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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025370 Bordetella pertussis strain I120 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 25 0

Results visualization

1. CP025370
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025370_1 250590-250674 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025370_2 432033-432126 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025370_3 996356-996450 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025370_4 3427248-3427357 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) tRNA,protease,transposase NA
DBSCAN-SWA_2 164893 : 301502 117 Klosneuvirus(10.53%) tRNA,protease,transposase NA
DBSCAN-SWA_3 390856 : 448365 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_4 636791 : 736903 108 uncultured_Caudovirales_phage(13.33%) tRNA,terminase,transposase,tail NA
DBSCAN-SWA_5 748190 : 821352 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_6 854099 : 903363 40 Vibrio_phage(33.33%) holin,transposase NA
DBSCAN-SWA_7 912975 : 977915 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_8 997320 : 1060479 52 Enterococcus_phage(16.67%) transposase NA
DBSCAN-SWA_9 1066463 : 1134625 54 uncultured_Mediterranean_phage(25.0%) tRNA,holin,transposase NA
DBSCAN-SWA_10 1316914 : 1385401 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_11 1445892 : 1501380 56 Mollivirus(16.67%) protease,transposase NA
DBSCAN-SWA_12 1540703 : 1598785 60 Planktothrix_phage(15.38%) tRNA,protease,transposase NA
DBSCAN-SWA_13 1700112 : 1763949 53 Brazilian_cedratvirus(25.0%) transposase NA
DBSCAN-SWA_14 1988463 : 2058115 56 Staphylococcus_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_15 2069611 : 2119006 44 Erysipelothrix_phage(16.67%) transposase NA
DBSCAN-SWA_16 2130210 : 2263184 113 Klosneuvirus(12.5%) tRNA,protease,transposase NA
DBSCAN-SWA_17 2684924 : 2725593 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_18 2781058 : 2853928 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_19 2857071 : 2923882 49 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_20 2954268 : 2990543 35 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_21 3231468 : 3278037 45 Erwinia_phage(10.0%) holin,transposase NA
DBSCAN-SWA_22 3287964 : 3327964 28 Mycobacterium_phage(50.0%) tRNA,protease,integrase,transposase attL 3310760:3310778|attR 3330648:3330666
DBSCAN-SWA_23 3396712 : 3441784 38 Staphylococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_24 3459528 : 3511935 47 Acinetobacter_phage(37.5%) tRNA,transposase NA
DBSCAN-SWA_25 3529053 : 3585328 47 Catovirus(11.11%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage