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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018035 Bordetella pertussis strain H782 chromosome, complete genome 4 crisprs csa3,cas3,DinG,DEDDh 0 0 29 0

Results visualization

1. CP018035
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018035_1 250587-250671 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018035_2 432029-432122 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018035_3 997393-997487 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP018035_4 3434557-3434666 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 64055 57 Natrialba_phage(12.5%) protease,transposase,tRNA NA
DBSCAN-SWA_2 69085 : 122073 53 Planktothrix_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_3 164890 : 301498 117 Klosneuvirus(10.53%) protease,transposase,tRNA NA
DBSCAN-SWA_4 390852 : 448361 50 Orpheovirus(14.29%) transposase NA
DBSCAN-SWA_5 590415 : 652654 56 uncultured_Mediterranean_phage(40.0%) transposase NA
DBSCAN-SWA_6 657978 : 704169 51 uncultured_Caudovirales_phage(18.18%) terminase,transposase,tail,tRNA NA
DBSCAN-SWA_7 710335 : 764264 47 Planktothrix_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_8 860837 : 914968 44 Vibrio_phage(25.0%) transposase,holin NA
DBSCAN-SWA_9 939467 : 1001616 57 Bacillus_virus(15.38%) transposase NA
DBSCAN-SWA_10 1047322 : 1117872 59 uncultured_Mediterranean_phage(30.0%) transposase,tRNA NA
DBSCAN-SWA_11 1318990 : 1384419 60 Planktothrix_phage(33.33%) transposase NA
DBSCAN-SWA_12 1492248 : 1554228 55 Planktothrix_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_13 1656062 : 1727168 55 Ectocarpus_siliculosus_virus(11.11%) transposase NA
DBSCAN-SWA_14 1748007 : 1809355 54 uncultured_Caudovirales_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_15 1927323 : 1998870 59 Faecalibacterium_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_16 2040326 : 2077806 36 Erysipelothrix_phage(100.0%) transposase NA
DBSCAN-SWA_17 2091012 : 2136374 47 Bacillus_phage(25.0%) transposase NA
DBSCAN-SWA_18 2202848 : 2268395 60 Lake_Baikal_phage(21.43%) protease,transposase,tRNA NA
DBSCAN-SWA_19 2353571 : 2427662 60 uncultured_Caudovirales_phage(10.0%) protease,transposase NA
DBSCAN-SWA_20 2689085 : 2729706 41 Salmonella_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_21 2785219 : 2858088 59 Moraxella_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_22 2861279 : 2928041 51 uncultured_Mediterranean_phage(28.57%) protease,transposase NA
DBSCAN-SWA_23 2950420 : 2997615 41 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_24 3186582 : 3247516 49 Xanthomonas_phage(50.0%) transposase NA
DBSCAN-SWA_25 3270613 : 3321159 40 Tupanvirus(14.29%) transposase,tRNA NA
DBSCAN-SWA_26 3384207 : 3437852 48 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_27 3444054 : 3503306 50 Acinetobacter_phage(27.27%) transposase,tRNA NA
DBSCAN-SWA_28 3518292 : 3576365 50 Catovirus(12.5%) holin,transposase,tRNA NA
DBSCAN-SWA_29 4030626 : 4084010 45 Planktothrix_phage(40.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage