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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025345 Bordetella pertussis strain C871 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 25 0

Results visualization

1. CP025345
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025345_1 250592-250676 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025345_2 432035-432128 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025345_3 996330-996424 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP025345_4 3424076-3424185 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 122073 110 Planktothrix_phage(16.67%) tRNA,transposase,protease NA
DBSCAN-SWA_2 164894 : 225405 51 Diachasmimorpha_longicaudata_entomopoxvirus(11.11%) tRNA,transposase,protease NA
DBSCAN-SWA_3 233337 : 286925 48 Bacillus_phage(25.0%) tRNA,transposase,protease NA
DBSCAN-SWA_4 390858 : 448367 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 620802 : 721266 111 uncultured_Caudovirales_phage(13.79%) tail,tRNA,transposase,terminase NA
DBSCAN-SWA_6 748191 : 821353 58 Streptococcus_phage(16.67%) transposase NA
DBSCAN-SWA_7 854100 : 903342 40 Vibrio_phage(33.33%) transposase,holin NA
DBSCAN-SWA_8 912954 : 977894 60 Bacillus_phage(18.18%) transposase NA
DBSCAN-SWA_9 997294 : 1048259 40 Enterococcus_phage(25.0%) transposase NA
DBSCAN-SWA_10 1060477 : 1126492 53 uncultured_Mediterranean_phage(33.33%) tRNA,transposase,holin NA
DBSCAN-SWA_11 1316881 : 1385368 58 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1445859 : 1501347 56 Mollivirus(16.67%) transposase,protease NA
DBSCAN-SWA_13 1914635 : 1969871 50 Lake_Baikal_phage(25.0%) transposase,protease NA
DBSCAN-SWA_14 2294788 : 2356136 52 Yellowstone_lake_phycodnavirus(12.5%) tRNA,transposase NA
DBSCAN-SWA_15 2376927 : 2448081 54 Tetraselmis_virus(10.0%) transposase NA
DBSCAN-SWA_16 2489022 : 2550869 60 Planktothrix_phage(14.29%) tRNA,transposase,protease NA
DBSCAN-SWA_17 2681748 : 2722417 43 Salmonella_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_18 2777882 : 2850752 59 Moraxella_phage(16.67%) tRNA,transposase NA
DBSCAN-SWA_19 2853895 : 2920707 49 uncultured_Mediterranean_phage(28.57%) transposase,protease NA
DBSCAN-SWA_20 2951093 : 2990282 38 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_21 3228294 : 3272961 46 Erwinia_phage(16.67%) transposase,holin NA
DBSCAN-SWA_22 3284790 : 3324791 29 Mycobacterium_phage(50.0%) tRNA,integrase,transposase,protease attL 3307587:3307605|attR 3327475:3327493
DBSCAN-SWA_23 3373678 : 3427419 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3433574 : 3492874 48 Acinetobacter_phage(27.27%) tRNA,transposase NA
DBSCAN-SWA_25 3507812 : 3565885 47 Planktothrix_phage(12.5%) tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage