAKAALIAWCKRRKIQIITTGGAGGQIDPTLIQVCDLNRTFNDPLASKVRSTLRRDYGFSRTVTRHYSVPCVFSTEQLRYPKPDGSICLQKSFVGDGVKLDCAGGFGAVMMVTATFGMVAATKAVDKIVAGVRRPADRVKSDA

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Crispr_ID: CP022411_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022411_3

1691537-1691683

Orphan

Consensus_repeat	Method
TGGGAGAGGGCTAGGGTGAGGGCCGTCCAATTCCGGATTCAGCAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022411_3

>merge|CP022411|3|1691537-1691683|CRISPRCasFinder
TGGGAGAGGGCTAGGGTGAGGGCCGTCCAATTCCGGATTCAGCAAAATACTTCCAAGTCGCTGAATATCTAAAGCATCCCCCAATCAGTCCCCTCTCCCTTTGGGAGAGGGCTAGGGTGAGGGCCGTCCAATTCTGGATTCAGCAAA

>CP022411|3|3|1691537-1691683|CRISPRCasFinder
TGGGAGAGGGCTAGGGTGAGGGCCGTCCAATTCCGGATTCAGCAAA	ATACTTCCAAGTCGCTGAATATCTAAAGCATCCCCCAATCAGTCCCCTCTCCCTT
TGGGAGAGGGCTAGGGTGAGGGCCGTCCAATTCTGGATTCAGCAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP022411.1\|AZZ79258.1\|1678611_1680294_+\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75006.1\|1700371_1700683_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377609
CP022411.1\|AZZ74993.1\|1667118_1675731_+\|type-I-secretion-target	unknown	unknown	gnl\|CDD\|238119
CP022411.1\|AZZ75007.1\|1700880_1701909_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
CP022411.1\|AZZ75004.1\|1698866_1699682_+\|UDP-2,3-diacylglucosamine-hydrolase	unknown	unknown	gnl\|CDD\|225460
CP022411.1\|AZZ75001.1\|1696609_1696897_+\|selenoprotein	unknown	unknown	gnl\|CDD\|226057
CP022411.1\|AZZ74991.1\|1662910_1665070_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550
CP022411.1\|AZZ74990.1\|1661538_1662900_-\|hemolysin-secretion-protein-D	unknown	unknown	gnl\|CDD\|130902
CP022411.1\|AZZ74996.1\|1688256_1688844_-\|YecA-family-protein	unknown	unknown	gnl\|CDD\|225855
CP022411.1\|AZZ75000.1\|1694348_1696538_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224666
CP022411.1\|AZZ74992.1\|1665227_1666586_-\|channel-protein-TolC	unknown	unknown	gnl\|CDD\|273829
CP022411.1\|AZZ74989.1\|1660827_1661424_+\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|225690
CP022411.1\|AZZ75003.1\|1697967_1698732_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP022411.1\|AZZ74997.1\|1689240_1691370_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
CP022411.1\|AZZ75002.1\|1696890_1697784_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
CP022411.1\|AZZ74999.1\|1692435_1694205_+\|peptidoglycan-binding-protein-LysM	unknown	unknown	gnl\|CDD\|225711
CP022411.1\|AZZ74994.1\|1680517_1682803_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|273608
CP022411.1\|AZZ75005.1\|1699766_1700357_-\|phosphohydrolase	unknown	unknown	gnl\|CDD\|226791
CP022411.1\|AZZ74998.1\|1691873_1692308_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|179596
CP022411.1\|AZZ74995.1\|1687850_1688246_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377291

Protein	Function_ID	Function_description	E-value
CP022411.1\|AZZ75005.1\|1699766_1700357_-\|phosphohydrolase	gnl\|CDD\|226791	COG4341, COG4341, Predicted HD phosphohydrolase [General function prediction only].	3.88483e-25
CP022411.1\|AZZ75006.1\|1700371_1700683_-\|hypothetical-protein	gnl\|CDD\|377609	pfam06127, DUF962, Protein of unknown function (DUF962). This family consists of several eukaryotic and prokaryotic proteins of unknown function. The yeast protein YGL010W has been found to be non-essential for cell growth.	1.61015e-45
CP022411.1\|AZZ74993.1\|1667118_1675731_+\|type-I-secretion-target	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.05097e-17
CP022411.1\|AZZ75007.1\|1700880_1701909_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	1.37382e-42
CP022411.1\|AZZ75004.1\|1698866_1699682_+\|UDP-2,3-diacylglucosamine-hydrolase	gnl\|CDD\|225460	COG2908, COG2908, Uncharacterized protein conserved in bacteria [Function unknown].	4.34547e-85
CP022411.1\|AZZ75001.1\|1696609_1696897_+\|selenoprotein	gnl\|CDD\|226057	COG3526, COG3526, Uncharacterized protein conserved in bacteria [Posttranslational modification, protein turnover, chaperones].	1.65969e-61
CP022411.1\|AZZ74991.1\|1662910_1665070_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
CP022411.1\|AZZ74990.1\|1661538_1662900_-\|hemolysin-secretion-protein-D	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	4.70953e-127
CP022411.1\|AZZ74996.1\|1688256_1688844_-\|YecA-family-protein	gnl\|CDD\|225855	COG3318, COG3318, Predicted metal-binding protein related to the C-terminal domain of SecA [General function prediction only].	2.65028e-42
CP022411.1\|AZZ75000.1\|1694348_1696538_-\|hypothetical-protein	gnl\|CDD\|224666	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	1.26614e-70
CP022411.1\|AZZ74992.1\|1665227_1666586_-\|channel-protein-TolC	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	1.50955e-74
CP022411.1\|AZZ74989.1\|1660827_1661424_+\|DTW-domain-containing-protein	gnl\|CDD\|225690	COG3148, COG3148, Uncharacterized conserved protein [Function unknown].	1.16511e-70
CP022411.1\|AZZ75003.1\|1697967_1698732_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.80935e-26
CP022411.1\|AZZ74997.1\|1689240_1691370_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
CP022411.1\|AZZ75002.1\|1696890_1697784_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.12003e-12
CP022411.1\|AZZ74999.1\|1692435_1694205_+\|peptidoglycan-binding-protein-LysM	gnl\|CDD\|225711	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion].	8.51899e-29
CP022411.1\|AZZ74994.1\|1680517_1682803_+\|autotransporter-outer-membrane-beta-barrel-domain-containing-protein	gnl\|CDD\|273608	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain. A number of Gram-negative bacterial proteins, mostly found in pathogens and associated with virulence, contain a conserved C-terminal domain that integrates into the outer membrane and enables the N-terminal region to be delivered across the membrane. This C-terminal autotransporter domain is about 400 amino acids in length and includes the aromatic amino acid-rich OMP signal, typically ending with a Phe or Trp residue, at the extreme C-terminus. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	8.24978e-71
CP022411.1\|AZZ74998.1\|1691873_1692308_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|179596	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional.	3.8577e-29
CP022411.1\|AZZ74995.1\|1687850_1688246_-\|hypothetical-protein	gnl\|CDD\|377291	pfam04304, DUF454, Protein of unknown function (DUF454). Predicted membrane protein.	8.21497e-51

>CP022411.1|AZZ74997.1|1689240_1691370_+|DNA-helicase-RecQ
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRDGLAVVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLSFLQGLNIALFAIDEAHCVSQWGHDFRPEYLQLGQLAEMFPDVPRIALTATADKRTREEIVTRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVEEVAAFLSEQGFPALPYHAGLPNDLRAFNQKRFLNEEGLIMVATVAFGMGIDKPNVRFVAHLDLPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQALSAIFRTGQRYGVGHLVDVLLGKDNEKVRSFGHQHLSVYGVGKALSESEWRSLFRQLVARGLADVDHEGYGGLRLNDSCRPLLKGEVSLELRRDLKPQVTAKTASKSPASQLVRGEEREQWEALRALRRKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGDAFLEVLGGEVEAPKAVADVRHELITLARAGMTPLQIAGQLQCSEKNVYTMLAEAIGKQQLSLEQALDLPEELMGEVQDAFLDGEGELPSVAEVAELFAGRVPEGVLYCVRAALQSEFEM
>CP022411.1|AZZ74996.1|1688256_1688844_-|YecA-family-protein
MSFAEQLTRLQVFLDADELHDEALDYVAAHGYLTALSICAEDVPEREWIDALFAEEPHYSSDAQREEIEATLIGLKAHIARQLASDEEFELPCELDLGDDPDDSELRGWCIGFMEGVFLREAAWFETAEEEVSEMLLPIMVGSGLFDEQPEFEDIAKDANLMDDMIVQIPEALTALYLLCQAPDEKPAILKPRHH
>CP022411.1|AZZ74995.1|1687850_1688246_-|hypothetical-protein
MDNPIGNRPLMLRYFLLAVGWLSVALGVIGIFLPVLPTTPFLLLAAACFARSSPRFYQWLVEHPRLGPWIRDYLDGNGIPLKGKVYAIGLMWASILFSCYLVPLPWARGFMLTSAVLVTIYIVRQKTLRKP
>CP022411.1|AZZ74994.1|1680517_1682803_+|autotransporter-outer-membrane-beta-barrel-domain-containing-protein
MKPEVFSFCRITSTGSFRMLVAIPAFFLLGSPAFAVIVDNSTLDVDSTVPPTDYLVRNNGVLNLAQAMTHTLNVISGSTLNINGATVNAESGIEGISITASRGNLVQADVTSDSIGMMVNRSFSSTQGSTVTATDSQFRGGEAGIQITALSNLILIGSEVTGQAAGSVGLSMIGGEVHATAGTRISGDRAGVRMVNDSSVSGSNTLVLDGASIEGRNGPAIEVAGGADVSIEVLNNSTLQGSANQLLAVQEASTAAVKVGNSTLIGNFSVTGSSTADFIFDRGDMTGDMLVEDGSTANVTLQNQSQFTGRLDKVASVNINDTSNWTLTGDDSVGAMRLEGGRVTFGAAQAPTTYYQLTVGALAGTGTFEMKGDFANGQSDFLNVLGQSEGQFDLAVKASGLDAASPQQLTLVRTGTTDGANFALAGDQRVDVGTWSYGLASREIEGGAKEWFLDPTTEVISPGARSVLALFNTAPTVWYGELSSLRSRMGELRFNGGQAGGWIRTYGNKYNVADGSGVGYQQTQQGLSLGADARLGESQVLVGVLAGTSESDLDLDRGTSGTVKSYYVGPYVTWLDSDTGYYFDGVLKFNRFRNESKVNLSDGSRTKGDYDNWGVGGSAEFGRHIKLANDYFVEPFAQLSAVQIQGKHYTLDNDMDADGDRMRSLLGKAGATFGRNIALANGAVAQPYVRAAVAYEFATNNEVKVNNNVFNNDLSGSRAEFGAGVAVAMSERWQVHVDLDYANGEHIEQPYGVNLGLRYSF
>CP022411.1|AZZ79258.1|1678611_1680294_+|hypothetical-protein
MWNGTRLPQTRYSYTTPLDAGILLIPMTLPANLTDREGKHELSYYLSQGGNIGVVTPVEINVDRSPPLPITEVNVPTEVERDGITKKYLDDNGHVLITVQEYAGHMLNDVVDCFIGTSVPLPTLIGTITRTDLATPLEFQLTAAMLDDEEGVRAIYWQVTDRKGNKSLHSPYKRLNVTLTDPPAGLLPLDIPLYSDNLIDLEDAQQPIGVGIKDEYTNFIDGDQLEVTWDGQLQSAVTIPGFPFYVDVPFRNVFNGNAGLKTVTASYQIRRKGVAHPLVPVELDNISVDLRKPGAPIDPDKPGNPNPDLPTVSVQGNDGGLPNQLREADNTGPVIVTATLYTEAKENDEVQLYWKGEPVSEADGGIVKIGATLPADLEWTVLWKVFEDAGNGNPIKTHYVISHDVNDNVDVSLATDVDVLVRDGVVPEVKFQHLDDDFGLLNCLSLRRDSVAGVVVEVLVAGGEPQLADKVLTFTYQGYSDNGSTTKPGTEAKVTYTPSSQEATAGFIVKVPYDPAILTTENAWGGISYSAVIDGRDTPSAEHVVRVYMVDPAGGSCPLP
>CP022411.1|AZZ74993.1|1667118_1675731_+|type-I-secretion-target
MATLIGTVTKVIGQVFAQSADGTKRALVEGDRLFAGDQLITGAEGAVAVHLQNGQELTLGRGSSMTMTGELLAGQAAHVNAAEAVTPSDAQLTDVEQIQKAIAAGDDPSQTAEATAAGPNAPGGAPGEAGGGHSFVLLTEVGGRVDPIIGFPTAGFGGIPEFPEERHNAVIDNGDDTPAVVVPPPVNNPVTLIGLNVAGGELNLSEANLPDGSSANPGALTQSGSFTVLAPDGLTSLSIGGINVIVGGVPIGFPQSITSQLGNTLTITGYNPATGVVSYSYTLNGNETHAAGDGVNNLSEQFTVIAGDSNGDTATGTLDVNITDDVPKAFDDSNGTASETQLTLTGNVLTNDVQGADRVPTGPVTPGTFTGTYGTLVLNADGTYTYTLNTSDADFKNLHGGGNGTETFAYTITDSDGDTSSANLVLQIHNNDDPVVINGLNVEGGELTVYEKNLSDGSAPDATALTQSGTFTITALDGVTTLTVGGIAVVTNGVAAGFPQSITTPLGSTLTITGFNATTGVVSYSYTLVDNEAHPTANGANNLPEQFAVTVVDDNGTTANGTLDVNITDDVPKAFDDSNGTASETQLTLTGNVLTNDVQGADRVVTNESAGPITAGTFTGTYGTLVLNANGTYTYTLNTNDADFKNLHGGGNGTETFAYTITDSDGDTSTGNLVLQIHNNDDPVIINGLDVNGGELTVNEKNLSDGSAPDSTALTQSGTFTITALDGVTTLTVGGIAVVTNGVAAGFPQSVTTPLGSTLTITGFNATTGVVSYSYTLVDNETHPTANGANNLPEQFAVTVVDDNGTTANATLDVNIVDDLPKAVDDSNAGTASETLLTLTGNVLTNDVQGADRVPSGPVTPGTFTGTYGTLVLSANGTYTYTLNTSDADFKNLHGGGNGSETFTYTITDSDGDTSTANLVLQIHNNDDPVIIDGLDVNGGELTVYEKNLTDGSTPDATALTQSGTFTITALDGVTTLTVGGIAVVTNGVAAGFPQSIVTPLGSTLTITGFNAATGVVSYSYTLIDNEAHPTANGANNLPEQFAVTVVDDNGTTANGSLDVNIVDDLPKANDDSNGTASESQLTLTGNVLTNDVQGADRVPTGPVTPGTFTGTYGTLVLNANGTYTYTLNTNDADFKNLHGGGNGTETFAYTITDSDGDTSTANLVLNIHNNDDQVYLNGLDVNGGELTVYEKNLSDGTSPDTPALTQSGTFTVTALDGLQTLTVGGINVVTGGVAAGFPQSIVTPLGSTLTITGYNPATGVVSYSYTLVDNETHPNANGANSITENFNVVATDTDGSTANGQINVNIVDDLPSAHPDAASVAEGGTVSGNVLNNDIGGADGPAVTGAVVGVRAGADTSTSAIGGLNSNINGTYGYLTLDANGNAVYHSNPNVVNGPGAVDVFTYTVRDSDGDESTTTITIDVSNSKLCATSDTDVTVYEKALDLTKDGADLAPGTVTGSDPTSTGETASGTLVGSVTGAVGAISYALVGSATGNYGQIVLNPNGTYTYTLTSPASTTPHADDGANSLSETFTYQATDSLGNIVTSTIVVNIVDDVPKAVNDSNANSASETQLTLTGNVLSNDVQGADVVATGPNAGPITPGTFTGTYGTLVLNANGTYTYTLNPNDADFKNLHGGGNGSETFSYTLTDADGDTSTASLVLNIHNNDDPVVLNGLDVNGGELTVYEKNLSDGTSPNTPALTQNGTFTVTALDGLQTLTVGGIAVVSNGVAAGFPQSVVSPLGSTFTVTGYNPATGVVSYSYTLVDNETHPNANGANSLTENFNVVATDTDGSTANGQINVNIIDDLPTAKPDTSSVAEGGTVNVSVLGNDISGADGAATVSGVRAGSNTGTSAIGGLNSNINGNFGYLTLDAAGNAVYHSNPNSVSPPGATDTFTYTIRDSDGDESTTTITINVADSKLVASVDQDVTVYEKALDLSKDGADLAPGTVTGSDPSNTGETATGTLVGAVTGGSGAITYTLVGSATGTYGQIQLNADGTYTYTLTSAPKTSPGANDGANTLSESFTYQATDALGNSTTSTLVVNIVDDVPKAVASDRSVAAVEIDSNILIVLDISGSMADASGVPGLSRLALAKQAISALLDKYDDLGDVKVQLVTFSSNATDRTSVWVDVATAKTILAGLTAGGGTNYDAAVAVMQTAFNTSGKLTGAQNVGYFFSDGKPNEGDINAADEAALKNFLDANNIKNYAIGLGSGVSNANLDPLAYDGISHTNTNAVVVTDLNQLNSVLSGTVQGAPVTGSLLGEGGTFGADGGFIKSIVVDGTTYTYDPKALSGQGSLTPSGGTNHGTFNTANNTLSIATNNGGTLLINLDSGDYTYTSQKTTAVVITENIGFTVSDNDGDLASSTLTVKVIPNAPTVAVDDHVITNVLSGNIVVPGELLLANDTDPNGDTLNATPTSFNTGWISKAADFTGTGAINFTGTNVNTAANQNLANVRNSFSANAATMTAVLVVSGYLGAVTNSNANDEDRITVNLRQGETLNLDHNLAAGHVSMEYSINGGAYTTLADGQTLTASADGVYQIHITNIANPSGGGNPNAAENYQLTMTLNYAGAHDITPDFHGSYTANDNHGGSDTANVSISYQDGHTLTGTSGDDVLVAGSGDNIINAGDGNDVLTAGSGNNELHGGAGNDLLYSGPGNDLLDGGTGSDTASYAHATAAVTVNLGLLGAQNTLGAGTDTLTGIENLVGSNFNDTLTGDNNNNVINGGLGNDILNGGGGDDLLIGGMGNNTLTGGAGADTFQWLKGNSGHDLITDFTPGTDKLDLSQLLQGENGTTASLDDYLHFTVSGSGASVLTSIDVSAMAGATPNQTIDLAGVNLASHYGVTPGAGGVVAGGHDTATIISGMLNDHSLKVDTV
>CP022411.1|AZZ74992.1|1665227_1666586_-|channel-protein-TolC
MRVLTPLCSAVLLAMACTSQAQAMNLTEAIQSTIATHPELASRVDARLSADEQVKVAKGGFYPSVDLNAAYGRGYSDNTNTRAFGNHHTEILNYTQSELRLRQMLFDGFNTANEVERTKGVSNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLAKNNLQAHLRVNDQIGLRTERGVGSTADSDQSVARKALAQNNLDTAEVDLADAESNFYSVVGRMPDELETPASTRGELPTSLPEAQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWRVGVVMNYNLFRGGSDKARLASDAHQINQAMDIRNNALRQLNENIHLAWNAMVNAKKQTPTAREYAETTKRVRAAYQDQFGLGQRTLLDLLDSENELYNANRRYTEIRYTEEYSMYRVLANMGQLLSKQRVVLPADAIAATEVKNEARLPELK
>CP022411.1|AZZ74991.1|1662910_1665070_-|type-I-secretion-system-permease/ATPase
MTSMEPGHTGIDPRLSFDDPLLDGLLILCKLHGATVSRASLSAGLPLNKQRLSLDLLPRAAARAGLQARILRRELKDISPLNLPILLLLNDGRTAVLRRFGDDGKALILPSEADGGEQWISRDELTEHYSGQALFARPRHELEDLRSPLVPRVHAWFRDTLKLSKWLYSDAILASFLINLLGLMVPLFVMQTYDRVVPNQATSTLWVLSIGLLIGTGFELVLRVVRAHLLDTAGKKTDVILSATLFERITGMSMKARPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFVVLMLVVIGLLGGWLVVIPLLAFPITIIFAMIIQVRLRDTVQKSLSLGAERQAVLIETLGGLETLKACSAESERQHKWETTHGALTRLDSHARNLSALATNGTLFIQQFSGMATIVAGVYSIIAGNLSVGALVASYMLGSRVLAPLGQIAGLITRYQQAQLTMKSTDALMALPQERDGKQRPLERTQLQGALDVSGVTFHYNGQNAPALSNVSFSLKPGERVGIIGRSGSGKSTLARLVMGFYEPEEGQLLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDSRMLEVAELTGVTELARQHPQGFDRPVGERGQLLSGGQRQAVLLARSLLLDPPIMLLDEPTSAMDNSSEDLLRQKLHGWVQGKTLLLVTHRTSMLSLVDRLLVLDNGRVVADGPKEAVIDALRKGRVGSAAV
>CP022411.1|AZZ74990.1|1661538_1662900_-|hemolysin-secretion-protein-D
MSASSDSKDRGYFDSFGKSAEAEFMPETAGASLQDSPRWSRITVWLAAALLISAVVWARFAVLEEVTMGEGKAIPSSKIQVIQNLEGGIVTEIFVREGQMVNKGDTLLRLDDTRFRSNKGESEADRYALTAQVERLSAEAEGRPFKLSDEVIAKAPQVAEDERSLYEQRQRRLASEQRTLSEQLRQKTQELAEFRSKQGQFSSSLALLQQEMNMSEPLVKTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAIAEIRSKIDESEQTFRSEAAKELNEKRTDLSKITATSIAIDDRVTRTTVTSPVHGVIKQLKVNTIGGVVQPGSDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELIGADTITDDKGNSFYLIQVRTDKNHLGGDVKPLLIIPGMVATVDIITGEKSVLDYLLKPVLKARTEAMRER
>CP022411.1|AZZ74989.1|1660827_1661424_+|DTW-domain-containing-protein
MSRPQCPRCLRPQTHCLCPLIPSLDSRTRVLLLQHPSEVNHALNTARLAALGLTNAELIVGEVFEDLPALLNRPGYRARLLFPADDAQPMQAYGESDEPLLLVVPDGTWRKARKMLHLNPLLAALPRVTLAEGGVSRYRLRKAPGPGALSTIEAIVQALQTLEAPRSFEPLLKPFEALIEGQIAAMGEETFQRNHGDK
>CP022411.1|AZZ74998.1|1691873_1692308_+|MarR-family-transcriptional-regulator
MPLTDQHRFGMQLAQMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEAPTQRELAQSVGVEGPTLARLLDSLESQGLVQRQSVMEDRRAKKIVLCAPALPLIEQIETIATQLRHELFEGVDEADLKVCMRVHGHILANLEKS
>CP022411.1|AZZ74999.1|1692435_1694205_+|peptidoglycan-binding-protein-LysM
MLASRHVVLRSGAKWLLVAGIFSYSAGSMALGLGDITVHSGLNQPLKADIALIDVGGLTQNDLSVSLATADEFAQAGVERVFFLNDLKFIPILHGNRQMIRVTSSKPVNEPFVNFLVQLNQPNGRLLREYTVLIDPPGSPGIVPATDEPDPRAQSSEFPTVEPAVVAPQAPQAKRDTVPAPTPATPPANDALAEQLAASVLLNQQLQKSVDELNAKLQTQDVQIAAGKKQISDLQTQLVELRKAPPPTEATPAPVPVVAPVESTDDGLNWPLLGGLVLLLGALAGLFVHRRRQQQIPTDEPLPLLPQGREPDVADVESAEPVSTHASAQHREEPAAGDVLEAVGIYLAYGRLGEAAGLLRDALHKEPERTDIGLQLLEVLGRQGDSAAYEQQESHLREQGVDTQTLQDVRARHPKLAVTAALAAVPPIVAAVPVVAAQPAPEADFELNLGELSMDSSWDLEDSRTATTEPAADTSALGSGLQVLPQDFELPQASSEDPELEWIPEPDAGPLDEDFLNEFADAEPSLALQPLDLQEPEPLHDENSGKLEQAQTCIDDGDIDSAIALLNELLKEGDEPLKQTARTLLAGIR
>CP022411.1|AZZ75000.1|1694348_1696538_-|hypothetical-protein
MRRLLFCLLLGFLPLLVHAGEASRPKVGLVLSGGAARGLAHIGVLKALEEQGIKIDAIAGTSMGAVVGGLYASGYKIDELEKLALNIDWQAALSDAPPREDVPFRRKQDDRDFLVKQKLSFRDDGSLGLPLGVIQGQNLALLLESLLAHTSDTRDFDKLPIPFRAVATDIANGEKVVFRKGHLPQVIRASMSIPAVFAPVELDGRLLVDGGMTDNIPLDVAREMGVDVAIVVDIGTPLRNRKQLTTVVDVLNQSITLMTRSNSEEQLAALKPSDVLIQPTLAAFGVTDFGKAQEMIDAGYRATRILDARLAVLKPVDSQDAELNAARSPGQRTPIITAIRVENDSKVDDDVIRYYIRQHIGEPLDLGRLHSDMGTLYGLDYFEQVQYRVVHKGQDHTLVISARGKRSGTDYLRVGLNLSDDMRGDSAFNLGASYRINGINRLGAEWLTRAQIGDKQELYTEFYQPLDVGSRYFVAPYASFEAQNVEAVLDNDPIAQYRVERYGFGLNFGRQIGNNGEVRFGVGEAWGKADVRIGDQDLPSENFNEGFYALKYSYDSLDNVYFPHEGKDVSLTLTQFEPGLGSDTRYRQWDFKIDKAMSHGPDTLILGGRYGRTLDDANVVTSSFLLGGARQLSGFREDAISGQNISLMRAVYYRRLTPRSYLPLDFPLYAGASLERGRAWNNDNEFDSGYINAASVFIGFDTPLGPLNFSYGLNDANEQAVYLNLGQTF
>CP022411.1|AZZ75001.1|1696609_1696897_+|selenoprotein
MTVAKAEVVITYCTQCQWLLRAAWLAQELLSTFADDLGKVSLVPGTGGVFQITCAGVQIWERKADGGFPEAKVLKQRVRDQIDPDRDLGHNDRTQ
>CP022411.1|AZZ75002.1|1696890_1697784_-|EamA-family-transporter
MTPRTALGALHIGALMFGLTGVFGKLAAASPAVIVFGRAAFAVLALAFFARFASQSGWQKLQAVDWRRLALSGVLLAGHWVSFFLSVKIAGVAIATLGFASFPAFTVILEGLIFRERIRANEIVLVVLVSIGLILVTPAFDLGSGATIGLLWSVLSGLLFSLLSLTNRASSGRIPAVQAALCQNVVVALCLLPVAAPQLSEVRALDWLWIGLLGVFCTGVAHSLFVASLAVIKARTAAVVFAMEPVYGITIAWLLFNENPTLRMLMGGALIIIAIVVSARMSGSADKKTVAAEAASH
>CP022411.1|AZZ75003.1|1697967_1698732_-|AraC-family-transcriptional-regulator
MRPILTLRQYTHDLIVHSHEHAQLVFGLSGALDFEVEGCGSQVRQQSFVVIPSGAHHACGSPDGSRCLVLDIPEGPWVTDSLGEHAEASHRLLDQPARLSLDSRQSQLVSWLANSPVSDPLIAQQGAVLLLASLNHAQPAELATRRLPYAALDAHIEQNAAYPLQVADLARVAGLSSARLHARFMAECGQTPMDYIRSRRLHLAVQMLRDTALPIGEIASRVGYSSQSAFSAAVLREFGASPGQLRRDSCDKRR
>CP022411.1|AZZ75004.1|1698866_1699682_+|UDP-2,3-diacylglucosamine-hydrolase
MTSAELARPSRKQRVRTLWISDVHLGTRDCQAEHLSQFLKGYHADRIYLVGDIIDGWKLRGGMYWPQAHTNVIRRLLTMSKRGTEVIYVTGNHDEFLRRYSKLILGNIQLVDEAVHVTADGRHLLVIHGDQFDVITRYHRWLAFLGDSAYEFTLTLNRWLNHWRARYGYGYWSLSAYLKHKVKTAVSFISDFEEAIAHECVKRELHGVVCGHIHHAEIRKVGEVDYLNCGDWVESCTALIEHWDGTIELYRLADAQAREAELKAAKVAELA
>CP022411.1|AZZ75005.1|1699766_1700357_-|phosphohydrolase
MNANARFTHMKDGTQEDWAIIAADFSAYAKQLPSRILTHLKLLEGDFGGFPVDRLTHSLQTATRAFRDGRDEEYVVCALLHDIGDTLGSYNHPDIAAAILKPFVSAENLWMVEKHGVFQGYYFFHHLGMDRHLREQFAAHPQYQATAEFCAKYDAAAFDPDYDTLPLSFFEPMMERLFAQPKNSIYKAAMQEHSPA
>CP022411.1|AZZ75006.1|1700371_1700683_-|hypothetical-protein
MENIKHFNSFTEFYPYYLSEHNNSTCRRLHFIGTTLVIFIVAMTIAKGAWLLLLAVPLAGYSFAWVGHFFFEKNRPATFQHPLYSLLGDFVMYRDMILGRVAF
>CP022411.1|AZZ75007.1|1700880_1701909_+|AraC-family-transcriptional-regulator
MGIVKALEMDGLDCRVLFKQLGLDYTALDDPDARFPQDSMTRLWQRAVEVSGNPAIGLNMGKVVRPASFHVAGYALMSSNTLAEGFQRLVRYQRIIAESADLSFRLLEEGYALILTVHGDHLPPTRQSAEASLACALGLCGWLTGRTLHPVKVLVQGDQPENLQPYKQAFHAPLVFNAPYDALIFERADMEAPLPTANEAMALLHDRFAGEYLARFSESRVTHKARQVLCRLLPQGEPKRDTVAQTLHLSQRTLQRRLQEEGTSFQQLLDDTRRELAEQYLAQPSMTLLEIAYLLGFADPSNFFRAFRRWFDTTPGDYRTRLLQAPGAISDAKRPEYTVQTP

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Crispr_ID: CP022411_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022411_4

2135438-2135574

Orphan

Consensus_repeat	Method
TTCACTGTCATACACAAAACGTGCAAACGCTCGAGATCAGTTCCCTCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022411_4

>merge|CP022411|4|2135438-2135574|CRISPRCasFinder
TTCACTGTCATACACAAAACGTGCAAACGCTCGAGATCAGTTCCCTCTCCCGGAGGGAGAAGGAGCCGATCGGTATGAGCCTGGATTTTCACTGTCATACACAAAACGTGCAAACACTCGAGATCAGTTCCCTCTCC

>CP022411|4|4|2135438-2135574|CRISPRCasFinder
TTCACTGTCATACACAAAACGTGCAAACGCTCGAGATCAGTTCCCTCTCC	CGGAGGGAGAAGGAGCCGATCGGTATGAGCCTGGATT
TTCACTGTCATACACAAAACGTGCAAACACTCGAGATCAGTTCCCTCTCC

Protein	Signature genes	Signature genes Name	Protein_function
CP022411.1\|AZZ75393.1\|2128424_2128973_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
CP022411.1\|AZZ75395.1\|2129940_2130423_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
CP022411.1\|AZZ75398.1\|2132649_2132862_-\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	unknown	unknown	gnl\|CDD\|225738
CP022411.1\|AZZ75400.1\|2135613_2136153_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225739
CP022411.1\|AZZ75405.1\|2140333_2140942_-\|cytochrome-c-oxidase,-cbb3-type-subunit-II	unknown	unknown	gnl\|CDD\|237725
CP022411.1\|AZZ75409.1\|2144037_2144646_-\|cytochrome-c-oxidase,-cbb3-type-subunit-II	unknown	unknown	gnl\|CDD\|237725
CP022411.1\|AZZ75391.1\|2126368_2126971_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
CP022411.1\|AZZ75402.1\|2138104_2139109_+\|phosphoesterase	unknown	unknown	gnl\|CDD\|227842
CP022411.1\|AZZ75407.1\|2142866_2143820_-\|cytochrome-c-oxidase,-cbb3-type-subunit-III	unknown	unknown	gnl\|CDD\|129864
CP022411.1\|AZZ75397.1\|2131973_2132657_-\|cytochrome-biogenesis-protein	unknown	unknown	gnl\|CDD\|225392
CP022411.1\|AZZ75403.1\|2139162_2140146_-\|cytochrome-c-oxidase,-cbb3-type-subunit-III	unknown	unknown	gnl\|CDD\|129864
CP022411.1\|AZZ75404.1\|2140142_2140328_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	unknown	unknown	gnl\|CDD\|238647
CP022411.1\|AZZ75408.1\|2143816_2144032_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	unknown	unknown	gnl\|CDD\|368492
CP022411.1\|AZZ75394.1\|2129051_2129786_-\|transcriptional-regulator-FNR	unknown	unknown	gnl\|CDD\|183004
CP022411.1\|AZZ75399.1\|2132884_2135335_-\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	unknown	unknown	gnl\|CDD\|225127
CP022411.1\|AZZ75392.1\|2127164_2128313_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
CP022411.1\|AZZ75396.1\|2130419_2131802_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
CP022411.1\|AZZ75401.1\|2136164_2137580_-\|cytochrome-c-oxidase-accessory-protein-CcoG	unknown	unknown	gnl\|CDD\|274278
CP022411.1\|AZZ75406.1\|2140941_2142384_-\|cytochrome-c-oxidase,-cbb3-type-subunit-I	unknown	unknown	gnl\|CDD\|237726
CP022411.1\|AZZ75390.1\|2125267_2126302_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190

Protein	Function_ID	Function_description	E-value
CP022411.1\|AZZ75393.1\|2128424_2128973_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	2.32626e-85
CP022411.1\|AZZ75395.1\|2129940_2130423_+\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0.00728469
CP022411.1\|AZZ75398.1\|2132649_2132862_-\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	gnl\|CDD\|225738	COG3197, FixS, Uncharacterized protein, possibly involved in nitrogen fixation [Inorganic ion transport and metabolism].	2.93293e-20
CP022411.1\|AZZ75400.1\|2135613_2136153_-\|hypothetical-protein	gnl\|CDD\|225739	COG3198, COG3198, Uncharacterized protein conserved in bacteria [Function unknown].	5.60219e-60
CP022411.1\|AZZ75405.1\|2140333_2140942_-\|cytochrome-c-oxidase,-cbb3-type-subunit-II	gnl\|CDD\|237725	PRK14487, PRK14487, cbb3-type cytochrome c oxidase subunit II; Provisional.	2.45013e-149
CP022411.1\|AZZ75409.1\|2144037_2144646_-\|cytochrome-c-oxidase,-cbb3-type-subunit-II	gnl\|CDD\|237725	PRK14487, PRK14487, cbb3-type cytochrome c oxidase subunit II; Provisional.	1.24063e-148
CP022411.1\|AZZ75391.1\|2126368_2126971_+\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	5.20391e-114
CP022411.1\|AZZ75402.1\|2138104_2139109_+\|phosphoesterase	gnl\|CDD\|227842	COG5555, COG5555, Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion].	2.18e-06
CP022411.1\|AZZ75407.1\|2142866_2143820_-\|cytochrome-c-oxidase,-cbb3-type-subunit-III	gnl\|CDD\|129864	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport].	1.73637e-84
CP022411.1\|AZZ75397.1\|2131973_2132657_-\|cytochrome-biogenesis-protein	gnl\|CDD\|225392	COG2836, COG2836, Uncharacterized conserved protein [Function unknown].	6.31533e-57
CP022411.1\|AZZ75403.1\|2139162_2140146_-\|cytochrome-c-oxidase,-cbb3-type-subunit-III	gnl\|CDD\|129864	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport].	2.23629e-80
CP022411.1\|AZZ75404.1\|2140142_2140328_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	gnl\|CDD\|238647	cd01324, cbb3_Oxidase_CcoQ, Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322, or cd01323 for more information on cbb3 oxidase.	4.34584e-09
CP022411.1\|AZZ75408.1\|2143816_2144032_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	gnl\|CDD\|368492	pfam05545, FixQ, Cbb3-type cytochrome oxidase component FixQ. This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon.	2.92316e-07
CP022411.1\|AZZ75394.1\|2129051_2129786_-\|transcriptional-regulator-FNR	gnl\|CDD\|183004	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr.	1.40511e-110
CP022411.1\|AZZ75399.1\|2132884_2135335_-\|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS	gnl\|CDD\|225127	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
CP022411.1\|AZZ75392.1\|2127164_2128313_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	1.17608e-154
CP022411.1\|AZZ75396.1\|2130419_2131802_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
CP022411.1\|AZZ75401.1\|2136164_2137580_-\|cytochrome-c-oxidase-accessory-protein-CcoG	gnl\|CDD\|274278	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG. Member of this ferredoxin-like protein family are found exclusively in species with an operon encoding the cbb3 type of cytochrome c oxidase (cco-cbb3), and near the cco-cbb3 operon in about half the cases. The cco-cbb3 is found in a variety of proteobacteria and almost nowhere else, and is associated with oxygen use under microaerobic conditions. Some (but not all) of these proteobacteria are also nitrogen-fixing, hence the gene symbol fixG. FixG was shown essential for functional cco-cbb3 expression in Bradyrhizobium japonicum.	0
CP022411.1\|AZZ75406.1\|2140941_2142384_-\|cytochrome-c-oxidase,-cbb3-type-subunit-I	gnl\|CDD\|237726	PRK14488, PRK14488, cbb3-type cytochrome c oxidase subunit I; Provisional.	0
CP022411.1\|AZZ75390.1\|2125267_2126302_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0

>CP022411.1|AZZ75399.1|2132884_2135335_-|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS
MTSPLPCYHCALPVPSGSRFTAVVLGQSREFCCPGCQAVAEAIVTGGLESYYQHRSEASANPEALPVQLTDELALYDRADVQQPFVRHEGDLAETTLLMEGISCAACGWLIEKHLRTLPAVAEARLNLSNHRLHVSWADAQLPLSQILAELRHIGYAAHPYQADRASEQLASENRLALRQLGVAGLLWFQAMMATMATWPEFNIDLSPELHTILRWVALFLTTPIVFYSCAPFFKGAMRDLRTRHLTMDVSVSLAIGSAYIAGIWTSITGIGELYFDAVGMFALFLLAGRYLERRARERTAAATAQLVNLLPASCLRLDNNGQSKRILLSELRLGERILVQAGSILPADGKIIDGQSSIDESLLTGEYLPQPRMPGDAVTAGTLNVEGALTVEVQALGQDTRLSAIVRLLDRAQAEKPRLAEIADRAAQWFLLLSLIAAAAIGLLWWELDSSRAFWIVLAMLVATCPCALSLATPTALTAATGTLHKLGLLLTRGHVLEGLNQIDTVIFDKTGTLTEGRLVLRSIRPLAALDSDQCLSLAAALENRSEHPIARAFGRAPLAAEEVHSTPGLGLEGLVGGQRLRIGQTEFVCALSGAPVPTMPDEAGQWLLLADTQGPLAWFVLDDRLRDDAPALLAACKARGWRTLLLSGDSSPMVASVAAELGIDEARGGLRPDDKLQVLQQLHKEGRKVLMLGDGVNDVPVLAAADISVAMGSATDLAKTSADAVLLSNRLDALVQAFTLARRTRRVIIENLLWAALYNGLMLPFAALGWITPVWAAVGMSISSLTVVLNALRLTRLPSPPPASTHSQTRPLPA
>CP022411.1|AZZ75398.1|2132649_2132862_-|cbb3-type-cytochrome-oxidase-assembly-protein-CcoS
MPALYVMIPAALLIVAIAVYIFFWAVDSGQYDDLDGPAHSILFDDQDPKHTAAVDEANASKPDDKAPPHA
>CP022411.1|AZZ75397.1|2131973_2132657_-|cytochrome-biogenesis-protein
MLELAPLLVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQRSRRFRLLLAYNLGRILSYATAGLLIGLAGWAVANSPAALFMRVLAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRYIQPVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQGNALDSALLMLAFGLGTWPVLLATGLAAERVTALLRKRSVRMAGGLLVILFGIWTLPGPHQHWLMGH
>CP022411.1|AZZ75396.1|2130419_2131802_-|oxygen-independent-coproporphyrinogen-III-oxidase
MLDAIRWDSDLIRRYDLAGPRYTSYPTAVQFHGQVGTFDLFHALRDSRKALRPLSLYVHVPFCANICYYCACNKVITKDRGRAAPYLQRLEQEIQLIACHLDPAQKVEQLHFGGGTPTFLSHDELRQLMAHLRKHFNLLEDDSGDYGIEIDPREADWSTMGLLRELGFNRVSIGLQDLDPAVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPENFARTVEEVISLQPDRLSVFNYAHLPERFMPQRRINGNELPAPAQKLEMLERTIEQLTAAGYRYIGMDHFALPDDELAIAQEEQTLQRNFQGYTTHGHCDLIGLGVSAISQIGDLYCQNSSDLNGYQNTLAAAQLATSRGLVCNADDRLRRAVIQQLICNFSLDFAEIEQQFNIDFQGYFGALWPQLQGMASDGLIELDRERIEVLPAGRLLVRSVCMVFDAYLEQQNRQRFSRVI
>CP022411.1|AZZ75395.1|2129940_2130423_+|hypothetical-protein
MTAIGTLGPGSSDVAVMPETFKTSSANVRDPDSPEEATPTLVEGVKVSLSGASIEKSASVGGENSDIDDSGLPENIQQLLKMIRKLQKQIAEKKALIEAVMADKRLSNEEKINKVAALRGAIAALNTGLITANLALSKVVGQSGLTADQNMKVGSLLMKN
>CP022411.1|AZZ75394.1|2129051_2129786_-|transcriptional-regulator-FNR
MSEPVKLRAHNQAHCKDCSLAPLCLPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDTFDSVYAVRSGALKTFSLSDSGEEQLTGFHLPSELVGLSGMDTEKHPVSAQALETTSVCEIPFERLDELALQLPQLRRQLMRVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGFSANQFRLSMSRNEIGNYLGLAVETVSRVFTRFQQNELIAAEGKEIHILDPIQLCALAGGSLEG
>CP022411.1|AZZ75393.1|2128424_2128973_-|adenine-phosphoribosyltransferase
MVFDSFDIKSLIRPVIDFPKPGVIFRDITPLFQSPKALRLVMDSFAHRYVEADFTHIGAMDARGFLIGSVLAYQLNKPLVLFRKQGKLPADVLAEGYATEYGEAFLEVHADSLCEGDSVVMFDDLIATGGTLIAAANLIRRMGARVHEAAAIIDLPELQGSQRLQDMGIPTFCLTQFALTDK
>CP022411.1|AZZ75392.1|2127164_2128313_+|acyl-CoA-dehydrogenase
MPAFQEYFDPSHQLVRDSVRRFVEREILPDIDQWEEAESFPRELYLKAGAAGILGIGYPETLGGSHEGDLFAKVAASEELMRCGSGGLVAGLGSLDIGLPPIVKWARPEVRERVVPPVLGGEKISALAVTEPGGGSDVANLQTRAVRDGDFYRVSGSKTFITSGVRADFYTVAVRTGAPGFGGISLLLIEKGTPGFTVGRQLKKMGWWASDTAELFFDDCRVPVGNLIGAENMGFACIMGNFQSERLALALMANMTSQLALEESLKWAREREAFGKPIGKFQVIKHRLAEMATALEVSREFTYRQAAKMAAGQSVIKEISMAKNFATDTSDRITTEAVQILGGLGYMRESLVERLYRDNRILSIGGGTREVMNEIISKQMGL
>CP022411.1|AZZ75391.1|2126368_2126971_+|recombination-protein-RecR
MSFSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGLRLAQALSQAMEGVGHCRQCRTLTEDDLCPQCADTRRDDTLLCVVEGPMDVYAVEQTGFRGRYFVLKGHLSPLDGLGPEAIGIPQLMTRIEEAGTFTEVILATNPTVEGEATAHYIAQLLNNKGLVASRIAHGVPLGGELELVDGGTLAHSFAGRKPISL
>CP022411.1|AZZ75390.1|2125267_2126302_+|NADP-dependent-oxidoreductase
MSDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLADGEVLLKTLYLSLDPYMRGRMSDAPSYAAPVQIGEVMTGGAVSRVEDSRHPKFHKGDLVVGATGWQSHSISDGRNIIPIPAGLPSPSMALGVLGMPGMTAYMGLMDIGQPQEGETLVVAAASGAVGSVVGQVAKIKGLRAVGVAGGAEKCKYVVEELGFDACIDHKAADFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNPKARIPLCGLIAGYNASEAPQGPDRLPMLQRTLLTKRVRIQGFIVFDDYGDRQPEFISHMVPWVRDGKVKFREDVVEGLEQAPEAFIGLLEGRNFGKLVVKVAQD
>CP022411.1|AZZ75400.1|2135613_2136153_-|hypothetical-protein
MPAANAASPWYKHLWPWIIIGILACSVTLTLSMVTIAVNNPDNLVNDNYYEAGKGINRSLDRELLAQNLKMRAAVHLDGMTGEVDLRLSGDSQPKTLELNLISPTQPEKDRKIVLTRSESETGRYIGQLGDKVEGRRFVELLGSQDDHVWRMFEEELVSHDKDLLLGDEPLQGAEDLKK
>CP022411.1|AZZ75401.1|2136164_2137580_-|cytochrome-c-oxidase-accessory-protein-CcoG
MSNQIPVHDVTPPSKNANNSVDLYASREKIYTRAFTGLFRNLRMMGGAALFLLYFGTVWLNWGGHQAVWWNLPERKFFIFGATFWPQDFILLSGLLIIAAFGLFFITVYAGRVWCGYTCPQSVWTWIFMWCEKVTEGDRNQRIKLDKAPMSANKFLRKAAKHSLWLLIGFVTGMTFVGYFSPIRELVFEFFTGQADGWSYFWVGFFTLATYGNAGWLREQVCIYMCPYARFQSVMFDKDTLIVSYDPRRGESRGPRKKGVDYKAQGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCAACIDACDSIMDKMDYPRGLISYTTEHNLSGQKTHKLRPRLIGYAVVLLAMISLLVTAFFMRSLVGFDVSKDRVLYRENAEGRIENVYSLKIMNKDQRDHTYVLEAAGLPDLRLQGKREIKVAAGDIVSMPVELSSAPEQLPSSTNEVKFLLKDADDDSVHVEAKSRFIGPQIR
>CP022411.1|AZZ75402.1|2138104_2139109_+|phosphoesterase
MAFNKFASVVLSICLLASVTSVQAITGTPKHMVFASDTQYPWTDKTDSGDFESGSEFETRSKWLVETQLASIADFRNQQGSQAQVPLMINGDITAFGHGWQRSFMKGMLDKYFKGEYLYGLGNHDYENNVDDCFSNSCAAGSIVEFKEHHEGKVDNFDLKVTGGFLSRTYSGSLAYSKTIGEVHMVQLNNEPTYTTRISHPLNPTTFEINDALDWLETDLRLARVGGYAIIINMHKPFGDKVSPAQNKRFLDMISKYQVTAIFAGHLHRDGGDAYWKGNVPMYLSGSTSQQTYLITSFTEDRKQLQIYLVKNNQWRDRTLIDTVEVHSIFARRP
>CP022411.1|AZZ75403.1|2139162_2140146_-|cytochrome-c-oxidase,-cbb3-type-subunit-III
MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDNDKQTAFANGQTGWTGVHEWEKEMARSDAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVVTNLDGRKLPEGIKADPANGGKLFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGEKAPEANAE
>CP022411.1|AZZ75404.1|2140142_2140328_-|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone
MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNKE
>CP022411.1|AZZ75405.1|2140333_2140942_-|cytochrome-c-oxidase,-cbb3-type-subunit-II
MKHEAVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRSALELEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKETAKKMEVLRTLGVPYTDEDIAGAQDAVKGKTEMDALVAYLQGLGTIIKSKR
>CP022411.1|AZZ75406.1|2140941_2142384_-|cytochrome-c-oxidase,-cbb3-type-subunit-I
MSTAISPTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPELNFGLPWTSFGRLRPLHTNLVIFAFGGCALFATSYYVVQRTCQTRLISDSLAAFTFWGWQAVIVGAIITLPLGYTTTKEYAELEWPIAILLAIVWVTYGLVFFGTITKRKTKHIYVGNWFYGAFIVVTAMLHIVNHASLPVNLFKSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWHKLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAIYHMIPRLFGRAQMHSVGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEALQASHPGYIVRALGGAFFASGMFLMAYNVWRTVRASNPAEAEAAAQIAVVGAH
>CP022411.1|AZZ75407.1|2142866_2143820_-|cytochrome-c-oxidase,-cbb3-type-subunit-III
MTTFWSTWICVLTIGSLIGLTWLLIGTRRGETKGSVDQTMGHSFDGIEEYDNPLPQWWFMLFAGTLVFSVGYLILYPGLGNWKGILPGYEDGWTGVHEWEKEMNKADAKFGPIFAKFAAMPVEEVAKGPQALKMGGRLFASNCSVCHGSDAKGAFGFPNLADSDWRWGGEAETIKTTIMGGRMAAMPAWGEVLGEAGVKNVAAYVRHELAGLPLPADSKADLQAGQQAFSTTCVACHGATGHGTEAMGAPNLTHPAGFIYGTSLTQLEQTIRHGRQGHMPAQNELLGNDKVQLLAAYVYSLSHGLNTEKLITEDNKK
>CP022411.1|AZZ75408.1|2143816_2144032_-|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone
MVFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPETTPAFETTQAPEPRSTRP
>CP022411.1|AZZ75409.1|2144037_2144646_-|cytochrome-c-oxidase,-cbb3-type-subunit-II
MKHETIEKNVGLLMLLMVFAVSIGGLTQIVPLFFQDVTNKPVEGMKPYTALQLEGRDIYIREGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGARYSDDWHRAHLYNPRNVVPESKMPAYPWLVTQAVDSSHTETKLKTMRTLGVPYTDDDISGAVASLKGKTEMDALVSYLQVLGTAIKSKR

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Crispr_ID: CP022411_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022411_5

2513937-2514041

Orphan

Consensus_repeat	Method
CTGTGGGAGCGAGCCTGCTCGCGAAGGCGGCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022411_5

>merge|CP022411|5|2513937-2514041|CRISPRCasFinder
CTGTGGGAGCGAGCCTGCTCGCGAAGGCGGCCTGACAGCCGACCTGTTTTTTGCAGATGTACTCGGTTCCACTGTGGGAGCGAGCCTGCTCGCGAAGGCGGCCTG

>CP022411|5|5|2513937-2514041|CRISPRCasFinder
CTGTGGGAGCGAGCCTGCTCGCGAAGGCGGCCTG	ACAGCCGACCTGTTTTTTGCAGATGTACTCGGTTCCA
CTGTGGGAGCGAGCCTGCTCGCGAAGGCGGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
CP022411.1\|AZZ75714.1\|2524039_2525065_-\|type-VI-secretion-protein	unknown	unknown	gnl\|CDD\|274530
CP022411.1\|AZZ75709.1\|2517247_2517643_+\|DUF4280-domain-containing-protein	unknown	unknown	gnl\|CDD\|379472
CP022411.1\|AZZ75710.1\|2517870_2518413_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225405
CP022411.1\|AZZ75708.1\|2515989_2517057_-\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270703
CP022411.1\|AZZ75702.1\|2510480_2511113_+\|glutamine-cyclotransferase	unknown	unknown	gnl\|CDD\|226708
CP022411.1\|AZZ75703.1\|2511235_2511427_-\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75715.1\|2525028_2526822_-\|type-VI-secretion-system-ImpG/VasA-family-protein	unknown	unknown	gnl\|CDD\|274541
CP022411.1\|AZZ79274.1\|2503141_2504257_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371775
CP022411.1\|AZZ75704.1\|2511625_2513122_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225107
CP022411.1\|AZZ75706.1\|2514475_2515075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225415
CP022411.1\|AZZ75711.1\|2518425_2520435_-\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|274542
CP022411.1\|AZZ75697.1\|2502688_2503135_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240044
CP022411.1\|AZZ75712.1\|2520505_2521438_-\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75705.1\|2513259_2513517_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|311697
CP022411.1\|AZZ75713.1\|2521496_2524037_-\|ClpV1-family-T6SS-ATPase	unknown	unknown	gnl\|CDD\|274528
CP022411.1\|AZZ75699.1\|2505247_2506819_-\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75698.1\|2504300_2505251_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370193
CP022411.1\|AZZ75700.1\|2506815_2509107_-\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|274542
CP022411.1\|AZZ75707.1\|2515199_2515967_-\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|180802
CP022411.1\|AZZ75701.1\|2509237_2510449_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP022411.1\|AZZ75715.1\|2525028_2526822_-\|type-VI-secretion-system-ImpG/VasA-family-protein	gnl\|CDD\|274541	TIGR03359, VI_chp_6, type VI secretion protein, VC_A0110 family. This protein family is associated with type VI secretion in a number of pathogenic bacteria. Mutation is associated with impaired virulence, such as impaired infection of plants by Rhizobium leguminosarum.	0
CP022411.1\|AZZ75709.1\|2517247_2517643_+\|DUF4280-domain-containing-protein	gnl\|CDD\|379472	pfam14107, DUF4280, Domain of unknown function (DUF4280). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 129 and 456 amino acids in length. There is a single completely conserved residue C that may be functionally important.	6.80219e-39
CP022411.1\|AZZ75710.1\|2517870_2518413_-\|hypothetical-protein	gnl\|CDD\|225405	COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].	4.06565e-20
CP022411.1\|AZZ75708.1\|2515989_2517057_-\|phosphotransferase-family-protein	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.46129e-95
CP022411.1\|AZZ75702.1\|2510480_2511113_+\|glutamine-cyclotransferase	gnl\|CDD\|226708	COG4257, Vgb, Streptogramin lyase [Defense mechanisms].	1.45382e-06
CP022411.1\|AZZ79274.1\|2503141_2504257_-\|hypothetical-protein	gnl\|CDD\|371775	pfam11876, DUF3396, Protein of unknown function (DUF3396). This family of proteins are functionally uncharacterized. This protein is found in bacteria and viruses. Proteins in this family are typically between 302 to 382 amino acids in length.	2.79151e-63
CP022411.1\|AZZ75704.1\|2511625_2513122_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.53393e-26
CP022411.1\|AZZ75706.1\|2514475_2515075_+\|hypothetical-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	3.23905e-47
CP022411.1\|AZZ75711.1\|2518425_2520435_-\|type-IV-secretion-protein-Rhs	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
CP022411.1\|AZZ75697.1\|2502688_2503135_+\|NUDIX-hydrolase	gnl\|CDD\|240044	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	9.46369e-41
CP022411.1\|AZZ75705.1\|2513259_2513517_+\|hypothetical-protein	gnl\|CDD\|311697	pfam07865, DUF1652, Protein of unknown function (DUF1652). This is a family containing hypothetical bacterial proteins.	3.29601e-16
CP022411.1\|AZZ75713.1\|2521496_2524037_-\|ClpV1-family-T6SS-ATPase	gnl\|CDD\|274528	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
CP022411.1\|AZZ75707.1\|2515199_2515967_-\|short-chain-dehydrogenase	gnl\|CDD\|180802	PRK07035, PRK07035, SDR family oxidoreductase.	0
CP022411.1\|AZZ75698.1\|2504300_2505251_-\|hypothetical-protein	gnl\|CDD\|370193	pfam08929, DUF1911, Domain of unknown function (DUF1911). This domain is found in a set of hypothetical bacterial proteins.	1.55334e-34
CP022411.1\|AZZ75700.1\|2506815_2509107_-\|type-IV-secretion-protein-Rhs	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
CP022411.1\|AZZ75714.1\|2524039_2525065_-\|type-VI-secretion-protein	gnl\|CDD\|274530	TIGR03347, VI_chp_1, type VI secretion protein, VC_A0111 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	5.29843e-86

>CP022411.1|AZZ75705.1|2513259_2513517_+|hypothetical-protein
MMNLVQLRAQLERSFSPLACECLVDGDHSLTVKLYHPVSGQVDLVISGLKLDALRTPEAVEALIEELRYELESNSLRLFRDPDLA
>CP022411.1|AZZ75704.1|2511625_2513122_+|helix-turn-helix-transcriptional-regulator
MSQEVLTTETNRRQLQQIIAGLSDGVILLELDQSILWANEAALAMHGVSRITDLGHNADEYAKKFNLRYRNNHSITAENYPISRVARCESFNDVLIEVSPTDDPERIWVHSVRSMILTDREGQPESLVLIMSDVTDWANAEQRFEKTFNANPAPAVICRLSDLRYIKVNPGFLEMTGYTREQVIGTSAYEIDIFEQAEKKDLAIQRLRDVATIPQMQAELRLPDGGSKQVIVAGQPLTLNDEDCMLFSFVDMEPRHRAEVALRQSEERFAKAFRLTPVPILICSADEQQVIDVNQAFLETLAYDSEDMLGKTVTQLDFIDDSGARTRLLAALEKNGRVDRVDVRVRKKDAELLECALSADTVNIQDMPCYLLVLMDITERKRTELELVAAIEEVMKDASWFSRTLIEKLANVKKVNSPQLPSVSFTDLTARERDVLGLICEGLADKEIAARLKLAPNTVRNHVATVYSKLDVHSRSEAIVWARERGLFAGDSSVKGQR
>CP022411.1|AZZ75703.1|2511235_2511427_-|hypothetical-protein
MTSRRNIEQTYRTWSSPILLELKKREHQMAPVERQALENVLVERRLLDIGNPDGIERRRNSGD
>CP022411.1|AZZ75702.1|2510480_2511113_+|glutamine-cyclotransferase
MKHANAEILREYGPFDDIKGIHGVTFDGQQVWFASDGQLNALDPTSGETVRTLKVGADGGTAFDGQHLYQIADRHIHKIDPATGRVLHTIPAPGNGGDSGMAWADGSLWVGQYRERKIHQIDPQTGEIQRTLESNRFVTGVTWVDGALWHGTWEGDESELRHIDPQDGEVLESLKMPAGQGVSGLEADGADRFYCGGGDSGRVRAVRRPQ
>CP022411.1|AZZ75701.1|2509237_2510449_+|helix-turn-helix-domain-containing-protein
MDSLINAAGRALSAGDPLGALNYVALRDDPPALALRAIAMAQLGDLPRAKALLQRAIKAFGSNEPLSRARCVVAEAEVALAARDLGWPVKALEAARRVLQAHGDGVNAAHARYLQIRRLLLIGELQEAETLLGETDPAPLPPALRTAHELIAAGIAVRRVQAHKARAALARAQAAAQQAGIAALRAEVDQASHMLAAPAARLSVAGQAQRVNLAQVEALFNSSTLIVDACRYSVRGAGMTVPLATRPVLFNLARLLAQAWLDDVARETLFATAFGFALTDESHRARLRVEIGRLRAALAPLASITATPRGFALVAADVALLTLPVEDKYAALLALLADGESWSSSALALALGNSQRQVQRALEALALVGKVQAFGVGRARRWMTPPMPGFATILLLPVSLGNG
>CP022411.1|AZZ75700.1|2506815_2509107_-|type-IV-secretion-protein-Rhs
MLDANASHITFTVEGANADLQVLSFTGREALNQPFRFDLELVSARPDLKLEELLHKPGVLTFGATGEGKIHGLVYRIEQGDSGKTLTRYSLSLVPQLAYLRHNHDQQIFQQLTVPKIIAQVLEDRGILADAYSFQLGAEYPEREYCVQYDESDLHFIQRLCEEEGIHFHFQHSSSGHKLVFGDDQTVFRKLKPVSYQQDSGMAADKPVIKRFNLRLETRTTRVSRRDYDFEKPKILPEGAVKTEFAPDLEDYDYPGRFTTRERGKFLSTRALERHRSDYKLAEGKGDEPTLTSGHFLTLAEHPHAEWNDLWLLLEVFHEGKQPQVLGENVTSDVTDNKSDFHQGYRNSFLATPWDAHYRPALEHPKPQVLGSQTAVVTGPAGEEIHCDPYGRIKVQFHWDRDGQSNDKTTCWMRVASGWAGAAYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHKENVVPYDLPANKTRSTFKTLSSPGGKGYNEFRIEDKKGAEQIYIHAQRDWDENIEHDQKIRVGNERHDTVEANTLSEFKVEEHRITHLDRISEMRADDHLTVGVTQHLKVGTAQFVEAGSEIHYYAGQKVVVEGAMELTAKAGGSFVKVDAGGVTISGAEVKVNTGGAPGVGTGIAILAPLIPGLAATDTAGNLMERAKTNPTWLELNLHYDNLEPVPGASYRVEFADGSTREGVLDSDGFARLEDVPKGPAKVYYGEDPRPYDRPAVAVVDASDDKIDEDLRKLGLDPATVDLQALVEKAAGRLA
>CP022411.1|AZZ75699.1|2505247_2506819_-|hypothetical-protein
MSEQTSSNDDRTGAYQEAAIELGKGIAMGAVPFLGQAIDVYDTIESAVLLYKSDTPGAKEDAQFDLLLAVIGWIPGAGDGLKKSMRIVNRNPQRFAPVLFDLLRFVLQECGIKTSPEELLSRIFNAGKLRAEMDDIISAIRSSSVYKGSPGWVQTAVVTVLATARDNMPAMLGIVEKRLIKWKGMQRNSSAASSGTSHPRRAEKPANRDSSVGTQGKDGASGTHSNRVESSKVGVQAPSSILNEGLGVSGEHIADYICAVEFGWGKDWDGHDKGADGKWLEGLPGATKTGKLSSGGSPKARHVLYKLSDGANGTGIDAVWRAKPANNGGEKFAIVEAKASREEDAPKFMRRANNTRKPGIASKLGESGISGVTRIADASQLLEPIEDTPEAGASKPSTSMRTGKNKPQASSRSPAPSAKIKEILVQMSSQWITQNLNKAVAGRALAAQVLASYSRHLFYSPLYHSSASPKDHAEARFQNLAESTHRTHKAFHYNETEVKAAVNKRKKSLAKKYGARDSLKLEA
>CP022411.1|AZZ75698.1|2504300_2505251_-|hypothetical-protein
MTSMSKRQKFFSDHQYNHFLKEHDEVIEFFKTNRFKSDSDEEEASQRARYFQSLALDKLLATYTAGMDIESLVPLLEDLIEKYEVRQQTLADFEGAPQISPLAIDDWPDQYEEAVQVIGLCILLHRNDLLVRFVKMLDNAGYAGDDTLFEDLLKKVLPNRHDVDQWYHDVYTPLIQAIYADTREEASALLKKYCQGWYPAFKQAPWHDTHLQGEDGNYVGYWAIEAAAIAFLYGIDDSKVDHMVYPKDLVDYARNHQSPRMTQVGRIVAGDACSRTGYWFTPAQANSRRHFQQGELMPKINDSRWGDTLWYWSGEV
>CP022411.1|AZZ79274.1|2503141_2504257_-|hypothetical-protein
MNNLSEQSANLTFELPDNTPVVRLGLIATLYFKEGYSLQSKRNVMQCFTRFKEEFGQHLKGQFDDRYKKLTDSGFSKTQEKIRESGPNEQYEWHISSAATANEAAAYSLSALNSFEMHGDQKRSYLKMTLPWSFLKEPDGVARFEEWLVYLCDQVEAEHGYGGLSSILPYDFDRYMPMEFQLAQQYVGLEVDSMVHNFKRELLDHIKGVNWYTIVGTRFTEQLGGKDGLRHALSGRGDVEMLDYQGGLIIRAGALPELGAIHEPLPVTYVAVNRVLKQLRNPKPDQLHTYSPYGNCFEQDSTERWYARFDQDDAHSKTPARIEAGQPCSAAGYWFSPAQANSRRYFDLGEIMPRFSGSNWGDTLWYWSGEA
>CP022411.1|AZZ75697.1|2502688_2503135_+|NUDIX-hydrolase
MAEHRIRALALCVFHHNGKILVNEFRDPVSQQTCFRPIGGGIEFGETSAETIVREVQEELGLTMTDMRLLGTLESLFVYNGKPGHEIVQVYDATFVDQGVYDHAQIDGHESDGAPFTARWHDSSSFSEQAPLVPKGLQELLRSTGLLG
>CP022411.1|AZZ75706.1|2514475_2515075_+|hypothetical-protein
MLVADLVGTAVFAVEGAIAAMRSQLDLLGVMVIAFIVALGGGVTRDLLIGATPPNAVADWRHPALAFFMGGLAFVFHEQVLGWSGSTLIVLDAAGLALFAVAGAQKALNFGITPFVAMLMGTITGVGGGVIRDIVLARIPVVLQVDLYASSAFVGAAVLIVARRLGVSPVAAALLAGAGCLTLRLLSVHFGWQLPKVIA
>CP022411.1|AZZ75707.1|2515199_2515967_-|short-chain-dehydrogenase
MSKTQLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQHVADAIIAAGGKATAVACHIGEMEQISQVFAGIKEQFGRLDILVNNAATNPQFCNVLDTDLSAFQKTVDVNIRGYFFMSVEAGKLMRENGGGSIINVASINGISPGIFQGIYSVTKAAVINMTKVFAKECAQFGIRCNALLPGLTDTKFASALVKNDAILKQALTQIPLKRVADPSEMAGAVLYLASDASSYTTGVALNVDGGFLS
>CP022411.1|AZZ75708.1|2515989_2517057_-|phosphotransferase-family-protein
MALTDQSTRIRSGEELDASLIDPYLKAHIPGLSGTPAISQFPGGASNLTYLLEYPEQEFVLRRPPFGHKAKSAHDMGREFRILNQLRDGFPYCPKAYVHCIDESVIGAEFYVMERVKGIILRSELPPELGLDSAKTEALCKSFIDRFVELHRVDYNACGLGDLGKPEGYVARQIKGWSERYEKALTPDAPHWEKVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPHNPMQIIGVLDWELTTLGDPLMDLGNTLAYWIEADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGLQIDNFDFYYTYGLFRLAGIVQQIYYRFYHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL
>CP022411.1|AZZ75709.1|2517247_2517643_+|DUF4280-domain-containing-protein
MGCPQVCATATLQCSFGAAPSMLNVLPVNRTLTGGMPAANIMDHIPLVNILPFGVCMSMANPMVAAATAAALGVLTPMPCIPATATPWIPGGAPTLLLGGMPAIDANSTLMCNWAGVIKIVVPGQMQMLIP
>CP022411.1|AZZ75710.1|2517870_2518413_-|hypothetical-protein
MAIKPLDLQQNDKQLKGRLQDGQLDGPLNIKDDGRKQADLHYSQGELQGTSLLYHPNGKVCAQMPFVRDKLQGVASFYAPEGFLQRKATYRRGLLHGEAFNYFPDGQVAEAEFYRDGVREGRYQRFHPNGKPAVEARYVNGQLLEPEQGFAEDGRPLGADGKPISRVRWWYRQWADPQQA
>CP022411.1|AZZ75711.1|2518425_2520435_-|type-IV-secretion-protein-Rhs
MPRSTDSSTSFSLTATSLSALYPESLCGEEALNGLGSQILSGLNDGASLTLTSAVATHVTTTLHNDAQLRSFDALVAEIRQLPADATAERYQLLLRPWLWWLTLASNNRVFQNLATSDIVTTIFKAHGFSDFKLSLTGSYTPREYCVQYGESDFAFVSRLLEEEGIFWFFTHDDGQHTLVLGDSNAAFVPIPNGPKVSYLGQGLGERELHGIRSGQVCLQAVAGVYRATDYEFTTPTTSLYGQAEAVAGPRSIYEHPGGYNAKARGDALTKQRVDGLRSEEKRFVGESDCRWLVPGHWFTLEGYDDASLNIDWVVTRVTHDASHDSYRNRFEAIPKATPFRPQRVTPKPRMHPQTAIVVGKSGEEIWTDEYGRIKLQFPWDRDGKNDETSSCWVRVVLPWSGKGFGMQFIPRIGQEVIVTFIDGDPDRPLVTGCVYNGDNALPYALPANQTQSGIKTQSSKGGGGFNELRFEDKKDAEEVFLQAQKDFNINVLNDTTATVGHDETLTVQNARTRTVKDGDETVTLEKGKRSVTIQTGSDSLDVKDSRTVKVGADQNHSTGGNYTDKVTGDYSLTVDGNLTIKVSGTLTLQSGGSFTIKSGADLATSASTSITHKAGTALTNQAGTSLDNKAGTTLTNDAGISLTNKGAASQTVDGGGMLTIKGGLVQVN
>CP022411.1|AZZ75712.1|2520505_2521438_-|hypothetical-protein
MTMSTQAFNLYLHECAGTMVQHANEVEGGLASALQKRHKIRDTDLNTIFDAANERLDNTYSRIYLVYLLLLYAGAAYENVEGIVSAARYNIGNSMVTPHWGDKPYKLSSIYEYEPMNLFPGWSLTNTRNNSSMLDPHMILKHLNGTISNELSGLDQSSVTATPPSIKQSRAIFPSDGNASKLQSSNQHPNSRARSNSAYSKQLVSMEADWKSRLTSIENKNIVKNSKAQTLLKFNTLKMELTKTTDGGNKHYQRLLASITVNLTNTHEAYKAIAAAQSKWLAARSEMMAYLEQTITDISQFTDDTEVSLP
>CP022411.1|AZZ75713.1|2521496_2524037_-|ClpV1-family-T6SS-ATPase
MELASLIGRLNPDNRRALERAAQRCLQRGHHFVEIEHLLLELLDIEGGDLAFLLPRFGLERDALTAEINKALDLFKAGSTRTPALSSHTLGLLEDAVVQASVLGLDSIRSGLLLLALIDRDERRSLLLNSASSLLRIPKEALRANLLEWTENSREHVGARPGSSANSAPRRDSVLDQYTQDLTADAHAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAGDVPPSLQEVSLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSADKPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAATTWMEYKKYFEKDPALARRFQLVQVEEPDEITAVEMLRGVAAKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTACARVALGQHDVPPPLESLRHRQQSLKEEVDRLRREQATGLDHRERITLLESESKTNVQAIRELETRWGEERVAVRELLDTRRELLTLSERADSDKPDEATDSRIDHLAAELLRLEAGLDAIRQDDPLVPEQVDTKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQSTALNTIAQRLQAYRAGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVVDFKNTVMLATSNVGAELLLDTPVAQLGSEAFNEALHKVLLQAFRPAFLARMTVVAYRPLDEATLEGIVLAKLEKLRGRYKAATGKQFEFDSGIVKAVLAKCSAAGARDVENVLMTQVTGKLAEWVLE
>CP022411.1|AZZ75714.1|2524039_2525065_-|type-VI-secretion-protein
MATPSRHAPVALTLSQRLRREPQAFEWLQALLLLEREQPQADLLGSGTSPQTEALKLRGPLTPAFAASQIEALHEEPGEPLTLDTPIFGLGGPDGPLPYAYQDWLQQRARAKDHAPAAFLDLFQHRLLSLLYKVMRKHRVALGFVTPGASPVQAQLRALTGLLPKALQERQAVPDCAVLACTALFADGRRSLAGFAAIVREQFGVPVELSAYEGAWRQIPPASRSVIKPGGRNLQLGRSAVAGTRVWDEHAGIRLTLGPLPSIQAARFLPDGESHPALASLAGLYFGPDLDVRLVLRVRGAGPLKLARQTPVLLSWNGGLQRQASLGVQTIETRLRQLEIT
>CP022411.1|AZZ75715.1|2525028_2526822_-|type-VI-secretion-system-ImpG/VasA-family-protein
MSDSIDPQLLDYYQRELTWLRHAGSQFAERYPKVARRLELSPGECPDPHVERLLEGFALLAARLQRRLDDDYAEFSDALLEQLYPLAMRPLPSCAIVQFEPDPSKGNLDDGYTLPRDTPLFVTTSKGESIHFRTSAAVRLWPIEVSETLLLGSDEAQALTGVAQARSALRLSLRCLGESQWADLGIEQLRIHLAASPVVNACLYDLLGAHAVQVLAGSPGSVPTVLKGLPNIVGFSDDEALLPDEDGVHPGMRLLAEYFAFPDKFHFFDLPLRGVSSDSQTLYLYIVFDRAPASRLHLQASDITLGCAPVINLFPRTSEPLRPDGTRSEYRLIADSHRENSVEIHSIRGMRASTRTGVQRLPAYYGSQHSAGDQQRYWHARRVNGMTPNRLGSDLLVSVVDTRFEPQTDLPDYSLTAELLCTNRYLAQSLPAGTPLGFERPGPVAWARLRNSPSAQSLPRLDGDSRWRLVSQLTLNHLSLVEGPQALDALKEILHLHNLRDEASALRQIEGLLQLSCERVIGHVGADAWRGWRNGLEVQLQLDPQHFVGSSAVLFSAVLAQFFSLYATANRFVRTVLMQSDKEVKAWQPQAGMPLSL

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Crispr_ID: CP022411_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP022411_6

2792213-2792307

Orphan

Consensus_repeat	Method
TGTGGGAGTGAGCCTGCTCGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP022411_6

>merge|CP022411|6|2792213-2792307|CRISPRCasFinder
TGTGGGAGTGAGCCTGCTCGCGATGACGACCTCACAGCCAACCAACCTGCAACTGACTACCCCCAATCCAATTGTGGGAGCGAGCCTGCTCGCGA

>CP022411|6|6|2792213-2792307|CRISPRCasFinder
TGTGGGAGTGAGCCTGCTCGCGA	TGACGACCTCACAGCCAACCAACCTGCAACTGACTACCCCCAATCCAAT
TGTGGGAGCGAGCCTGCTCGCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP022411.1\|AZZ75935.1\|2786394_2786688_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
CP022411.1\|AZZ75946.1\|2795348_2796023_+\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75943.1\|2792998_2793445_-\|type-II-secretion-system-protein-GspH	unknown	unknown	gnl\|CDD\|130769
CP022411.1\|AZZ75944.1\|2793565_2793997_+\|general-secretion-pathway-protein-GspC	unknown	unknown	gnl\|CDD\|378647
CP022411.1\|AZZ75948.1\|2798743_2799103_+\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75945.1\|2794132_2795356_+\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75939.1\|2789648_2790314_+\|TonB-dependent-outer-membrane-receptor	unknown	unknown	gnl\|CDD\|198033
CP022411.1\|AZZ75942.1\|2792393_2793002_-\|type-II-secretion-system-protein-GspJ	unknown	unknown	gnl\|CDD\|227132
CP022411.1\|AZZ75949.1\|2799282_2800224_-\|aromatic-alcohol-reductase	unknown	unknown	gnl\|CDD\|187569
CP022411.1\|AZZ75938.1\|2789126_2789441_-\|hypothetical-protein	unknown	unknown	unknown
CP022411.1\|AZZ75937.1\|2788556_2788997_+\|alkylhydroperoxidase	unknown	unknown	gnl\|CDD\|225039
CP022411.1\|AZZ75941.1\|2790893_2791832_+\|iron-dicitrate-transport-regulator-FecR	unknown	unknown	gnl\|CDD\|226235
CP022411.1\|AZZ75933.1\|2784823_2785537_-\|ATPase	unknown	unknown	unknown
CP022411.1\|AZZ75950.1\|2800320_2800779_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
CP022411.1\|AZZ75936.1\|2786811_2788245_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|224089
CP022411.1\|AZZ75934.1\|2785751_2786156_-\|cupin	unknown	unknown	gnl\|CDD\|380362
CP022411.1\|AZZ75951.1\|2801097_2801502_-\|type-II-secretion-system-protein-GspI	unknown	unknown	gnl\|CDD\|273767
CP022411.1\|AZZ75947.1\|2795997_2798325_+\|recombinase-RecF	unknown	unknown	gnl\|CDD\|213207
CP022411.1\|AZZ75940.1\|2790310_2790862_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
CP022411.1\|AZZ75932.1\|2783159_2784458_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274229

Protein	Function_ID	Function_description	E-value
CP022411.1\|AZZ75935.1\|2786394_2786688_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	2.17011e-14
CP022411.1\|AZZ75949.1\|2799282_2800224_-\|aromatic-alcohol-reductase	gnl\|CDD\|187569	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs. PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.37135e-74
CP022411.1\|AZZ75943.1\|2792998_2793445_-\|type-II-secretion-system-protein-GspH	gnl\|CDD\|130769	TIGR01708, Type_II_secretion_system_protein_H, type II secretion system protein H. This model represents GspH, protein H of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	3.48731e-26
CP022411.1\|AZZ75944.1\|2793565_2793997_+\|general-secretion-pathway-protein-GspC	gnl\|CDD\|378647	pfam11356, T2SSC, Type II secretion system protein C. This is the greater N-terminal region of GspC-type proteins. GspC proteins form part of the sophisticated transport mechanism of Gram-negative pathogens for injecting divers proteins into their hosts, a type-II secretion system - T2SS. The region is made up of a short N-terminal cytoplasmic domain that is followed by the single transmembrane helix, a Pro-rich linker, and the so-called homology region domain in the periplasm. This inner membrane GspC interacts with the outer membrane secretin GspD via periplasmic domains, an interaction which is critical for the effectiveness of type II secretion.	5.04631e-07
CP022411.1\|AZZ75939.1\|2789648_2790314_+\|TonB-dependent-outer-membrane-receptor	gnl\|CDD\|198033	smart00965, STN, Secretin and TonB N terminus short domain. This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.	9.69527e-08
CP022411.1\|AZZ75942.1\|2792393_2793002_-\|type-II-secretion-system-protein-GspJ	gnl\|CDD\|227132	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion].	9.38653e-22
CP022411.1\|AZZ75950.1\|2800320_2800779_+\|transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	5.79883e-28
CP022411.1\|AZZ75937.1\|2788556_2788997_+\|alkylhydroperoxidase	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	5.80872e-28
CP022411.1\|AZZ75941.1\|2790893_2791832_+\|iron-dicitrate-transport-regulator-FecR	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	6.76114e-63
CP022411.1\|AZZ75936.1\|2786811_2788245_-\|DNA-binding-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	7.64423e-133
CP022411.1\|AZZ75934.1\|2785751_2786156_-\|cupin	gnl\|CDD\|380362	cd02234, cupin_BLR7677-like, Bradyrhizobium japonicum BLR7677 and related proteins, cupin domain. This family includes bacterial and fungal proteins homologous to BLR7677, a Bradyrhizobium japonicum protein of unknown function. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	5.06993e-48
CP022411.1\|AZZ75951.1\|2801097_2801502_-\|type-II-secretion-system-protein-GspI	gnl\|CDD\|273767	TIGR01707, Type_II_secretion_system_protein_I, type II secretion system protein I. This model represents GspI, one of two proteins highly conserved at their N-termini and described by pfam02501 but easily separable phylogenetically. The other is GspJ. Both GspI and GspJ are proteins of the type II secretion pathway, or main terminal branch of the general secretion pathway. This pathway carries proteins across the outer membrane. Note that proteins of type II secretion are cryptic in E. coli K-12 - present but not yet demonstrated to act on any target.	3.43671e-16
CP022411.1\|AZZ75947.1\|2795997_2798325_+\|recombinase-RecF	gnl\|CDD\|213207	cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50. The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.	3.44644e-07
CP022411.1\|AZZ75940.1\|2790310_2790862_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	5.52831e-20
CP022411.1\|AZZ75932.1\|2783159_2784458_-\|hypothetical-protein	gnl\|CDD\|274229	TIGR02608, hypothetical_protein, delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.	0.000358213

>CP022411.1|AZZ75941.1|2790893_2791832_+|iron-dicitrate-transport-regulator-FecR
MNIFRLTPAEPSAADNLHSEARDWLVLLTSGRATVADARALREWCARSAEHARAFEEAKRLWQQLQPAVEQMQAPRGFGRRAFLGGAIAASAAFLLVRGTIPGGFEGLGADYITEVGQQRRFEPMQGVSLELNTQTRINQRSIDNGVQGFELVSGEVEVQTARLPLAMQAGGGWLRASQARFNLRNTDQQVCVTCLDGAVEVDVDGRSLRLEPGQQVTYDARQVGSVQSVDTTAVMNWRQQVLVFNGATLSQMIDEINRYRPGMLLLLNRELGQRRVQARFSLDQLAGVALLIRDAYGVKCTELPGGVVVLS
>CP022411.1|AZZ75940.1|2790310_2790862_+|RNA-polymerase-sigma-factor
MKDTGQGSMVQLFLTSYEDFRVRLRRRLGSEDLANDVLHETYLRVDRMETPPNVLRPNAYLYRMALNIAADRRQADARLLTGEEVEELLQIGDEALDPARVVGGQKEIQSLLSALYELPARRRKIFIAARLEEAPHLEISQRFGISTRMVEKEIKAALGFCAAKLERKVFQRFGRGAGKPSSE
>CP022411.1|AZZ75939.1|2789648_2790314_+|TonB-dependent-outer-membrane-receptor
MCLGWLLGCAAGHAMADTVPADLRMTLHIPAQDLAHALDQYSHATGVAVLVDSQLSRGRRSLAVDGEYTAADALRRLLGGSGLMARYARDDAFTLQVAQVEDVAAPPQKQTPESVAVNRSYATAVQAAIERNLCRSPLTRPGSYRAVLQVWVGRDGLVQHNRLVTSTGDVRRDNALVESFRNLKIDRPTPSALRQPVTLLLLPESSGKRMECTKWEGVSGG
>CP022411.1|AZZ75938.1|2789126_2789441_-|hypothetical-protein
MKTLWRLSLGGLLLMALSSAYAEQPLGCVEVTVGGYKAPNYDCLSQQMGNNPEGAAAAEKNQEALNVPVNKRPPNQVGLATPAATSTRMGNTFGTSVKPQRPPQ
>CP022411.1|AZZ75937.1|2788556_2788997_+|alkylhydroperoxidase
MSPRLDYYNASPKAMKAMIAMEALTANLSIEQPLLQLIRIRASQLNGCAFCTDMHSVDARRAGESDRRLYAIAVWRDSNFFNPRERAALAWAEAVTLLAESRVPDDVYEQAREQFSEGEMVDLTMAVTTINSWNRLAVSFRQTPSD
>CP022411.1|AZZ75936.1|2786811_2788245_-|DNA-binding-protein
MELHVVINGRKDLAGQLYQQLRGAIESGRLAAGTQLPPSRLLAEQLGISRKTISDTYAQLTYENFLTGVIGKGTYVNARPAQVQRKQSHTELASAEVIESWRNLPVFLRHPTLEGSLRYDFIGGATSKGQFPQDDWRRCVAHAMRQMSQSKGFYSVAEGLPALRNAIARHIAFSRGINCQDEDIVVCNGAQQALDLITRVLIRPGSRVAMEDPGYPPARLLFGTHGAEVVGIPVDAEGIQVEQIPDGTRLIYVTPSHQFPLGVPMSQARREALLVRAHELGAIIIEDDYDSEFRYEGRPTDSLFNLDQRGIVAYVGTFSKTLLPELRLGYAILPPAILEAVIRAKQLTDLHASTLPQWALAKFIAEGCLLKHIRRCHAIYAQRRERILARMADDLSPWLEAVPASAGFHMAVFCKVPIDLPLVIELAKKVEVGLYSINGFYHQQPAKNGLYFGFGAIETLDIDIALDRLRDILQQVA
>CP022411.1|AZZ75935.1|2786394_2786688_-|antibiotic-biosynthesis-monooxygenase
MSNEVINTVQVQAAAGRSDELGRQLQKIVETLRETPGCDSYLVDRCPEDSHRWTVSARWQSEAAMQAHFNRPEAQGFIDLIDSRLANSVDFNSFPIV
>CP022411.1|AZZ75934.1|2785751_2786156_-|cupin
MKALPFFAAALALSLCTSAAFAHDPSEKVTVLQDQMLKNAPGKKAMMIEVDYKPDQSSIAHKHDGTAMAYVLEGEVISQVKGEQPITYNKGQFWYEPAGSEHLVSKNASQTKPAKLLVFMVLAPDEEVLIPLKN
>CP022411.1|AZZ75933.1|2784823_2785537_-|ATPase
MKLALTSVLAISVLALSACSVPTAPQAVSSLDTLLPHPTGRSSATQVKSGPGVSLGVVYSPSTQTNREYLRDYQANAGTGFGQSLLVQPIHDAYVASSKPDMAVEWVNASLQRQFGSVTVYPDMQSLRAARPDVVAIVDTHSQLITSRSSDIKADVSADFYDAQLNYIGTAKGSDARELTPVWADFKGSEEIVADINQQQDVQVRALQKFDQSLSNLVAMPANKVSMLNSQHGQKLY
>CP022411.1|AZZ75932.1|2783159_2784458_-|hypothetical-protein
MSNIINSANVEALDPTFGSDESGVSWLKYPDGTNGFVWGITVAPDNKLLIAGRAGKRFSIVRLKTDGRQDPDFGDQGSVIGEFAVGDLSTGRGVRVLKDKTILLEGWFEYDPSSPLLRGLALFDDKGMPVKAFGNDGVLIVDPISTPAYRLSKEEIANKDASTSREGGHSIELPDGKLMIISNHLYSFSDNIGLLIRLEKNGSLDMDFHEKGYVAVQYLANYTTANSLIRLQDGSFVVGGNTAVEGKMMPMIARFNAQGEIIKEFGNKGFVVIETDQHSGGTSQLIELPDGNILGIGSTSSDGIQSGLLFCIDNKGALVSSFNQGEPLITAYPRAPLGIQWHQGTLRQGKHIMVIADTLGEEDSKTIMAKFDLDGVQDTHFADKGFLTINLTDVLDLGVSIATQNDQIIGAGASLPHADGVRGFAFRCSELV
>CP022411.1|AZZ75942.1|2792393_2793002_-|type-II-secretion-system-protein-GspJ
MKRQQGFTLIEVMVAILLMAVVSLIAWQGLDSVTRADSHLQASSEQSDGLLRALNQLQRDVEMRAGIELTEPKKVGVDDEPPSAPPALTVRSSASKGFRLDIIRTAADQPGALQRVRWWVKGDTLYRAVAEARSRYPLPAPGNGVAVLQDVSDVQVRVWEVDKGWRQLSGNRREDPLGLEIRLSRGTAQGVEKYRQVIGPLE
>CP022411.1|AZZ75943.1|2792998_2793445_-|type-II-secretion-system-protein-GspH
MNRQQGFTLIELMVVLVIIGIASAAISLSIKPDPLQLLRKDAERVAQLLQVAQAEARADGRPIVWVSDAKGFRFSRRSDSGKGFDHFAQDPQLRPRAWQSPKMEVRVEPKQRVVLNAEWINPPLQLTLSDGLNRLSVLRDDSGRISLQ
>CP022411.1|AZZ75944.1|2793565_2793997_+|general-secretion-pathway-protein-GspC
MTFTARVSPPQMVQALALLAALVGVATWSSLLLTSAESHTPAAAPQLLAARSDSPALQWFSNQTAPMDIKVSGVMAGSRGAVAILSLNDGPPRSFLQGEKVGPGVKLVAVEGDGVVIEQGGERVRLGVERLGEGVVLPRLVRP
>CP022411.1|AZZ75945.1|2794132_2795356_+|hypothetical-protein
MSELTEPNSAISSWSGFVYQGKVALYHSLKLIIKNELDFELQLDSTDDFAIYKNGKLLSVHQVKAKVGSTRGSYTKALIKSAEIDEHRKTGTNRYFHVSVKIDDTSDYKPGNGEVVKFYEYNGQPYCGLGEIEKITKDLIRTIFNDAKGVLPTERLTDQNYSLISEIISSKAIEIHKINQVDGVSESKAAFENRIHASELLTELLSEGLQNDVEYFATELRKNLFDYLEKTLDDLLPEINDKQYLRAQDLFVHLHSLNSDDLQRLCQVMKPSESFSKIQHEDIGRYSELIQDFCIAPVLQRLPHYMGSDSSFYLPTALTLLNDRECRACVDRIRTEMKNNRRLQPLLFEYRNLIAFSALKSFSVETKITENDGSDPKYEAENQDDKITRELSVNVITKQDAEGKLNA
>CP022411.1|AZZ75946.1|2795348_2796023_+|hypothetical-protein
MLRGIISSALAEQAFSLIHATEQSSYFFRLHEDAARFAIVHEMTVLQSPESLNEAASLSAPKEFVEHPAFKKNCDLICLLKLGSLAEFKELEDRIFAIEEDAYHYKKYVLYYTKDEEDCLEGFEFGDLLRAISDKSQFDLYKKSPLSSSAYSIAAKIFIKIPFLVLSHEKRELVPLKLQAEAAVAESELTGLYRKVQELPEVDDVAIDDLIKELMKNELENIPD
>CP022411.1|AZZ75947.1|2795997_2798325_+|recombinase-RecF
MSWKISRIEIASFKAFKNISLDLESASLLTLDGPNGFGKTSIFDAIELLLTGKIARIQRLFDKVMIGTKKKYEDNLFWNVRSQGNDLHIKIEFQSGDKKIVLARHAPSESLWPKDKNKANDFSLFKLYKLGSFESTDFNDENIKDDSLIAELFGQGFQDNYSFLNYLEQGQNEYLFSTSLNNRKKALESLIQSGAVVSEIANCKRLEKKLTQKLSKERQEEESRLDREGEALRTMLESGLEGAVYERVSTADIRPGWDAEVLFSGYSKEIHDDYVAEVRGIIELLPLKQAIKIRVSNEKIENYISKNNNLLRALIQVGKTTEEFTALSVIKSNIDSLSFSLSTLEKGAASIGFDEIRTTPGWKPGEFVELEEQIKSRDLLNTSSAANAEVIAEISKLKNELLEKHFNIYPNETTCPLCSQDWQTHGKLLSVIEERSAKLSETLSEDGKKLVQVIESIGNVLLVLIERVTNDLKLERSSYDSDLHEVLRRHKEIIQRIRELGGQLTRRGIPYPDTYTVDPEEEEKRLADLIASFRAQKQEEIVDIPDQWRSVILNAFKDEADFYVLGREALEVKLKYISLRANEAKSATLEGINKRLNALRKENAAINRIKGRIVSLRSTLERVEKTYSDHTISEIELIFHVYSGRLIQNYQRGLGLFIESKEGNQLRFATAEYSDHDAMLSMSSGQISALSLAFFLSLNRVYSSVPIIMIDDPSQSLDEVNIASLTDLLRCELKDRQLIVSSHEDDVSSYMRYRFTRAGLLPLTFNMQALAREAG
>CP022411.1|AZZ75948.1|2798743_2799103_+|hypothetical-protein
MIKPTPNPPETDSVSPYESIDSKKLHEAADRALDHYLCPPGSTPPPRKNRGMYAVTADNKTEELLVDASATLASAKTIAQNVSSLLPASQRHALAGIAQLIMLGELAVNRALDNLQLPE
>CP022411.1|AZZ75949.1|2799282_2800224_-|aromatic-alcohol-reductase
MTAATHPSPQSILVLGAGELGLPVLRNLARVAKRSPGSTISVLLRDSTINTQAPEKKLEVDELRSLGIQLVAADLVNDSIEQLAEVFAAFDTVIGCAGMVAGRETPMKLATAALKSGVKRYFPWQFGVDFEVIGRGSPQDLFDAQLNVRELLRAQDKTEWVIISTGMFTSFLFEPVFEVVDFDNHTVNALGSLETSVTLTTPEDIGKLTADIVFFEPRFRNEIVYLSGDTVTYGQVASLLERVLGRPFKRNVWTVPYLMQELEKDPTHHIKKYRAVFAQGRGVSWPKAGTFNEQQSIQVTTAEQWARDNLAVD
>CP022411.1|AZZ75950.1|2800320_2800779_+|transcriptional-regulator
MTDEETLSQAEAICQTLRRDDDGVRREVLAHAGSRWSLGILHALGVYGTMRHAEIKRQMTGVTQRMLTKTLRALERDGLLIRRELDQVPPHVEYELTALGMELLVRMSPIWTWVVEHVDDFREARRAFDGQSGKKPSWQVPVVGLVDLDGAD
>CP022411.1|AZZ75951.1|2801097_2801502_-|type-II-secretion-system-protein-GspI
MGFGRFMRARSREAGFTLIEVLVALAIIAVAMSAAVRVAGLMTQSSGVLRDRSVAMIAAQSRMVELRLEGKLPMGMKVQDCDQGRLLLRCEQLISAAENGRLLKIGIQVFDRNQDAPPLARLETLLSRTESPSP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP022411_7	7.1\|5822844\|25\|CP022411\|CRISPRCasFinder	5822844-5822868	25	MN927225	Escherichia phage vB_EcoS_XY1, complete genome	7320-7344	5	0.8

1. spacer 7.1|5822844|25|CP022411|CRISPRCasFinder matches to MN927225 (Escherichia phage vB_EcoS_XY1, complete genome) position: , mismatch: 5, identity: 0.8

ctgttgcggctgattctgcgatgga	CRISPR spacer
catcggcggctgattctgcgatggt	Protospacer
*  . *******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1278691 : 1392372

116

Pseudomonas_phage(55.36%)

lysis,protease,tail,holin,tRNA,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ74628.1\|1278691_1279510_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	8.6e-08	33.0
AZZ74629.1\|1279629_1280034_-	Fe-S metabolism protein SufE	NA	NA	NA	NA
AZZ74630.1\|1280030_1281236_-	cysteine desulfurase CsdA	Q2XUY6	environmental_halophage	3.7e-68	35.8
AZZ74631.1\|1281343_1282378_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZZ74632.1\|1282411_1282774_-	arsenate reductase	NA	NA	NA	NA
AZZ74633.1\|1283068_1284700_+	Na+/H+ antiporter	NA	NA	NA	NA
AZZ74634.1\|1284692_1285400_-	peptidase M12	NA	NA	NA	NA
AZZ74635.1\|1285587_1286787_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
AZZ74636.1\|1286830_1289533_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
AZZ74637.1\|1289574_1290357_-	type I methionyl aminopeptidase	NA	NA	NA	NA
AZZ74638.1\|1290730_1291468_+	30S ribosomal protein S2	NA	NA	NA	NA
AZZ74639.1\|1291658_1292522_+	translation elongation factor Ts	NA	NA	NA	NA
AZZ74640.1\|1292730_1293474_+	UMP kinase	NA	NA	NA	NA
AZZ74641.1\|1293470_1294028_+	ribosome-recycling factor	NA	NA	NA	NA
AZZ74642.1\|1294042_1294798_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	5.0e-18	38.1
AZZ74643.1\|1294797_1295604_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
AZZ79250.1\|1295600_1296791_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
AZZ74644.1\|1296845_1298198_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
AZZ74645.1\|1298272_1300648_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AZZ74646.1\|1300693_1301197_+	hypothetical protein	NA	NA	NA	NA
AZZ74647.1\|1301200_1302256_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AZZ74648.1\|1302362_1302803_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AZZ74649.1\|1302799_1303576_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AZZ74650.1\|1303578_1304709_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
AZZ74651.1\|1304720_1305347_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.3e-27	39.5
AZZ74652.1\|1305423_1308945_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	5.6e-197	36.7
AZZ74653.1\|1309084_1310032_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AZZ74654.1\|1310164_1311493_+\|tRNA	tRNA lysidine(34) synthetase TilS	A7IXR9	Paramecium_bursaria_Chlorella_virus	9.1e-07	24.7
AZZ74655.1\|1311767_1313399_+	CTP synthetase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.5e-157	52.9
AZZ74656.1\|1313404_1314250_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	7.9e-49	42.4
AZZ74657.1\|1314407_1315697_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	6.3e-138	59.7
AZZ74658.1\|1315868_1316147_+	cell division protein FtsB	NA	NA	NA	NA
AZZ74659.1\|1316143_1316851_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
AZZ74660.1\|1316995_1317892_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZZ74661.1\|1318008_1319121_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	6.2e-33	29.8
AZZ74662.1\|1319217_1320063_+	S-formylglutathione hydrolase	NA	NA	NA	NA
AZZ74663.1\|1320107_1320581_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
AZZ74664.1\|1320577_1321636_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
AZZ74665.1\|1321623_1322373_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.7e-67	52.6
AZZ74666.1\|1322372_1323050_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.0e-43	49.8
AZZ74667.1\|1323262_1324132_+	peptigoglycan-binding protein LysM	A0A0S2SXL7	Bacillus_phage	6.5e-06	33.3
AZZ74668.1\|1324238_1325246_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	5.0e-34	35.8
AZZ74669.1\|1325756_1326080_-	ferredoxin	NA	NA	NA	NA
AZZ74670.1\|1326243_1328826_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.8e-27	23.8
AZZ74671.1\|1329066_1329816_+	DNA-binding protein	NA	NA	NA	NA
AZZ74672.1\|1329782_1330271_+	hypothetical protein	NA	NA	NA	NA
AZZ74673.1\|1330831_1331212_+	hypothetical protein	NA	NA	NA	NA
AZZ79251.1\|1331267_1331450_+	hypothetical protein	NA	NA	NA	NA
AZZ74674.1\|1331514_1332249_+	transcriptional regulator	B5TK58	Pseudomonas_phage	3.0e-129	92.6
AZZ74675.1\|1332763_1333180_+\|tail	tail assembly chaperone	NA	NA	NA	NA
AZZ74676.1\|1333266_1333728_+\|tail	phage tail protein	NA	NA	NA	NA
AZZ74677.1\|1333871_1334219_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	2.7e-51	86.8
AZZ74678.1\|1334243_1334435_+	hypothetical protein	NA	NA	NA	NA
AZZ74679.1\|1334526_1335018_+\|tail	phage tail protein	H2BDC0	Pseudomonas_virus	1.3e-51	63.4
AZZ74680.1\|1335026_1335377_+	hypothetical protein	NA	NA	NA	NA
AZZ79252.1\|1335406_1335661_+	hypothetical protein	Q9MCA3	Pseudomonas_phage	3.8e-15	50.6
AZZ74681.1\|1335717_1336944_+\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	5.7e-32	31.9
AZZ74682.1\|1336981_1337320_+\|tail	phage tail protein	K7PHJ6	Enterobacteria_phage	7.8e-32	57.1
AZZ74683.1\|1337386_1338070_+\|tail	phage minor tail protein L	A0A2I6PIA7	Pseudomonas_phage	1.9e-85	66.1
AZZ74684.1\|1338072_1338876_+	hydrolase Nlp/P60	A0A2I6PI52	Pseudomonas_phage	1.8e-87	56.0
AZZ74685.1\|1338903_1339509_+\|tail	phage tail protein	A0A2I6PI69	Pseudomonas_phage	5.9e-54	57.1
AZZ74686.1\|1339539_1340145_+\|tail	phage tail protein	K7PHE5	Enterobacteria_phage	1.5e-46	50.5
AZZ74687.1\|1340213_1343786_+	host specificity protein J	A4JX16	Burkholderia_virus	1.2e-284	45.3
AZZ74688.1\|1343782_1344175_+	hypothetical protein	NA	NA	NA	NA
AZZ74689.1\|1344174_1344900_+	hypothetical protein	NA	NA	NA	NA
AZZ74690.1\|1346045_1346363_+	hypothetical protein	A0A059VFX9	Pseudomonas_phage	1.6e-26	56.6
AZZ74691.1\|1346359_1346713_+\|tail	phage tail protein	A0A059VFX9	Pseudomonas_phage	1.5e-22	59.4
AZZ74692.1\|1346804_1347773_+	hypothetical protein	A0A1S5R1J5	Pseudomonas_phage	1.4e-04	67.6
AZZ74693.1\|1347869_1348454_+	hypothetical protein	B5TK65	Pseudomonas_phage	5.2e-84	77.3
AZZ74694.1\|1348450_1348630_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	5.2e-19	80.0
AZZ74695.1\|1348629_1350126_+\|tail	phage tail protein	B5TK67	Pseudomonas_phage	4.7e-262	92.2
AZZ74696.1\|1350193_1350541_+\|tail	phage tail protein	B5TK68	Pseudomonas_phage	3.8e-58	93.9
AZZ74697.1\|1350537_1350834_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	1.1e-40	90.8
AZZ74698.1\|1350964_1352950_+	hypothetical protein	B5TK70	Pseudomonas_phage	9.3e-24	70.0
AZZ74699.1\|1352936_1354172_+	hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	1.1e-147	65.5
AZZ74700.1\|1354175_1355219_+\|plate	baseplate protein	B5TK72	Pseudomonas_phage	1.0e-154	78.8
AZZ74701.1\|1355360_1355870_+	hypothetical protein	B5TK73	Pseudomonas_phage	3.2e-77	84.6
AZZ74702.1\|1355866_1356265_+	hypothetical protein	B5TK74	Pseudomonas_phage	4.7e-68	93.9
AZZ74703.1\|1356254_1357298_+\|plate	baseplate J protein	B5TK75	Pseudomonas_phage	3.4e-158	82.9
AZZ74704.1\|1357285_1357885_+\|tail	phage tail protein	B5TK76	Pseudomonas_phage	5.0e-106	91.5
AZZ74705.1\|1357899_1358631_+	hypothetical protein	B5TK77	Pseudomonas_phage	2.7e-21	50.0
AZZ74706.1\|1358632_1359058_+\|tail	phage tail protein	NA	NA	NA	NA
AZZ74707.1\|1359115_1360210_+\|tail	phage tail protein	B5TK79	Pseudomonas_phage	1.0e-160	74.7
AZZ74708.1\|1360218_1360785_+\|tail	phage tail protein	B5TK80	Pseudomonas_phage	4.5e-72	67.6
AZZ74709.1\|1360807_1361734_+	hypothetical protein	B5TK77	Pseudomonas_phage	9.1e-22	75.8
AZZ74710.1\|1361733_1362201_+	hypothetical protein	B5TK82	Pseudomonas_phage	2.3e-13	45.6
AZZ74711.1\|1362241_1363162_+\|tail	phage tail protein	B5TK81	Pseudomonas_phage	3.4e-37	39.8
AZZ74712.1\|1363164_1363605_+	hypothetical protein	Q9ZXK5	Pseudomonas_virus	4.4e-19	47.4
AZZ74713.1\|1363614_1364775_+	hypothetical protein	B5TK77	Pseudomonas_phage	4.8e-20	48.7
AZZ74714.1\|1364774_1365029_+	hypothetical protein	NA	NA	NA	NA
AZZ74715.1\|1365066_1365633_+	lysozyme	B5TK83	Pseudomonas_phage	4.9e-87	83.7
AZZ74716.1\|1365611_1366130_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	2.2e-57	72.4
AZZ74717.1\|1366197_1366698_+	damage-inducible protein CinA	B5TK85	Pseudomonas_phage	2.9e-75	89.2
AZZ74718.1\|1366781_1367837_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.3e-109	57.9
AZZ74719.1\|1367845_1368316_+	recombination regulator RecX	NA	NA	NA	NA
AZZ74720.1\|1368371_1369490_-	Rossman fold protein, TIGR00730 family	NA	NA	NA	NA
AZZ74721.1\|1369841_1370036_+	hypothetical protein	NA	NA	NA	NA
AZZ74722.1\|1370036_1370462_-	hypothetical protein	NA	NA	NA	NA
AZZ74723.1\|1370651_1371398_+	DTW domain-containing protein	NA	NA	NA	NA
AZZ74724.1\|1371621_1372272_+	DNA-binding response regulator	NA	NA	NA	NA
AZZ74725.1\|1372346_1372709_+	diacylglycerol kinase	NA	NA	NA	NA
AZZ74726.1\|1372705_1373632_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZZ74727.1\|1373765_1374545_+	ferredoxin--NADP reductase	NA	NA	NA	NA
AZZ74728.1\|1374655_1375363_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AZZ74729.1\|1375521_1376292_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZZ74730.1\|1376421_1376892_-	hypothetical protein	Q9EYF4	Enterobacteria_phage	1.3e-37	51.3
AZZ74731.1\|1376964_1377675_-	RNA-binding protein	NA	NA	NA	NA
AZZ74732.1\|1377866_1378340_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZZ74733.1\|1378892_1380230_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AZZ74734.1\|1380519_1382421_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	8.2e-78	34.6
AZZ74735.1\|1382583_1382895_-	hypothetical protein	NA	NA	NA	NA
AZZ74736.1\|1383644_1384940_-	virulence factor family protein	NA	NA	NA	NA
AZZ74737.1\|1384939_1387579_-	hypothetical protein	NA	NA	NA	NA
AZZ74738.1\|1388515_1389577_+	DNA polymerase IV	NA	NA	NA	NA
AZZ74739.1\|1389685_1390639_-	hypothetical protein	NA	NA	NA	NA
AZZ74740.1\|1390656_1392372_-\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	6.9e-07	25.4

DBSCAN-SWA_2

1924756 : 2006700

uncultured_Caudovirales_phage(38.89%)

integrase,lysis,capsid,tail,protease,terminase,holin,portal,head,plate

attL 1971503:1971522|attR 2012170:2012189

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ75212.1\|1924756_1926874_-\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	1.1e-104	34.4
AZZ75213.1\|1926979_1927942_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZZ75214.1\|1928083_1928737_-	HAD family hydrolase	NA	NA	NA	NA
AZZ75215.1\|1928771_1929761_-	spermidine/putrescine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-33	36.5
AZZ75216.1\|1929757_1930558_-	ABC transporter permease	NA	NA	NA	NA
AZZ75217.1\|1930544_1931390_-	ABC transporter permease	NA	NA	NA	NA
AZZ75218.1\|1931386_1932193_-	nucleotide pyrophosphatase	NA	NA	NA	NA
AZZ75219.1\|1932374_1933442_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZZ75220.1\|1933792_1934506_+	MFS transporter	NA	NA	NA	NA
AZZ75221.1\|1935038_1936373_-	N-acyl-L-amino acid amidohydrolase	NA	NA	NA	NA
AZZ75222.1\|1936437_1938591_-	mechanosensitive ion channel protein	NA	NA	NA	NA
AZZ75223.1\|1939034_1940324_-	M18 family aminopeptidase	NA	NA	NA	NA
AZZ75224.1\|1940503_1941139_-	RNA pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	7.4e-07	30.1
AZZ75225.1\|1941230_1941485_-	cell division topological specificity factor MinE	NA	NA	NA	NA
AZZ75226.1\|1941484_1942297_-	septum site-determining protein MinD	NA	NA	NA	NA
AZZ75227.1\|1942466_1943204_-	septum site-determining protein MinC	NA	NA	NA	NA
AZZ75228.1\|1943321_1944254_+	lipid A biosynthesis lauroyl acyltransferase	A0A1W6JP29	Morganella_phage	6.9e-46	35.5
AZZ75229.1\|1944289_1945462_+	Patatin	NA	NA	NA	NA
AZZ75230.1\|1945552_1946338_-	hypothetical protein	NA	NA	NA	NA
AZZ75231.1\|1946711_1947497_-	hypothetical protein	NA	NA	NA	NA
AZZ75232.1\|1947659_1949018_-	purine permease	Q9KX94	Enterobacteria_phage	3.5e-30	29.7
AZZ75233.1\|1949184_1950492_-	hypothetical protein	NA	NA	NA	NA
AZZ75234.1\|1950543_1951047_-	ureidoglycolate lyase	NA	NA	NA	NA
AZZ75235.1\|1951188_1952184_-	allantoicase	NA	NA	NA	NA
AZZ75236.1\|1952272_1952788_-	OHCU decarboxylase	NA	NA	NA	NA
AZZ75237.1\|1952784_1953711_-	allantoinase	NA	NA	NA	NA
AZZ75238.1\|1954131_1954485_+	5-hydroxyisourate hydrolase	NA	NA	NA	NA
AZZ79263.1\|1954668_1956567_-	hypothetical protein	NA	NA	NA	NA
AZZ75239.1\|1956622_1958476_-	hypothetical protein	NA	NA	NA	NA
AZZ75240.1\|1958571_1960287_-	hypothetical protein	NA	NA	NA	NA
AZZ75241.1\|1960521_1962192_-	hypothetical protein	NA	NA	NA	NA
AZZ75242.1\|1962563_1965416_-	hypothetical protein	NA	NA	NA	NA
AZZ75243.1\|1966309_1966939_-	lysine transporter LysE	NA	NA	NA	NA
AZZ75244.1\|1967026_1968376_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	2.5e-65	35.8
AZZ75245.1\|1968667_1969114_-	MarR family transcriptional regulator	NA	NA	NA	NA
AZZ75246.1\|1969196_1970363_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZZ75247.1\|1970507_1970879_-	glutaredoxin	NA	NA	NA	NA
AZZ75248.1\|1970982_1971543_-	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	3.3e-59	64.4
1971503:1971522	attL	NA	NA	NA	NA
AZZ75249.1\|1971550_1972759_-\|integrase	site-specific integrase	J7HXC4	Pseudomonas_phage	1.3e-129	58.4
AZZ75250.1\|1973611_1974043_-	hypothetical protein	NA	NA	NA	NA
AZZ75251.1\|1974103_1974421_-	transcriptional regulator	NA	NA	NA	NA
AZZ75252.1\|1974413_1974593_-	hypothetical protein	NA	NA	NA	NA
AZZ75253.1\|1974579_1974864_-	DNA-binding protein	NA	NA	NA	NA
AZZ75254.1\|1974874_1975465_-	hypothetical protein	NA	NA	NA	NA
AZZ75255.1\|1975808_1976831_+	hypothetical protein	NA	NA	NA	NA
AZZ75256.1\|1976851_1977583_-	peptidase S24	A5VW98	Enterobacteria_phage	6.5e-31	38.0
AZZ75257.1\|1977662_1977923_+	hypothetical protein	A0A2H4J0V8	uncultured_Caudovirales_phage	2.9e-10	49.3
AZZ75258.1\|1978212_1978773_+	hypothetical protein	NA	NA	NA	NA
AZZ75259.1\|1978765_1978996_+	conjugal transfer protein TraR	A2I309	Vibrio_virus	1.3e-06	39.5
AZZ75260.1\|1978985_1981202_+	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	1.1e-187	46.4
AZZ75261.1\|1981194_1981554_+	hypothetical protein	NA	NA	NA	NA
AZZ75262.1\|1982068_1982446_-	hypothetical protein	NA	NA	NA	NA
AZZ75263.1\|1982519_1982858_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	6.8e-44	82.7
AZZ75264.1\|1982989_1983514_+	DNA packaging protein	A0A2D1GMW4	Marinobacter_phage	8.7e-22	40.5
AZZ75265.1\|1983557_1985447_+\|terminase	terminase	A0A2D1GMT1	Marinobacter_phage	4.5e-169	49.1
AZZ75266.1\|1985457_1985673_+	hypothetical protein	NA	NA	NA	NA
AZZ75267.1\|1985675_1987286_+\|portal	phage portal protein	A0A067ZJA4	Vibrio_phage	1.1e-96	42.4
AZZ75268.1\|1987288_1988521_+	hypothetical protein	A0A219Y8X7	Aeromonas_phage	6.4e-47	37.8
AZZ75269.1\|1988533_1988884_+\|head	head decoration protein	NA	NA	NA	NA
AZZ75270.1\|1988897_1989926_+\|capsid	capsid protein	A0A0C5ABI0	Bacteriophage	2.1e-72	43.6
AZZ75271.1\|1989927_1990146_+	hypothetical protein	NA	NA	NA	NA
AZZ75272.1\|1990145_1990460_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	1.0e-25	51.9
AZZ75273.1\|1990456_1991113_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	2.1e-81	68.2
AZZ75274.1\|1991117_1991636_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-56	61.7
AZZ75275.1\|1991632_1992199_+\|plate	phage baseplate protein	A0A2H4JG06	uncultured_Caudovirales_phage	6.3e-58	60.1
AZZ79264.1\|1992281_1992500_+	hypothetical protein	NA	NA	NA	NA
AZZ75276.1\|1992505_1992832_+\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.2e-34	64.8
AZZ75277.1\|1992828_1993710_+\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	1.1e-106	68.6
AZZ75278.1\|1993711_1994320_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	2.4e-79	70.7
AZZ75279.1\|1994312_1996283_+\|tail	phage tail protein	A4PE45	Ralstonia_virus	7.5e-66	51.7
AZZ75280.1\|1996285_1996714_+\|tail	phage tail protein	A0A291LAV4	Bordetella_phage	6.2e-26	46.0
AZZ75281.1\|1996818_1997985_+\|tail	phage tail protein	A0A2H4J869	uncultured_Caudovirales_phage	5.1e-171	77.7
AZZ75282.1\|1997998_1998502_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	5.2e-64	71.9
AZZ75283.1\|1998515_1999115_+	hypothetical protein	A0A2H4J873	uncultured_Caudovirales_phage	1.0e-18	53.2
AZZ75284.1\|2001915_2002761_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.8e-110	70.4
AZZ75285.1\|2002735_2002942_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	7.6e-22	70.1
AZZ75286.1\|2003041_2004091_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.8e-149	75.4
AZZ75287.1\|2004140_2004704_+	lysozyme	B5TK83	Pseudomonas_phage	2.0e-80	77.6
AZZ75288.1\|2004685_2005249_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	4.8e-50	63.8
AZZ75289.1\|2005297_2005732_-	hypothetical protein	NA	NA	NA	NA
AZZ75290.1\|2005905_2006700_+	restriction endonuclease subunit M	C7BGE1	Burkholderia_phage	2.4e-100	66.8
2012170:2012189	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2567431 : 2577661

uncultured_Caudovirales_phage(57.14%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ75751.1\|2567431_2569093_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.1e-54	31.2
AZZ75752.1\|2569226_2570132_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZZ75753.1\|2570206_2570677_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZZ75754.1\|2570730_2571078_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	3.9e-34	61.1
AZZ75755.1\|2571101_2572385_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.6e-170	73.2
AZZ75756.1\|2572413_2572884_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.4e-55	66.0
AZZ75757.1\|2572893_2573589_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.9e-101	78.1
AZZ75758.1\|2573744_2574818_+	alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.3e-11	25.5
AZZ75759.1\|2574867_2575431_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZZ75760.1\|2575586_2577002_-	two-component sensor histidine kinase	NA	NA	NA	NA
AZZ75761.1\|2576998_2577661_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	4.8e-33	38.6

DBSCAN-SWA_4

3636822 : 3700750

uncultured_Caudovirales_phage(55.56%)

integrase,lysis,capsid,tail,protease,terminase,holin,transposase,portal,head,plate

attL 3648048:3648107|attR 3693405:3693512

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ76598.1\|3636822_3637434_-\|transposase	transposase	NA	NA	NA	NA
AZZ76599.1\|3637707_3638991_-	alanine racemase	NA	NA	NA	NA
AZZ76600.1\|3638990_3640385_-	FAD-linked oxidoreductase	NA	NA	NA	NA
AZZ76601.1\|3640395_3640752_-	cytochrome c5 family protein	NA	NA	NA	NA
AZZ76602.1\|3641117_3642743_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AZZ76603.1\|3642873_3643224_+	DUF3302 domain-containing protein	NA	NA	NA	NA
AZZ76604.1\|3643229_3644189_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AZZ79317.1\|3644274_3645291_+	hypothetical protein	NA	NA	NA	NA
AZZ76605.1\|3645294_3646188_-	EamA family transporter	NA	NA	NA	NA
AZZ76606.1\|3646326_3646764_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZZ76607.1\|3646821_3647139_+	YceK/YidQ family lipoprotein	NA	NA	NA	NA
AZZ76608.1\|3647225_3647897_-	BAX inhibitor protein	A0A2H4JFM9	uncultured_Caudovirales_phage	8.9e-112	97.3
3648048:3648107	attL	NA	NA	NA	NA
AZZ76609.1\|3648316_3648526_+	hypothetical protein	A0A1B0VP78	Pseudomonas_phage	2.8e-11	56.9
AZZ76610.1\|3648784_3649330_+	DUF4145 domain-containing protein	Q20DE2	Lactobacillus_phage	3.8e-36	41.8
AZZ76611.1\|3649652_3649883_-	hypothetical protein	NA	NA	NA	NA
AZZ76612.1\|3650408_3651146_-	hypothetical protein	NA	NA	NA	NA
AZZ79318.1\|3651458_3651962_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	6.0e-52	69.5
AZZ76613.1\|3651961_3652495_-	chitinase	A0A059VA40	Pseudomonas_phage	1.1e-69	75.1
AZZ76614.1\|3652544_3653594_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.6e-147	74.6
AZZ76615.1\|3653692_3653899_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	8.4e-21	67.2
AZZ76616.1\|3653873_3654719_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.4e-109	69.6
AZZ76617.1\|3654728_3657347_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	7.1e-104	43.5
AZZ76618.1\|3657497_3658097_-	hypothetical protein	A0A2H4J873	uncultured_Caudovirales_phage	1.0e-18	53.2
AZZ76619.1\|3658110_3658614_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	5.2e-64	71.9
AZZ76620.1\|3658627_3659794_-\|tail	phage tail protein	A0A2H4J869	uncultured_Caudovirales_phage	8.1e-169	77.7
AZZ79319.1\|3659897_3660323_-\|tail	phage tail protein	A0A291LAV4	Bordetella_phage	3.4e-24	41.9
AZZ76621.1\|3660328_3662326_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	2.6e-66	51.7
AZZ76622.1\|3662318_3662927_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	1.2e-78	70.7
AZZ76623.1\|3662928_3663810_-\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	7.4e-106	67.6
AZZ76624.1\|3663806_3664133_-\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-33	63.9
AZZ79320.1\|3664138_3664372_-	hypothetical protein	NA	NA	NA	NA
AZZ76625.1\|3664442_3665027_-\|plate	phage baseplate protein	A0A2H4JG06	uncultured_Caudovirales_phage	2.6e-59	75.0
AZZ76626.1\|3665023_3665536_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.7e-62	66.9
AZZ76627.1\|3665528_3666194_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	1.1e-74	66.7
AZZ76628.1\|3666190_3666511_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	2.4e-38	67.6
AZZ76629.1\|3666513_3667509_-\|capsid	major capsid protein E	A0A2H4J890	uncultured_Caudovirales_phage	2.1e-165	87.0
AZZ76630.1\|3667571_3667916_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	3.7e-45	83.3
AZZ76631.1\|3667912_3669067_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	1.7e-142	71.7
AZZ76632.1\|3669063_3670545_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	4.7e-246	84.8
AZZ76633.1\|3670544_3670751_-	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	2.4e-23	80.9
AZZ76634.1\|3670752_3672747_-\|terminase	terminase	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	80.7
AZZ76635.1\|3672751_3673321_-\|terminase	terminase small subunit	A0A2H4JG15	uncultured_Caudovirales_phage	1.2e-48	53.4
AZZ76636.1\|3673694_3674039_-\|holin	holin	B5TK61	Pseudomonas_phage	1.3e-10	41.7
AZZ79321.1\|3674289_3676077_-	hypothetical protein	NA	NA	NA	NA
AZZ76637.1\|3676197_3676602_-	antitermination protein Q	A0A1W6JTD2	Pseudomonas_phage	1.7e-28	51.8
AZZ76638.1\|3676609_3676930_-	hypothetical protein	A0A2D1GNG3	Pseudomonas_phage	7.2e-19	46.2
AZZ76639.1\|3676907_3678215_-\|integrase	integrase	A0A2D1GND4	Pseudomonas_phage	8.9e-124	53.3
AZZ76640.1\|3678211_3678514_-	hypothetical protein	A0A2K8HR56	Pseudomonas_phage	1.8e-19	46.2
AZZ76641.1\|3678504_3678714_-	hypothetical protein	NA	NA	NA	NA
AZZ76642.1\|3678706_3679378_-	replication P family protein	A0A1B0YZY6	Pseudomonas_phage	3.6e-44	47.0
AZZ76643.1\|3679374_3680151_-	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	2.2e-37	55.8
AZZ76644.1\|3680352_3680775_-	Rha family transcriptional regulator	A0A2D1GNM7	Pseudomonas_phage	3.6e-42	61.4
AZZ76645.1\|3680841_3681054_-	Rha family transcriptional regulator	H2BD64	Pseudomonas_phage	9.0e-18	70.8
AZZ76646.1\|3681140_3681797_+	XRE family transcriptional regulator	K7P850	Enterobacteria_phage	5.6e-42	46.7
AZZ76647.1\|3681943_3682195_+	hypothetical protein	NA	NA	NA	NA
AZZ76648.1\|3682772_3683006_-	hypothetical protein	NA	NA	NA	NA
AZZ76649.1\|3683172_3683406_+	hypothetical protein	NA	NA	NA	NA
AZZ76650.1\|3683410_3683983_-	DUF2441 domain-containing protein	NA	NA	NA	NA
AZZ76651.1\|3684190_3684460_+	hypothetical protein	NA	NA	NA	NA
AZZ76652.1\|3685051_3685405_-	hypothetical protein	NA	NA	NA	NA
AZZ76653.1\|3685749_3686130_+	hypothetical protein	NA	NA	NA	NA
AZZ76654.1\|3686098_3686410_-	hypothetical protein	NA	NA	NA	NA
AZZ76655.1\|3686623_3687490_-	hypothetical protein	NA	NA	NA	NA
AZZ76656.1\|3687593_3688370_+	hypothetical protein	A0A2H4JCP9	uncultured_Caudovirales_phage	1.1e-12	30.1
AZZ76657.1\|3688403_3689249_-	hypothetical protein	NA	NA	NA	NA
AZZ76658.1\|3689277_3689952_+	hypothetical protein	A0A2I7R6M5	Vibrio_phage	2.4e-11	29.0
AZZ76659.1\|3689958_3690204_-	hypothetical protein	NA	NA	NA	NA
AZZ76660.1\|3690317_3690629_-	hypothetical protein	NA	NA	NA	NA
AZZ79322.1\|3691129_3691399_+	hypothetical protein	A0A1B0VM42	Pseudomonas_phage	7.6e-38	71.9
AZZ76661.1\|3691448_3691643_+	hypothetical protein	NA	NA	NA	NA
AZZ76662.1\|3691693_3691942_+	hypothetical protein	NA	NA	NA	NA
AZZ76663.1\|3691986_3692229_+	hypothetical protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.9e-11	44.3
AZZ76664.1\|3692230_3693280_+\|integrase	integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	5.7e-105	57.5
AZZ76665.1\|3694520_3695732_+	MFS transporter	NA	NA	NA	NA
3693405:3693512	attR	NA	NA	NA	NA
AZZ76666.1\|3695706_3695916_+	hypothetical protein	NA	NA	NA	NA
AZZ76667.1\|3695925_3696339_-	cupin	NA	NA	NA	NA
AZZ76668.1\|3696462_3697380_-	transcriptional regulator	Q6JIH3	Burkholderia_virus	4.0e-22	27.3
AZZ76669.1\|3697472_3698084_+	glutathione transferase GstA	NA	NA	NA	NA
AZZ76670.1\|3698168_3698549_+	reactive intermediate/imine deaminase	NA	NA	NA	NA
AZZ76671.1\|3698761_3700750_+\|protease	collagenase-like protease	Q6DW11	Phage_TP	1.8e-22	27.8

DBSCAN-SWA_5

4189837 : 4196096

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ79352.1\|4189837_4190230_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.3e-51	76.0
AZZ77074.1\|4190231_4190588_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	5.9e-38	65.8
AZZ77075.1\|4190587_4190881_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	4.4e-31	66.7
AZZ77076.1\|4190877_4191213_+	sulfurtransferase TusE	A0A2H4J8B6	uncultured_Caudovirales_phage	8.8e-44	76.6
AZZ77077.1\|4191209_4192211_+	hypothetical protein	A0A2H4JBY5	uncultured_Caudovirales_phage	4.8e-162	84.1
AZZ77078.1\|4192302_4193304_+	glutathione-dependent reductase	NA	NA	NA	NA
AZZ77079.1\|4193420_4194815_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AZZ77080.1\|4194815_4196096_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.3e-98	53.9

DBSCAN-SWA_6

4305894 : 4339742

Lausannevirus(16.67%)

protease,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ77174.1\|4305894_4306395_-\|coat	spore coat protein	NA	NA	NA	NA
AZZ77175.1\|4306399_4306936_-\|coat	spore coat protein	NA	NA	NA	NA
AZZ77176.1\|4306956_4307490_-\|coat	spore coat protein	NA	NA	NA	NA
AZZ79355.1\|4307592_4308096_-\|coat	spore coat protein	NA	NA	NA	NA
AZZ77177.1\|4308400_4309531_+	cell division protein ZapE	NA	NA	NA	NA
AZZ77178.1\|4309746_4311060_+	protein kinase	F2WL08	Lausannevirus	5.1e-10	25.8
AZZ77179.1\|4311172_4311877_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZZ77180.1\|4312098_4313496_+	type IV secretion protein Rhs	NA	NA	NA	NA
AZZ77181.1\|4313534_4314926_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZZ77182.1\|4314998_4316324_-	MFS transporter	NA	NA	NA	NA
AZZ77183.1\|4316605_4317478_+	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	2.5e-05	36.5
AZZ77184.1\|4317574_4318435_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZZ77185.1\|4318547_4319657_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
AZZ77186.1\|4319799_4320627_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
AZZ77187.1\|4321665_4322214_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.8e-17	41.5
AZZ77188.1\|4322217_4323144_-	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
AZZ77189.1\|4323288_4325328_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
AZZ79356.1\|4325537_4326668_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
AZZ77190.1\|4326671_4327712_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZZ77191.1\|4328044_4328986_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZZ77192.1\|4329297_4330152_-	hypothetical protein	NA	NA	NA	NA
AZZ77193.1\|4330244_4331144_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZZ77194.1\|4331262_4332468_+	MFS transporter	NA	NA	NA	NA
AZZ77195.1\|4332474_4332717_+	hypothetical protein	NA	NA	NA	NA
AZZ77196.1\|4333377_4335249_-	peptidylprolyl isomerase	NA	NA	NA	NA
AZZ77197.1\|4335477_4335750_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	1.2e-19	58.4
AZZ77198.1\|4335898_4338295_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.1e-220	51.9
AZZ77199.1\|4338458_4339742_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.8e-138	59.6

DBSCAN-SWA_7

6114128 : 6168076

Tupanvirus(16.67%)

protease,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZZ78723.1\|6114128_6114632_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
AZZ78724.1\|6114668_6114872_-	hypothetical protein	NA	NA	NA	NA
AZZ78725.1\|6114903_6115791_+	acyltransferase	NA	NA	NA	NA
AZZ78726.1\|6115792_6116350_-	hypothetical protein	NA	NA	NA	NA
AZZ78727.1\|6116500_6117136_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA
AZZ78728.1\|6117132_6117807_+	anti-sigma factor	NA	NA	NA	NA
AZZ78729.1\|6118061_6119261_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.9e-11	28.9
AZZ78730.1\|6119465_6120323_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZZ78731.1\|6120539_6121172_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
AZZ78732.1\|6121316_6124334_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
AZZ78733.1\|6124330_6124660_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA
AZZ78734.1\|6124674_6125925_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
AZZ78735.1\|6125945_6127199_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	4.1e-102	53.4
AZZ78736.1\|6127472_6128183_-	conjugal transfer protein TraX	NA	NA	NA	NA
AZZ78737.1\|6128309_6129350_+	low specificity L-threonine aldolase	NA	NA	NA	NA
AZZ78738.1\|6129655_6130189_+\|transposase	transposase	NA	NA	NA	NA
AZZ78739.1\|6130370_6131195_+	short chain dehydrogenase	NA	NA	NA	NA
AZZ78740.1\|6131535_6132636_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZZ78741.1\|6132933_6134229_+	Rieske (2Fe-2S) protein	NA	NA	NA	NA
AZZ78742.1\|6134980_6135547_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZZ78743.1\|6135600_6136371_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
AZZ78744.1\|6136380_6137601_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AZZ78745.1\|6137600_6139550_-	(Fe-S)-binding protein	NA	NA	NA	NA
AZZ78746.1\|6139703_6141764_-	N-methylproline demethylase	NA	NA	NA	NA
AZZ78747.1\|6141779_6142310_-	hydrocarbon binding protein	NA	NA	NA	NA
AZZ78748.1\|6142416_6143394_-	membrane dipeptidase	NA	NA	NA	NA
AZZ79409.1\|6143628_6144030_+	hypothetical protein	NA	NA	NA	NA
AZZ78749.1\|6144131_6144455_+	transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	9.1e-30	64.8
AZZ78750.1\|6144484_6144901_+	hypothetical protein	NA	NA	NA	NA
AZZ78751.1\|6144995_6145940_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZZ78752.1\|6146147_6147092_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZZ78753.1\|6147201_6148089_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
AZZ78754.1\|6148229_6149195_+	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AZZ78755.1\|6149420_6149897_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
AZZ78756.1\|6149921_6151085_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
AZZ79410.1\|6151470_6151734_+	hypothetical protein	NA	NA	NA	NA
AZZ78757.1\|6151859_6152963_-	GlxA family transcriptional regulator	NA	NA	NA	NA
AZZ78758.1\|6153504_6154881_-	L-serine ammonia-lyase	NA	NA	NA	NA
AZZ78759.1\|6155318_6156266_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZZ78760.1\|6156332_6157178_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AZZ78761.1\|6157174_6158353_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-24	36.6
AZZ78762.1\|6158601_6160599_-	beta-aspartyl-peptidase	A0A2I7QNT1	Vibrio_phage	1.1e-19	27.7
AZZ78763.1\|6161028_6161622_+	transcriptional regulator BetI	NA	NA	NA	NA
AZZ78764.1\|6161710_6163183_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AZZ78765.1\|6163336_6165040_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	2.9e-50	30.1
AZZ78766.1\|6165296_6166739_+	peptidase C69	NA	NA	NA	NA
AZZ78767.1\|6166738_6168076_+\|protease	Zn-dependent protease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP022411

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection