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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025378 Bordetella pertussis strain I692 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 27 0

Results visualization

1. CP025378
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025378_1 250589-250673 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025378_2 433081-433174 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025378_3 997403-997497 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025378_4 3430391-3430500 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 70443 60 Natrialba_phage(12.5%) transposase,protease,tRNA NA
DBSCAN-SWA_2 77633 : 136107 54 Planktothrix_phage(22.22%) transposase,tRNA NA
DBSCAN-SWA_3 164892 : 225402 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_4 233334 : 287971 49 Bacillus_phage(25.0%) transposase,protease,tRNA NA
DBSCAN-SWA_5 391904 : 449413 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_6 621849 : 722313 111 uncultured_Caudovirales_phage(13.79%) transposase,terminase,tRNA,tail NA
DBSCAN-SWA_7 855146 : 904410 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_8 914022 : 978962 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 998367 : 1061518 53 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_10 1067502 : 1135664 54 uncultured_Mediterranean_phage(25.0%) transposase,holin,tRNA NA
DBSCAN-SWA_11 1317953 : 1386440 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1446931 : 1502419 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_13 1541742 : 1599824 60 Planktothrix_phage(15.38%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1655028 : 1726182 54 Ectocarpus_siliculosus_virus(10.0%) transposase NA
DBSCAN-SWA_15 1746973 : 1808321 52 uncultured_Caudovirales_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_16 1989506 : 2059158 56 Staphylococcus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_17 2070654 : 2120050 44 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_18 2131254 : 2264228 113 Klosneuvirus(12.5%) transposase,protease,tRNA NA
DBSCAN-SWA_19 2685967 : 2726635 44 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_20 2782100 : 2854970 59 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_21 2858113 : 2924922 48 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_22 2955308 : 2994497 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_23 3183417 : 3244446 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_24 3266171 : 3304586 36 Tupanvirus(16.67%) transposase,holin NA
DBSCAN-SWA_25 3379993 : 3433734 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_26 3439889 : 3499189 48 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_27 3514127 : 3572200 47 Planktothrix_phage(12.5%) transposase,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage