CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP025382	Bordetella pertussis strain H877 chromosome, complete genome	5 crisprs	DEDDh,csa3,cas3,DinG	0	0	29	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP025382_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025382_1

251651-251735

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025382_1

>merge|CP025382|1|251651-251735|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP025382|1|1|251651-251735|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP025382.1\|AZY06662.1\|251745_252687_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP025382.1\|AZY06664.1\|254659_255298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP025382.1\|AZY06660.1\|249636_250338_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP025382.1\|AZY06654.1\|241395_242439_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP025382.1\|AZY06659.1\|248941_249640_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP025382.1\|AZY06669.1\|261016_261916_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP025382.1\|AZY06655.1\|242609_244712_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP025382.1\|AZY06670.1\|262022_263777_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP025382.1\|AZY06668.1\|259968_260952_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP025382.1\|AZY06667.1\|258852_259833_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP025382.1\|AZY06652.1\|239176_239587_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP025382.1\|AZY06665.1\|256756_257293_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP025382.1\|AZY06663.1\|252683_254573_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP025382.1\|AZY06657.1\|247097_247589_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP025382.1\|AZY09859.1\|255440_256685_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP025382.1\|AZY06656.1\|246122_247079_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025382.1\|AZY06658.1\|247585_248941_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997
CP025382.1\|AZY06661.1\|250590_251640_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP025382.1\|AZY06653.1\|240608_241352_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP025382.1\|AZY06666.1\|257444_258836_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779

Protein	Function_ID	Function_description	E-value
CP025382.1\|AZY06662.1\|251745_252687_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP025382.1\|AZY06664.1\|254659_255298_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP025382.1\|AZY06660.1\|249636_250338_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP025382.1\|AZY06654.1\|241395_242439_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP025382.1\|AZY06659.1\|248941_249640_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP025382.1\|AZY06669.1\|261016_261916_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP025382.1\|AZY06655.1\|242609_244712_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP025382.1\|AZY06670.1\|262022_263777_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP025382.1\|AZY06668.1\|259968_260952_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP025382.1\|AZY06667.1\|258852_259833_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP025382.1\|AZY06652.1\|239176_239587_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP025382.1\|AZY06665.1\|256756_257293_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP025382.1\|AZY06663.1\|252683_254573_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP025382.1\|AZY06657.1\|247097_247589_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP025382.1\|AZY09859.1\|255440_256685_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
CP025382.1\|AZY06656.1\|246122_247079_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	3.59787e-117
CP025382.1\|AZY06658.1\|247585_248941_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147
CP025382.1\|AZY06661.1\|250590_251640_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP025382.1\|AZY06653.1\|240608_241352_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP025382.1\|AZY06666.1\|257444_258836_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0

>CP025382.1|AZY06661.1|250590_251640_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP025382.1|AZY06660.1|249636_250338_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP025382.1|AZY06659.1|248941_249640_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP025382.1|AZY06658.1|247585_248941_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP025382.1|AZY06657.1|247097_247589_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP025382.1|AZY06656.1|246122_247079_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAVADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP025382.1|AZY06655.1|242609_244712_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP025382.1|AZY06654.1|241395_242439_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP025382.1|AZY06653.1|240608_241352_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP025382.1|AZY06652.1|239176_239587_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP025382.1|AZY06662.1|251745_252687_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP025382.1|AZY06663.1|252683_254573_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP025382.1|AZY06664.1|254659_255298_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP025382.1|AZY09859.1|255440_256685_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP025382.1|AZY06665.1|256756_257293_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP025382.1|AZY06666.1|257444_258836_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP025382.1|AZY06667.1|258852_259833_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP025382.1|AZY06668.1|259968_260952_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP025382.1|AZY06669.1|261016_261916_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP025382.1|AZY06670.1|262022_263777_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP025382_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025382_2

625059-625168

Orphan

Consensus_repeat	Method
GGGGACAGATACCGTCTTGGCCGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025382_2

>merge|CP025382|2|625059-625168|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAAGCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGCGGGGACAGATACCGTCTTGGCAGTCAA

>CP025382|2|2|625059-625168|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAA	GCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGC
GGGGACAGATACCGTCTTGGCAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP025382.1\|AZY06960.1\|615784_617125_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP025382.1\|AZY06957.1\|611987_612803_-\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447
CP025382.1\|AZY06961.1\|618194_619619_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236531
CP025382.1\|AZY06964.1\|622843_623842_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025382.1\|AZY06963.1\|621824_622775_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY06972.1\|630818_631769_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY06970.1\|629541_630312_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP025382.1\|AZY06975.1\|638499_638868_+\|hypothetical-protein	unknown	unknown	unknown
CP025382.1\|AZY06962.1\|619618_620320_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP025382.1\|AZY06968.1\|627300_628710_-\|lytic-transglycosylase	unknown	unknown	gnl\|CDD\|182727
CP025382.1\|AZY06971.1\|630354_630822_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP025382.1\|AZY06974.1\|635522_638501_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP025382.1\|AZY06965.1\|623846_624527_-\|DUF533-domain-containing-protein	unknown	unknown	gnl\|CDD\|377342
CP025382.1\|AZY06967.1\|626420_627206_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP025382.1\|AZY06976.1\|638854_639805_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY06969.1\|628720_629521_-\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP025382.1\|AZY06959.1\|613905_615669_-\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP025382.1\|AZY06966.1\|624664_625057_+\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP025382.1\|AZY06958.1\|612915_613794_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP025382.1\|AZY06973.1\|633717_634596_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126

Protein	Function_ID	Function_description	E-value
CP025382.1\|AZY06960.1\|615784_617125_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP025382.1\|AZY06957.1\|611987_612803_-\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163
CP025382.1\|AZY06961.1\|618194_619619_-\|ATP-binding-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP025382.1\|AZY06964.1\|622843_623842_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP025382.1\|AZY06963.1\|621824_622775_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.3142e-23
CP025382.1\|AZY06972.1\|630818_631769_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP025382.1\|AZY06970.1\|629541_630312_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP025382.1\|AZY06962.1\|619618_620320_-\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP025382.1\|AZY06968.1\|627300_628710_-\|lytic-transglycosylase	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP025382.1\|AZY06971.1\|630354_630822_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP025382.1\|AZY06974.1\|635522_638501_-\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP025382.1\|AZY06965.1\|623846_624527_-\|DUF533-domain-containing-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP025382.1\|AZY06967.1\|626420_627206_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP025382.1\|AZY06976.1\|638854_639805_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.27808e-22
CP025382.1\|AZY06969.1\|628720_629521_-\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP025382.1\|AZY06959.1\|613905_615669_-\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP025382.1\|AZY06966.1\|624664_625057_+\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP025382.1\|AZY06958.1\|612915_613794_-\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP025382.1\|AZY06973.1\|633717_634596_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12

>CP025382.1|AZY06966.1|624664_625057_+|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP025382.1|AZY06965.1|623846_624527_-|DUF533-domain-containing-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP025382.1|AZY06964.1|622843_623842_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP025382.1|AZY06963.1|621824_622775_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWQRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025382.1|AZY06962.1|619618_620320_-|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP025382.1|AZY06961.1|618194_619619_-|ATP-binding-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP025382.1|AZY06960.1|615784_617125_+|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP025382.1|AZY06959.1|613905_615669_-|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP025382.1|AZY06958.1|612915_613794_-|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP025382.1|AZY06957.1|611987_612803_-|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK
>CP025382.1|AZY06967.1|626420_627206_-|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP025382.1|AZY06968.1|627300_628710_-|lytic-transglycosylase
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP025382.1|AZY06969.1|628720_629521_-|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP025382.1|AZY06970.1|629541_630312_+|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP025382.1|AZY06971.1|630354_630822_+|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP025382.1|AZY06972.1|630818_631769_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP025382.1|AZY06973.1|633717_634596_-|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP025382.1|AZY06974.1|635522_638501_-|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP025382.1|AZY06975.1|638499_638868_+|hypothetical-protein
MHVGQGLGDAVHGNAPGGRVGANLGNAQRQDDFLAPRIEHDAVLAPDEILQACAPVEWRGRVLRAAAQLPRQGLAQIQPHAQLDASCEDSIGCMHGSSEPDLRNWKSPPPQFTQGARPDEHP
>CP025382.1|AZY06976.1|638854_639805_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT

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Crispr_ID: CP025382_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025382_3

1841011-1841138

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025382_3

>merge|CP025382|3|1841011-1841138|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP025382|3|3|1841011-1841138|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP025382.1\|AZY07965.1\|1848733_1849246_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP025382.1\|AZY07956.1\|1838653_1839604_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY07960.1\|1845509_1846001_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP025382.1\|AZY07961.1\|1846216_1846729_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP025382.1\|AZY07959.1\|1843220_1845257_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP025382.1\|AZY07951.1\|1832795_1833572_+\|3-oxoacyl-ACP-reductase	unknown	unknown	gnl\|CDD\|235546
CP025382.1\|AZY07963.1\|1847995_1848406_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
CP025382.1\|AZY07953.1\|1836445_1837087_+\|CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
CP025382.1\|AZY07955.1\|1837870_1838083_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP025382.1\|AZY07966.1\|1849375_1851238_+\|chaperone-protein-HscA	unknown	unknown	gnl\|CDD\|235360
CP025382.1\|AZY07949.1\|1831188_1831620_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
CP025382.1\|AZY07958.1\|1841940_1843143_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP025382.1\|AZY07947.1\|1829919_1830375_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
CP025382.1\|AZY07957.1\|1841161_1841890_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP025382.1\|AZY07964.1\|1848407_1848731_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP025382.1\|AZY07948.1\|1830388_1831192_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
CP025382.1\|AZY07952.1\|1835736_1836453_+\|3-oxoadipate-CoA-transferase	unknown	unknown	gnl\|CDD\|131482
CP025382.1\|AZY07962.1\|1846746_1847958_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP025382.1\|AZY07950.1\|1831616_1832774_+\|thiolase	unknown	unknown	gnl\|CDD\|180434
CP025382.1\|AZY07954.1\|1837121_1837853_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296

Protein	Function_ID	Function_description	E-value
CP025382.1\|AZY07965.1\|1848733_1849246_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP025382.1\|AZY07956.1\|1838653_1839604_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	4.98819e-22
CP025382.1\|AZY07960.1\|1845509_1846001_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP025382.1\|AZY07961.1\|1846216_1846729_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP025382.1\|AZY07959.1\|1843220_1845257_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP025382.1\|AZY07951.1\|1832795_1833572_+\|3-oxoacyl-ACP-reductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.84544e-78
CP025382.1\|AZY07963.1\|1847995_1848406_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99
CP025382.1\|AZY07953.1\|1836445_1837087_+\|CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	3.32577e-117
CP025382.1\|AZY07955.1\|1837870_1838083_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.69368e-19
CP025382.1\|AZY07966.1\|1849375_1851238_+\|chaperone-protein-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP025382.1\|AZY07949.1\|1831188_1831620_+\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	1.42164e-21
CP025382.1\|AZY07958.1\|1841940_1843143_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP025382.1\|AZY07947.1\|1829919_1830375_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.89129e-75
CP025382.1\|AZY07957.1\|1841161_1841890_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP025382.1\|AZY07964.1\|1848407_1848731_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP025382.1\|AZY07948.1\|1830388_1831192_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.56988e-63
CP025382.1\|AZY07952.1\|1835736_1836453_+\|3-oxoadipate-CoA-transferase	gnl\|CDD\|131482	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit. Various members of this family are characterized as the A subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The B subunit represents a different clade in pfam01144, described by TIGR02428. The two are found in general as tandem genes and occasionally as a fusion.	2.11885e-141
CP025382.1\|AZY07962.1\|1846746_1847958_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP025382.1\|AZY07950.1\|1831616_1832774_+\|thiolase	gnl\|CDD\|180434	PRK06158, PRK06158, thiolase; Provisional.	0
CP025382.1\|AZY07954.1\|1837121_1837853_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.17828e-106

>CP025382.1|AZY07956.1|1838653_1839604_+|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIPPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025382.1|AZY07955.1|1837870_1838083_+|hypothetical-protein
MGPAGIPADITAAWAKEIARVAALPDVSEKLATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ
>CP025382.1|AZY07954.1|1837121_1837853_+|hypothetical-protein
MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIALLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSLPYDTLKDFTYLSMAGMIPLAITANPRTAVNSMDELVGQLKKKPGSLTYSSSGNGTIIHLGGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVASEKRLKSLPEVPAIGESILVIS
>CP025382.1|AZY07953.1|1836445_1837087_+|CoA-transferase-subunit-B
MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEGKTIFFHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVLGGLQVSSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTFPLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP
>CP025382.1|AZY07952.1|1835736_1836453_+|3-oxoadipate-CoA-transferase
MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAHVADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE
>CP025382.1|AZY07951.1|1832795_1833572_+|3-oxoacyl-ACP-reductase
MQDKLLTLENRQVIVTGAGQGIGRALASAIAGLGGRVVAVDLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTAMIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTIGQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQIPLGRWGEADEVVRPVCFLLSDADSYVTGQHLSVNGGYTIGL
>CP025382.1|AZY07950.1|1831616_1832774_+|thiolase
MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVGLTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGLCDVALIAYGSNQRSGAGKLVSSMRPSPYEGAYKLARPVGAYALAASRYAAQYGLQKEQLGAVALAARQWAQKNPEAYMRAPLTMDECLASRLVCDPFSVRDCCLVTDGAAAVVMVRADRARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELYDAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTMVEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI
>CP025382.1|AZY07949.1|1831188_1831620_+|hypothetical-protein
MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAAPRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDVQVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ
>CP025382.1|AZY07948.1|1830388_1831192_+|enoyl-CoA-hydratase/isomerase-family-protein
MIMSVLEISRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRDDATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDGLVDLEKPVIAAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKALAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFESDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ
>CP025382.1|AZY07947.1|1829919_1830375_+|MaoC-family-dehydratase
MSFDSIAALKAFAGQPAAVGQPIVVDQSAIDTFGDVVHDRQWIHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVPSGSALVGSFRLARVDELGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY
>CP025382.1|AZY07957.1|1841161_1841890_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP025382.1|AZY07958.1|1841940_1843143_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP025382.1|AZY07959.1|1843220_1845257_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP025382.1|AZY07960.1|1845509_1846001_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP025382.1|AZY07961.1|1846216_1846729_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP025382.1|AZY07962.1|1846746_1847958_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP025382.1|AZY07963.1|1847995_1848406_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP025382.1|AZY07964.1|1848407_1848731_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP025382.1|AZY07965.1|1848733_1849246_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP025382.1|AZY07966.1|1849375_1851238_+|chaperone-protein-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP025382_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025382_4

2908662-2908778

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025382_4

>merge|CP025382|4|2908662-2908778|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>CP025382|4|4|2908662-2908778|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP025382.1\|AZY08816.1\|2918002_2919107_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP025382.1\|AZY08815.1\|2915240_2916218_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
CP025382.1\|AZY08808.1\|2900531_2902328_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225212
CP025382.1\|AZY08805.1\|2898026_2898581_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
CP025382.1\|AZY08801.1\|2890999_2893696_+\|alpha-ketoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|237267
CP025382.1\|AZY08811.1\|2908889_2912120_-\|autotransporter-SphB3	unknown	unknown	gnl\|CDD\|377133
CP025382.1\|AZY08806.1\|2898648_2899494_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
CP025382.1\|AZY08809.1\|2904227_2908154_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
CP025382.1\|AZY08812.1\|2912401_2913229_-\|TatD-family-deoxyribonuclease	unknown	unknown	gnl\|CDD\|238635
CP025382.1\|AZY08804.1\|2897029_2897980_+\|IS481-family-transposase-IS481v2	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY08814.1\|2913950_2915231_-\|lipoprotein-releasing-system-transmembrane-subunit-LolC	unknown	unknown	gnl\|CDD\|274034
CP025382.1\|AZY08810.1\|2908444_2908621_-\|hypothetical-protein	unknown	unknown	unknown
CP025382.1\|AZY08813.1\|2913262_2913958_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|213222
CP025382.1\|AZY08818.1\|2919898_2921419_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP025382.1\|AZY08819.1\|2921461_2921764_+\|hypothetical-protein	unknown	unknown	unknown
CP025382.1\|AZY08807.1\|2899563_2900532_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP025382.1\|AZY08802.1\|2893850_2896133_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
CP025382.1\|AZY08817.1\|2919136_2919892_+\|short-chain-dehydrogenase	unknown	unknown	gnl\|CDD\|180796
CP025382.1\|AZY10005.1\|2916199_2917900_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
CP025382.1\|AZY08803.1\|2896298_2896931_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|339870

Protein	Function_ID	Function_description	E-value
CP025382.1\|AZY08815.1\|2915240_2916218_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.08896e-20
CP025382.1\|AZY08808.1\|2900531_2902328_-\|hypothetical-protein	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	2.40146e-57
CP025382.1\|AZY08805.1\|2898026_2898581_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
CP025382.1\|AZY08801.1\|2890999_2893696_+\|alpha-ketoglutarate-dehydrogenase	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0
CP025382.1\|AZY08811.1\|2908889_2912120_-\|autotransporter-SphB3	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
CP025382.1\|AZY08806.1\|2898648_2899494_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
CP025382.1\|AZY08809.1\|2904227_2908154_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	8.97198e-85
CP025382.1\|AZY08812.1\|2912401_2913229_-\|TatD-family-deoxyribonuclease	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89
CP025382.1\|AZY08804.1\|2897029_2897980_+\|IS481-family-transposase-IS481v2	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.71464e-23
CP025382.1\|AZY08814.1\|2913950_2915231_-\|lipoprotein-releasing-system-transmembrane-subunit-LolC	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	6.22467e-159
CP025382.1\|AZY08816.1\|2918002_2919107_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
CP025382.1\|AZY08813.1\|2913262_2913958_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114
CP025382.1\|AZY08818.1\|2919898_2921419_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP025382.1\|AZY08807.1\|2899563_2900532_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
CP025382.1\|AZY08802.1\|2893850_2896133_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
CP025382.1\|AZY08817.1\|2919136_2919892_+\|short-chain-dehydrogenase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103
CP025382.1\|AZY10005.1\|2916199_2917900_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
CP025382.1\|AZY08803.1\|2896298_2896931_+\|fimbrial-protein	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	3.93152e-22

>CP025382.1|AZY08810.1|2908444_2908621_-|hypothetical-protein
MGAFCLFEECVAGIASRHPQWADVALPGDIQAEVLPRAPLPVHGAPAARYPGLFDVPD
>CP025382.1|AZY08809.1|2904227_2908154_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>CP025382.1|AZY08808.1|2900531_2902328_-|hypothetical-protein
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGDASDAGERVIAPFLWARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWLARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPSLAAPLPWRSSNARSCVLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLTAATRPAHAIAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYWRDSRAGPDAPLR
>CP025382.1|AZY08807.1|2899563_2900532_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>CP025382.1|AZY08806.1|2898648_2899494_-|PHP-domain-containing-protein
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>CP025382.1|AZY08805.1|2898026_2898581_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>CP025382.1|AZY08804.1|2897029_2897980_+|IS481-family-transposase-IS481v2
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLAGLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP025382.1|AZY08803.1|2896298_2896931_+|fimbrial-protein
MLPMQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSRTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>CP025382.1|AZY08802.1|2893850_2896133_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>CP025382.1|AZY08801.1|2890999_2893696_+|alpha-ketoglutarate-dehydrogenase
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>CP025382.1|AZY08811.1|2908889_2912120_-|autotransporter-SphB3
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>CP025382.1|AZY08812.1|2912401_2913229_-|TatD-family-deoxyribonuclease
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>CP025382.1|AZY08813.1|2913262_2913958_-|lipoprotein-releasing-system-ATP-binding-protein-LolD
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>CP025382.1|AZY08814.1|2913950_2915231_-|lipoprotein-releasing-system-transmembrane-subunit-LolC
MLKIPYELWIGARYAGMARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>CP025382.1|AZY08815.1|2915240_2916218_+|hypothetical-protein
MALTGTRTTIAAMLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHGRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>CP025382.1|AZY10005.1|2916199_2917900_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>CP025382.1|AZY08816.1|2918002_2919107_+|peptide-chain-release-factor-2
MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>CP025382.1|AZY08817.1|2919136_2919892_+|short-chain-dehydrogenase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>CP025382.1|AZY08818.1|2919898_2921419_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>CP025382.1|AZY08819.1|2921461_2921764_+|hypothetical-protein
MAALAYLLLSRRARPAAAPRPLRALPAGRRRMPLYLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQQVAIVLLAIGVVCAIAALVSFFRQRG

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Crispr_ID: CP025382_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP025382_5

3622384-3622477

Orphan

Consensus_repeat	Method
GTGCCTGTCCCGGCGGGGACAGGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP025382_5

>merge|CP025382|5|3622384-3622477|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCACGCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGGGTGCCTGTCCCGGCGGGGACAGGCAC

>CP025382|5|5|3622384-3622477|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCAC	GCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGG
GTGCCTGTCCCGGCGGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP025382.1\|AZY09410.1\|3623237_3624188_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP025382.1\|AZY09412.1\|3625440_3626331_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP025382.1\|AZY09416.1\|3629663_3630056_-\|acyl-dehydratase	unknown	unknown	gnl\|CDD\|239525
CP025382.1\|AZY09417.1\|3630052_3630448_-\|hypothetical-protein	unknown	unknown	unknown
CP025382.1\|AZY09402.1\|3613476_3614448_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP025382.1\|AZY09414.1\|3627483_3628455_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP025382.1\|AZY09401.1\|3612488_3613466_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP025382.1\|AZY09404.1\|3615292_3616525_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP025382.1\|AZY09418.1\|3630444_3630846_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
CP025382.1\|AZY09411.1\|3624286_3625234_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
CP025382.1\|AZY09400.1\|3611190_3612363_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP025382.1\|AZY09413.1\|3626327_3627476_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP025382.1\|AZY09406.1\|3617586_3618105_+\|methyltransferase	unknown	unknown	gnl\|CDD\|224204
CP025382.1\|AZY09415.1\|3628492_3629653_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
CP025382.1\|AZY09408.1\|3621826_3622297_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP025382.1\|AZY09407.1\|3621393_3621738_+\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP025382.1\|AZY09403.1\|3614514_3615300_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP025382.1\|AZY09405.1\|3616720_3617476_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP025382.1\|AZY09409.1\|3622707_3623106_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|234569
CP025382.1\|AZY10038.1\|3619893_3621294_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089

Protein	Function_ID	Function_description	E-value
CP025382.1\|AZY09410.1\|3623237_3624188_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP025382.1\|AZY09412.1\|3625440_3626331_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.25236e-65
CP025382.1\|AZY09416.1\|3629663_3630056_-\|acyl-dehydratase	gnl\|CDD\|239525	cd03441, R_hydratase_like, (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.	3.21769e-21
CP025382.1\|AZY09402.1\|3613476_3614448_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP025382.1\|AZY09414.1\|3627483_3628455_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	5.90573e-128
CP025382.1\|AZY09401.1\|3612488_3613466_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP025382.1\|AZY09404.1\|3615292_3616525_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP025382.1\|AZY09418.1\|3630444_3630846_-\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	5.62422e-24
CP025382.1\|AZY09411.1\|3624286_3625234_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.66209e-66
CP025382.1\|AZY09400.1\|3611190_3612363_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP025382.1\|AZY09413.1\|3626327_3627476_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	7.23571e-127
CP025382.1\|AZY09406.1\|3617586_3618105_+\|methyltransferase	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP025382.1\|AZY09415.1\|3628492_3629653_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	4.16688e-115
CP025382.1\|AZY09408.1\|3621826_3622297_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP025382.1\|AZY09407.1\|3621393_3621738_+\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP025382.1\|AZY09403.1\|3614514_3615300_-\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP025382.1\|AZY09405.1\|3616720_3617476_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP025382.1\|AZY09409.1\|3622707_3623106_+\|elongation-factor-G	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP025382.1\|AZY10038.1\|3619893_3621294_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109

>CP025382.1|AZY09408.1|3621826_3622297_+|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP025382.1|AZY09407.1|3621393_3621738_+|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP025382.1|AZY10038.1|3619893_3621294_+|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP025382.1|AZY09406.1|3617586_3618105_+|methyltransferase
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP025382.1|AZY09405.1|3616720_3617476_-|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP025382.1|AZY09404.1|3615292_3616525_-|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP025382.1|AZY09403.1|3614514_3615300_-|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP025382.1|AZY09402.1|3613476_3614448_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP025382.1|AZY09401.1|3612488_3613466_+|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP025382.1|AZY09400.1|3611190_3612363_-|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR
>CP025382.1|AZY09409.1|3622707_3623106_+|elongation-factor-G
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP025382.1|AZY09410.1|3623237_3624188_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP025382.1|AZY09411.1|3624286_3625234_-|dihydrodipicolinate-synthase-family-protein
MQASHGARIDEQTSGVYVIAATPFADDGELDLASLDSLTDFYLDKDVAGLTILGMMGEASKLTEAETATVMTRILKRVDGRVPVVVGVSHPSNRHLERLARQAMELGAAGVMVAPAAGRHTDDQVYGYYATVAERLGADIPICLQDFPQSAGVHTSVAVIHRLVDDFPQVVMLKHEDFPGMRKLSQVRARSEAEGRRRISILVGNGGLFLPQEMLRGADGAMTGFAYPEMLVQVCRLFAAGKAEAAEDLFNLYLPLLRHEFQYGIGLALRKETLRRRGAIRSAYVRQPGPALDAVDHAELGRLIARLEAQLGRAA
>CP025382.1|AZY09412.1|3625440_3626331_+|LysR-family-transcriptional-regulator
MKLNLRQIEVFRAVMITGSIRGASELLFVSQPAVSRLLSHMEQRIGFALFERIRGRLYATLEARKLFHEVEAVYAGVQRVNDMARDLFEHQEGILNLVASPSLGQMLIPAAIAQYRQAHPQVKLSFHHLTQAPLTERLLKRQADLALTILPAGHPNLEQEEIGAARMVLICPPGHPLAGREPVGAEALAPYPLVAYERGSAFGQKLQAWFDAQSVAARPVIEVGSPQNTCALVQAGAGVALVDEFSARSWPGAGFVMRPVRDLAPLTAYLLRLREEPASHLMQSFIETLRRVMRRA
>CP025382.1|AZY09413.1|3626327_3627476_-|CoA-transferase
MLNHALAGITVLDFSQGIAGPHGACLLGEMGAEVIKIEPPAGDWLRGLGHRQGGTSVLFGYFNRGKAGVALDLKDHAQRRQALALIDKADVLIESNRPGVMARLGLGYEQARQRNPGLVYISVTGFGQDGPHRDLPATDAAMQAYSGFSFGAGDMRDPVRVRVSVVDIVTGVYVSNAALAALMARHGNQGQGQYIDLSLMHGISAVQGAKYAEHAATRGVISRELYAAIGIYPTRDGHIALSAMRDQQVTDFIGLAGRADLLADPRYATQQARYDNQDELRALIAAELAKQPTAHWIEAARRIDLICQPVQTYDQFRQDPQVRTYELFQDMDLGYDMPLPAVRMPGMTATQASLRPPPRLGADTAAVLRRHGASPPSADATP
>CP025382.1|AZY09414.1|3627483_3628455_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHGKNALRALLAGLALGATAAGAAPYPERPVRLIAPIAVGGLTDTLARLVASGLADKLGQPVVVENKPGAGGIIGMEAAAQAAPDGYTLILVYQGVAAVNASLYKNLPYDTRRDFAPVAGLGNFPLVLVASPASGIQSVGALLERAGKQAKAPSYASAGNATTSHLTMELFKNASGLQALHVPYKGEGPANTDVAGGQVDIAFSSLASVAPLVKSGRLVALGISTPERSAVLPDVPTIAQAGVADFEAVGWYGLLAPAGTPAEVVAKLSDAVAAVLDQPAIRAKLEALGVNARATPAADFGRQIDAETEKWRAVIQTAGITLD
>CP025382.1|AZY09415.1|3628492_3629653_-|acyl-CoA-dehydrogenase
MQFTHEHRELARTTRRIIAEHLDPYLDEWEAAQMFPAHQVMKALGSAGLLGIGKPAEYGGMALDFSYEMVFAETLGEVRSSGLSSAIGVQSTMCTPALARHGSDALKRAYLAPTIAGDLVGCIGASEASAGSDVSQIKTWARRDGDDYVINGSKMWITNGVQGDWICLLCNTSQEGGPHKNKSLIIVPLDTPGVSVSRKLDKLVLRASDTAELFFDDVRVPVSNRIGAENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQMQTEIEALRSLLYRAIGQYLDGQDITQLASMAKYCAGRLSMRIPNECLQFWGGQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTMGIHPGKRA
>CP025382.1|AZY09416.1|3629663_3630056_-|acyl-dehydratase
MRNTMTQRLEEVSMRVTQADIDIYAELTDDFNPLHVDPAFAATTPMGGTIAHGTLSVNLIWQSLARSLGAAALARIDLDIRFLKPLFAGGAITAGGQPDAAEPDRYEVWVKGADGATLIAGHARLAPITD
>CP025382.1|AZY09417.1|3630052_3630448_-|hypothetical-protein
MTQLYTYETFTPGTVLGEWAEPLDARLVATWGRLFGAEARDQPARQVGLTVALMIRAYLNVVTPRPPGNIHAQQILSIDGLPGVGETVRSRIRCLGKEIRRERRYLQLEVSGVGERERNLYTGRMNLIWAA
>CP025382.1|AZY09418.1|3630444_3630846_-|hypothetical-protein
MDKPPITPNAESLPFWQGCRDHRLRYQQCASCGTVQRIPRAVCTHCHGRALQWRDSAGQGVVLSHTTVRRAPTPAFKADTPYAIALVDLDEGFRLMVNVRGGAGAPLAIGARVRIVFEARGDGAVPIAEMETP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 123122

110

Planktothrix_phage(16.67%)

tRNA,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY06459.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AZY06460.1\|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA
AZY06461.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AZY06462.1\|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA
AZY06463.1\|4214_5132_+	chromosome partitioning protein ParB	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AZY06464.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AZY06465.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AZY06466.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AZY06467.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AZY06468.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AZY06469.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AZY06470.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AZY06471.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AZY06472.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AZY09845.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AZY06473.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AZY06474.1\|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA
AZY06475.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AZY06476.1\|27282_28233_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06477.1\|28314_28650_-	CoA transferase	NA	NA	NA	NA
AZY06478.1\|28674_29109_-	hypothetical protein	NA	NA	NA	NA
AZY06479.1\|29141_30368_-	thiolase family protein	NA	NA	NA	NA
AZY06480.1\|30364_30862_-	dehydratase	NA	NA	NA	NA
AZY09846.1\|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY06481.1\|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY06482.1\|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY06483.1\|34625_35576_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06484.1\|35572_36763_-	MFS transporter	NA	NA	NA	NA
AZY06485.1\|36949_37924_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AZY06486.1\|37925_40064_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AZY06487.1\|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AZY06488.1\|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZY06489.1\|41318_42212_+	M48 family peptidase	NA	NA	NA	NA
AZY06490.1\|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA
AZY06491.1\|42687_43218_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AZY06492.1\|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA
AZY06493.1\|43663_44614_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06494.1\|45113_45749_+	hypothetical protein	NA	NA	NA	NA
AZY06495.1\|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AZY06496.1\|46084_46978_+	hypothetical protein	NA	NA	NA	NA
AZY06497.1\|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AZY06498.1\|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AZY06499.1\|51190_52141_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06500.1\|52183_53440_+	MFS transporter	NA	NA	NA	NA
AZY06501.1\|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AZY06502.1\|55411_56002_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AZY06503.1\|56026_56716_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY06504.1\|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY06505.1\|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY06506.1\|58546_59497_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06507.1\|60297_61524_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZY06508.1\|61523_61943_-	transcriptional regulator	NA	NA	NA	NA
AZY06509.1\|62126_63068_-	hypothetical protein	NA	NA	NA	NA
AZY09847.1\|63491_64328_-	hypothetical protein	NA	NA	NA	NA
AZY06510.1\|64522_65104_-\|protease	protease	NA	NA	NA	NA
AZY06511.1\|65116_65434_-	ferredoxin	NA	NA	NA	NA
AZY06512.1\|65537_66596_-	oxidoreductase	NA	NA	NA	NA
AZY06513.1\|66630_67902_-	TRAP transporter large permease	NA	NA	NA	NA
AZY06514.1\|68531_69713_-	hypothetical protein	NA	NA	NA	NA
AZY06515.1\|70134_71085_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06516.1\|71178_71493_+\|transposase	transposase	NA	NA	NA	NA
AZY06517.1\|72685_74593_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	1.1e-117	37.2
AZY06518.1\|74754_75375_-	glutathione S-transferase	NA	NA	NA	NA
AZY06519.1\|75406_75988_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	A0A1W6DX33	Sphingobium_phage	1.7e-05	54.3
AZY06520.1\|76076_76328_-	hypothetical protein	NA	NA	NA	NA
AZY09848.1\|76329_77079_-	hypothetical protein	NA	NA	NA	NA
AZY06521.1\|77277_78687_+	signal recognition particle protein	NA	NA	NA	NA
AZY06522.1\|78683_79634_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09849.1\|79708_80653_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06523.1\|80649_82524_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AZY06524.1\|83871_84576_-	DUF2837 domain-containing protein	NA	NA	NA	NA
AZY06525.1\|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AZY06526.1\|85940_86534_-	sugar transferase	NA	NA	NA	NA
AZY06527.1\|86530_87763_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA
AZY06528.1\|87780_89040_-	glycosyltransferase WbuB	NA	NA	NA	NA
AZY06529.1\|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AZY06530.1\|90159_91260_-	aminotransferase DegT	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AZY06531.1\|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA
AZY06532.1\|91842_92895_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AZY09850.1\|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AZY06533.1\|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AZY06534.1\|95337_95493_-	hypothetical protein	NA	NA	NA	NA
AZY06535.1\|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA
AZY06536.1\|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AZY06537.1\|97252_98389_+	ABC transporter permease	NA	NA	NA	NA
AZY06538.1\|98388_99228_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AZY06539.1\|100160_100763_+	hypothetical protein	NA	NA	NA	NA
AZY06540.1\|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY06541.1\|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AZY06542.1\|102837_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA
AZY06543.1\|103857_104133_+	DUF493 domain-containing protein	NA	NA	NA	NA
AZY06544.1\|104140_104803_+	octanoyltransferase	NA	NA	NA	NA
AZY06545.1\|104864_105866_+	lipoyl synthase	NA	NA	NA	NA
AZY06546.1\|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AZY06547.1\|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AZY06548.1\|107379_108441_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AZY06549.1\|108476_109427_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06550.1\|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA
AZY06551.1\|111601_112231_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA
AZY06552.1\|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA
AZY06553.1\|112985_114668_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AZY09851.1\|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AZY06554.1\|115393_115711_+	hypothetical protein	NA	NA	NA	NA
AZY09852.1\|115993_117010_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY06555.1\|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY06556.1\|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA
AZY06557.1\|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY06558.1\|120103_121144_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AZY06559.1\|121249_122071_-	phosphodiesterase	NA	NA	NA	NA
AZY06560.1\|122171_123122_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

165941 : 226464

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY06592.1\|165941_166892_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06593.1\|168335_169238_-	hypothetical protein	NA	NA	NA	NA
AZY06594.1\|169215_169845_-	LemA family protein	NA	NA	NA	NA
AZY06595.1\|170175_171558_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AZY06596.1\|171591_172221_+	threonine transporter RhtB	NA	NA	NA	NA
AZY06597.1\|172269_173877_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AZY06598.1\|173901_174585_+	hypothetical protein	NA	NA	NA	NA
AZY06599.1\|174666_175143_-	bacterioferritin	NA	NA	NA	NA
AZY06600.1\|175349_176300_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06601.1\|177415_177943_+	lipoprotein	NA	NA	NA	NA
AZY06602.1\|178034_178850_+	lipoprotein	NA	NA	NA	NA
AZY06603.1\|178910_179645_+	sulfurtransferase	NA	NA	NA	NA
AZY06604.1\|179682_181761_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AZY06605.1\|182010_182283_-	hypothetical protein	NA	NA	NA	NA
AZY06606.1\|182381_183470_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZY06607.1\|183473_185378_+	outer membrane protein assembly factor	NA	NA	NA	NA
AZY06608.1\|185374_189061_+	DUF490 domain-containing protein	NA	NA	NA	NA
AZY06609.1\|189121_189685_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AZY06610.1\|189692_190115_-	glyoxalase	NA	NA	NA	NA
AZY06611.1\|190142_190562_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AZY09857.1\|190590_191037_-	N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AZY06612.1\|191163_191661_+	hypothetical protein	NA	NA	NA	NA
AZY06613.1\|191815_194086_+	lysine decarboxylase	NA	NA	NA	NA
AZY06614.1\|194134_195367_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY06615.1\|195465_196416_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06616.1\|196461_197154_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AZY06617.1\|197150_198044_+	ZIP family metal transporter	NA	NA	NA	NA
AZY06618.1\|198438_199539_+	aminomethyltransferase	NA	NA	NA	NA
AZY06619.1\|199620_199995_+	glycine cleavage system protein H	NA	NA	NA	NA
AZY06620.1\|200054_202919_+	glycine dehydrogenase	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AZY06621.1\|203063_203804_-	FadR family transcriptional regulator	NA	NA	NA	NA
AZY06622.1\|203873_205085_+	CoA transferase	NA	NA	NA	NA
AZY06623.1\|205113_206082_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06624.1\|206695_207646_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06625.1\|207802_208126_+	PsiF repeat family protein	NA	NA	NA	NA
AZY06626.1\|208230_209280_-	cyclase	NA	NA	NA	NA
AZY06627.1\|209276_210101_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AZY06628.1\|210101_210398_-	YciI family protein	NA	NA	NA	NA
AZY06629.1\|210423_210699_-	muconolactone delta-isomerase	NA	NA	NA	NA
AZY06630.1\|210755_211400_-	CoA transferase subunit B	NA	NA	NA	NA
AZY06631.1\|211399_212086_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY09858.1\|212215_213067_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY06632.1\|213117_213843_-	short-chain dehydrogenase	NA	NA	NA	NA
AZY06633.1\|213874_215224_-	short-chain fatty acid transporter	NA	NA	NA	NA
AZY06634.1\|215335_216268_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
AZY06635.1\|216725_219521_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AZY06636.1\|220114_223057_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AZY06637.1\|223128_223848_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AZY06638.1\|223886_224435_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AZY06639.1\|224589_225489_+	virginiamycin B lyase	NA	NA	NA	NA
AZY06640.1\|225513_226464_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

234396 : 287984

Bacillus_phage(25.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY06648.1\|234396_235347_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06649.1\|235433_236384_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06650.1\|236380_237331_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06651.1\|237429_238227_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZY06652.1\|239176_239587_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AZY06653.1\|240608_241352_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY06654.1\|241395_242439_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY06655.1\|242609_244712_+	hypothetical protein	NA	NA	NA	NA
AZY06656.1\|246122_247079_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06657.1\|247097_247589_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AZY06658.1\|247585_248941_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AZY06659.1\|248941_249640_-	HAD-IB family hydrolase	NA	NA	NA	NA
AZY06660.1\|249636_250338_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AZY06661.1\|250590_251640_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AZY06662.1\|251745_252687_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AZY06663.1\|252683_254573_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AZY06664.1\|254659_255298_+	hypothetical protein	NA	NA	NA	NA
AZY09859.1\|255440_256685_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AZY06665.1\|256756_257293_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AZY06666.1\|257444_258836_+	class II fumarate hydratase	NA	NA	NA	NA
AZY06667.1\|258852_259833_-	AEC family transporter	NA	NA	NA	NA
AZY06668.1\|259968_260952_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AZY06669.1\|261016_261916_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY06670.1\|262022_263777_+	gamma-glutamyltransferase	NA	NA	NA	NA
AZY06671.1\|263784_264909_-	CoA transferase	NA	NA	NA	NA
AZY06672.1\|264922_265903_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06673.1\|266633_267584_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06674.1\|268143_268689_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AZY06675.1\|268772_270392_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AZY06676.1\|270407_271562_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AZY06677.1\|271575_271701_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AZY06678.1\|271697_273449_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AZY06679.1\|273445_275125_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AZY06680.1\|275160_275736_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AZY06681.1\|276878_277157_+	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY06682.1\|278200_279151_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06683.1\|279137_279353_-	hypothetical protein	NA	NA	NA	NA
AZY06684.1\|279428_279590_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AZY06685.1\|279597_279738_+	hypothetical protein	NA	NA	NA	NA
AZY06686.1\|280256_280706_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AZY06687.1\|280715_281327_-	glutathione S-transferase	NA	NA	NA	NA
AZY06688.1\|281485_282340_-	cytochrome c1	NA	NA	NA	NA
AZY06689.1\|282359_283742_-	cytochrome b	NA	NA	NA	NA
AZY06690.1\|283806_284448_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AZY06691.1\|284587_285046_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AZY06692.1\|285070_285847_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AZY09860.1\|285900_287037_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AZY06693.1\|287033_287984_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

556369 : 615669

Acinetobacter_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY06915.1\|556369_557320_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06916.1\|558643_559420_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY06917.1\|559454_561227_+	PDZ domain-containing protein	NA	NA	NA	NA
AZY06918.1\|561228_562131_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AZY06919.1\|562255_562615_+	dihydroneopterin aldolase	NA	NA	NA	NA
AZY06920.1\|562646_563609_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AZY06921.1\|563707_564658_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06922.1\|564670_565606_-	hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AZY06923.1\|565665_566505_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AZY06924.1\|566501_567671_-	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA
AZY06925.1\|567667_568957_-	hypothetical protein	NA	NA	NA	NA
AZY06926.1\|568999_569374_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AZY06927.1\|569479_570217_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AZY06928.1\|570224_570929_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY06929.1\|571192_572713_+	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AZY06930.1\|572768_573332_+	type 1 glutamine amidotransferase	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AZY06931.1\|573350_574382_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AZY06932.1\|574378_575167_+	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AZY06933.1\|575342_576332_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06934.1\|578088_579039_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06935.1\|580261_581164_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY06936.1\|581165_582020_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AZY06937.1\|582066_583176_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY06938.1\|583186_583705_-	flavin reductase	NA	NA	NA	NA
AZY06939.1\|583734_584367_-	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AZY06940.1\|584438_585098_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AZY06941.1\|585094_586315_-	MFS transporter	NA	NA	NA	NA
AZY06942.1\|586583_587456_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AZY06943.1\|587611_588349_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY06944.1\|588351_589947_-	acyl-CoA synthetase	NA	NA	NA	NA
AZY09881.1\|590078_591068_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06945.1\|591064_591775_+	oxidoreductase	NA	NA	NA	NA
AZY09882.1\|591870_592887_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY06946.1\|593158_593785_-	aminotransferase	NA	NA	NA	NA
AZY06947.1\|593840_594968_-	aminodeoxychorismate synthase, component I	S4VT78	Pandoravirus	3.8e-38	37.8
AZY06948.1\|594973_600691_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AZY06949.1\|600974_601190_+	hypothetical protein	NA	NA	NA	NA
AZY06950.1\|601258_602203_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AZY06951.1\|602391_603327_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AZY06952.1\|603444_605016_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY06953.1\|605095_606304_+	ABC transporter permease	NA	NA	NA	NA
AZY06954.1\|606801_607719_+	EamA/RhaT family transporter	NA	NA	NA	NA
AZY06955.1\|610079_610301_+	hypothetical protein	NA	NA	NA	NA
AZY09883.1\|610631_611648_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY06956.1\|611732_611984_-	cell division topological specificity factor	NA	NA	NA	NA
AZY06957.1\|611987_612803_-	septum site-determining protein MinD	NA	NA	NA	NA
AZY06958.1\|612915_613794_-	septum site-determining protein MinC	NA	NA	NA	NA
AZY06959.1\|613905_615669_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0

DBSCAN-SWA_5

621824 : 675565

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY06963.1\|621824_622775_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06964.1\|622843_623842_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06965.1\|623846_624527_-	DUF533 domain-containing protein	NA	NA	NA	NA
AZY06966.1\|624664_625057_+	OsmC family peroxiredoxin	NA	NA	NA	NA
AZY09884.1\|625164_626181_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY06967.1\|626420_627206_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AZY06968.1\|627300_628710_-	lytic transglycosylase	NA	NA	NA	NA
AZY06969.1\|628720_629521_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AZY06970.1\|629541_630312_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY06971.1\|630354_630822_+	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AZY06972.1\|630818_631769_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06973.1\|633717_634596_-	fatty acid desaturase	NA	NA	NA	NA
AZY06974.1\|635522_638501_-	hypothetical protein	NA	NA	NA	NA
AZY06975.1\|638499_638868_+	hypothetical protein	NA	NA	NA	NA
AZY06976.1\|638854_639805_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06977.1\|639801_640890_-	hypothetical protein	NA	NA	NA	NA
AZY06978.1\|640925_641789_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AZY06979.1\|642928_643318_-	DNA-binding protein	NA	NA	NA	NA
AZY06980.1\|643321_644104_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY06981.1\|644137_644890_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZY06982.1\|645198_646338_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY06983.1\|646334_647126_+	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AZY06984.1\|647122_647872_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AZY06985.1\|647868_648741_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY06986.1\|648740_649742_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY06987.1\|649738_650902_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY06988.1\|650927_651611_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY06989.1\|651564_652899_+	CoA ligase	NA	NA	NA	NA
AZY06990.1\|652891_653986_+	CoA transferase	NA	NA	NA	NA
AZY09885.1\|654752_655703_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY06991.1\|657643_658903_+	hypothetical protein	NA	NA	NA	NA
AZY06992.1\|658899_660438_+	SpoVR family protein	NA	NA	NA	NA
AZY06993.1\|660434_661631_-	MFS transporter	NA	NA	NA	NA
AZY06994.1\|661627_663019_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZY06995.1\|663015_664032_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY06996.1\|664100_665336_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY06997.1\|665436_666231_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY06998.1\|666600_667008_+	GFA family protein	NA	NA	NA	NA
AZY06999.1\|667425_667698_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AZY07000.1\|668279_669134_+	urease accessory protein UreD	NA	NA	NA	NA
AZY07001.1\|669234_669537_+	urease subunit gamma	NA	NA	NA	NA
AZY07002.1\|669563_670199_+	urease accessory protein UreJ	NA	NA	NA	NA
AZY07003.1\|670215_670524_+	urease subunit beta	NA	NA	NA	NA
AZY07004.1\|670520_672236_+	urease subunit alpha	NA	NA	NA	NA
AZY07005.1\|672238_672856_+	urease accessory protein UreE	NA	NA	NA	NA
AZY07006.1\|672956_673541_+	urease accessory protein UreF	NA	NA	NA	NA
AZY07007.1\|673565_674210_+	urease accessory protein UreG	NA	NA	NA	NA
AZY07008.1\|674614_675565_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

724452 : 764453

Pseudomonas_phage(33.33%)

tRNA,integrase,protease,transposase

attL 721751:721769|attR 741639:741657

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
721751:721769	attL	NA	NA	NA	NA
AZY07044.1\|724452_725100_+\|tRNA	peptidyl-tRNA hydrolase	NA	NA	NA	NA
AZY07045.1\|725096_725879_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AZY07046.1\|725951_727043_+	redox-regulated ATPase YchF	NA	NA	NA	NA
AZY07047.1\|727322_728450_+\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AZY07048.1\|728791_729838_+	Fic family protein	NA	NA	NA	NA
AZY09889.1\|729848_729989_+	DEAD/DEAH box helicase	NA	NA	NA	NA
AZY07049.1\|729985_733105_+	restriction endonuclease	NA	NA	NA	NA
AZY07050.1\|733106_736058_+	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AZY07051.1\|736073_737285_+	chromosome segregation protein SMC	NA	NA	NA	NA
AZY07052.1\|737281_737482_+	hypothetical protein	NA	NA	NA	NA
AZY07053.1\|737468_738419_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07054.1\|738435_738930_+	DUF4276 domain-containing protein	NA	NA	NA	NA
AZY07055.1\|738933_739191_+	hypothetical protein	NA	NA	NA	NA
AZY07056.1\|739215_740646_+	ATP-dependent helicase	NA	NA	NA	NA
AZY07057.1\|740727_741012_+	ATP-dependent helicase	A0A1V0SIN4	Klosneuvirus	6.8e-05	34.1
AZY07058.1\|741795_742746_-\|transposase	IS481 family transposase	NA	NA	NA	NA
741639:741657	attR	NA	NA	NA	NA
AZY07059.1\|743164_745729_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AZY07060.1\|745773_747627_-	hypothetical protein	NA	NA	NA	NA
AZY07061.1\|747959_749531_+	winged helix family transcriptional regulator	NA	NA	NA	NA
AZY07062.1\|750972_751923_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07063.1\|752008_752749_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY07064.1\|752975_753923_-	hypothetical protein	NA	NA	NA	NA
AZY07065.1\|755310_756261_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07066.1\|756247_756436_-	hypothetical protein	NA	NA	NA	NA
AZY07067.1\|756454_757270_+	MerR family transcriptional regulator	NA	NA	NA	NA
AZY07068.1\|757402_758842_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY07069.1\|758855_759197_+	cupin domain-containing protein	NA	NA	NA	NA
AZY07070.1\|759251_760907_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY07071.1\|761058_762069_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY07072.1\|762201_762975_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07073.1\|763318_763516_+	hypothetical protein	NA	NA	NA	NA
AZY07074.1\|763502_764453_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

774380 : 821998

Bovine_alphaherpesvirus(10.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07082.1\|774380_775331_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07083.1\|775469_776222_+	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
AZY07084.1\|776460_778185_+	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	9.5e-49	32.9
AZY07085.1\|778204_779464_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AZY07086.1\|779478_780573_-	CCA-adding enzyme	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
AZY07087.1\|780569_782696_-	lytic transglycosylase	A0A0S2SXL7	Bacillus_phage	5.5e-14	36.6
AZY07088.1\|782708_783389_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AZY09893.1\|783666_785040_+	MFS transporter	NA	NA	NA	NA
AZY07089.1\|785041_786061_+	histone deacetylase family protein	A0A2K9L473	Tupanvirus	3.4e-22	31.7
AZY07090.1\|786124_787096_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07091.1\|787160_788111_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07092.1\|788209_789052_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AZY07093.1\|789051_789387_-\|holin	phage holin family protein	NA	NA	NA	NA
AZY07094.1\|789457_790876_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AZY07095.1\|791155_792196_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AZY07096.1\|792275_792527_-	DUF1289 domain-containing protein	NA	NA	NA	NA
AZY07097.1\|792637_793936_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AZY07098.1\|794084_794939_+	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
AZY07099.1\|794935_795826_+	acyltransferase	NA	NA	NA	NA
AZY07100.1\|795868_796780_+	diaminopimelate epimerase	NA	NA	NA	NA
AZY07101.1\|796806_797499_+	DUF484 domain-containing protein	NA	NA	NA	NA
AZY07102.1\|797513_798494_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AZY07103.1\|798506_800648_-	TonB-dependent receptor	NA	NA	NA	NA
AZY07104.1\|800696_801665_-	nickel transporter	NA	NA	NA	NA
AZY09894.1\|801655_802279_-	DUF1007 domain-containing protein	NA	NA	NA	NA
AZY07105.1\|802284_803220_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07106.1\|803216_804113_-	metal ABC transporter permease	NA	NA	NA	NA
AZY07107.1\|804109_804832_-	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AZY07108.1\|804822_805023_-	hypothetical protein	NA	NA	NA	NA
AZY07109.1\|805160_805664_+	transcriptional repressor	NA	NA	NA	NA
AZY07110.1\|805940_807056_+	GTP-binding protein	NA	NA	NA	NA
AZY07111.1\|807198_807663_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AZY07112.1\|807810_808350_+	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA
AZY07113.1\|808371_809706_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AZY09895.1\|809719_810025_-	RND transporter	NA	NA	NA	NA
AZY07114.1\|810449_811031_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AZY07115.1\|811112_812063_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07116.1\|812161_813112_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07117.1\|813552_814458_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY07118.1\|814513_816121_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AZY07119.1\|816374_817880_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AZY07120.1\|817894_818359_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AZY07121.1\|818648_819599_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07122.1\|819761_820292_+	hypothetical protein	NA	NA	NA	NA
AZY07123.1\|820291_820603_+	cell division protein ZapA	NA	NA	NA	NA
AZY07124.1\|821047_821998_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

1006212 : 1100249

Bacillus_virus(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07265.1\|1006212_1007163_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07266.1\|1007265_1007928_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY07267.1\|1008030_1008441_-	hypothetical protein	NA	NA	NA	NA
AZY07268.1\|1008545_1009547_+	amidase	NA	NA	NA	NA
AZY07269.1\|1009549_1010746_+	CoA transferase	NA	NA	NA	NA
AZY07270.1\|1010766_1011570_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY07271.1\|1011650_1011947_+	histidine kinase	NA	NA	NA	NA
AZY07272.1\|1011977_1012541_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY09908.1\|1012581_1013439_+	ABC transporter permease	NA	NA	NA	NA
AZY07273.1\|1013446_1014196_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-29	33.5
AZY07274.1\|1014217_1015090_+	hypothetical protein	NA	NA	NA	NA
AZY07275.1\|1015118_1015898_+	KR domain-containing protein	NA	NA	NA	NA
AZY07276.1\|1015931_1016729_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY07277.1\|1018180_1019353_+	hypothetical protein	A0A2H4PQU7	Staphylococcus_phage	1.1e-59	39.6
AZY07278.1\|1019383_1019776_+	RidA family protein	NA	NA	NA	NA
AZY07279.1\|1019769_1020630_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY07280.1\|1020633_1021596_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY09909.1\|1022372_1023062_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.8e-12	28.8
AZY07281.1\|1023922_1024873_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07282.1\|1025222_1026092_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07283.1\|1026162_1026858_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AZY07284.1\|1026847_1027357_+	nucleoside deaminase	NA	NA	NA	NA
AZY07285.1\|1027353_1028574_+	MFS transporter	NA	NA	NA	NA
AZY07286.1\|1028521_1029424_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07287.1\|1030310_1031597_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07288.1\|1031635_1033009_+	amidase	NA	NA	NA	NA
AZY07289.1\|1033047_1033749_-	riboflavin synthase	NA	NA	NA	NA
AZY07290.1\|1034047_1035037_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY07291.1\|1035137_1035599_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY07292.1\|1035614_1036163_-	cysteine dioxygenase	NA	NA	NA	NA
AZY07293.1\|1036304_1037780_-	long-chain fatty acid--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
AZY07294.1\|1037885_1038977_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AZY07295.1\|1038980_1039763_-	ABC transporter permease	NA	NA	NA	NA
AZY07296.1\|1039772_1040561_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-33	40.0
AZY07297.1\|1041686_1042121_-	PaaI family thioesterase	NA	NA	NA	NA
AZY07298.1\|1042117_1043128_-	alcohol dehydrogenase	NA	NA	NA	NA
AZY07299.1\|1043171_1044098_-	VOC family protein	NA	NA	NA	NA
AZY07300.1\|1044384_1044753_+	DUF861 domain-containing protein	NA	NA	NA	NA
AZY09910.1\|1044969_1045920_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09911.1\|1045901_1048391_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-86	33.8
AZY07301.1\|1048439_1049132_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
AZY07302.1\|1049204_1050404_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AZY07303.1\|1050421_1051327_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07304.1\|1051442_1052372_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY09912.1\|1052397_1053744_+	MFS transporter	NA	NA	NA	NA
AZY09913.1\|1053771_1054521_+	NAD(P)-dependent oxidoreductase	A0A0M4JSW6	Mollivirus	1.2e-11	26.4
AZY07305.1\|1054534_1055317_+	short-chain dehydrogenase	NA	NA	NA	NA
AZY07306.1\|1055509_1056460_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07307.1\|1056521_1057667_-	porin	NA	NA	NA	NA
AZY07308.1\|1058143_1058980_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AZY07309.1\|1059049_1060015_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07310.1\|1060011_1060962_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07311.1\|1060948_1061143_-	hypothetical protein	NA	NA	NA	NA
AZY07312.1\|1061347_1061890_+	hypothetical protein	NA	NA	NA	NA
AZY07313.1\|1062925_1063876_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07314.1\|1064117_1064486_+	hypothetical protein	NA	NA	NA	NA
AZY07315.1\|1064531_1065656_+	hypothetical protein	NA	NA	NA	NA
AZY09914.1\|1066790_1067531_-	oxidoreductase	NA	NA	NA	NA
AZY07316.1\|1067634_1068255_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY07317.1\|1068358_1069309_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07318.1\|1069305_1071414_-	AsmA family protein	NA	NA	NA	NA
AZY07319.1\|1071558_1072218_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AZY07320.1\|1072249_1072714_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AZY07321.1\|1072989_1073175_+	hypothetical protein	NA	NA	NA	NA
AZY07322.1\|1073226_1073979_-	DNA-binding protein	NA	NA	NA	NA
AZY07323.1\|1073985_1075248_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07324.1\|1075289_1076528_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07325.1\|1077605_1078733_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AZY07326.1\|1078743_1079571_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AZY07327.1\|1079557_1080424_-	sugar ABC transporter permease	NA	NA	NA	NA
AZY07328.1\|1081790_1082195_-	hypothetical protein	NA	NA	NA	NA
AZY07329.1\|1082286_1083237_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09915.1\|1083606_1084518_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY07330.1\|1084532_1085243_+	FadR family transcriptional regulator	NA	NA	NA	NA
AZY07331.1\|1085239_1086484_+	DUF521 domain-containing protein	NA	NA	NA	NA
AZY07332.1\|1086485_1086920_+	DUF126 domain-containing protein	NA	NA	NA	NA
AZY07333.1\|1086948_1087254_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZY07334.1\|1087147_1087366_+	hypothetical protein	NA	NA	NA	NA
AZY07335.1\|1087352_1088303_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07336.1\|1088359_1089508_-	alcohol dehydrogenase	NA	NA	NA	NA
AZY07337.1\|1089588_1090539_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07338.1\|1091070_1091868_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07339.1\|1091915_1092569_-	ABC transporter permease	NA	NA	NA	NA
AZY07340.1\|1092525_1093614_-	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AZY07341.1\|1093778_1096004_-	glycosyl hydrolase	NA	NA	NA	NA
AZY07342.1\|1098281_1099178_+	inositol monophosphatase	NA	NA	NA	NA
AZY07343.1\|1099066_1099312_+	hypothetical protein	NA	NA	NA	NA
AZY07344.1\|1099298_1100249_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1130635 : 1201605

uncultured_Mediterranean_phage(25.0%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07373.1\|1130635_1131586_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07374.1\|1131642_1132755_+	malate dehydrogenase	NA	NA	NA	NA
AZY07375.1\|1135138_1136089_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07376.1\|1136679_1137456_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AZY07377.1\|1137573_1137837_-	30S ribosomal protein S20	NA	NA	NA	NA
AZY07378.1\|1137937_1138942_-	DUF4880 domain-containing protein	NA	NA	NA	NA
AZY07379.1\|1139142_1140744_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AZY07380.1\|1140769_1141528_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AZY07381.1\|1141619_1142276_-	adenylate kinase	NA	NA	NA	NA
AZY07382.1\|1142366_1143131_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AZY07383.1\|1143140_1143329_-	hypothetical protein	NA	NA	NA	NA
AZY07384.1\|1143384_1144428_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AZY07385.1\|1144424_1144838_-	biopolymer transporter ExbD	NA	NA	NA	NA
AZY07386.1\|1144834_1145455_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AZY07387.1\|1145735_1146686_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07388.1\|1146853_1148245_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AZY07389.1\|1148317_1148896_+	superoxide dismutase [Fe]	NA	NA	NA	NA
AZY07390.1\|1149012_1150410_+	chloride channel protein EriC	NA	NA	NA	NA
AZY07391.1\|1150525_1151731_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AZY07392.1\|1151830_1152349_-	hypothetical protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AZY07393.1\|1152443_1152689_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AZY07394.1\|1152916_1153231_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AZY07395.1\|1153320_1158510_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AZY09917.1\|1158506_1160675_+	penicillin-binding protein 1C	NA	NA	NA	NA
AZY07396.1\|1160694_1163046_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AZY07397.1\|1163050_1164370_+	paraquat-inducible membrane protein A	NA	NA	NA	NA
AZY07398.1\|1164388_1166062_+	MCE family protein	NA	NA	NA	NA
AZY07399.1\|1166066_1166735_+	lipoprotein	NA	NA	NA	NA
AZY07400.1\|1166891_1170713_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY07401.1\|1171043_1171994_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07402.1\|1172015_1173161_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07403.1\|1173309_1174239_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY07404.1\|1174235_1175324_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY07405.1\|1175320_1176124_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AZY07406.1\|1176120_1176852_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AZY07407.1\|1176909_1178199_-	MFS transporter	NA	NA	NA	NA
AZY07408.1\|1178295_1178898_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY07409.1\|1183450_1183789_-	transcriptional regulator	NA	NA	NA	NA
AZY07410.1\|1184457_1184763_+	hypothetical protein	NA	NA	NA	NA
AZY07411.1\|1186469_1187420_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07412.1\|1187416_1188748_-	MFS transporter	NA	NA	NA	NA
AZY07413.1\|1189987_1192009_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AZY07414.1\|1192001_1192643_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AZY07415.1\|1192639_1193047_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AZY07416.1\|1193043_1193844_+	SURF1 family protein	NA	NA	NA	NA
AZY07417.1\|1193918_1194623_+	oxidoreductase	NA	NA	NA	NA
AZY07418.1\|1194654_1195449_+	N-formylglutamate deformylase	NA	NA	NA	NA
AZY07419.1\|1195445_1196396_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07420.1\|1196494_1197445_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07421.1\|1197543_1197978_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AZY07422.1\|1198060_1200397_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AZY09918.1\|1200588_1201605_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA

DBSCAN-SWA_10

1301825 : 1359036

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07500.1\|1301825_1302776_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07501.1\|1306522_1307134_-	DUF2239 domain-containing protein	NA	NA	NA	NA
AZY07502.1\|1307356_1308817_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AZY07503.1\|1308913_1310506_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AZY07504.1\|1310492_1310771_+	hypothetical protein	NA	NA	NA	NA
AZY07505.1\|1310829_1311117_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZY07506.1\|1311118_1312459_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AZY07507.1\|1312554_1313244_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY07508.1\|1313256_1314687_+	MFS transporter	NA	NA	NA	NA
AZY07509.1\|1316411_1317233_+	IclR family transcriptional regulator	NA	NA	NA	NA
AZY07510.1\|1317243_1318815_+	amidohydrolase	NA	NA	NA	NA
AZY07511.1\|1318843_1319821_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07512.1\|1319847_1320651_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AZY07513.1\|1320647_1321442_+	ABC transporter permease	NA	NA	NA	NA
AZY07514.1\|1321449_1322685_+	DUF521 domain-containing protein	NA	NA	NA	NA
AZY07515.1\|1322677_1323112_+	DUF126 domain-containing protein	NA	NA	NA	NA
AZY07516.1\|1323861_1324812_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07517.1\|1325433_1327161_-	sodium-independent anion transporter	NA	NA	NA	NA
AZY07518.1\|1327272_1328631_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZY07519.1\|1328751_1328937_+	hypothetical protein	NA	NA	NA	NA
AZY07520.1\|1328923_1329874_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07521.1\|1329914_1330985_+	FUSC family protein	NA	NA	NA	NA
AZY09924.1\|1331007_1331886_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
AZY07522.1\|1332057_1333029_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY07523.1\|1333191_1334034_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07524.1\|1334195_1334876_+	anti-sigma factor	NA	NA	NA	NA
AZY07525.1\|1334869_1336039_+	amine oxidase	NA	NA	NA	NA
AZY07526.1\|1336035_1337067_+	alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.8e-26	27.8
AZY07527.1\|1337110_1338352_+	MFS transporter	NA	NA	NA	NA
AZY07528.1\|1338386_1339919_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY07529.1\|1339999_1340623_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AZY07530.1\|1340653_1341265_+	LysE family translocator	NA	NA	NA	NA
AZY07531.1\|1341300_1341771_+	DUF1801 domain-containing protein	NA	NA	NA	NA
AZY07532.1\|1342202_1343207_+	peptidase M20	NA	NA	NA	NA
AZY07533.1\|1343243_1344758_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07534.1\|1344761_1345721_+	ABC transporter permease	NA	NA	NA	NA
AZY07535.1\|1345749_1346553_+	ABC transporter permease	NA	NA	NA	NA
AZY07536.1\|1346554_1348189_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.9e-15	31.1
AZY07537.1\|1348272_1349334_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZY07538.1\|1349532_1349802_+	hypothetical protein	NA	NA	NA	NA
AZY07539.1\|1349805_1350330_+	DNA-binding protein	J9Q7G7	Salmonella_phage	6.5e-09	32.9
AZY07540.1\|1350745_1351696_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07541.1\|1351692_1352763_-	metal-dependent hydrolase	NA	NA	NA	NA
AZY07542.1\|1352835_1353474_+	DedA family protein	NA	NA	NA	NA
AZY07543.1\|1353768_1353996_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY07544.1\|1354118_1354832_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY07545.1\|1355076_1356027_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07546.1\|1356130_1356412_+	hypothetical protein	NA	NA	NA	NA
AZY07547.1\|1356526_1357975_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
AZY07548.1\|1358085_1359036_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1449269 : 1513485

Salmonella_phage(16.67%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07630.1\|1449269_1450220_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07631.1\|1450386_1450740_+	cytochrome C	NA	NA	NA	NA
AZY07632.1\|1450752_1451115_+	cytochrome	NA	NA	NA	NA
AZY07633.1\|1451156_1451582_-	DUF1841 domain-containing protein	NA	NA	NA	NA
AZY07634.1\|1451784_1453041_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-11	64.8
AZY07635.1\|1453239_1454220_+	hypothetical protein	NA	NA	NA	NA
AZY07636.1\|1454369_1455611_+	hypothetical protein	NA	NA	NA	NA
AZY07637.1\|1455709_1456660_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07638.1\|1456668_1457364_-	two-component system response regulator KdpE	NA	NA	NA	NA
AZY07639.1\|1460185_1460785_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
AZY07640.1\|1460795_1462961_-	K(+)-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.2e-24	27.1
AZY07641.1\|1462984_1464769_-	potassium-transporting ATPase A chain	NA	NA	NA	NA
AZY07642.1\|1464768_1464858_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
AZY07643.1\|1465552_1465825_+	DUF4212 domain-containing protein	NA	NA	NA	NA
AZY07644.1\|1465824_1467891_+	cation acetate symporter	NA	NA	NA	NA
AZY07645.1\|1467887_1468838_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07646.1\|1468936_1469887_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07647.1\|1470002_1470335_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AZY07648.1\|1470331_1471018_-	DNA mismatch repair protein MutS	NA	NA	NA	NA
AZY07649.1\|1471004_1471964_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.1e-57	40.2
AZY09932.1\|1472005_1474366_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	7.6e-81	48.0
AZY07650.1\|1474365_1474998_+	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AZY07651.1\|1475060_1476440_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.6e-75	38.9
AZY07652.1\|1476486_1477842_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-83	47.5
AZY07653.1\|1478120_1478369_+	hypothetical protein	NA	NA	NA	NA
AZY07654.1\|1478556_1478874_-	virulence factor	NA	NA	NA	NA
AZY07655.1\|1479146_1479662_-	hypothetical protein	T1SAR8	Salmonella_phage	5.1e-06	44.6
AZY07656.1\|1479755_1479917_+	hypothetical protein	NA	NA	NA	NA
AZY07657.1\|1479932_1480688_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZY07658.1\|1481026_1481233_+	hypothetical protein	NA	NA	NA	NA
AZY07659.1\|1481240_1481900_-	antibiotic resistance protein	NA	NA	NA	NA
AZY07660.1\|1482194_1484399_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AZY07661.1\|1484509_1485733_-	MFS transporter	S4TR35	Salmonella_phage	9.8e-24	29.4
AZY07662.1\|1485855_1486830_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZY07663.1\|1486897_1488091_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AZY07664.1\|1488105_1488906_-	siderophore ferric iron reductase	NA	NA	NA	NA
AZY07665.1\|1488902_1490759_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA
AZY07666.1\|1490755_1491361_-	N-acetyltransferase	NA	NA	NA	NA
AZY07667.1\|1491379_1492765_-	alcaligin biosynthesis enzyme	NA	NA	NA	NA
AZY07668.1\|1493490_1494717_+	transporter	NA	NA	NA	NA
AZY07669.1\|1494805_1495588_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
AZY07670.1\|1495686_1496637_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07671.1\|1496663_1497437_+	peroxide stress protein YaaA	NA	NA	NA	NA
AZY07672.1\|1497448_1498690_+	MFS transporter	NA	NA	NA	NA
AZY07673.1\|1500506_1501334_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
AZY07674.1\|1501335_1502046_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AZY07675.1\|1502042_1502642_-	septum formation inhibitor Maf	NA	NA	NA	NA
AZY09933.1\|1502750_1503344_+	DUF177 domain-containing protein	NA	NA	NA	NA
AZY07676.1\|1503395_1503578_+	50S ribosomal protein L32	NA	NA	NA	NA
AZY07677.1\|1503634_1504693_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
AZY07678.1\|1504692_1505679_+	3-oxoacyl-ACP synthase III	NA	NA	NA	NA
AZY07679.1\|1505760_1506696_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA
AZY07680.1\|1506697_1507450_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	6.9e-12	31.3
AZY09934.1\|1507632_1507872_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	5.4e-11	46.6
AZY07681.1\|1508061_1509291_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA
AZY07682.1\|1509292_1509793_+	hypothetical protein	NA	NA	NA	NA
AZY07683.1\|1509789_1510389_+	RNA polymerase sigma factor RpoE	A0A0F6TH34	Sinorhizobium_phage	2.2e-05	26.1
AZY07684.1\|1510401_1510902_+	hypothetical protein	NA	NA	NA	NA
AZY07685.1\|1510898_1511960_+	siderophore-interacting protein	NA	NA	NA	NA
AZY07686.1\|1511997_1513485_+\|protease	serine protease	W5SAB9	Pithovirus	1.2e-07	31.5

DBSCAN-SWA_12

1743220 : 1791235

Moraxella_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07876.1\|1743220_1744171_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07877.1\|1744269_1746870_-	DUF3394 domain-containing protein	NA	NA	NA	NA
AZY07878.1\|1746976_1747981_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY07879.1\|1748089_1749430_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	8.8e-18	22.8
AZY07880.1\|1749470_1750499_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AZY07881.1\|1750694_1751240_+	MarR family transcriptional regulator	NA	NA	NA	NA
AZY07882.1\|1751236_1751797_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA
AZY07883.1\|1751895_1752846_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07884.1\|1752883_1753471_+	DUF1949 domain-containing protein	A0A1X9I5T8	Streptococcus_phage	4.7e-16	35.8
AZY07885.1\|1753488_1753872_-	thioredoxin	V9SJ74	Achromobacter_phage	8.1e-09	25.8
AZY07886.1\|1755231_1756524_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.7e-66	36.0
AZY07887.1\|1756658_1757699_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.1e-91	51.3
AZY09943.1\|1757796_1758813_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY07888.1\|1759080_1759728_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AZY07889.1\|1759853_1760612_+	5'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.2
AZY09944.1\|1760686_1761376_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.2e-32	46.9
AZY07890.1\|1761393_1762278_+	peptidase	A0A292GJG6	Xanthomonas_phage	4.6e-15	49.5
AZY07891.1\|1762274_1763054_+	3'-5' exonuclease	NA	NA	NA	NA
AZY07892.1\|1763080_1763758_+	hypothetical protein	NA	NA	NA	NA
AZY09945.1\|1764046_1764799_+	hypothetical protein	NA	NA	NA	NA
AZY07893.1\|1764917_1766318_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-31	26.5
AZY07894.1\|1766341_1766740_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AZY07895.1\|1766915_1767116_+	copper chaperone	NA	NA	NA	NA
AZY07896.1\|1767254_1767983_+	glutaredoxin	A0A1D8KSL1	Synechococcus_phage	9.6e-43	56.8
AZY07897.1\|1768116_1769532_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
AZY07898.1\|1769535_1770399_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
AZY07899.1\|1770411_1771161_-	glycerophosphodiester phosphodiesterase	A0A2H4PGQ5	Escherichia_phage	1.5e-14	27.8
AZY07900.1\|1771343_1773359_+	peptidylprolyl isomerase	NA	NA	NA	NA
AZY09946.1\|1773340_1773889_-	arylesterase	NA	NA	NA	NA
AZY07901.1\|1773965_1774685_+	ABC transporter	G9BWD6	Planktothrix_phage	1.4e-22	36.6
AZY07902.1\|1774783_1775734_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07903.1\|1775832_1776783_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07904.1\|1776931_1777270_-	phospholipid-binding protein	NA	NA	NA	NA
AZY07905.1\|1777327_1777489_-	DUF1328 domain-containing protein	NA	NA	NA	NA
AZY07906.1\|1777520_1777721_-	CsbD family protein	NA	NA	NA	NA
AZY07907.1\|1777986_1780560_-	cyanophycin synthetase	NA	NA	NA	NA
AZY07908.1\|1780630_1783204_-	cyanophycin synthetase	NA	NA	NA	NA
AZY07909.1\|1785730_1786219_+	DUF1854 domain-containing protein	NA	NA	NA	NA
AZY07910.1\|1786310_1787462_-	N-acetyltransferase	NA	NA	NA	NA
AZY07911.1\|1787515_1788337_+	DUF455 domain-containing protein	NA	NA	NA	NA
AZY07912.1\|1788375_1789605_+	lytic murein transglycosylase	NA	NA	NA	NA
AZY07913.1\|1789733_1790174_+	DUF937 domain-containing protein	NA	NA	NA	NA
AZY07914.1\|1790118_1790298_+	hypothetical protein	NA	NA	NA	NA
AZY07915.1\|1790284_1791235_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1794628 : 1855833

Lake_Baikal_phage(21.43%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07920.1\|1794628_1797490_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AZY07921.1\|1797479_1798445_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AZY07922.1\|1798504_1800499_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AZY07923.1\|1800597_1801548_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07924.1\|1801544_1801919_-	hypothetical protein	NA	NA	NA	NA
AZY07925.1\|1802180_1803389_+	acyl-CoA desaturase	NA	NA	NA	NA
AZY07926.1\|1803385_1805686_+	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AZY07927.1\|1805738_1808351_-	TonB-dependent receptor	NA	NA	NA	NA
AZY07928.1\|1808710_1810636_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AZY07929.1\|1810632_1811529_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AZY07930.1\|1811535_1812675_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AZY07931.1\|1812674_1813496_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AZY07932.1\|1815066_1815396_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AZY07933.1\|1815778_1817035_+	autotransporter Phg	NA	NA	NA	NA
AZY07934.1\|1817109_1817391_+	hypothetical protein	NA	NA	NA	NA
AZY07935.1\|1817432_1817753_+	hypothetical protein	NA	NA	NA	NA
AZY07936.1\|1818059_1818263_+	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AZY07937.1\|1818346_1818913_+	DUF924 domain-containing protein	NA	NA	NA	NA
AZY07938.1\|1819258_1819459_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AZY07939.1\|1819570_1820149_-	TIGR00645 family protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AZY07940.1\|1820327_1821638_+	trigger factor	NA	NA	NA	NA
AZY07941.1\|1821640_1822294_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AZY07942.1\|1822398_1823703_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AZY07943.1\|1823891_1826345_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AZY07944.1\|1826468_1827419_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY07945.1\|1827646_1828870_+	CoA transferase	NA	NA	NA	NA
AZY07946.1\|1828935_1829907_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY07947.1\|1829919_1830375_+	MaoC family dehydratase	NA	NA	NA	NA
AZY07948.1\|1830388_1831192_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AZY07949.1\|1831188_1831620_+	hypothetical protein	NA	NA	NA	NA
AZY07950.1\|1831616_1832774_+	thiolase	NA	NA	NA	NA
AZY07951.1\|1832795_1833572_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
AZY07952.1\|1835736_1836453_+	3-oxoadipate CoA-transferase	NA	NA	NA	NA
AZY07953.1\|1836445_1837087_+	CoA transferase subunit B	NA	NA	NA	NA
AZY07954.1\|1837121_1837853_+	hypothetical protein	NA	NA	NA	NA
AZY07955.1\|1837870_1838083_+	hypothetical protein	NA	NA	NA	NA
AZY07956.1\|1838653_1839604_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07957.1\|1841161_1841890_-	transcriptional repressor LexA	A0A2H4JG58	uncultured_Caudovirales_phage	2.8e-10	50.7
AZY07958.1\|1841940_1843143_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AZY07959.1\|1843220_1845257_+	UvrABC system protein B	NA	NA	NA	NA
AZY07960.1\|1845509_1846001_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
AZY07961.1\|1846216_1846729_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
AZY07962.1\|1846746_1847958_+	IscS subfamily cysteine desulfurase	NA	NA	NA	NA
AZY07963.1\|1847995_1848406_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	7.5e-53	79.0
AZY07964.1\|1848407_1848731_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	6.8e-25	52.8
AZY07965.1\|1848733_1849246_+	co-chaperone protein HscB	NA	NA	NA	NA
AZY07966.1\|1849375_1851238_+	chaperone protein HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.0e-101	42.4
AZY07967.1\|1851247_1851589_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
AZY07968.1\|1851588_1851783_+	Fe-S assembly protein IscX	NA	NA	NA	NA
AZY07969.1\|1851907_1852801_+	methylglyoxal synthase	NA	NA	NA	NA
AZY07970.1\|1852797_1853748_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY07971.1\|1853872_1854682_-	enoyl-CoA hydratase	NA	NA	NA	NA
AZY07972.1\|1854882_1855833_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

1883616 : 1924307

Klosneuvirus(25.0%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY07992.1\|1883616_1886241_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AZY07993.1\|1886227_1886482_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AZY07994.1\|1886548_1887130_-	hypothetical protein	NA	NA	NA	NA
AZY07995.1\|1887433_1887694_+	30S ribosomal protein S16	NA	NA	NA	NA
AZY07996.1\|1887859_1888483_+	ribosome maturation factor RimM	NA	NA	NA	NA
AZY07997.1\|1888482_1889256_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AZY07998.1\|1889252_1890461_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AZY07999.1\|1890486_1890960_-	RidA family protein	NA	NA	NA	NA
AZY08000.1\|1891033_1891984_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08001.1\|1892082_1893033_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08002.1\|1893131_1894481_-	two-component sensor histidine kinase	NA	NA	NA	NA
AZY08003.1\|1895246_1896002_+	MipA/OmpV family protein	NA	NA	NA	NA
AZY08004.1\|1896094_1898977_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AZY08005.1\|1899299_1899725_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AZY08006.1\|1899752_1900901_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AZY08007.1\|1900897_1901404_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY08008.1\|1901410_1902706_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AZY08009.1\|1902746_1904051_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AZY08010.1\|1904052_1904691_+	hypothetical protein	NA	NA	NA	NA
AZY08011.1\|1904693_1905854_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AZY08012.1\|1905880_1907236_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AZY08013.1\|1907239_1908310_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AZY08014.1\|1908448_1908685_+	RNA-binding protein Hfq	NA	NA	NA	NA
AZY08015.1\|1908772_1909879_+	GTPase HflX	NA	NA	NA	NA
AZY08016.1\|1909844_1911149_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AZY08017.1\|1911167_1912067_+\|protease	protease modulator HflC	NA	NA	NA	NA
AZY08018.1\|1912250_1913408_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
AZY08019.1\|1913472_1914780_+	adenylosuccinate synthetase	A0A160ER07	Powai_lake_megavirus	3.0e-63	33.5
AZY08020.1\|1914893_1915433_+	phosphoribosyltransferase	NA	NA	NA	NA
AZY08021.1\|1915710_1915923_+	30S ribosomal protein S21	NA	NA	NA	NA
AZY08022.1\|1915942_1917973_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.0e-65	41.9
AZY09948.1\|1918772_1920941_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.1e-36	30.1
AZY08023.1\|1921350_1921650_-	hypothetical protein	NA	NA	NA	NA
AZY08024.1\|1921934_1922348_+	transcriptional regulator	A0A222YXG1	Escherichia_phage	3.8e-36	59.0
AZY08025.1\|1922307_1923258_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08026.1\|1923356_1924307_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1935511 : 1996305

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08040.1\|1935511_1936462_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08041.1\|1936458_1937733_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AZY08042.1\|1937830_1939030_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AZY08043.1\|1939026_1939680_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY08044.1\|1939676_1941113_+	dethiobiotin synthase	NA	NA	NA	NA
AZY08045.1\|1941100_1941460_+	CidA/LrgA family protein	NA	NA	NA	NA
AZY08046.1\|1943379_1945245_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AZY09950.1\|1945502_1947023_+	aldehyde dehydrogenase	NA	NA	NA	NA
AZY08047.1\|1947110_1947761_-	flavodoxin family protein	NA	NA	NA	NA
AZY08048.1\|1948709_1950005_+	DUF445 domain-containing protein	NA	NA	NA	NA
AZY08049.1\|1950026_1950911_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY09951.1\|1951009_1951885_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AZY08050.1\|1951874_1952231_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AZY08051.1\|1952304_1953336_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY08052.1\|1953465_1953645_-	DUF3008 domain-containing protein	NA	NA	NA	NA
AZY08053.1\|1953742_1954267_+	DUF302 domain-containing protein	NA	NA	NA	NA
AZY08054.1\|1954277_1955114_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY08055.1\|1955226_1955598_+	transcriptional regulator	NA	NA	NA	NA
AZY08056.1\|1955594_1956146_+	ATPase	NA	NA	NA	NA
AZY08057.1\|1956161_1957853_-	sodium-independent anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AZY08058.1\|1957901_1958582_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY08059.1\|1958829_1959294_-	hypothetical protein	NA	NA	NA	NA
AZY08060.1\|1959463_1960393_+	ZIP family metal transporter	NA	NA	NA	NA
AZY08061.1\|1960405_1961053_-	hypothetical protein	NA	NA	NA	NA
AZY08062.1\|1961126_1962944_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AZY08063.1\|1963027_1963978_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08064.1\|1964630_1965581_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08065.1\|1965599_1965947_-	GFA family protein	NA	NA	NA	NA
AZY08066.1\|1965975_1967415_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.4e-55	37.4
AZY08067.1\|1967433_1967829_-	VOC family protein	NA	NA	NA	NA
AZY08068.1\|1968003_1968612_+	peptidase S16	NA	NA	NA	NA
AZY08069.1\|1968624_1969443_+	hypothetical protein	A0A1B1INV8	uncultured_Mediterranean_phage	2.3e-16	28.8
AZY08070.1\|1969394_1970369_-	AraC family transcriptional regulator	NA	NA	NA	NA
AZY08071.1\|1970397_1971459_-	hypothetical protein	NA	NA	NA	NA
AZY08072.1\|1971455_1973672_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA
AZY08073.1\|1973685_1974144_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
AZY08074.1\|1974301_1974646_-	hypothetical protein	NA	NA	NA	NA
AZY08075.1\|1974802_1975708_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY09952.1\|1975794_1976808_+	flavin-nucleotide-binding protein	NA	NA	NA	NA
AZY09953.1\|1978787_1979804_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY08076.1\|1979946_1981299_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	2.9e-45	27.6
AZY08077.1\|1981473_1981770_+	hypothetical protein	NA	NA	NA	NA
AZY08078.1\|1982907_1983858_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08079.1\|1984343_1984520_-	hypothetical protein	NA	NA	NA	NA
AZY08080.1\|1984491_1985130_+	hypothetical protein	NA	NA	NA	NA
AZY08081.1\|1985204_1986176_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08082.1\|1986179_1987034_+	polysaccharide deacetylase	NA	NA	NA	NA
AZY08083.1\|1987052_1987874_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY08084.1\|1987905_1988700_+	amidase	NA	NA	NA	NA
AZY08085.1\|1988748_1989354_+	hypothetical protein	NA	NA	NA	NA
AZY09954.1\|1989350_1990145_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY08086.1\|1990430_1991936_-	microcystin degradation protein MlrC	NA	NA	NA	NA
AZY08087.1\|1991977_1992760_-	exodeoxyribonuclease III	NA	NA	NA	NA
AZY08088.1\|1992829_1993276_-	hypothetical protein	NA	NA	NA	NA
AZY08089.1\|1993272_1994499_-	NnrS family protein	NA	NA	NA	NA
AZY08090.1\|1994491_1994896_-	preprotein translocase subunit TatC	NA	NA	NA	NA
AZY08091.1\|1995055_1995358_+	SelT/SelW/SelH family protein	NA	NA	NA	NA
AZY08092.1\|1995354_1996305_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2246191 : 2307539

Yellowstone_lake_phycodnavirus(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08278.1\|2246191_2247142_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08279.1\|2247258_2247978_+	FadR family transcriptional regulator	NA	NA	NA	NA
AZY08280.1\|2248150_2249137_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08281.1\|2249137_2249620_+	TRAP transporter small permease	NA	NA	NA	NA
AZY08282.1\|2249623_2250907_+	TRAP transporter large permease	NA	NA	NA	NA
AZY08283.1\|2250903_2251842_+	CoA ester lyase	NA	NA	NA	NA
AZY08284.1\|2251838_2253548_+	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AZY08285.1\|2253557_2254805_+	Zn-dependent hydrolase	NA	NA	NA	NA
AZY09965.1\|2256415_2257705_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AZY08286.1\|2258842_2259616_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AZY08287.1\|2260277_2261021_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08288.1\|2261095_2261836_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY08289.1\|2262031_2262868_-	hypothetical protein	NA	NA	NA	NA
AZY08290.1\|2262918_2263689_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AZY08291.1\|2263738_2264791_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
AZY08292.1\|2264787_2265414_-	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AZY08293.1\|2265410_2266457_-	endolytic transglycosylase MltG	NA	NA	NA	NA
AZY08294.1\|2266623_2267640_+	folate-binding protein	NA	NA	NA	NA
AZY09966.1\|2267738_2268689_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08295.1\|2271429_2272719_-	D-amino acid dehydrogenase	NA	NA	NA	NA
AZY08296.1\|2272837_2273308_-	DNA-binding protein	NA	NA	NA	NA
AZY08297.1\|2273318_2274527_-	flavohemoprotein	NA	NA	NA	NA
AZY08298.1\|2274673_2275138_+	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	3.9e-05	32.4
AZY08299.1\|2275161_2276112_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08300.1\|2277096_2277870_-	ABC transporter permease	NA	NA	NA	NA
AZY08301.1\|2277866_2278865_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08302.1\|2278949_2279726_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AZY08303.1\|2279881_2281549_-	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.6e-53	28.9
AZY08304.1\|2281866_2282991_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08305.1\|2283117_2283741_+	hypothetical protein	NA	NA	NA	NA
AZY08306.1\|2283737_2285639_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY08307.1\|2285687_2286482_+	enoyl-CoA hydratase	NA	NA	NA	NA
AZY08308.1\|2286494_2287496_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
AZY08309.1\|2287492_2287999_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
AZY08310.1\|2287991_2288840_-	hydrolase	NA	NA	NA	NA
AZY08311.1\|2288937_2289480_-	hypothetical protein	NA	NA	NA	NA
AZY08312.1\|2289523_2290474_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08313.1\|2290629_2290956_-	cation:proton antiporter	NA	NA	NA	NA
AZY08314.1\|2290952_2291237_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
AZY08315.1\|2291233_2291713_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AZY08316.1\|2291709_2293338_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AZY08317.1\|2293334_2293679_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AZY08318.1\|2293678_2296612_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AZY08319.1\|2297770_2298721_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08320.1\|2298819_2299116_-	hypothetical protein	NA	NA	NA	NA
AZY08321.1\|2299222_2300140_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08322.1\|2300144_2300858_-	NAD-dependent oxidoreductase	NA	NA	NA	NA
AZY08323.1\|2300871_2301843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08324.1\|2303562_2303943_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AZY08325.1\|2303946_2305134_+	MFS transporter	NA	NA	NA	NA
AZY09967.1\|2305572_2306295_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AZY08326.1\|2306588_2307539_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2328330 : 2399484

Tetraselmis_virus(10.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08341.1\|2328330_2329281_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08342.1\|2329833_2331459_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AZY09972.1\|2331508_2332543_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AZY08343.1\|2332545_2333892_-	hypothetical protein	NA	NA	NA	NA
AZY09973.1\|2333888_2335403_-	VWA domain-containing protein	NA	NA	NA	NA
AZY08344.1\|2335393_2336404_-	hypothetical protein	NA	NA	NA	NA
AZY08345.1\|2336877_2337819_-	DUF58 domain-containing protein	NA	NA	NA	NA
AZY08346.1\|2337827_2338796_-	AAA family ATPase	NA	NA	NA	NA
AZY08347.1\|2340335_2341304_+	transporter	NA	NA	NA	NA
AZY08348.1\|2341481_2342471_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08349.1\|2342517_2343276_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY08350.1\|2343465_2344203_+	hypothetical protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AZY08351.1\|2344301_2345252_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08352.1\|2345436_2346219_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.0e-09	25.8
AZY08353.1\|2346212_2346914_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY08354.1\|2347153_2347756_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY08355.1\|2349082_2350033_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08356.1\|2350029_2351586_-	LTA synthase family protein	NA	NA	NA	NA
AZY08357.1\|2351578_2352352_-	oxidoreductase	NA	NA	NA	NA
AZY08358.1\|2352410_2353361_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08359.1\|2353442_2354618_-	capsule biosynthesis protein CapA	NA	NA	NA	NA
AZY08360.1\|2354631_2356689_-	capsular polysaccharide export protein	NA	NA	NA	NA
AZY08361.1\|2356685_2357711_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	4.7e-72	44.2
AZY08362.1\|2357722_2359012_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA
AZY08363.1\|2359034_2360132_-	capsular polysaccharide export protein	NA	NA	NA	NA
AZY08364.1\|2360128_2361019_-	capsular biosynthesis protein	NA	NA	NA	NA
AZY08365.1\|2361015_2363100_-	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA
AZY08366.1\|2363131_2364301_-	capsule biosynthesis protein	NA	NA	NA	NA
AZY08367.1\|2364342_2365083_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AZY08368.1\|2365082_2365853_-	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA
AZY08369.1\|2366708_2367494_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.1e-12	32.0
AZY08370.1\|2367520_2369605_+	hypothetical protein	NA	NA	NA	NA
AZY08371.1\|2369772_2371728_+	capsular biosynthesis protein	NA	NA	NA	NA
AZY09974.1\|2372051_2372552_-	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.4e-14	35.5
AZY08372.1\|2372650_2374177_-	methylmalonate-semialdehyde dehydrogenase (CoA acylating)	NA	NA	NA	NA
AZY09975.1\|2374314_2375202_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08373.1\|2375216_2376170_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.2e-14	26.5
AZY08374.1\|2376221_2378312_-	DNA helicase RecG	NA	NA	NA	NA
AZY08375.1\|2378327_2378714_-	reactive intermediate/imine deaminase	NA	NA	NA	NA
AZY08376.1\|2381407_2382211_-	2,5-didehydrogluconate reductase DkgB	A0A2H4PQR8	Staphylococcus_phage	2.0e-33	32.4
AZY08377.1\|2383504_2384407_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08378.1\|2384471_2385248_-	ferredoxin--NADP reductase	NA	NA	NA	NA
AZY08379.1\|2385569_2386619_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08380.1\|2386742_2388413_+	iron ABC transporter permease	NA	NA	NA	NA
AZY08381.1\|2388417_2389212_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-16	29.4
AZY08382.1\|2389310_2390261_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08383.1\|2390280_2391186_-	pirin family protein	NA	NA	NA	NA
AZY08384.1\|2391263_2391962_-	pirin family protein	NA	NA	NA	NA
AZY08385.1\|2392121_2393066_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08386.1\|2393075_2394566_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AZY08387.1\|2394562_2395630_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AZY08388.1\|2395693_2397106_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AZY08389.1\|2397291_2398512_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
AZY08390.1\|2398533_2399484_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2419837 : 2458444

Indivirus(25.0%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08412.1\|2419837_2420788_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08413.1\|2421680_2422586_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AZY08414.1\|2422597_2423725_+	lipoprotein	NA	NA	NA	NA
AZY08415.1\|2423813_2424428_-	fimbrial protein	NA	NA	NA	NA
AZY08416.1\|2425085_2426273_-	cupin	NA	NA	NA	NA
AZY09976.1\|2426269_2428867_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
AZY08417.1\|2429121_2429337_+	dodecin domain-containing protein	NA	NA	NA	NA
AZY08418.1\|2429792_2430347_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
AZY08419.1\|2430614_2431175_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AZY08420.1\|2431286_2432591_+	peptidase	NA	NA	NA	NA
AZY08421.1\|2432599_2433550_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09977.1\|2433633_2435148_+	thiol oxidoreductase	NA	NA	NA	NA
AZY08422.1\|2435253_2436255_+	aminopeptidase	NA	NA	NA	NA
AZY08423.1\|2436235_2437357_+	DUF1513 domain-containing protein	NA	NA	NA	NA
AZY08424.1\|2437280_2437469_+	hypothetical protein	NA	NA	NA	NA
AZY08425.1\|2437455_2438406_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08426.1\|2438402_2439029_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AZY09978.1\|2439094_2439940_+	hypothetical protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
AZY08427.1\|2440043_2440643_+	hypothetical protein	NA	NA	NA	NA
AZY08428.1\|2440639_2441404_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AZY08429.1\|2441473_2442424_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08430.1\|2442522_2443131_-	recombination protein RecR	NA	NA	NA	NA
AZY08431.1\|2443181_2443508_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AZY08432.1\|2443554_2445780_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.2e-43	38.5
AZY08433.1\|2446447_2449852_-	nuclease	NA	NA	NA	NA
AZY08434.1\|2449864_2452525_-	hypothetical protein	NA	NA	NA	NA
AZY08435.1\|2452728_2453931_-	MFS transporter	NA	NA	NA	NA
AZY08436.1\|2454617_2455730_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA
AZY08437.1\|2455736_2456687_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08438.1\|2456785_2457187_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AZY08439.1\|2457259_2457838_-\|protease	protease	NA	NA	NA	NA
AZY09979.1\|2457955_2458444_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA

DBSCAN-SWA_19

2496360 : 2555141

Planktothrix_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08482.1\|2496360_2498310_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
AZY08483.1\|2498697_2499474_+	DNA-binding response regulator	NA	NA	NA	NA
AZY08484.1\|2499479_2499872_+	hypothetical protein	NA	NA	NA	NA
AZY08485.1\|2500293_2501244_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08486.1\|2501240_2502338_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AZY08487.1\|2502369_2503320_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08488.1\|2505101_2506343_-	MFS transporter	NA	NA	NA	NA
AZY08489.1\|2506354_2507128_-	peroxide stress protein YaaA	NA	NA	NA	NA
AZY08490.1\|2507154_2508105_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08491.1\|2508584_2509241_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
AZY08492.1\|2509255_2510923_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AZY08493.1\|2510925_2511555_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08494.1\|2511766_2512861_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08495.1\|2513005_2513818_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AZY08496.1\|2513821_2515525_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
AZY08497.1\|2515575_2516706_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY08498.1\|2516892_2517969_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AZY09980.1\|2518050_2518701_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZY08499.1\|2518715_2520149_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AZY08500.1\|2520402_2521221_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08501.1\|2521217_2521922_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
AZY08502.1\|2522821_2523937_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08503.1\|2523970_2524345_-	hypothetical protein	NA	NA	NA	NA
AZY08504.1\|2524367_2525525_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AZY08505.1\|2525537_2525771_-	lipoprotein	NA	NA	NA	NA
AZY08506.1\|2526405_2529375_-	formate dehydrogenase	NA	NA	NA	NA
AZY08507.1\|2529389_2529599_-	formate dehydrogenase	NA	NA	NA	NA
AZY08508.1\|2529750_2530380_-	hypothetical protein	NA	NA	NA	NA
AZY08509.1\|2530376_2532494_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AZY08510.1\|2532490_2533171_-	DUF3306 domain-containing protein	NA	NA	NA	NA
AZY08511.1\|2533167_2533728_-	DUF3305 domain-containing protein	NA	NA	NA	NA
AZY08512.1\|2533734_2534832_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AZY08513.1\|2534969_2535578_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AZY08514.1\|2535574_2536867_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AZY08515.1\|2536880_2537423_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AZY08516.1\|2537432_2538269_-	M48 family peptidase	NA	NA	NA	NA
AZY08517.1\|2538302_2539364_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
AZY08518.1\|2539405_2540458_-	GGDEF domain-containing protein	NA	NA	NA	NA
AZY08519.1\|2540473_2540776_-	hypothetical protein	NA	NA	NA	NA
AZY08520.1\|2540917_2541868_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08521.1\|2542046_2543741_+	iron ABC transporter permease	NA	NA	NA	NA
AZY08522.1\|2543737_2544823_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AZY08523.1\|2544870_2545770_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08524.1\|2545780_2546425_+	histidine phosphatase family protein	NA	NA	NA	NA
AZY08525.1\|2547446_2550689_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AZY08526.1\|2550699_2551797_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.3e-53	35.2
AZY08527.1\|2552059_2553043_+	transaldolase	H6WFR1	Cyanophage	5.9e-11	29.2
AZY08528.1\|2553141_2554092_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08529.1\|2554190_2555141_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2607678 : 2674178

uncultured_Caudovirales_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08580.1\|2607678_2608629_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08581.1\|2608998_2609571_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AZY08582.1\|2609573_2610584_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AZY08583.1\|2610576_2611077_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AZY08584.1\|2611087_2611429_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
AZY08585.1\|2611440_2612232_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AZY08586.1\|2612248_2612518_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AZY08587.1\|2612540_2613329_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AZY09984.1\|2613375_2614392_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY08588.1\|2614608_2616051_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AZY08589.1\|2616229_2617849_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-08	45.3
AZY08590.1\|2617969_2619790_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-11	52.6
AZY08591.1\|2619868_2621401_-	flagellar hook-associated protein 3	NA	NA	NA	NA
AZY08592.1\|2621434_2623081_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA
AZY08593.1\|2623150_2624173_-	flagellar assembly peptidoglycan hydrolase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AZY08594.1\|2624190_2625324_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA
AZY08595.1\|2625326_2626016_-	flagellar L-ring protein	NA	NA	NA	NA
AZY08596.1\|2626015_2626801_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AZY08597.1\|2626844_2627609_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA
AZY08598.1\|2627647_2629069_-	flagellar hook protein FlgE	NA	NA	NA	NA
AZY08599.1\|2629134_2629839_-	flagellar basal body rod modification protein	NA	NA	NA	NA
AZY08600.1\|2629886_2630306_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
AZY08601.1\|2630318_2630726_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AZY09985.1\|2630909_2631620_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
AZY08602.1\|2631746_2632037_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AZY08603.1\|2632054_2632537_+	flagellar protein FlgN	NA	NA	NA	NA
AZY08604.1\|2637042_2638197_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
AZY09986.1\|2638502_2639519_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY08605.1\|2639765_2640554_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08606.1\|2640620_2641301_+	amino acid ABC transporter permease	NA	NA	NA	NA
AZY08607.1\|2641297_2642068_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AZY08608.1\|2642166_2643117_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08609.1\|2643172_2644090_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AZY08610.1\|2644100_2645279_-	mandelate racemase	NA	NA	NA	NA
AZY08611.1\|2645298_2646294_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08612.1\|2647882_2648491_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AZY08613.1\|2648478_2649519_+	LacI family transcriptional regulator	NA	NA	NA	NA
AZY08614.1\|2649536_2650499_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08615.1\|2650495_2651689_-	CoA transferase	NA	NA	NA	NA
AZY08616.1\|2651685_2652483_-	citryl-CoA lyase	NA	NA	NA	NA
AZY08617.1\|2652508_2653495_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08618.1\|2653513_2655553_-	acetyl-CoA synthetase	NA	NA	NA	NA
AZY09987.1\|2655754_2656435_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY08619.1\|2656448_2657360_-	CoA ester lyase	NA	NA	NA	NA
AZY08620.1\|2657356_2657935_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AZY08621.1\|2658073_2658979_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08622.1\|2658986_2662406_+	nuclease	NA	NA	NA	NA
AZY08623.1\|2662393_2664994_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA
AZY08624.1\|2665949_2666582_-	PadR family transcriptional regulator	NA	NA	NA	NA
AZY08625.1\|2666975_2667734_+	hypothetical protein	NA	NA	NA	NA
AZY08626.1\|2667730_2668933_+	cardiolipin synthase ClsB	NA	NA	NA	NA
AZY08627.1\|2669120_2670071_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08628.1\|2670978_2672124_+	DUF3182 domain-containing protein	NA	NA	NA	NA
AZY09988.1\|2672143_2672866_+	alpha/beta hydrolase	NA	NA	NA	NA
AZY08629.1\|2672982_2673162_+	hypothetical protein	NA	NA	NA	NA
AZY08630.1\|2673227_2674178_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2878290 : 2959568

Planktothrix_phage(16.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08793.1\|2878290_2879241_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08794.1\|2879237_2880140_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08795.1\|2880227_2880986_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY08796.1\|2880998_2882147_-	cell division protein ZapE	NA	NA	NA	NA
AZY08797.1\|2882187_2883615_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AZY08798.1\|2883844_2885059_-	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AZY08799.1\|2885104_2887975_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AZY08800.1\|2890385_2890874_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY08801.1\|2890999_2893696_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
AZY08802.1\|2893850_2896133_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AZY08803.1\|2896298_2896931_+	fimbrial protein	NA	NA	NA	NA
AZY08804.1\|2897029_2897980_+\|transposase	IS481 family transposase IS481v2	NA	NA	NA	NA
AZY08805.1\|2898026_2898581_-	transcription elongation factor GreB	NA	NA	NA	NA
AZY08806.1\|2898648_2899494_-	PHP domain-containing protein	NA	NA	NA	NA
AZY08807.1\|2899563_2900532_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY08808.1\|2900531_2902328_-	hypothetical protein	NA	NA	NA	NA
AZY08809.1\|2904227_2908154_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA
AZY08810.1\|2908444_2908621_-	hypothetical protein	NA	NA	NA	NA
AZY08811.1\|2908889_2912120_-	autotransporter SphB3	NA	NA	NA	NA
AZY08812.1\|2912401_2913229_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AZY08813.1\|2913262_2913958_-	lipoprotein-releasing system ATP-binding protein LolD	G9BWD6	Planktothrix_phage	7.0e-35	38.6
AZY08814.1\|2913950_2915231_-	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA
AZY08815.1\|2915240_2916218_+	hypothetical protein	NA	NA	NA	NA
AZY10005.1\|2916199_2917900_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.3e-50	28.3
AZY08816.1\|2918002_2919106_+	peptide chain release factor 2	NA	NA	NA	NA
AZY08817.1\|2919136_2919892_+	short-chain dehydrogenase	NA	NA	NA	NA
AZY08818.1\|2919898_2921419_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
AZY08819.1\|2921461_2921764_+	hypothetical protein	NA	NA	NA	NA
AZY08820.1\|2921760_2922393_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AZY08821.1\|2922471_2924337_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
AZY08822.1\|2924333_2925149_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
AZY08823.1\|2925156_2926272_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08824.1\|2927176_2928055_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY08825.1\|2928054_2928879_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
AZY08826.1\|2929046_2929997_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08827.1\|2930179_2933059_+	diguanylate phosphodiesterase	NA	NA	NA	NA
AZY08828.1\|2933040_2933817_-	DNA-binding response regulator	NA	NA	NA	NA
AZY08829.1\|2933909_2935373_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AZY08830.1\|2935369_2935741_-	DUF2069 domain-containing protein	NA	NA	NA	NA
AZY08831.1\|2935758_2937072_+	hypothetical protein	NA	NA	NA	NA
AZY08832.1\|2937108_2937567_+	CBS domain-containing protein	NA	NA	NA	NA
AZY08833.1\|2937679_2938630_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08834.1\|2938626_2939640_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AZY08835.1\|2939779_2940766_+	homoserine kinase	NA	NA	NA	NA
AZY08836.1\|2940809_2941610_+	hypothetical protein	NA	NA	NA	NA
AZY08837.1\|2942412_2943363_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08838.1\|2943514_2944117_-	hypothetical protein	NA	NA	NA	NA
AZY08839.1\|2944135_2944768_+	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA
AZY08840.1\|2945005_2946892_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AZY08841.1\|2946910_2947753_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AZY08842.1\|2947749_2949108_+	phosphoglucosamine mutase	NA	NA	NA	NA
AZY08843.1\|2949328_2950123_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AZY08844.1\|2950353_2951847_-	exopolyphosphatase	NA	NA	NA	NA
AZY08845.1\|2952082_2954164_+	polyphosphate kinase 1	NA	NA	NA	NA
AZY08846.1\|2954358_2955399_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AZY08847.1\|2955533_2956550_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AZY08848.1\|2956571_2957429_+	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA
AZY10006.1\|2957473_2958250_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AZY08849.1\|2958617_2959568_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2968636 : 3017574

uncultured_Mediterranean_phage(37.5%)

holin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08857.1\|2968636_2969050_-\|holin	phage holin family protein	NA	NA	NA	NA
AZY08858.1\|2969090_2969408_-	DUF883 domain-containing protein	NA	NA	NA	NA
AZY08859.1\|2969492_2970209_-	hypothetical protein	NA	NA	NA	NA
AZY10007.1\|2970472_2971894_+	siroheme synthase	NA	NA	NA	NA
AZY08860.1\|2971960_2974708_-	pertactin autotransporter	NA	NA	NA	NA
AZY10008.1\|2975040_2976057_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY10009.1\|2976392_2977034_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AZY08861.1\|2977124_2978561_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AZY08862.1\|2978718_2979792_+\|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	NA	NA	NA	NA
AZY08863.1\|2979788_2980925_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-85	44.4
AZY08864.1\|2981069_2981414_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.0e-10	40.4
AZY08865.1\|2981480_2983361_+	protein translocase subunit SecD	NA	NA	NA	NA
AZY08866.1\|2983410_2984346_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-41	35.5
AZY10010.1\|2984678_2985695_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY08867.1\|2986632_2988060_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AZY08868.1\|2988056_2989079_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AZY08869.1\|2989068_2989542_+	endoribonuclease YbeY	NA	NA	NA	NA
AZY08870.1\|2989667_2990570_+	magnesium/cobalt efflux protein	NA	NA	NA	NA
AZY08871.1\|2990566_2992210_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AZY10011.1\|2992206_2993214_-	aldo/keto reductase	NA	NA	NA	NA
AZY10012.1\|2994044_2995061_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AZY08872.1\|2995160_2995793_-	protein phosphatase CheZ	NA	NA	NA	NA
AZY08873.1\|2995801_2996191_-	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AZY08874.1\|2996243_2997296_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AZY08875.1\|2998159_2999866_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AZY08876.1\|2999939_3000440_-	chemotaxis protein CheW	NA	NA	NA	NA
AZY08877.1\|3000454_3002512_-	chemotaxis protein CheA	NA	NA	NA	NA
AZY08878.1\|3002538_3002832_-	response regulator	NA	NA	NA	NA
AZY08879.1\|3002933_3003881_-	motility protein MotB	NA	NA	NA	NA
AZY08880.1\|3003893_3004769_-	flagellar motor stator protein MotA	NA	NA	NA	NA
AZY08881.1\|3004889_3005450_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AZY08882.1\|3005484_3005808_-	flagellar transcriptional activator FlhD	NA	NA	NA	NA
AZY08883.1\|3006243_3006981_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AZY08884.1\|3007279_3008230_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08885.1\|3008473_3008737_+	translation initiation factor IF-1	NA	NA	NA	NA
AZY08886.1\|3008810_3009092_+	hypothetical protein	NA	NA	NA	NA
AZY08887.1\|3009108_3009969_-	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AZY08888.1\|3009965_3010301_-	hypothetical protein	NA	NA	NA	NA
AZY08889.1\|3010354_3011005_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
AZY08890.1\|3012685_3013630_-	hypothetical protein	NA	NA	NA	NA
AZY08891.1\|3013675_3013993_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZY08892.1\|3013995_3014934_-	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AZY08893.1\|3015111_3015597_+	N-acetyltransferase	NA	NA	NA	NA
AZY08894.1\|3015615_3016164_+	damage-inducible protein DinB	NA	NA	NA	NA
AZY08895.1\|3016440_3017574_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

3029181 : 3101675

Bacillus_virus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08904.1\|3029181_3030132_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08905.1\|3030174_3031350_+	flagellin FliC	NA	NA	NA	NA
AZY08906.1\|3031571_3033362_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AZY08907.1\|3033374_3035036_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AZY08908.1\|3035048_3037754_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AZY08909.1\|3038046_3039801_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AZY08910.1\|3039797_3040424_+	DNA-binding response regulator	NA	NA	NA	NA
AZY08911.1\|3040420_3041272_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AZY08912.1\|3041347_3043462_+	M3 family peptidase	NA	NA	NA	NA
AZY08913.1\|3043612_3044263_+	SCO family protein	NA	NA	NA	NA
AZY08914.1\|3044408_3044660_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AZY08915.1\|3044729_3046112_-	multidrug transporter	NA	NA	NA	NA
AZY08916.1\|3046108_3049288_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AZY10014.1\|3050095_3051013_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY08917.1\|3051064_3051796_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AZY08918.1\|3051855_3052428_+	chorismate--pyruvate lyase	NA	NA	NA	NA
AZY10015.1\|3053936_3054953_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AZY08919.1\|3055090_3056140_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AZY08920.1\|3056244_3057195_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08921.1\|3057290_3058016_-	CoA pyrophosphatase	NA	NA	NA	NA
AZY08922.1\|3058226_3058607_-	50S ribosomal protein L19	NA	NA	NA	NA
AZY08923.1\|3058912_3059785_+	multidrug DMT transporter permease	NA	NA	NA	NA
AZY08924.1\|3059792_3060173_-	hypothetical protein	NA	NA	NA	NA
AZY08925.1\|3060326_3061601_-	radical SAM protein	NA	NA	NA	NA
AZY10016.1\|3063088_3063997_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
AZY08926.1\|3064794_3065859_-	sulfate/thiosulfate import ATP-binding protein CysA	G3M9Y6	Bacillus_virus	3.8e-24	30.3
AZY08927.1\|3067695_3068730_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY08928.1\|3068919_3069561_-	peroxiredoxin	NA	NA	NA	NA
AZY08929.1\|3069643_3071470_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AZY08930.1\|3071713_3072643_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
AZY08931.1\|3072642_3073392_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
AZY08932.1\|3073463_3074378_-	deacetylase	A0A2K9KZC4	Tupanvirus	9.8e-45	34.7
AZY08933.1\|3074397_3075543_+	lytic murein transglycosylase B	NA	NA	NA	NA
AZY08934.1\|3075603_3076515_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	8.0e-47	38.8
AZY08935.1\|3076595_3077546_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08936.1\|3077644_3078229_-	DUF655 domain-containing protein	NA	NA	NA	NA
AZY08937.1\|3078263_3079253_-	ADP-L-glycero-D-mannoheptose-6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AZY08938.1\|3079249_3080191_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AZY08939.1\|3080187_3081408_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AZY08940.1\|3081450_3081765_-	DUF1049 domain-containing protein	NA	NA	NA	NA
AZY08941.1\|3081956_3082316_-	integration host factor subunit beta	NA	NA	NA	NA
AZY08942.1\|3082317_3084048_-	30S ribosomal protein S1	NA	NA	NA	NA
AZY08943.1\|3084220_3084892_-	cytidylate kinase	NA	NA	NA	NA
AZY08944.1\|3084906_3086235_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AZY08945.1\|3086231_3087131_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AZY08946.1\|3087217_3088303_-	prephenate dehydratase	NA	NA	NA	NA
AZY08947.1\|3088295_3089429_-	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AZY08948.1\|3089428_3092110_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AZY08949.1\|3092480_3093062_+	OmpA family protein	NA	NA	NA	NA
AZY08950.1\|3093139_3093913_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AZY08951.1\|3093909_3094587_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AZY08952.1\|3094802_3095984_+	MFS transporter	NA	NA	NA	NA
AZY08953.1\|3096460_3096718_+	hypothetical protein	NA	NA	NA	NA
AZY08954.1\|3096756_3096939_+	addiction module toxin, HicA family	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AZY08955.1\|3096968_3097919_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY10017.1\|3098048_3098441_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AZY08956.1\|3098717_3099629_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AZY08957.1\|3099753_3100728_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY08958.1\|3100724_3101675_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_24

3115182 : 3168700

Bacillus_phage(33.33%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY08969.1\|3115182_3116133_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08970.1\|3116245_3116497_-	hypothetical protein	NA	NA	NA	NA
AZY08971.1\|3116690_3116906_-	hypothetical protein	NA	NA	NA	NA
AZY08972.1\|3117002_3118121_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
AZY08973.1\|3118240_3118453_-	hypothetical protein	NA	NA	NA	NA
AZY08974.1\|3118612_3118834_-	hypothetical protein	NA	NA	NA	NA
AZY08975.1\|3118886_3119837_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08976.1\|3121013_3122384_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AZY08977.1\|3122416_3123208_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY08978.1\|3123220_3124276_-	hypothetical protein	NA	NA	NA	NA
AZY08979.1\|3124301_3125177_-	hypothetical protein	NA	NA	NA	NA
AZY08980.1\|3125282_3125531_-	hypothetical protein	NA	NA	NA	NA
AZY08981.1\|3125565_3127020_-	carboxylase	NA	NA	NA	NA
AZY08982.1\|3127016_3127538_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AZY08983.1\|3127566_3128919_-	MmgE/PrpD family protein	NA	NA	NA	NA
AZY08984.1\|3129142_3132031_-	metal-dependent phosphohydrolase	NA	NA	NA	NA
AZY08985.1\|3134175_3135477_+	phospholipase	NA	NA	NA	NA
AZY08986.1\|3135491_3136208_-	flagellar brake protein	NA	NA	NA	NA
AZY08987.1\|3136489_3137170_+	DUF3313 domain-containing protein	NA	NA	NA	NA
AZY08988.1\|3137181_3137349_-	hypothetical protein	NA	NA	NA	NA
AZY08989.1\|3137457_3137610_-	hypothetical protein	NA	NA	NA	NA
AZY08990.1\|3137697_3138357_-	thiopurine S-methyltransferase	NA	NA	NA	NA
AZY08991.1\|3138737_3140588_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AZY08992.1\|3140584_3141535_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY08993.1\|3142698_3144414_+	acetolactate synthase, large subunit, biosynthetic type	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	3.1e-60	30.3
AZY08994.1\|3144424_3144916_+	acetolactate synthase small subunit	NA	NA	NA	NA
AZY08995.1\|3144988_3146005_+	ketol-acid reductoisomerase	NA	NA	NA	NA
AZY08996.1\|3146172_3146952_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AZY08997.1\|3146970_3147498_-	lipoprotein	NA	NA	NA	NA
AZY08998.1\|3147496_3147703_+	hypothetical protein	NA	NA	NA	NA
AZY08999.1\|3147791_3148061_+	30S ribosomal protein S15	NA	NA	NA	NA
AZY09000.1\|3148151_3150311_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
AZY09001.1\|3150431_3151151_+	lipoprotein	NA	NA	NA	NA
AZY09002.1\|3151147_3152098_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09003.1\|3152238_3153456_+	threonine ammonia-lyase	NA	NA	NA	NA
AZY09004.1\|3153449_3154061_-	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AZY09005.1\|3154694_3155672_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AZY09006.1\|3155815_3156562_+	triose-phosphate isomerase	NA	NA	NA	NA
AZY09007.1\|3156583_3157030_+	preprotein translocase subunit SecG	NA	NA	NA	NA
AZY09008.1\|3157817_3160049_+\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AZY09009.1\|3160071_3160872_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY09010.1\|3161153_3162386_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AZY09011.1\|3162496_3163486_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09012.1\|3163516_3164905_+	MmgE/PrpD family protein	NA	NA	NA	NA
AZY09013.1\|3166503_3167487_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY10019.1\|3167683_3168700_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3233158 : 3306320

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY09066.1\|3233158_3234109_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09067.1\|3234105_3235125_-	fructose 1,6-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AZY09068.1\|3235134_3237843_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AZY09069.1\|3237990_3238647_+	DUF4136 domain-containing protein	NA	NA	NA	NA
AZY09070.1\|3238745_3239696_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09071.1\|3239801_3240737_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
AZY09072.1\|3240936_3242631_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AZY09073.1\|3242665_3243592_+	VOC family protein	NA	NA	NA	NA
AZY10023.1\|3243660_3244758_+	hypothetical protein	NA	NA	NA	NA
AZY09074.1\|3244776_3245640_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AZY09075.1\|3245651_3246434_+	ABC transporter permease	NA	NA	NA	NA
AZY09076.1\|3246430_3247549_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AZY09077.1\|3247545_3249078_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AZY09078.1\|3249118_3250126_+	zinc-binding dehydrogenase	NA	NA	NA	NA
AZY09079.1\|3250270_3250993_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY09080.1\|3251008_3252031_-	autotransporter domain-containing protein	NA	NA	NA	NA
AZY09081.1\|3252347_3253082_-	GntR family transcriptional regulator	NA	NA	NA	NA
AZY09082.1\|3253166_3254912_+	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AZY09083.1\|3254908_3255661_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AZY09084.1\|3255705_3256662_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09085.1\|3256750_3257317_+	hypothetical protein	NA	NA	NA	NA
AZY09086.1\|3257324_3258185_-	aminotransferase	NA	NA	NA	NA
AZY09087.1\|3258214_3258958_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.4
AZY09088.1\|3258974_3259658_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY09089.1\|3260495_3261410_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY09090.1\|3261474_3262383_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY09091.1\|3262473_3263898_-	protein CyaE	NA	NA	NA	NA
AZY09092.1\|3263899_3265222_-	protein CyaD	NA	NA	NA	NA
AZY09093.1\|3265218_3267357_-	cyclolysin secretion/processing ATP-binding protein CyaB	W8CYL7	Bacillus_phage	2.7e-45	29.2
AZY09094.1\|3267434_3272555_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA
AZY10024.1\|3272741_3272921_-	hypothetical protein	NA	NA	NA	NA
AZY09095.1\|3273003_3273591_+	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA
AZY09096.1\|3273606_3275088_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AZY09097.1\|3275142_3276996_-	hypothetical protein	NA	NA	NA	NA
AZY09098.1\|3277258_3278596_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AZY09099.1\|3278630_3280628_-	hydantoin utilization protein B	NA	NA	NA	NA
AZY09100.1\|3280645_3282694_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AZY09101.1\|3282824_3283691_+	LysR family transcriptional regulator	NA	NA	NA	NA
AZY09102.1\|3283959_3284925_-	octaprenyl diphosphate synthase	NA	NA	NA	NA
AZY09103.1\|3285039_3286188_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AZY09104.1\|3286612_3286924_+	50S ribosomal protein L21	NA	NA	NA	NA
AZY09105.1\|3286957_3287218_+	50S ribosomal protein L27	NA	NA	NA	NA
AZY09106.1\|3287367_3288501_+	GTPase ObgE	NA	NA	NA	NA
AZY09107.1\|3288571_3289708_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AZY09108.1\|3289873_3290668_-	DNA-binding response regulator	NA	NA	NA	NA
AZY09109.1\|3290730_3291174_+	transcriptional regulator	NA	NA	NA	NA
AZY09110.1\|3291289_3292240_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09111.1\|3292226_3292415_-	hypothetical protein	NA	NA	NA	NA
AZY09112.1\|3292362_3292770_+	XRE family transcriptional regulator	NA	NA	NA	NA
AZY09113.1\|3292842_3295038_+	DNA methylase	NA	NA	NA	NA
AZY09114.1\|3295259_3296210_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09115.1\|3296169_3296694_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AZY09116.1\|3296825_3297797_+	hypothetical protein	NA	NA	NA	NA
AZY10025.1\|3297916_3300361_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AZY09117.1\|3300376_3300967_-	polyisoprenoid-binding protein	NA	NA	NA	NA
AZY09118.1\|3301210_3302161_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09119.1\|3302318_3303584_-	saccharopine dehydrogenase	NA	NA	NA	NA
AZY09120.1\|3303617_3304715_-	carboxynorspermidine decarboxylase	NA	NA	NA	NA
AZY09121.1\|3305369_3306320_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3317607 : 3417720

109

uncultured_Caudovirales_phage(13.79%)

transposase,tRNA,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY09132.1\|3317607_3318558_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09133.1\|3319289_3319667_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
AZY09134.1\|3319651_3320353_-	hypothetical protein	NA	NA	NA	NA
AZY09135.1\|3320496_3321189_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AZY09136.1\|3321188_3322292_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AZY09137.1\|3322401_3324774_+	LPS-assembly protein LptD	NA	NA	NA	NA
AZY09138.1\|3324770_3326330_+	chaperone SurA	NA	NA	NA	NA
AZY09139.1\|3326354_3327152_+	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA
AZY09140.1\|3327183_3328329_-	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
AZY09141.1\|3328433_3329876_+	pyruvate kinase	NA	NA	NA	NA
AZY10026.1\|3329878_3330967_-	hypothetical protein	NA	NA	NA	NA
AZY09142.1\|3333245_3334196_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09143.1\|3334182_3334401_-	hypothetical protein	NA	NA	NA	NA
AZY09144.1\|3335325_3335883_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09145.1\|3335858_3336209_-	hypothetical protein	NA	NA	NA	NA
AZY09146.1\|3336377_3337172_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AZY09147.1\|3337168_3338218_-	iron ABC transporter permease	NA	NA	NA	NA
AZY09148.1\|3338217_3338907_-	tol-pal system protein YbgF	NA	NA	NA	NA
AZY09149.1\|3338993_3339491_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AZY09150.1\|3339522_3340839_-	protein TolB	NA	NA	NA	NA
AZY09151.1\|3340855_3341830_-	cell envelope integrity protein TolA	NA	NA	NA	NA
AZY09152.1\|3341866_3342325_-	protein TolR	NA	NA	NA	NA
AZY09153.1\|3342324_3343005_-	protein TolQ	NA	NA	NA	NA
AZY09154.1\|3343007_3343436_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AZY09155.1\|3343488_3345219_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AZY09156.1\|3345284_3345857_+	RNA pyrophosphohydrolase	NA	NA	NA	NA
AZY09157.1\|3345837_3346524_+	DNA-binding response regulator	NA	NA	NA	NA
AZY09158.1\|3346879_3347551_+	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AZY09159.1\|3347557_3347758_-	hypothetical protein	NA	NA	NA	NA
AZY09160.1\|3348100_3348382_+	hypothetical protein	NA	NA	NA	NA
AZY09161.1\|3348378_3348912_-	DUF2514 domain-containing protein	NA	NA	NA	NA
AZY09162.1\|3348893_3349445_-	lysozyme	NA	NA	NA	NA
AZY09163.1\|3349423_3349666_-	hypothetical protein	NA	NA	NA	NA
AZY09164.1\|3349670_3350483_-	hypothetical protein	NA	NA	NA	NA
AZY09165.1\|3350482_3350746_-	hypothetical protein	NA	NA	NA	NA
AZY09166.1\|3350964_3351381_-	hypothetical protein	NA	NA	NA	NA
AZY09167.1\|3351385_3355342_-	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AZY09168.1\|3355334_3355724_-	hypothetical protein	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AZY09169.1\|3355720_3356254_-	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AZY09170.1\|3356321_3356681_-	hypothetical protein	NA	NA	NA	NA
AZY09171.1\|3356690_3359303_-\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AZY09172.1\|3359328_3359619_-	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AZY09173.1\|3359636_3359966_-	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AZY09174.1\|3359975_3360494_-\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AZY09175.1\|3360748_3361249_-	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AZY09176.1\|3361256_3361679_-	hypothetical protein	NA	NA	NA	NA
AZY09177.1\|3361675_3362074_-	hypothetical protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AZY09178.1\|3362070_3362466_-	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AZY09179.1\|3362465_3362666_-	hypothetical protein	NA	NA	NA	NA
AZY09180.1\|3362667_3363150_-	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AZY09181.1\|3363212_3363464_-	hypothetical protein	NA	NA	NA	NA
AZY09182.1\|3363473_3364121_-	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AZY09183.1\|3364138_3365089_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09184.1\|3365517_3366120_-	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AZY09185.1\|3366242_3366485_-	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AZY10027.1\|3366490_3367546_-	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AZY09186.1\|3367574_3368993_-	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AZY09187.1\|3368995_3370273_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AZY09188.1\|3370259_3370709_-\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AZY09189.1\|3371384_3372335_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09190.1\|3372352_3372574_+	hypothetical protein	NA	NA	NA	NA
AZY09191.1\|3372588_3373287_+	hypothetical protein	NA	NA	NA	NA
AZY09192.1\|3373279_3373600_+	hypothetical protein	NA	NA	NA	NA
AZY10028.1\|3374079_3374691_+	LexA family transcriptional repressor	NA	NA	NA	NA
AZY09193.1\|3374756_3374969_+	hypothetical protein	NA	NA	NA	NA
AZY09194.1\|3375220_3376171_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09195.1\|3376269_3377343_-	hypothetical protein	NA	NA	NA	NA
AZY09196.1\|3377510_3378305_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY09197.1\|3378344_3378869_-	DUF934 domain-containing protein	NA	NA	NA	NA
AZY09198.1\|3378861_3380604_-	sulfite reductase	NA	NA	NA	NA
AZY09199.1\|3380813_3381572_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AZY09200.1\|3381574_3382282_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AZY09201.1\|3382298_3383180_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY09202.1\|3383190_3383949_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY10029.1\|3383917_3384673_+	hypothetical protein	NA	NA	NA	NA
AZY09203.1\|3384742_3386161_+	amidase	NA	NA	NA	NA
AZY09204.1\|3386182_3386833_-	carbonic anhydrase	NA	NA	NA	NA
AZY09205.1\|3386966_3387302_-	ASCH domain-containing protein	NA	NA	NA	NA
AZY09206.1\|3387390_3388341_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09207.1\|3388417_3390238_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AZY09208.1\|3390242_3391316_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AZY09209.1\|3391438_3392407_+	threonine/serine dehydratase	NA	NA	NA	NA
AZY09210.1\|3392480_3393392_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AZY09211.1\|3393410_3393983_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AZY09212.1\|3394063_3394612_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AZY09213.1\|3394611_3396201_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AZY09214.1\|3396270_3396510_-	Fis family transcriptional regulator	NA	NA	NA	NA
AZY09215.1\|3396550_3397582_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AZY09216.1\|3397641_3398823_-	monooxygenase	NA	NA	NA	NA
AZY09217.1\|3398919_3399372_+	hypothetical protein	NA	NA	NA	NA
AZY09218.1\|3399381_3400722_-	peptidase M24 family protein	NA	NA	NA	NA
AZY09219.1\|3401038_3402076_+	hypothetical protein	NA	NA	NA	NA
AZY09220.1\|3402457_3402817_+	hypothetical protein	NA	NA	NA	NA
AZY10030.1\|3402900_3403842_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09221.1\|3403916_3404867_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09222.1\|3405160_3406255_+	porin	NA	NA	NA	NA
AZY09223.1\|3406336_3407218_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AZY09224.1\|3407239_3408079_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AZY09225.1\|3408154_3409672_+	peptidase	NA	NA	NA	NA
AZY09226.1\|3409768_3410869_-	alpha/beta hydrolase	NA	NA	NA	NA
AZY09227.1\|3410885_3411308_-	DUF4440 domain-containing protein	NA	NA	NA	NA
AZY09228.1\|3411330_3411543_-	zinc-finger domain-containing protein	NA	NA	NA	NA
AZY09229.1\|3411589_3412510_-	branched-chain amino acid transaminase	NA	NA	NA	NA
AZY10031.1\|3412773_3413442_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AZY09230.1\|3413444_3413774_+	AzlD domain-containing protein	NA	NA	NA	NA
AZY09231.1\|3413980_3415414_+	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AZY09232.1\|3415425_3415809_-	thioredoxin	NA	NA	NA	NA
AZY09233.1\|3415870_3416671_+	hypothetical protein	NA	NA	NA	NA
AZY09234.1\|3416769_3417720_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_27

3704336 : 3734322

Streptococcus_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY09482.1\|3704336_3705287_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09483.1\|3705386_3706337_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09484.1\|3706333_3706969_-	transporter	NA	NA	NA	NA
AZY09485.1\|3707098_3707998_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA
AZY09486.1\|3708093_3708585_+	copper chaperone PCu(A)C	NA	NA	NA	NA
AZY09487.1\|3708631_3709597_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09488.1\|3710730_3711972_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AZY09489.1\|3712085_3713102_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AZY09490.1\|3713136_3713613_-	hypothetical protein	NA	NA	NA	NA
AZY09491.1\|3713755_3714664_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AZY09492.1\|3714777_3715890_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AZY09493.1\|3715990_3716524_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AZY09494.1\|3716612_3717863_+	kynureninase	NA	NA	NA	NA
AZY09495.1\|3717964_3718477_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AZY09496.1\|3718382_3718589_+	hypothetical protein	NA	NA	NA	NA
AZY09497.1\|3718575_3719526_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09498.1\|3719591_3720530_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AZY09499.1\|3720552_3721179_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
AZY09500.1\|3721175_3721832_-	HAD family hydrolase	NA	NA	NA	NA
AZY09501.1\|3721828_3722431_-	hypothetical protein	NA	NA	NA	NA
AZY09502.1\|3722437_3723064_-	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	1.5e-07	23.3
AZY09503.1\|3723205_3723775_+	bacterioferritin	NA	NA	NA	NA
AZY09504.1\|3723845_3725165_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AZY09505.1\|3725271_3725463_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AZY09506.1\|3725714_3727004_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AZY09507.1\|3727158_3728154_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09508.1\|3728238_3728913_+	GntR family transcriptional regulator	NA	NA	NA	NA
AZY09509.1\|3728909_3729860_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09510.1\|3729846_3730029_-	hypothetical protein	NA	NA	NA	NA
AZY09511.1\|3730021_3731263_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AZY09512.1\|3731259_3732204_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AZY09513.1\|3732322_3733273_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09514.1\|3733371_3734322_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

3754491 : 3789153

Burkholderia_phage(11.11%)

transposase,integrase

attL 3751078:3751095|attR 3794657:3794674

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3751078:3751095	attL	NA	NA	NA	NA
AZY09532.1\|3754491_3755442_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09533.1\|3755477_3755945_+	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AZY09534.1\|3756178_3756556_+	hypothetical protein	NA	NA	NA	NA
AZY09535.1\|3756552_3756735_+	hypothetical protein	NA	NA	NA	NA
AZY09536.1\|3756738_3757725_+	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AZY09537.1\|3757721_3758369_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AZY09538.1\|3758426_3758954_+	hypothetical protein	NA	NA	NA	NA
AZY09539.1\|3758987_3760175_+	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AZY09540.1\|3760164_3760527_+	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.8e-13	47.9
AZY09541.1\|3760519_3760639_+	hypothetical protein	NA	NA	NA	NA
AZY09542.1\|3760639_3760840_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AZY09543.1\|3760836_3761826_-\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AZY09544.1\|3763312_3765283_-	DUF3120 domain-containing protein	NA	NA	NA	NA
AZY09545.1\|3765524_3765923_+	hypothetical protein	NA	NA	NA	NA
AZY09546.1\|3765931_3766855_-	LysR family transcriptional regulator	NA	NA	NA	NA
AZY09547.1\|3767312_3768263_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09548.1\|3768493_3770185_-	membrane protein insertase YidC	NA	NA	NA	NA
AZY09549.1\|3770233_3770506_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AZY09550.1\|3770502_3770874_-	ribonuclease P protein component	NA	NA	NA	NA
AZY09551.1\|3770969_3771104_-	50S ribosomal protein L34	NA	NA	NA	NA
AZY09552.1\|3771509_3772919_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
AZY09553.1\|3772915_3774031_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.6e-41	32.6
AZY09554.1\|3774125_3776579_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AZY09555.1\|3776697_3777489_-	IclR family transcriptional regulator	NA	NA	NA	NA
AZY09556.1\|3777608_3779036_+	amidase	NA	NA	NA	NA
AZY10042.1\|3779074_3780046_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09557.1\|3780464_3781628_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AZY09558.1\|3781715_3782561_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY09559.1\|3784117_3785068_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09560.1\|3785622_3785997_-	MerR family transcriptional regulator	NA	NA	NA	NA
AZY09561.1\|3786071_3787130_+	Zn-dependent hydrolase	NA	NA	NA	NA
AZY09562.1\|3787153_3788104_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09563.1\|3788202_3789153_-\|transposase	IS481 family transposase	NA	NA	NA	NA
3794657:3794674	attR	NA	NA	NA	NA

DBSCAN-SWA_29

4004413 : 4069325

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AZY09760.1\|4004413_4004899_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09761.1\|4005117_4006098_+	protein BugT	NA	NA	NA	NA
AZY09762.1\|4006364_4007174_+	Pertussis toxin subunit 1	NA	NA	NA	NA
AZY09763.1\|4007213_4007894_+	Pertussis toxin subunit 2	NA	NA	NA	NA
AZY09764.1\|4007887_4008346_+	pertussis toxin subunit 4	NA	NA	NA	NA
AZY09765.1\|4008357_4008720_+	Pertussis toxin subunit 5	NA	NA	NA	NA
AZY09766.1\|4008802_4009486_+	Pertussis toxin subunit 3	NA	NA	NA	NA
AZY09767.1\|4009541_4009850_+	type IV secretion protein A	NA	NA	NA	NA
AZY09768.1\|4009868_4010183_+	type IV secretion protein B	NA	NA	NA	NA
AZY09769.1\|4010179_4012654_+	type IV secretion system protein PtlC	NA	NA	NA	NA
AZY09770.1\|4012661_4014053_+	type IV secretion system protein PtlD	NA	NA	NA	NA
AZY09771.1\|4014049_4014235_+	type IV secretion protein I	NA	NA	NA	NA
AZY09772.1\|4014213_4014915_+	type IV secretion protein E	NA	NA	NA	NA
AZY09773.1\|4014911_4015733_+	type IV secretion system protein PtlF	NA	NA	NA	NA
AZY10054.1\|4015713_4016838_+	type IV secretion system protein PtlG	NA	NA	NA	NA
AZY09774.1\|4016830_4017850_+	type IV secretion protein H	NA	NA	NA	NA
AZY09775.1\|4018055_4019090_-	EamA/RhaT family transporter	NA	NA	NA	NA
AZY10055.1\|4019190_4019982_+	AraC family transcriptional regulator	NA	NA	NA	NA
AZY09776.1\|4020064_4020439_+	DUF1232 domain-containing protein	NA	NA	NA	NA
AZY09777.1\|4020416_4021826_+	DUF2868 domain-containing protein	NA	NA	NA	NA
AZY09778.1\|4021818_4023201_+	DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	9.9e-57	38.9
AZY09779.1\|4023535_4025140_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AZY09780.1\|4025175_4026189_+	ABC transporter permease	NA	NA	NA	NA
AZY09781.1\|4026199_4027126_+	ABC transporter permease	NA	NA	NA	NA
AZY09782.1\|4027516_4028467_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09783.1\|4028636_4029863_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA
AZY09784.1\|4030062_4030929_+	DUF815 domain-containing protein	NA	NA	NA	NA
AZY09785.1\|4030921_4031884_+	NUDIX domain-containing protein	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
AZY09786.1\|4031984_4032935_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09787.1\|4033033_4033984_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09788.1\|4034082_4035033_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AZY09789.1\|4035029_4036523_-	RND transporter	NA	NA	NA	NA
AZY09790.1\|4036519_4039627_-	multidrug transporter subunit MdtC	NA	NA	NA	NA
AZY09791.1\|4039623_4042692_-	multidrug transporter subunit MdtB	NA	NA	NA	NA
AZY09792.1\|4042688_4043939_-	multidrug transporter subunit MdtA	NA	NA	NA	NA
AZY09793.1\|4044119_4044881_-	cell division protein ZapD	NA	NA	NA	NA
AZY09794.1\|4044913_4045564_-	dephospho-CoA kinase	NA	NA	NA	NA
AZY09795.1\|4045566_4046406_-	prepilin peptidase	NA	NA	NA	NA
AZY09796.1\|4046646_4047390_+	hypothetical protein	NA	NA	NA	NA
AZY09797.1\|4047472_4047820_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AZY09798.1\|4047917_4048760_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AZY09799.1\|4048804_4049692_-	segregation/condensation protein A	NA	NA	NA	NA
AZY09800.1\|4049718_4049907_-	DUF3460 domain-containing protein	NA	NA	NA	NA
AZY09801.1\|4050004_4051462_+	MFS transporter	NA	NA	NA	NA
AZY09802.1\|4051448_4052975_+	glycerol kinase	NA	NA	NA	NA
AZY09803.1\|4052993_4053461_-	hypothetical protein	NA	NA	NA	NA
AZY09804.1\|4053460_4054483_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AZY09805.1\|4054603_4055344_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	39.7
AZY09806.1\|4055398_4056499_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY09807.1\|4056500_4057691_-	amino acid ABC transporter permease	NA	NA	NA	NA
AZY09808.1\|4057810_4058827_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
AZY09809.1\|4059145_4059817_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	9.5e-29	38.2
AZY09810.1\|4059813_4060722_+	ABC transporter permease	NA	NA	NA	NA
AZY09811.1\|4060933_4061581_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
AZY09812.1\|4065432_4066509_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AZY09813.1\|4066519_4067329_-	transcriptional regulator	NA	NA	NA	NA
AZY09814.1\|4067418_4068192_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AZY09815.1\|4068374_4069325_+\|transposase	IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP025382

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection